View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2677_low_10 (Length: 249)
Name: NF2677_low_10
Description: NF2677
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2677_low_10 |
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Alignment Details
Target: chr4 (Bit Score: 235; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 43815489 - 43815727
Alignment:
| Q |
1 |
gtttgccttgtaattcttccatacctgatcaagtgatgacatgaacattttattagctgctaacaaaattcattaatgacaaaacaccgttatttaaggc |
100 |
Q |
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| T |
43815489 |
gtttgccttgtaattcttccatacctgatcaagtgatgacatgaacattttattagctgctaacaaaattcattaacgacaaaacaccgttatttaaggc |
43815588 |
T |
|
| Q |
101 |
ttgagtgagtgtaaatcttacattatggagtaccaaatttgaaccttgtggaaaaacaccgttatttttcccacaaacaatttcagtaaccaaaatacca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43815589 |
ttgagtgagtgtaaatcttacattatggagtaccaaatttgaaccttgtggaaaaacaccgttatttttcccacaaacaatttcagtaaccaaaatacca |
43815688 |
T |
|
| Q |
201 |
aaagcatatatatctgccttctctgtcagttgtcctttg |
239 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
43815689 |
aaagcatatatatctgccttctctgtcagttgtcctttg |
43815727 |
T |
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