View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2675_low_31 (Length: 251)
Name: NF2675_low_31
Description: NF2675
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2675_low_31 |
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Alignment Details
Target: chr2 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 27694789 - 27694935
Alignment:
| Q |
89 |
tgaaatgaaagacatgtgaggnnnnnnngcaaggaagatctagaacctcacttcaacgataagagacatccaaaatccccaaaccacacccaatcgttct |
188 |
Q |
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| T |
27694789 |
tgaaatgaaagacatgtaaggaaaaaaagcaaggaagatctagaacctcacttcaacgataagagacatccaaaatccccaaaccacacccaatcgttct |
27694888 |
T |
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| Q |
189 |
tcctttgatctttacgtccacatctttcttctatattcccccttcct |
235 |
Q |
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||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
27694889 |
tcctttgatctttacgtccacatctttcttctatattcccctttcct |
27694935 |
T |
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