View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2679_low_1 (Length: 872)

Name: NF2679_low_1
Description: NF2679
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2679_low_1
NF2679_low_1
[»] chr3 (46 HSPs)
chr3 (92-801)||(21872022-21872731)
chr3 (283-381)||(24624264-24624362)
chr3 (391-444)||(42084301-42084354)
chr3 (284-372)||(41164909-41164997)
chr3 (361-445)||(48364899-48364983)
chr3 (391-459)||(48397598-48397666)
chr3 (383-458)||(1816536-1816611)
chr3 (383-446)||(24887325-24887388)
chr3 (382-445)||(32555022-32555085)
chr3 (297-376)||(41724271-41724350)
chr3 (284-376)||(25182909-25182998)
chr3 (395-445)||(44061077-44061127)
chr3 (325-418)||(2100139-2100232)
chr3 (296-341)||(22667497-22667542)
chr3 (296-341)||(22724136-22724181)
chr3 (297-378)||(31710819-31710900)
chr3 (297-378)||(31711074-31711155)
chr3 (372-445)||(40122784-40122856)
chr3 (284-341)||(50211829-50211886)
chr3 (281-341)||(20210844-20210904)
chr3 (389-445)||(23315592-23315648)
chr3 (290-350)||(26542622-26542681)
chr3 (378-445)||(2201094-2201161)
chr3 (383-466)||(14145857-14145940)
chr3 (286-341)||(24158437-24158492)
chr3 (284-367)||(26320016-26320099)
chr3 (297-372)||(26330255-26330330)
chr3 (390-445)||(31337450-31337505)
chr3 (386-445)||(36646427-36646486)
chr3 (383-445)||(30956668-30956730)
chr3 (383-445)||(30972480-30972542)
chr3 (388-442)||(33405214-33405268)
chr3 (387-445)||(38462247-38462305)
chr3 (389-427)||(41057022-41057060)
chr3 (383-433)||(43875626-43875676)
chr3 (391-444)||(3467438-3467491)
chr3 (392-445)||(10101527-10101580)
chr3 (392-445)||(10212452-10212505)
chr3 (378-443)||(19679365-19679430)
chr3 (389-445)||(21865544-21865598)
chr3 (386-427)||(22214704-22214745)
chr3 (388-433)||(23249536-23249581)
chr3 (297-350)||(25129963-25130016)
chr3 (284-341)||(25447164-25447220)
chr3 (388-445)||(27792838-27792895)
chr3 (389-442)||(28306127-28306180)
[»] chr8 (47 HSPs)
chr8 (283-445)||(34770858-34771020)
chr8 (284-372)||(43368619-43368707)
chr8 (383-445)||(6509345-6509407)
chr8 (290-372)||(39881646-39881728)
chr8 (317-445)||(31915245-31915373)
chr8 (283-378)||(7714299-7714394)
chr8 (295-357)||(2364390-2364452)
chr8 (284-445)||(4763884-4764045)
chr8 (296-372)||(11376766-11376842)
chr8 (385-432)||(1561253-1561300)
chr8 (385-432)||(2091740-2091787)
chr8 (388-431)||(9834836-9834879)
chr8 (389-444)||(11376670-11376725)
chr8 (314-377)||(21130670-21130733)
chr8 (283-342)||(34849197-34849256)
chr8 (284-334)||(18331815-18331865)
chr8 (372-442)||(29973050-29973120)
chr8 (283-372)||(2487926-2488015)
chr8 (380-433)||(7645956-7646009)
chr8 (286-376)||(12361251-12361343)
chr8 (284-341)||(14926901-14926958)
chr8 (378-466)||(1470893-1470981)
chr8 (385-445)||(2093245-2093305)
chr8 (286-342)||(8535976-8536032)
chr8 (284-376)||(9700060-9700152)
chr8 (393-445)||(12361158-12361210)
chr8 (477-521)||(31167859-31167903)
chr8 (284-344)||(37353091-37353151)
chr8 (392-476)||(42597336-42597420)
chr8 (357-412)||(9912805-9912860)
chr8 (311-350)||(25881361-25881400)
chr8 (378-429)||(31884576-31884627)
chr8 (284-339)||(44236742-44236797)
chr8 (296-370)||(1058008-1058081)
chr8 (386-472)||(4558737-4558823)
chr8 (385-443)||(10474210-10474267)
chr8 (391-441)||(11059745-11059794)
chr8 (383-445)||(29592574-29592636)
chr8 (284-342)||(38602421-38602478)
chr8 (388-445)||(787153-787210)
chr8 (388-433)||(8062502-8062547)
chr8 (388-445)||(10437851-10437907)
chr8 (327-376)||(14949925-14949974)
chr8 (284-357)||(27119848-27119921)
chr8 (388-445)||(28784842-28784899)
chr8 (372-445)||(38537557-38537630)
chr8 (388-445)||(41336692-41336749)
[»] chr5 (39 HSPs)
chr5 (319-445)||(38047833-38047959)
chr5 (284-444)||(42646882-42647041)
chr5 (284-372)||(499650-499738)
chr5 (284-372)||(28982073-28982161)
chr5 (284-356)||(36796626-36796698)
chr5 (306-372)||(13781816-13781882)
chr5 (383-445)||(14295472-14295534)
chr5 (284-376)||(14331426-14331517)
chr5 (388-444)||(34205206-34205262)
chr5 (380-472)||(35960353-35960444)
chr5 (378-445)||(10272468-10272535)
chr5 (382-445)||(41277391-41277454)
chr5 (297-415)||(11095427-11095545)
chr5 (383-440)||(18543238-18543296)
chr5 (284-341)||(42034154-42034211)
chr5 (383-443)||(12975315-12975375)
chr5 (286-334)||(14706205-14706253)
chr5 (383-419)||(34117578-34117614)
chr5 (390-445)||(9927551-9927605)
chr5 (389-432)||(19138767-19138810)
chr5 (394-445)||(32059642-32059693)
chr5 (284-339)||(32194011-32194066)
chr5 (284-370)||(10640019-10640104)
chr5 (383-445)||(12425537-12425599)
chr5 (284-334)||(25705578-25705628)
chr5 (388-445)||(26209460-26209518)
chr5 (284-342)||(31208565-31208623)
chr5 (295-341)||(37968971-37969017)
chr5 (380-445)||(40335910-40335975)
chr5 (284-370)||(41419385-41419470)
chr5 (404-445)||(583836-583877)
chr5 (388-445)||(9202795-9202852)
chr5 (295-376)||(11457157-11457238)
chr5 (284-369)||(16937802-16937886)
chr5 (284-337)||(17369301-17369354)
chr5 (391-444)||(18857450-18857503)
chr5 (388-445)||(32172619-32172676)
chr5 (283-372)||(34736445-34736533)
chr5 (380-441)||(41016149-41016210)
[»] chr4 (58 HSPs)
chr4 (312-445)||(32920370-32920504)
chr4 (297-372)||(50298579-50298653)
chr4 (285-369)||(15173223-15173306)
chr4 (311-367)||(25497624-25497680)
chr4 (296-372)||(52172788-52172864)
chr4 (318-445)||(3549508-3549635)
chr4 (352-446)||(1408307-1408401)
chr4 (383-445)||(2996539-2996601)
chr4 (383-445)||(10192250-10192312)
chr4 (284-373)||(27123271-27123360)
chr4 (388-445)||(51630077-51630134)
chr4 (298-378)||(8328052-8328132)
chr4 (390-445)||(13949893-13949948)
chr4 (388-443)||(49219107-49219162)
chr4 (290-376)||(2996632-2996718)
chr4 (284-370)||(13126495-13126580)
chr4 (284-370)||(17822784-17822869)
chr4 (387-445)||(18630646-18630704)
chr4 (286-376)||(25896843-25896933)
chr4 (284-366)||(27043749-27043830)
chr4 (386-432)||(42866047-42866093)
chr4 (380-445)||(927442-927507)
chr4 (287-344)||(1017119-1017176)
chr4 (298-367)||(18628486-18628555)
chr4 (390-443)||(29778763-29778816)
chr4 (383-432)||(35517175-35517224)
chr4 (372-445)||(54325068-54325141)
chr4 (283-376)||(55870260-55870353)
chr4 (390-471)||(55870390-55870471)
chr4 (385-445)||(3175917-3175977)
chr4 (389-445)||(4071848-4071904)
chr4 (284-372)||(7367973-7368061)
chr4 (361-445)||(7730590-7730674)
chr4 (378-473)||(8422876-8422969)
chr4 (284-336)||(18512434-18512486)
chr4 (329-445)||(19429476-19429592)
chr4 (311-367)||(22523748-22523804)
chr4 (372-440)||(24091434-24091502)
chr4 (378-442)||(35958624-35958688)
chr4 (386-445)||(24370998-24371057)
chr4 (385-444)||(29263337-29263396)
chr4 (389-442)||(7368103-7368157)
chr4 (478-512)||(7730513-7730547)
chr4 (382-424)||(9841053-9841095)
chr4 (296-350)||(21157853-21157907)
chr4 (359-466)||(29373903-29374012)
chr4 (390-432)||(30207620-30207662)
chr4 (286-336)||(32420979-32421029)
chr4 (387-445)||(43372015-43372073)
chr4 (372-433)||(7694041-7694102)
chr4 (295-340)||(7731784-7731829)
chr4 (400-445)||(11917525-11917570)
chr4 (327-376)||(23819148-23819197)
chr4 (388-445)||(25885825-25885882)
chr4 (407-476)||(30024635-30024704)
chr4 (406-451)||(31038932-31038977)
chr4 (388-445)||(47119012-47119069)
chr4 (392-445)||(53626742-53626795)
[»] chr2 (58 HSPs)
chr2 (286-445)||(28803451-28803610)
chr2 (281-371)||(40943977-40944067)
chr2 (383-445)||(11513864-11513926)
chr2 (362-445)||(10143138-10143221)
chr2 (297-376)||(29430817-29430896)
chr2 (282-342)||(22878191-22878251)
chr2 (383-445)||(5043602-5043664)
chr2 (389-446)||(33931618-33931675)
chr2 (372-445)||(43141837-43141910)
chr2 (318-442)||(1318229-1318353)
chr2 (389-445)||(6993772-6993828)
chr2 (285-381)||(43456627-43456723)
chr2 (387-445)||(4090315-4090373)
chr2 (284-342)||(15370242-15370300)
chr2 (383-445)||(17952743-17952805)
chr2 (319-397)||(32837361-32837439)
chr2 (286-372)||(40158781-40158867)
chr2 (383-440)||(18066099-18066156)
chr2 (383-424)||(18179282-18179323)
chr2 (296-369)||(25609862-25609935)
chr2 (386-443)||(29935971-29936028)
chr2 (284-369)||(30331818-30331902)
chr2 (392-445)||(33942116-33942169)
chr2 (288-369)||(33981189-33981270)
chr2 (383-424)||(39983329-39983370)
chr2 (315-376)||(44606060-44606121)
chr2 (325-381)||(5902509-5902565)
chr2 (284-372)||(12313092-12313180)
chr2 (285-373)||(16503415-16503503)
chr2 (393-441)||(35755554-35755602)
chr2 (286-362)||(42852623-42852699)
chr2 (282-341)||(13866972-13867031)
chr2 (383-442)||(15866710-15866769)
chr2 (386-445)||(22681230-22681289)
chr2 (396-443)||(33944573-33944620)
chr2 (378-445)||(37292384-37292451)
chr2 (284-367)||(41170678-41170761)
chr2 (483-521)||(6772695-6772733)
chr2 (388-445)||(7103529-7103587)
chr2 (295-349)||(14277823-14277877)
chr2 (388-430)||(25800810-25800852)
chr2 (383-445)||(29316817-29316879)
chr2 (391-445)||(40145428-40145482)
chr2 (383-445)||(43199380-43199442)
chr2 (284-342)||(43199928-43199986)
chr2 (388-445)||(656824-656881)
chr2 (311-376)||(787391-787456)
chr2 (383-440)||(1625871-1625928)
chr2 (283-372)||(2964727-2964816)
chr2 (400-445)||(3423827-3423872)
chr2 (284-381)||(4350744-4350841)
chr2 (319-376)||(5759529-5759585)
chr2 (382-419)||(9886304-9886341)
chr2 (394-514)||(10150651-10150772)
chr2 (388-445)||(14666514-14666571)
chr2 (483-524)||(33197397-33197438)
chr2 (385-446)||(33256705-33256766)
chr2 (389-430)||(40279178-40279219)
[»] chr7 (41 HSPs)
chr7 (307-443)||(28340363-28340498)
chr7 (283-376)||(33894686-33894779)
chr7 (372-445)||(5006540-5006613)
chr7 (388-445)||(12110326-12110383)
chr7 (390-445)||(1417230-1417285)
chr7 (283-342)||(30751612-30751671)
chr7 (327-445)||(946718-946836)
chr7 (286-370)||(3836604-3836688)
chr7 (286-342)||(8427106-8427162)
chr7 (325-404)||(17759557-17759636)
chr7 (383-445)||(27548229-27548291)
chr7 (383-445)||(30456492-30456554)
chr7 (284-370)||(34035983-34036068)
chr7 (383-445)||(40689028-40689090)
chr7 (386-444)||(47046153-47046211)
chr7 (284-376)||(24048601-24048691)
chr7 (386-459)||(28340889-28340962)
chr7 (320-376)||(22388447-22388503)
chr7 (284-340)||(29363603-29363659)
chr7 (389-445)||(48157168-48157224)
chr7 (325-408)||(29574585-29574668)
chr7 (386-445)||(31338474-31338533)
chr7 (324-375)||(33933852-33933903)
chr7 (386-445)||(38010680-38010739)
chr7 (483-513)||(2221847-2221877)
chr7 (284-342)||(4970711-4970768)
chr7 (391-445)||(9527140-9527194)
chr7 (385-443)||(17989067-17989125)
chr7 (352-430)||(18350718-18350796)
chr7 (387-445)||(22759152-22759210)
chr7 (407-445)||(23918923-23918961)
chr7 (286-372)||(28727684-28727770)
chr7 (284-378)||(41040222-41040316)
chr7 (284-322)||(46609007-46609045)
chr7 (383-445)||(46825064-46825126)
chr7 (388-441)||(18516296-18516349)
chr7 (330-443)||(25422318-25422431)
chr7 (295-372)||(25670516-25670593)
chr7 (389-434)||(39518806-39518851)
chr7 (383-440)||(44821930-44821987)
chr7 (486-515)||(47046273-47046302)
[»] chr6 (48 HSPs)
chr6 (387-444)||(4006681-4006738)
chr6 (286-372)||(26559160-26559246)
chr6 (284-341)||(27894127-27894184)
chr6 (386-432)||(2727901-2727947)
chr6 (383-445)||(32386605-32386667)
chr6 (372-445)||(281879-281952)
chr6 (284-373)||(2460070-2460159)
chr6 (311-376)||(2732193-2732258)
chr6 (284-416)||(3525143-3525275)
chr6 (297-401)||(27857392-27857496)
chr6 (312-376)||(32976037-32976101)
chr6 (386-445)||(14492268-14492327)
chr6 (381-444)||(22742333-22742396)
chr6 (295-424)||(32917205-32917337)
chr6 (320-445)||(4248924-4249049)
chr6 (283-375)||(8420114-8420207)
chr6 (353-418)||(9041448-9041513)
chr6 (297-374)||(31461733-31461810)
chr6 (382-443)||(32975946-32976007)
chr6 (299-376)||(33385588-33385665)
chr6 (284-340)||(2795356-2795412)
chr6 (311-375)||(11600820-11600884)
chr6 (393-445)||(29274281-29274333)
chr6 (319-374)||(5731630-5731685)
chr6 (321-364)||(20351219-20351262)
chr6 (283-370)||(20861616-20861703)
chr6 (383-446)||(25426135-25426198)
chr6 (284-375)||(32171302-32171393)
chr6 (283-350)||(33788049-33788116)
chr6 (381-440)||(33828617-33828676)
chr6 (284-342)||(281767-281825)
chr6 (383-445)||(1402962-1403024)
chr6 (383-473)||(2514640-2514730)
chr6 (395-445)||(5550098-5550148)
chr6 (388-442)||(5623125-5623179)
chr6 (391-445)||(9093606-9093660)
chr6 (386-444)||(30523627-30523684)
chr6 (283-324)||(6536723-6536764)
chr6 (391-440)||(7485118-7485167)
chr6 (283-356)||(7901749-7901822)
chr6 (311-368)||(10353707-10353764)
chr6 (384-441)||(10400239-10400296)
chr6 (388-445)||(20671912-20671969)
chr6 (388-433)||(25100021-25100066)
chr6 (372-445)||(28088253-28088326)
chr6 (283-340)||(29249488-29249545)
chr6 (284-341)||(30536884-30536941)
chr6 (283-336)||(33089605-33089658)
[»] chr1 (61 HSPs)
chr1 (284-445)||(40303998-40304158)
chr1 (383-442)||(7218116-7218175)
chr1 (383-442)||(25006076-25006135)
chr1 (383-441)||(17269220-17269278)
chr1 (389-445)||(27738228-27738284)
chr1 (386-445)||(25479547-25479606)
chr1 (295-417)||(16980821-16980943)
chr1 (383-433)||(25005839-25005889)
chr1 (327-445)||(47002861-47002978)
chr1 (287-372)||(10199330-10199415)
chr1 (284-341)||(24460320-24460377)
chr1 (284-373)||(32515360-32515449)
chr1 (372-445)||(34179903-34179976)
chr1 (284-376)||(48282183-48282273)
chr1 (284-372)||(6292556-6292643)
chr1 (393-445)||(30371114-30371166)
chr1 (284-376)||(34536217-34536309)
chr1 (390-445)||(5592734-5592789)
chr1 (286-373)||(15581316-15581403)
chr1 (390-445)||(28467356-28467411)
chr1 (386-445)||(33186002-33186061)
chr1 (390-445)||(49517036-49517091)
chr1 (297-376)||(49691985-49692063)
chr1 (359-401)||(26293146-26293188)
chr1 (383-445)||(30257649-30257711)
chr1 (284-378)||(33723301-33723395)
chr1 (388-445)||(5421967-5422024)
chr1 (381-438)||(8130409-8130466)
chr1 (319-376)||(14737680-14737737)
chr1 (313-370)||(27976670-27976725)
chr1 (285-374)||(44115825-44115914)
chr1 (372-445)||(45205034-45205107)
chr1 (284-376)||(3597200-3597292)
chr1 (383-443)||(9656618-9656678)
chr1 (388-436)||(12564921-12564969)
chr1 (284-344)||(21002246-21002306)
chr1 (383-431)||(29045954-29046002)
chr1 (352-444)||(37841965-37842057)
chr1 (387-442)||(4034061-4034116)
chr1 (283-350)||(4276568-4276635)
chr1 (389-444)||(10581125-10581180)
chr1 (284-375)||(23373232-23373323)
chr1 (389-444)||(31623990-31624045)
chr1 (483-514)||(35666982-35667013)
chr1 (325-376)||(44422758-44422809)
chr1 (385-443)||(2487841-2487899)
chr1 (383-445)||(4200195-4200257)
chr1 (279-369)||(12564413-12564503)
chr1 (403-445)||(15360860-15360902)
chr1 (284-378)||(17269307-17269401)
chr1 (483-517)||(32555701-32555735)
chr1 (296-369)||(2295163-2295235)
chr1 (411-476)||(2773674-2773739)
chr1 (372-445)||(15361679-15361752)
chr1 (383-444)||(17422980-17423041)
chr1 (294-339)||(17628691-17628736)
chr1 (286-371)||(18327067-18327152)
chr1 (408-473)||(34619445-34619510)
chr1 (378-419)||(42556668-42556709)
chr1 (383-444)||(44422666-44422727)
chr1 (388-445)||(49888733-49888790)
[»] scaffold0110 (1 HSPs)
scaffold0110 (359-432)||(35813-35885)
[»] scaffold0024 (3 HSPs)
scaffold0024 (388-445)||(27542-27599)
scaffold0024 (311-371)||(27640-27700)
scaffold0024 (483-515)||(23806-23838)
[»] scaffold0311 (1 HSPs)
scaffold0311 (312-376)||(10564-10628)


Alignment Details
Target: chr3 (Bit Score: 654; Significance: 0; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 654; E-Value: 0
Query Start/End: Original strand, 92 - 801
Target Start/End: Original strand, 21872022 - 21872731
Alignment:
Q  92 attatgccatgcataatgtgacattgatattccacaaaagaaaacagtgaggattccacttagttcaagtagctgcataaaagctttcagttaagatgga 191  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21872022 attatgccatgcataatgtgacattgatattccacaaaagaaaacagtgaggattccacttagttcaagtagctgcataaaagctttcagttaagatgga 21872121  T
Q  192 tagcaaaaaggatagtatctaaacttaaaaaagctaaaatcttcaaaagcttatccgacttcattttgactgagttgaaactcatttaagtatgtttgga 291  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21872122 tagcaaaaaggatagtatctaaacttaaaaaagctaaaatcttcaaaagcttatccgacttcattttgactgagttgaaactcatttaagtatgtttgga 21872221  T
Q  292 ttaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatgaactttccaggata 391  Q
    |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  21872222 ttaacttatttgatcttatctactgacataagcacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccataaactttccaggata 21872321  T
Q  392 gcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatctactattagaaaaatggcttatgcataagtacaatataataagtgtt 491  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||    
T  21872322 gcttatgaaaacaacttatagcttatatcaaaaaaatttgaccttattttatctcctattataaaaatggcttatgcataagtacaatatagtaagtgtt 21872421  T
Q  492 taattaagttgtttatccaaacagcgtcttagttctttgggattttaaccgatggaaaatcattgaaagacagattaaatgagcatcaaatacctctgcc 591  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21872422 taattaagttgtttatccaaacagcgtcttagttctttgggattttaaccgatggaaaatcattgaaagacagattaaatgagcatcaaatacctctgcc 21872521  T
Q  592 aacatgtaggataggtatgccattagcatcatcaatgaaatttcgcgtacacttgaatgtctgcaggcatatgcaaggggaattcgttaatttttcctta 691  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  21872522 aacatgtaggataggtatgccattagcatcatcaatgaaatttcgcgtacacttgaatgtctgcaggcatatgcaaggggaatttgttaatttgtcctta 21872621  T
Q  692 aattttcactctgccttaactcaagaatgtgaaatgcaattgttgaactgtgatgttcccattttacatcattatggaaataccattttggagaacttct 791  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  21872622 aattttcactttgccttaactcaagaatgtgaaaagcaattgttgaactgtgatgttcccatttcacatcattctggaaataccattttggagaacttct 21872721  T
Q  792 agagaataat 801  Q
    ||||||||||    
T  21872722 agagaataat 21872731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 283 - 381
Target Start/End: Complemental strand, 24624362 - 24624264
Alignment:
Q  283 atgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatgaact 381  Q
    |||| ||||||  |||| |||| |||| ||||| |||| || |||||| ||||||||||||| ||||| |||||| |||||||||||||||||| ||||    
T  24624362 atgtgtggattggcttagttgaacttatctactcacattagcacttgtaagactgtttggaagagcttatgaaaacagcttatgacatgtccataaact 24624264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 391 - 444
Target Start/End: Original strand, 42084301 - 42084354
Alignment:
Q  391 agcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatc 444  Q
    ||||||||||| ||||| ||||||||||||||||||| ||||| ||||||||||    
T  42084301 agcttatgaaaacaactaatagcttatatcaaaacaagttgacattattttatc 42084354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 284 - 372
Target Start/End: Original strand, 41164909 - 41164997
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgt 372  Q
    ||||||||||| ||||||||| |||| |||| | |||||| |||||||| | ||||||||||| ||| | |||| || |||||||||||    
T  41164909 tgtttggattagcttatttgaacttatctaccggcataagaacttgtgacaatgtttggaaaaacttattaaaacagtttatgacatgt 41164997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 361 - 445
Target Start/End: Original strand, 48364899 - 48364983
Alignment:
Q  361 cttatgacatgtccatgaactttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||| |||||||||| | ||||||| | ||||| |||||| |||||||| || || || ||||||||||||| |||||||||||    
T  48364899 cttataacatgtccataagctttccaaggtagctaatgaaaacaacttatggcgtaaatgaaaacaatttgactttattttatct 48364983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 391 - 459
Target Start/End: Complemental strand, 48397666 - 48397598
Alignment:
Q  391 agcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatctactattagaaaaat 459  Q
    |||| |||||| |||||||||||||| || ||||||||||||| |||||||||||  ||||| ||||||    
T  48397666 agctaatgaaaacaacttatagcttaaataaaaacaatttgactttattttatcttttattataaaaat 48397598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 383 - 458
Target Start/End: Complemental strand, 1816611 - 1816536
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatctactattagaaaaa 458  Q
    ||||| ||||||||||||| ||||||||| ||||||  |||||| |||||| |||||||||||  ||||| |||||    
T  1816611 tccagtatagcttatgaaaacaacttatatcttatacaaaaacagtttgactttattttatcttttattataaaaa 1816536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 383 - 446
Target Start/End: Original strand, 24887325 - 24887388
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatcta 446  Q
    ||||||||||||||||||| || ||| |||||||||| || ||| |||||| ||||||||||||    
T  24887325 tccaggatagcttatgaaaacagcttttagcttatatgaatacagtttgactttattttatcta 24887388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 382 - 445
Target Start/End: Original strand, 32555022 - 32555085
Alignment:
Q  382 ttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||||||| || |||||| ||||||||||||||||  |||| |||||||| |||||||||||    
T  32555022 ttccaggataactcatgaaaacaacttatagcttataggaaaataatttgactttattttatct 32555085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 297 - 376
Target Start/End: Complemental strand, 41724350 - 41724271
Alignment:
Q  297 ttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccat 376  Q
    |||||||| |||| |||||||||||||||||||| |||| |||||  ||| ||| || ||| | ||||||||||||||||    
T  41724350 ttatttgaacttatctactgacataagtacttgtcagacagtttgtgaaaacttatggaaacaacttatgacatgtccat 41724271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 284 - 376
Target Start/End: Original strand, 25182909 - 25182998
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccat 376  Q
    |||||||| | |||||||||| ||||||||||   ||||| |||||||||||||||||  | ||||| |||||| | |||||||||| |||||    
T  25182909 tgtttggagtgacttatttgagcttacctact---ataagaacttgtgagactgtttgagagagcttatgaaaacaacttatgacatatccat 25182998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 395 - 445
Target Start/End: Original strand, 44061077 - 44061127
Alignment:
Q  395 tatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||| ||||||||||||||||  |||||||||| ||||||||||||||    
T  44061077 tatgaaaacaacttatagcttatagaaaaacaatttaaccttattttatct 44061127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 325 - 418
Target Start/End: Original strand, 2100139 - 2100232
Alignment:
Q  325 acttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatgaactttccaggatagcttatgaaagcaacttatagcttata 418  Q
    |||||||||||||||||  | ||||| || | | |||||||||||||| | | | || |||| |||| ||||||||| ||||||||||||||||    
T  2100139 acttgtgagactgtttgtgagagcttatggagacagcttatgacatgttcctaagctctccaagataacttatgaaaacaacttatagcttata 2100232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 296 - 341
Target Start/End: Complemental strand, 22667542 - 22667497
Alignment:
Q  296 cttatttgatcttacctactgacataagtacttgtgagactgtttg 341  Q
    ||||||||| |||| ||||||||||||| |||||||||||||||||    
T  22667542 cttatttgagcttatctactgacataagcacttgtgagactgtttg 22667497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 296 - 341
Target Start/End: Complemental strand, 22724181 - 22724136
Alignment:
Q  296 cttatttgatcttacctactgacataagtacttgtgagactgtttg 341  Q
    ||||||||| |||| ||||||||||||| |||||||||||||||||    
T  22724181 cttatttgagcttatctactgacataagcacttgtgagactgtttg 22724136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 297 - 378
Target Start/End: Original strand, 31710819 - 31710900
Alignment:
Q  297 ttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatga 378  Q
    |||||||| |||| |||| |||||||| ||||||||| |||||||  ||||||| | |||| | ||||||||||| ||||||    
T  31710819 ttatttgaacttatctaccgacataagaacttgtgagtctgtttgtgaaagcttataaaaacaacttatgacatgcccatga 31710900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 297 - 378
Target Start/End: Original strand, 31711074 - 31711155
Alignment:
Q  297 ttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatga 378  Q
    |||||||| |||| |||| |||||||| ||||||||| |||||||  ||||||| | |||| | ||||||||||| ||||||    
T  31711074 ttatttgaacttatctaccgacataagaacttgtgagtctgtttgtgaaagcttataaaaacaacttatgacatgcccatga 31711155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 372 - 445
Target Start/End: Original strand, 40122784 - 40122856
Alignment:
Q  372 tccatgaactttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||| ||||||  |||||||||||| ||| ||||||||||||| ||| |||||| |||||| |||||||||||    
T  40122784 tccattaactttttaggatagcttataaaaacaacttatagctt-tatgaaaacagtttgactttattttatct 40122856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 50211886 - 50211829
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttg 341  Q
    ||||||||||||||||||| | |||| ||||| ||||||| |||||| ||||||||||    
T  50211886 tgtttggattaacttattttagcttatctactaacataagcacttgtaagactgtttg 50211829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 281 - 341
Target Start/End: Original strand, 20210844 - 20210904
Alignment:
Q  281 gtatgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttg 341  Q
    ||||||||||||| | ||||||||  ||| ||||||||||||  |||||||||||||||||    
T  20210844 gtatgtttggattgatttatttgaggttatctactgacataaccacttgtgagactgtttg 20210904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 389 - 445
Target Start/End: Complemental strand, 23315648 - 23315592
Alignment:
Q  389 atagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||||||| || || |||||||| ||||| ||||||||||||| |||||||||||    
T  23315648 atagcttatggaaacatcttatagcctatatgaaaacaatttgactttattttatct 23315592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 290 - 350
Target Start/End: Complemental strand, 26542681 - 26542622
Alignment:
Q  290 gattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagctt 350  Q
    |||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||| |||||    
T  26542681 gattgacttatttgat-ttatctactcacataagtacttgtaagactgtttggaagagctt 26542622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 378 - 445
Target Start/End: Complemental strand, 2201161 - 2201094
Alignment:
Q  378 aactttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||| |||| ||||||| |||||| || |||||||||||||| |||||| |||||| || ||||||||    
T  2201161 aactatccaagatagctaatgaaaacagcttatagcttatatgaaaacagtttgactttgttttatct 2201094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 383 - 466
Target Start/End: Complemental strand, 14145940 - 14145857
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatctactattagaaaaatggcttat 466  Q
    |||| ||||||||||||||  |||||||||| ||||  |||||||||| || ||||||||||| || ||| |||| | ||||||    
T  14145940 tccaagatagcttatgaaaataacttatagcatatacgaaaacaatttaactttattttatcttctgttataaaacttgcttat 14145857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 286 - 341
Target Start/End: Original strand, 24158437 - 24158492
Alignment:
Q  286 tttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttg 341  Q
    ||||||||  ||||||| | |||| |||||||||||||||||||||| ||||||||    
T  24158437 tttggattggcttatttaagcttatctactgacataagtacttgtgaaactgtttg 24158492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 284 - 367
Target Start/End: Original strand, 26320016 - 26320099
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatga 367  Q
    |||||||||| ||||||||||||||   |||||| ||||  |||||||| ||| ||||  ||| ||| ||||||||||||||||    
T  26320016 tgtttggattgacttatttgatcttttatactgaaataaacacttgtgaaactttttgttaaaacttatgaaaatagcttatga 26320099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 372
Target Start/End: Original strand, 26330255 - 26330330
Alignment:
Q  297 ttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgt 372  Q
    ||||||||  ||| ||||||| ||||||| |||||||||||||| ||| ||||| |||||| | ||| ||||||||    
T  26330255 ttatttgaggttatctactgaaataagtatttgtgagactgtttagaagagcttatgaaaacaacttctgacatgt 26330330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 445
Target Start/End: Original strand, 31337450 - 31337505
Alignment:
Q  390 tagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||||||||  ||||||||| ||||||| |||||| |||||| |||||||||||    
T  31337450 tagcttatgaatacaacttataacttatataaaaacagtttgactttattttatct 31337505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 386 - 445
Target Start/End: Original strand, 36646427 - 36646486
Alignment:
Q  386 aggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||||||||||||| ||| ||||| ||||||| |||||||||  || |||||||||||    
T  36646427 aggatagcttatgaaaacaagttataacttatatgaaaacaattatactttattttatct 36646486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 383 - 445
Target Start/End: Original strand, 30956668 - 30956730
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||| |||||||| ||||| ||||||||||| ||||  |||||||||| || |||||||||||    
T  30956668 tccaagatagcttttgaaaacaacttatagcctatacaaaaacaatttaactttattttatct 30956730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 383 - 445
Target Start/End: Original strand, 30972480 - 30972542
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||| |||||||| ||||| ||||||||||| ||||  |||||||||| || |||||||||||    
T  30972480 tccaagatagcttttgaaaacaacttatagcctatacaaaaacaatttaactttattttatct 30972542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 388 - 442
Target Start/End: Original strand, 33405214 - 33405268
Alignment:
Q  388 gatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttatttta 442  Q
    |||||||||||||| || |||||||||||||| ||||||| || || ||||||||    
T  33405214 gatagcttatgaaaacagcttatagcttatatgaaaacaaattaactttatttta 33405268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 387 - 445
Target Start/End: Complemental strand, 38462305 - 38462247
Alignment:
Q  387 ggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||||||||||| ||  ||||||| ||||| |||||| |||||| |||||||||||    
T  38462305 ggatagcttatgaaaacagtttatagcatatatgaaaacagtttgactttattttatct 38462247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 389 - 427
Target Start/End: Complemental strand, 41057060 - 41057022
Alignment:
Q  389 atagcttatgaaagcaacttatagcttatatcaaaacaa 427  Q
    ||||||||||||| ||||||||||||||||| |||||||    
T  41057060 atagcttatgaaaacaacttatagcttatatgaaaacaa 41057022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 383 - 433
Target Start/End: Complemental strand, 43875676 - 43875626
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgac 433  Q
    |||| |||||||||||||| ||||||||||||||||| | |||| ||||||    
T  43875676 tccatgatagcttatgaaaacaacttatagcttatatgagaacagtttgac 43875626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 391 - 444
Target Start/End: Original strand, 3467438 - 3467491
Alignment:
Q  391 agcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatc 444  Q
    |||||| |||| ||||||||||  ||||| ||||||||||||| ||||||||||    
T  3467438 agcttacgaaaacaacttatagtctatatgaaaacaatttgactttattttatc 3467491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 392 - 445
Target Start/End: Original strand, 10101527 - 10101580
Alignment:
Q  392 gcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||||||| |||||| || ||||||| |||||||||| || |||||||||||    
T  10101527 gcttatgaaaacaacttttatcttatatgaaaacaatttaactttattttatct 10101580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 392 - 445
Target Start/End: Original strand, 10212452 - 10212505
Alignment:
Q  392 gcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||||||| |||||| || ||||||| |||||||||| || |||||||||||    
T  10212452 gcttatgaaaacaacttttatcttatatgaaaacaatttaactttattttatct 10212505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 378 - 443
Target Start/End: Original strand, 19679365 - 19679430
Alignment:
Q  378 aactttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttat 443  Q
    |||| |||| ||||| |||| ||| ||||||||||||||||  |||||| |||||| |||||||||    
T  19679365 aactctccaagatagtttataaaaacaacttatagcttataagaaaacagtttgactttattttat 19679430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 389 - 445
Target Start/End: Complemental strand, 21865598 - 21865544
Alignment:
Q  389 atagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||||| ||| ||||||||||||||||| ||||||  |||||||| ||||||||    
T  21865598 atagcttatcaaaacaacttatagcttatatgaaaaca--ttgaccttgttttatct 21865544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 386 - 427
Target Start/End: Original strand, 22214704 - 22214745
Alignment:
Q  386 aggatagcttatgaaagcaacttatagcttatatcaaaacaa 427  Q
    |||||||||||||||| |||||||||| |||||| |||||||    
T  22214704 aggatagcttatgaaaacaacttataggttatatgaaaacaa 22214745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 388 - 433
Target Start/End: Complemental strand, 23249581 - 23249536
Alignment:
Q  388 gatagcttatgaaagcaacttatagcttatatcaaaacaatttgac 433  Q
    |||||||||||||| ||||||||| ||||||| |||||| ||||||    
T  23249581 gatagcttatgaaaacaacttatatcttatataaaaacagtttgac 23249536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 297 - 350
Target Start/End: Complemental strand, 25130016 - 25129963
Alignment:
Q  297 ttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagctt 350  Q
    ||||| || |||| ||||||||||| |||||||||||||||||| ||| |||||    
T  25130016 ttattcgaacttatctactgacatatgtacttgtgagactgtttagaagagctt 25129963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 25447164 - 25447220
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttg 341  Q
    |||||||||| ||||||||||  ||| ||||||||||||||  |||||||||||||||    
T  25447164 tgtttggattgacttatttgagtttatctactgacataagt-tttgtgagactgtttg 25447220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 388 - 445
Target Start/End: Complemental strand, 27792895 - 27792838
Alignment:
Q  388 gatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||| |||||||| ||||||  ||||||||| |||| | ||||||||||||||||||    
T  27792895 gatagtttatgaaaacaacttgcagcttatatgaaaatagtttgaccttattttatct 27792838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 389 - 442
Target Start/End: Complemental strand, 28306180 - 28306127
Alignment:
Q  389 atagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttatttta 442  Q
    ||||||||||||| |||||| || ||||||| |||||| |||||| ||||||||    
T  28306180 atagcttatgaaaacaacttgtaacttatatgaaaacagtttgactttatttta 28306127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 1e-31; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 283 - 445
Target Start/End: Complemental strand, 34771020 - 34770858
Alignment:
Q  283 atgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatgaactt 382  Q
    |||||||| || ||||||||||  ||| || ||  |||||| |||||||| ||||||||  | | | | |||||| |||||||||||||||||||||||     
T  34771020 atgtttggtttgacttatttgagtttatctgctagcataagcacttgtgaaactgtttgagagatcctatgaaaacagcttatgacatgtccatgaactc 34770921  T
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    || |||||||||||||||| |||||||||||||| || ||||||||||||| |||||||||||    
T  34770920 tctaggatagcttatgaaaacaacttatagcttaaatgaaaacaatttgactttattttatct 34770858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 284 - 372
Target Start/End: Original strand, 43368619 - 43368707
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgt 372  Q
    |||||||||| ||||||||||||||| ||||| ||||||| | ||||||||||| ||| || ||||| |||||| | ||||||||||||    
T  43368619 tgtttggattgacttatttgatcttatctactaacataagcatttgtgagactggttgtaacagcttatgaaaacaacttatgacatgt 43368707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 383 - 445
Target Start/End: Original strand, 6509345 - 6509407
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||||||||||||||| || |||||||||||||| || |||||||||| |||||||||||    
T  6509345 tccaggatagcttatgaaaacagcttatagcttatataaatacaatttgactttattttatct 6509407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 290 - 372
Target Start/End: Original strand, 39881646 - 39881728
Alignment:
Q  290 gattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgt 372  Q
    |||| |||||||||| |||| ||| || |||||  |||||||||| ||||||||| ||||| |||||||||||||||||||||    
T  39881646 gattgacttatttgaacttatctattggcataaacacttgtgagattgtttggaagagcttgtgaaaatagcttatgacatgt 39881728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 317 - 445
Target Start/End: Original strand, 31915245 - 31915373
Alignment:
Q  317 acataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatgaactttccaggatagcttatgaaagcaacttatagctta 416  Q
    |||||| ||||||||||||||||||  ||||||| |  ||| | ||||||||| |||||| | || ||||||||||||||  ||  || |||||| |||     
T  31915245 acataaatacttgtgagactgtttgagaaagcttatacaaacaacttatgacaagtccataagctctccaggatagcttacaaagacatcttataccttg 31915344  T
Q  417 tatcaaaacaatttgaccttattttatct 445  Q
    ||| ||||||||||||| ||||| |||||    
T  31915345 tatgaaaacaatttgactttattctatct 31915373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 283 - 378
Target Start/End: Complemental strand, 7714394 - 7714299
Alignment:
Q  283 atgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatga 378  Q
    ||||||||||| |||||||||| ||||  || || |||||  |||||||||||||||||||||||||| || ||| | ||||||| ||||| ||||    
T  7714394 atgtttggattgacttatttgagcttatataatgtcataaacacttgtgagactgtttggaaaagcttgtggaaacaacttatgaaatgtcgatga 7714299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 295 - 357
Target Start/End: Original strand, 2364390 - 2364452
Alignment:
Q  295 acttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaa 357  Q
    |||||||||| |||| || ||||||||||||||||||||||||||||||| || || ||||||    
T  2364390 acttatttgaacttatcttctgacataagtacttgtgagactgtttggaagagattatgaaaa 2364452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 284 - 445
Target Start/End: Complemental strand, 4764045 - 4763884
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatgaacttt 383  Q
    |||||||||| |||||||||| |||| | |||  |||||| || | ||||||| |||   | |||||||||||| | || ||||||||||||| | || |    
T  4764045 tgtttggattgacttatttgaacttatccactagcataagcacctatgagactatttaagagagcttttgaaaacatctaatgacatgtccataagctct 4763946  T
Q  384 ccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
     ||||||||||||  ||| || |||||||||||| | |||||  |||||  |||||||||||    
T  4763945 tcaggatagcttagaaaaacagcttatagcttatgtgaaaacggtttgaatttattttatct 4763884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 296 - 372
Target Start/End: Complemental strand, 11376842 - 11376766
Alignment:
Q  296 cttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgt 372  Q
    ||||||||| |||| ||||||| |||||| ||||||||||| ||||| | | ||| |||||||||||| ||||||||    
T  11376842 cttatttgagcttatctactgatataagttcttgtgagactatttgggagaacttatgaaaatagcttgtgacatgt 11376766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 385 - 432
Target Start/End: Complemental strand, 1561300 - 1561253
Alignment:
Q  385 caggatagcttatgaaagcaacttatagcttatatcaaaacaatttga 432  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||    
T  1561300 caggatagcttatgaaaacaacttgtagcttatattaaaacaatttga 1561253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 385 - 432
Target Start/End: Complemental strand, 2091787 - 2091740
Alignment:
Q  385 caggatagcttatgaaagcaacttatagcttatatcaaaacaatttga 432  Q
    ||||||||||||||||| |||||| |||||||||| ||||||||||||    
T  2091787 caggatagcttatgaaaacaacttgtagcttatattaaaacaatttga 2091740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 388 - 431
Target Start/End: Original strand, 9834836 - 9834879
Alignment:
Q  388 gatagcttatgaaagcaacttatagcttatatcaaaacaatttg 431  Q
    |||||||||||||| ||||||||||||||||| |||||||||||    
T  9834836 gatagcttatgaaaacaacttatagcttatatgaaaacaatttg 9834879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 389 - 444
Target Start/End: Complemental strand, 11376725 - 11376670
Alignment:
Q  389 atagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatc 444  Q
    |||||||| ||||||| ||||||||||||||||||| |||| ||| ||||||||||    
T  11376725 atagcttaagaaagcatcttatagcttatatcaaaataattagactttattttatc 11376670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 314 - 377
Target Start/End: Complemental strand, 21130733 - 21130670
Alignment:
Q  314 ctgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatg 377  Q
    ||||||||| ||||||||||||||||||  | ||||| || ||||||||| |||||||||||||    
T  21130733 ctgacataaatacttgtgagactgtttgagagagcttatggaaatagcttttgacatgtccatg 21130670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 283 - 342
Target Start/End: Complemental strand, 34849256 - 34849197
Alignment:
Q  283 atgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttgg 342  Q
    ||||| |||||| ||||||||| |||| |||||| ||||||||||| |||||||||||||    
T  34849256 atgttcggattagcttatttgagcttagctactggcataagtacttttgagactgtttgg 34849197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 284 - 334
Target Start/End: Complemental strand, 18331865 - 18331815
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgaga 334  Q
    |||||||||| ||||||||||||||| ||||| ||||||| ||||||||||    
T  18331865 tgtttggattgacttatttgatcttatctactaacataagcacttgtgaga 18331815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 372 - 442
Target Start/End: Complemental strand, 29973120 - 29973050
Alignment:
Q  372 tccatgaactttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttatttta 442  Q
    ||||| |||| || |||||||||||||||| ||||||||||||||| | |||| | |||||| ||||||||    
T  29973120 tccataaactctcaaggatagcttatgaaaacaacttatagcttatgtgaaaatagtttgactttatttta 29973050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 283 - 372
Target Start/End: Original strand, 2487926 - 2488015
Alignment:
Q  283 atgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgt 372  Q
    |||||||||||  |||||||||  | | ||||||||||||| |||||||||||||||||| | | ||| |||||| | ||||| ||||||    
T  2487926 atgtttggattggcttatttgagttcatctactgacataagcacttgtgagactgtttgggagaacttatgaaaacaacttataacatgt 2488015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 380 - 433
Target Start/End: Complemental strand, 7646009 - 7645956
Alignment:
Q  380 ctttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgac 433  Q
    |||| |||| |||||||||||| |||||||||||||| || |||||||||||||    
T  7646009 ctttacaggttagcttatgaaaacaacttatagcttacatgaaaacaatttgac 7645956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 286 - 376
Target Start/End: Complemental strand, 12361343 - 12361251
Alignment:
Q  286 tttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaag--cttttgaaaatagcttatgacatgtccat 376  Q
    |||||||| |||||||||| |||| ||||||| |||||||||||| ||||| ||||  | ||  ||| |  ||||||||||||||||||||||    
T  12361343 tttggattgacttatttgaacttatctactgatataagtacttgttagactctttgagagagatcttatagaaatagcttatgacatgtccat 12361251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 14926901 - 14926958
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttg 341  Q
    |||||||||| |||||||||| ||||  ||||| |||||| |||||||||||||||||    
T  14926901 tgtttggattgacttatttgaacttatttactggcataagcacttgtgagactgtttg 14926958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 378 - 466
Target Start/End: Original strand, 1470893 - 1470981
Alignment:
Q  378 aactttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatctactattagaaaaatggcttat 466  Q
    |||||| || ||||| |||||||| || |||||||||||||| |||  |||||||| |||||||||||  ||||| | |||| ||||||    
T  1470893 aacttttcatgataggttatgaaaacagcttatagcttatatgaaagtaatttgactttattttatcttttattatagaaatagcttat 1470981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 385 - 445
Target Start/End: Complemental strand, 2093305 - 2093245
Alignment:
Q  385 caggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||||||| |||||| |||||||||||||| |  ||||| ||||||| |||||||||||    
T  2093305 caggatagctaatgaaaacaacttatagcttaaaagaaaaccatttgactttattttatct 2093245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 286 - 342
Target Start/End: Original strand, 8535976 - 8536032
Alignment:
Q  286 tttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttgg 342  Q
    ||||||||  || ||||||  ||| ||||||||||||||||||||||||||||||||    
T  8535976 tttggattggctaatttgaatttatctactgacataagtacttgtgagactgtttgg 8536032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 284 - 376
Target Start/End: Complemental strand, 9700152 - 9700060
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccat 376  Q
    ||||||||||||||||||||| |||| |||||  |||||  |||||||||||| ||||  | ||||| |||||  |  |||||||||||||||    
T  9700152 tgtttggattaacttatttgagcttatctactagcataaacacttgtgagactatttgagagagcttgtgaaatcaatttatgacatgtccat 9700060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 393 - 445
Target Start/End: Complemental strand, 12361210 - 12361158
Alignment:
Q  393 cttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||||| || |||||||||||||| ||||||||||||| | |||||||||    
T  12361210 cttatgaaaacagcttatagcttatatgaaaacaatttgacttcattttatct 12361158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 477 - 521
Target Start/End: Complemental strand, 31167903 - 31167859
Alignment:
Q  477 aatataataagtgtttaattaagttgtttatccaaacagcgtctt 521  Q
    ||||| ||||||| ||||||||||||||||||||||||| |||||    
T  31167903 aatatgataagtgcttaattaagttgtttatccaaacagagtctt 31167859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 284 - 344
Target Start/End: Original strand, 37353091 - 37353151
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaa 344  Q
    |||||||||  |||||| ||| | || ||||||||||||| ||||||||||||||||||||    
T  37353091 tgtttggatcgacttatctgaacctatctactgacataagcacttgtgagactgtttggaa 37353151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 392 - 476
Target Start/End: Complemental strand, 42597420 - 42597336
Alignment:
Q  392 gcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatctactattagaaaaatggcttatgcataagtac 476  Q
    |||||||||| |||||||||||||  || |||||||||| || |||||||||||  | ||| | |||| |||||| |||||||||    
T  42597420 gcttatgaaaacaacttatagcttgcatgaaaacaattttactttattttatcttttgttatagaaatagcttatacataagtac 42597336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 357 - 412
Target Start/End: Original strand, 9912805 - 9912860
Alignment:
Q  357 atagcttatgacatgtccatgaactttccaggatagcttatgaaagcaacttatag 412  Q
    |||||||||||||||||||| | || |||||||||||||| |||| || |||||||    
T  9912805 atagcttatgacatgtccataagctctccaggatagcttaggaaaacagcttatag 9912860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 311 - 350
Target Start/End: Original strand, 25881361 - 25881400
Alignment:
Q  311 ctactgacataagtacttgtgagactgtttggaaaagctt 350  Q
    ||||||||||||||||||||||||||||||| || |||||    
T  25881361 ctactgacataagtacttgtgagactgtttgaaagagctt 25881400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 378 - 429
Target Start/End: Complemental strand, 31884627 - 31884576
Alignment:
Q  378 aactttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatt 429  Q
    |||| |||| |||||||||||||| ||| ||||||||||||| |||||||||    
T  31884627 aactctccatgatagcttatgaaaacaatttatagcttatatgaaaacaatt 31884576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 44236742 - 44236797
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtt 339  Q
    ||||||||||| |||||||||  ||| |||||| |||||| |||||||||||||||    
T  44236742 tgtttggattaccttatttgagtttatctactggcataagcacttgtgagactgtt 44236797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 296 - 370
Target Start/End: Original strand, 1058008 - 1058081
Alignment:
Q  296 cttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacat 370  Q
    ||||||||| |||| ||||| ||||||||  |||||||||||||||| | | ||||||||||  |||||||||||    
T  1058008 cttatttgagcttatctacttacataagtt-ttgtgagactgtttgggagaacttttgaaaactgcttatgacat 1058081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 386 - 472
Target Start/End: Complemental strand, 4558823 - 4558737
Alignment:
Q  386 aggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatctactattagaaaaatggcttatgcataa 472  Q
    ||||||||||||| || || |||||||| ||||| |||| ||||| || |||||||||||  ||||| | |||| |||||| |||||    
T  4558823 aggatagcttatggaaacagcttatagcatatatgaaaataatttaactttattttatcttttattatagaaatagcttatacataa 4558737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 385 - 443
Target Start/End: Complemental strand, 10474267 - 10474210
Alignment:
Q  385 caggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttat 443  Q
    ||||||||||||||||| || | |||| ||| |||||||||||||||| ||||||||||    
T  10474267 caggatagcttatgaaaacatcatataacttgtatcaaaacaatttga-cttattttat 10474210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 391 - 441
Target Start/End: Original strand, 11059745 - 11059794
Alignment:
Q  391 agcttatgaaagcaacttatagcttatatcaaaacaatttgaccttatttt 441  Q
    ||||||||||| |||| ||||||||||||  ||||||||||||||||||||    
T  11059745 agcttatgaaaacaacctatagcttatat-gaaacaatttgaccttatttt 11059794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 383 - 445
Target Start/End: Original strand, 29592574 - 29592636
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||||||||||| |||| || |||||||||||||   ||||||||| || |||||||||||    
T  29592574 tccaggatagcttacgaaaacagcttatagcttataaggaaacaattttactttattttatct 29592636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 284 - 342
Target Start/End: Complemental strand, 38602478 - 38602421
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttgg 342  Q
    |||||||||| |||||||||| |||| ||||||||||||||  ||||||| ||||||||    
T  38602478 tgtttggattgacttatttgagcttatctactgacataagt-tttgtgaggctgtttgg 38602421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 388 - 445
Target Start/End: Original strand, 787153 - 787210
Alignment:
Q  388 gatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||| ||||||||| ||  ||||||||||||| | ||||||||||| |||||||||||    
T  787153 gataacttatgaaaacagtttatagcttatatgataacaatttgactttattttatct 787210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 388 - 433
Target Start/End: Complemental strand, 8062547 - 8062502
Alignment:
Q  388 gatagcttatgaaagcaacttatagcttatatcaaaacaatttgac 433  Q
    |||||||||||| | || |||||||||||||| |||||||||||||    
T  8062547 gatagcttatgagaacatcttatagcttatatgaaaacaatttgac 8062502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 388 - 445
Target Start/End: Complemental strand, 10437907 - 10437851
Alignment:
Q  388 gatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||||||||||| | ||||| ||||||||| |||||| |||||| |||||||||||    
T  10437907 gatagcttatgaaacctacttaaagcttatat-aaaacagtttgactttattttatct 10437851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 327 - 376
Target Start/End: Complemental strand, 14949974 - 14949925
Alignment:
Q  327 ttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccat 376  Q
    |||||||||||||| | | ||||| |||||||| ||||||||||||||||    
T  14949974 ttgtgagactgtttaggagagcttatgaaaataacttatgacatgtccat 14949925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 284 - 357
Target Start/End: Original strand, 27119848 - 27119921
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaa 357  Q
    |||||||||| |||||||| | | || |||||||||   |||||||||||||||||||||| | ||| ||||||    
T  27119848 tgtttggattgacttatttaaacatatctactgacaattgtacttgtgagactgtttggaataacttatgaaaa 27119921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 388 - 445
Target Start/End: Original strand, 28784842 - 28784899
Alignment:
Q  388 gatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||||||||||  | |||| | || |||||||||||||||||| |||||||||||    
T  28784842 gatagcttatgaaaatagcttacaactgatatcaaaacaatttgactttattttatct 28784899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 372 - 445
Target Start/End: Complemental strand, 38537630 - 38537557
Alignment:
Q  372 tccatgaactttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||||  ||| |||||||| ||||||||||| ||||||| |||||  ||||||| ||||| | |||||||||    
T  38537630 tccatgagtttttcaggatagtttatgaaagcagcttatagattatacaaaaacaaattgacttcattttatct 38537557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 388 - 445
Target Start/End: Original strand, 41336692 - 41336749
Alignment:
Q  388 gatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||||||||||| ||| || ||| |||||| |||||||||||||  ||||||||||    
T  41336692 gatagcttatgaaaacaagttctagtttatatgaaaacaatttgactatattttatct 41336749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 4e-22; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 319 - 445
Target Start/End: Original strand, 38047833 - 38047959
Alignment:
Q  319 ataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatgaactttccaggatagcttatgaaagcaacttatagcttata 418  Q
    ||||||||||||| |||||||||| | ||||| || ||| | |||||||||||||||| | || ||||||||||||||||||| || | |||||  ||||    
T  38047833 ataagtacttgtgtgactgtttgggagagcttatggaaacaacttatgacatgtccataagctctccaggatagcttatgaaaacagcatatagtatata 38047932  T
Q  419 tcaaaacaatttgaccttattttatct 445  Q
    | |||| |||||||| |||||||||||    
T  38047933 tgaaaataatttgactttattttatct 38047959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 284 - 444
Target Start/End: Complemental strand, 42647041 - 42646882
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatgaacttt 383  Q
    ||||||||||  ||||||||| |||| |||||||||| || |||||  ||||| ||||||| | ||| ||||||||||||||||||||| ||| | || |    
T  42647041 tgtttggattggcttatttgagcttatctactgacattagcacttga-agactatttggaagaacttatgaaaatagcttatgacatgttcataagctct 42646943  T
Q  384 ccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatc 444  Q
    ||| ||| | |||||||| || ||||||||||| |  |||||||||| || | ||||||||    
T  42646942 ccaagatcgtttatgaaaacaccttatagcttaaacaaaaacaatttaacttaattttatc 42646882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 284 - 372
Target Start/End: Original strand, 499650 - 499738
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgt 372  Q
    |||||||||| |||||||||| |||||||||||||||||| || ||| || |||||||| | | ||| |||||| ||||||||||||||    
T  499650 tgtttggattgacttatttgagcttacctactgacataagcacctgttaggctgtttgggagaacttatgaaaacagcttatgacatgt 499738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 284 - 372
Target Start/End: Complemental strand, 28982161 - 28982073
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgt 372  Q
    |||||||||| ||||||||||||||| ||||  |   ||| |||||||||||||||||||||||||| || ||| || |||||||||||    
T  28982161 tgtttggattgacttatttgatcttaactacataggcaaggacttgtgagactgtttggaaaagcttatggaaagagattatgacatgt 28982073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 284 - 356
Target Start/End: Original strand, 36796626 - 36796698
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaa 356  Q
    |||||||||| |||||||||| |||| ||| ||||||||  ||||||||||||| |||||||| |||||||||    
T  36796626 tgtttggattgacttatttgagcttatctaatgacataaacacttgtgagactgcttggaaaaacttttgaaa 36796698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 306 - 372
Target Start/End: Original strand, 13781816 - 13781882
Alignment:
Q  306 cttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgt 372  Q
    |||| ||||| |||||||||||||||||||||||||| | ||||| |  ||||||||||||||||||    
T  13781816 cttatctactaacataagtacttgtgagactgtttggtagagcttgtagaaatagcttatgacatgt 13781882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 445
Target Start/End: Complemental strand, 14295534 - 14295472
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||||||||||| |||| || |||||||||||||| |||||| |||||| |||||||||||    
T  14295534 tccaggatagcttacgaaaacagcttatagcttatatgaaaacagtttgactttattttatct 14295472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 284 - 376
Target Start/End: Complemental strand, 14331517 - 14331426
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccat 376  Q
    |||||||||| |||||||||| |||| |||||| |||||| |||  ||||| ||||||||||| | ||  |||| ||||||||||||||||||    
T  14331517 tgtttggattgacttatttgagcttatctactgtcataagcactcttgagattgtttggaaaaac-ttacaaaacagcttatgacatgtccat 14331426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 388 - 444
Target Start/End: Complemental strand, 34205262 - 34205206
Alignment:
Q  388 gatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatc 444  Q
    |||||||||||||| ||||||||||||||||| |||| |||||||| ||| ||||||    
T  34205262 gatagcttatgaaaacaacttatagcttatataaaaataatttgactttactttatc 34205206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 380 - 472
Target Start/End: Complemental strand, 35960444 - 35960353
Alignment:
Q  380 ctttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatctactattagaaaaatggcttatgcataa 472  Q
    |||||||||||||||||||||| |||||||||| ||||||  ||| | |||||| |||||||||||  ||||| | |||| | ||||||||||    
T  35960444 ctttccaggatagcttatgaaatcaacttatagtttatat-gaaatagtttgactttattttatcttttattatagaaatagtttatgcataa 35960353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 378 - 445
Target Start/End: Original strand, 10272468 - 10272535
Alignment:
Q  378 aactttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||| |||| ||| |||||||||| ||||||||||||||||  ||||||||||||| | |||||||||    
T  10272468 aactctccaagatggcttatgaaaacaacttatagcttatacgaaaacaatttgacttaattttatct 10272535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 382 - 445
Target Start/End: Original strand, 41277391 - 41277454
Alignment:
Q  382 ttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||| |||||||||||||| |||||| || ||||||| |||||| |||||| |||||||||||    
T  41277391 ttccaagatagcttatgaaaacaacttttaacttatatgaaaacagtttgactttattttatct 41277454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 297 - 415
Target Start/End: Original strand, 11095427 - 11095545
Alignment:
Q  297 ttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatgaactttccaggatagctta 396  Q
    |||||| | |||| ||||||||||||  |||||||| | ||||||  | | ||| || ||| |||||||||||||||||| |  | ||||| ||||||||    
T  11095427 ttatttaagcttatctactgacataaacacttgtgatattgtttgagagaacttgtggaaacagcttatgacatgtccataagttctccagaatagctta 11095526  T
Q  397 tgaaagcaacttatagctt 415  Q
    ||||| |||||| ||||||    
T  11095527 tgaaaacaacttgtagctt 11095545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 383 - 440
Target Start/End: Original strand, 18543238 - 18543296
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaa-tttgaccttattt 440  Q
    ||||||||||||||||||| ||||||||| ||||||| ||||||| |||||| ||||||    
T  18543238 tccaggatagcttatgaaaacaacttatatcttatataaaaacaagtttgactttattt 18543296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 42034211 - 42034154
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttg 341  Q
    ||||||||||| ||||||||| |||||||||||||||||| |||| ||  ||||||||    
T  42034211 tgtttggattagcttatttgagcttacctactgacataagcacttatgcaactgtttg 42034154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 383 - 443
Target Start/End: Complemental strand, 12975375 - 12975315
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttat 443  Q
    |||| |||||||||||||  || |||||||||||||| ||||||||||||  |||||||||    
T  12975375 tccaagatagcttatgaacacagcttatagcttatatgaaaacaatttgattttattttat 12975315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 286 - 334
Target Start/End: Original strand, 14706205 - 14706253
Alignment:
Q  286 tttggattaacttatttgatcttacctactgacataagtacttgtgaga 334  Q
    |||||||| |||||||||| |||||||||||||||||  ||||||||||    
T  14706205 tttggattgacttatttgagcttacctactgacataaacacttgtgaga 14706253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 383 - 419
Target Start/End: Original strand, 34117578 - 34117614
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatat 419  Q
    |||| ||||||||||||||||||||||||||||||||    
T  34117578 tccaagatagcttatgaaagcaacttatagcttatat 34117614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 390 - 445
Target Start/End: Complemental strand, 9927605 - 9927551
Alignment:
Q  390 tagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||||||||| |||||||| |||||||| ||||||||||||| | |||||||||    
T  9927605 tagcttatgaaa-caacttatcgcttatatgaaaacaatttgacgtaattttatct 9927551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 389 - 432
Target Start/End: Original strand, 19138767 - 19138810
Alignment:
Q  389 atagcttatgaaagcaacttatagcttatatcaaaacaatttga 432  Q
    ||||||||||||| ||||||||||||||| | ||||||||||||    
T  19138767 atagcttatgaaaacaacttatagcttatctgaaaacaatttga 19138810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 445
Target Start/End: Original strand, 32059642 - 32059693
Alignment:
Q  394 ttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||||| || |||||||||||||| |||||| |||||| |||||||||||    
T  32059642 ttatgaaaacagcttatagcttatatgaaaacagtttgactttattttatct 32059693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 32194011 - 32194066
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtt 339  Q
    |||||||||| |||||||||| |||| ||| ||| ||||| |||||||||||||||    
T  32194011 tgtttggattgacttatttgagcttaactaatgatataagaacttgtgagactgtt 32194066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 284 - 370
Target Start/End: Complemental strand, 10640104 - 10640019
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacat 370  Q
    ||||||||||| |||||||||  ||| ||||||||||||||  |||||| | ||||||| | | ||| |||||| ||||||||||||    
T  10640104 tgtttggattagcttatttgagtttatctactgacataagt-tttgtgatattgtttgggagaacttatgaaaacagcttatgacat 10640019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 383 - 445
Target Start/End: Complemental strand, 12425599 - 12425537
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||| |||||||| ||||| || |||||||||||||  |||||||||| || |||||||||||    
T  12425599 tccaagatagcttgtgaaaacagcttatagcttatacgaaaacaatttaactttattttatct 12425537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 284 - 334
Target Start/End: Original strand, 25705578 - 25705628
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgaga 334  Q
    |||||||||||| |||||||| |||| ||||| ||||||| ||||||||||    
T  25705578 tgtttggattaaattatttgaacttatctactaacataagcacttgtgaga 25705628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 388 - 445
Target Start/End: Original strand, 26209460 - 26209518
Alignment:
Q  388 gatagcttatgaaagcaacttatagcttata-tcaaaacaatttgaccttattttatct 445  Q
    |||||||||||||| || ||||||||||||| | ||||||||| ||| |||||||||||    
T  26209460 gatagcttatgaaaacagcttatagcttatattgaaaacaattggactttattttatct 26209518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 284 - 342
Target Start/End: Complemental strand, 31208623 - 31208565
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttgg 342  Q
    |||||||||| |||||||||| || | ||||||||||||| ||  ||||||||||||||    
T  31208623 tgtttggattgacttatttgaactgaactactgacataagcacccgtgagactgtttgg 31208565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 295 - 341
Target Start/End: Complemental strand, 37969017 - 37968971
Alignment:
Q  295 acttatttgatcttacctactgacataagtacttgtgagactgtttg 341  Q
    |||| ||||| |||| |||||||||||||||||||||| ||||||||    
T  37969017 acttgtttgagcttatctactgacataagtacttgtgaaactgtttg 37968971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 380 - 445
Target Start/End: Original strand, 40335910 - 40335975
Alignment:
Q  380 ctttccaggatagcttatgaaagcaacttatagcttatat-caaaacaatttgaccttattttatct 445  Q
    ||||||| ||||||||||||||||| |||||| |||||||  |||||||||||  ||||||||||||    
T  40335910 ctttccaagatagcttatgaaagcagcttataacttatatgaaaaacaatttg-gcttattttatct 40335975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 284 - 370
Target Start/End: Complemental strand, 41419470 - 41419385
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacat 370  Q
    |||||||||| |||||||||| || | |||||||||||| |  |||||||| ||||||| | | ||| |||||| ||||||||||||    
T  41419470 tgtttggattgacttatttgagctaatctactgacataaat-tttgtgagattgtttgggataacttgtgaaaacagcttatgacat 41419385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 404 - 445
Target Start/End: Original strand, 583836 - 583877
Alignment:
Q  404 aacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||||||||||||| |||||| |||||| |||||||||||    
T  583836 aacttatagcttatatgaaaacagtttgactttattttatct 583877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 388 - 445
Target Start/End: Original strand, 9202795 - 9202852
Alignment:
Q  388 gatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||| ||||||||| || ||||| |||||||| |||||||||| || |||||||||||    
T  9202795 gataacttatgaaaacagcttattgcttatatgaaaacaatttaactttattttatct 9202852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 295 - 376
Target Start/End: Complemental strand, 11457238 - 11457157
Alignment:
Q  295 acttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccat 376  Q
    |||||||||| |||| ||| || || ||  |||||||||||||||| ||| ||||| || ||| | ||||||||||||||||    
T  11457238 acttatttgagcttatctattggcagaaacacttgtgagactgttttgaagagcttatggaaacaacttatgacatgtccat 11457157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 284 - 369
Target Start/End: Original strand, 16937802 - 16937886
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgaca 369  Q
    ||||||||||  ||||||||| |||| |||||  |||||||  |||||||| ||||||||| | ||| |||||| |||||||||||    
T  16937802 tgtttggattggcttatttgagcttatctactagcataagtt-ttgtgagagtgtttggaagaacttatgaaaacagcttatgaca 16937886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 284 - 337
Target Start/End: Complemental strand, 17369354 - 17369301
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactg 337  Q
    |||||||||| |||||||||| |||| ||||||||||||  |||||||| ||||    
T  17369354 tgtttggattgacttatttgaacttatctactgacataatcacttgtgacactg 17369301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 391 - 444
Target Start/End: Original strand, 18857450 - 18857503
Alignment:
Q  391 agcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatc 444  Q
    ||||||||||| || ||||||| |||||  ||||||||||||| ||||||||||    
T  18857450 agcttatgaaaacagcttatagattatagaaaaacaatttgactttattttatc 18857503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 388 - 445
Target Start/End: Complemental strand, 32172676 - 32172619
Alignment:
Q  388 gatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||||||||||| || ||||||||||||||  |||||| ||||| | |||||||||    
T  32172676 gatagcttatgaaaacagcttatagcttatatgtaaacaacttgacttcattttatct 32172619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 283 - 372
Target Start/End: Original strand, 34736445 - 34736533
Alignment:
Q  283 atgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgt 372  Q
    ||||||||||| |||||||||| |||| ||  ||||||||||  ||||||||| |||||| | | |||||||| | |||| |||||||||    
T  34736445 atgtttggattgacttatttgagcttatctggtgacataagt-tttgtgagacagtttgggagaacttttgaacacagctaatgacatgt 34736533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 380 - 441
Target Start/End: Complemental strand, 41016210 - 41016149
Alignment:
Q  380 ctttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttatttt 441  Q
    ||||||| ||| |||| ||||| ||||||||||||||||| |||||| |||||  |||||||    
T  41016210 ctttccatgatggcttgtgaaaacaacttatagcttatatgaaaacagtttgaatttatttt 41016149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 55; Significance: 4e-22; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 312 - 445
Target Start/End: Original strand, 32920370 - 32920504
Alignment:
Q  312 tactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatg-acatgtccatgaactttccaggatagcttatgaaagcaacttat 410  Q
    ||||| |||||| |||||||||||||||||  | ||| |  | || ||||||||| |||||||||| |||||| ||||||| ||||||||| ||||||||    
T  32920370 tactgccataagcacttgtgagactgtttgcgagagcatacggaagtagcttatgtacatgtccataaacttttcaggataacttatgaaaacaacttat 32920469  T
Q  411 agcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||| ||| ||||| ||||||| |||||||||||    
T  32920470 agcttctattaaaacgatttgactttattttatct 32920504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 297 - 372
Target Start/End: Complemental strand, 50298653 - 50298579
Alignment:
Q  297 ttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgt 372  Q
    |||||| | |||| ||||||||||||| |||||||||||||||||||||| ||| | |||||||||||||||||||    
T  50298653 ttattttagcttatctactgacataagcacttgtgagactgtttggaaaaacttat-aaaatagcttatgacatgt 50298579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 285 - 369
Target Start/End: Original strand, 15173223 - 15173306
Alignment:
Q  285 gtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgaca 369  Q
    ||||||||| |||||||||| |||| ||||||||||||||  |||||||||||||||| | |  || ||||||||||||||||||    
T  15173223 gtttggattgacttatttgaacttatctactgacataagt-tttgtgagactgtttgggagactttatgaaaatagcttatgaca 15173306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 311 - 367
Target Start/End: Complemental strand, 25497680 - 25497624
Alignment:
Q  311 ctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatga 367  Q
    ||||||||||||||||||||||||| |||||| ||||||| |||||||| |||||||    
T  25497680 ctactgacataagtacttgtgagacagtttggtaaagcttatgaaaatatcttatga 25497624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 296 - 372
Target Start/End: Complemental strand, 52172864 - 52172788
Alignment:
Q  296 cttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgt 372  Q
    ||||||||| ||||| ||||| |||||||| ||||||||||||| || ||| ||| |||||| ||||||||||||||    
T  52172864 cttatttgagcttacatactggcataagtatttgtgagactgttggggaaaacttatgaaaacagcttatgacatgt 52172788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 318 - 445
Target Start/End: Original strand, 3549508 - 3549635
Alignment:
Q  318 cataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatgaactttccaggatagcttatgaaagcaacttatagcttat 417  Q
    |||||| |||| ||||||||||||  | | ||| |||||||||  |||||||||||||  |||| || ||||||||| |||||||||||| |||| ||||    
T  3549508 cataagcacttatgagactgtttgagagaacttatgaaaatagtgtatgacatgtccacaaactatctaggatagctcatgaaagcaactcataggttat 3549607  T
Q  418 atcaaaacaatttgaccttattttatct 445  Q
    || ||||  ||||||  | |||||||||    
T  3549608 atgaaaatcatttgatttgattttatct 3549635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 352 - 446
Target Start/End: Original strand, 1408307 - 1408401
Alignment:
Q  352 tgaaaatagcttatgacatgtccatgaactttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatcta 446  Q
    |||||| ||||||| |||||||||| |||| || | | ||||||||||||||||||||||| |||||  |||||||| | || |||| |||||||    
T  1408307 tgaaaacagcttattacatgtccataaactctcgaagttagcttatgaaagcaacttatagattatacgaaaacaatataacgttatattatcta 1408401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 445
Target Start/End: Complemental strand, 2996601 - 2996539
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||| |||||||||||||| ||||||||| ||||||| |||||||||||||  ||||||||||    
T  2996601 tccaagatagcttatgaaaacaacttataacttatataaaaacaatttgactgtattttatct 2996539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 445
Target Start/End: Complemental strand, 10192312 - 10192250
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||||||||| ||||| ||||||||| ||||||| ||||||||||||| ||||| |||||    
T  10192312 tccaggatagcttttgaaaacaacttataacttatatgaaaacaatttgactttattctatct 10192250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 284 - 373
Target Start/End: Original strand, 27123271 - 27123360
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtc 373  Q
    ||||||||||||||||||||| ||||   |||  ||||||||||||||||||||||||  | ||||| || ||| | |||||||||||||    
T  27123271 tgtttggattaacttatttgagcttataaactagcataagtacttgtgagactgtttgagagagcttatggaaacaacttatgacatgtc 27123360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 388 - 445
Target Start/End: Complemental strand, 51630134 - 51630077
Alignment:
Q  388 gatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||||||||||  | ||||||||||||||||||||||||| || |||||||||||    
T  51630134 gatagcttatgaaaatagcttatagcttatatcaaaacaatttaactttattttatct 51630077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 298 - 378
Target Start/End: Original strand, 8328052 - 8328132
Alignment:
Q  298 tatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatga 378  Q
    ||||||| |||| ||| || |||||| |||| ||||||||||||||| ||||| |||||| |  |||||||||||||||||    
T  8328052 tatttgagcttatctattggcataagcacttatgagactgtttggaatagcttatgaaaacaatttatgacatgtccatga 8328132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 390 - 445
Target Start/End: Original strand, 13949893 - 13949948
Alignment:
Q  390 tagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||||  || ||||||||||||||||| ||||||||||||| |||||||||||    
T  13949893 tagcttatacaaacaacttatagcttatatgaaaacaatttgactttattttatct 13949948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 388 - 443
Target Start/End: Complemental strand, 49219162 - 49219107
Alignment:
Q  388 gatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttat 443  Q
    ||||| |||||||| ||||||||||||||||| |||| |||||||| |||||||||    
T  49219162 gatagtttatgaaaacaacttatagcttatatgaaaataatttgactttattttat 49219107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 290 - 376
Target Start/End: Complemental strand, 2996718 - 2996632
Alignment:
Q  290 gattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccat 376  Q
    ||||| ||||||||| ||||  || ||||||||| |||| ||||||||||||  | ||||| |||||| | ||||||||||||||||    
T  2996718 gattagcttatttgaacttatttattgacataagcacttttgagactgtttgagagagcttatgaaaacaacttatgacatgtccat 2996632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 284 - 370
Target Start/End: Original strand, 13126495 - 13126580
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacat 370  Q
    ||||||||||  ||||||| | |||||||||| ||||||||  |||||||||||||||||| | ||| | |||| ||||||||||||    
T  13126495 tgtttggattggcttattttagcttacctactaacataagtt-ttgtgagactgtttggaagaacttataaaaacagcttatgacat 13126580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 284 - 370
Target Start/End: Original strand, 17822784 - 17822869
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacat 370  Q
    ||||||||||||||||||||| |||| |||||||||||||| | ||||||||| ||| | | | | | |||||| ||||||||||||    
T  17822784 tgtttggattaacttatttgagcttatctactgacataagttc-tgtgagactatttaggagaacatatgaaaacagcttatgacat 17822869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 387 - 445
Target Start/End: Complemental strand, 18630704 - 18630646
Alignment:
Q  387 ggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||||| ||||| ||||||||||||||||| ||||| | ||||| |||||||||||    
T  18630704 ggatagcttgtgaaaacaacttatagcttatatgaaaaccaattgactttattttatct 18630646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 286 - 376
Target Start/End: Complemental strand, 25896933 - 25896843
Alignment:
Q  286 tttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccat 376  Q
    |||||||| ||||||||||  ||| |||||  ||| || |||||||||||||||| | | ||||| |  ||||||||||||||||||||||    
T  25896933 tttggattcacttatttgagtttatctactagcattagcacttgtgagactgtttaggagagcttatagaaatagcttatgacatgtccat 25896843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 284 - 366
Target Start/End: Original strand, 27043749 - 27043830
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatg 366  Q
    |||||||||| |||||||||| |||| ||||||||||||||  |||||| ||||||||||| |  || || ||||||||||||    
T  27043749 tgtttggattgacttatttgagcttatctactgacataagt-tttgtgaaactgtttggaagaagttatgcaaatagcttatg 27043830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 386 - 432
Target Start/End: Complemental strand, 42866093 - 42866047
Alignment:
Q  386 aggatagcttatgaaagcaacttatagcttatatcaaaacaatttga 432  Q
    |||||||||||||||| ||||||||||||||||| |||||| |||||    
T  42866093 aggatagcttatgaaaacaacttatagcttatataaaaacagtttga 42866047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 380 - 445
Target Start/End: Complemental strand, 927507 - 927442
Alignment:
Q  380 ctttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||| ||||||||||| || ||| ||||||||||||| |||||| |||||| |||||| ||||    
T  927507 ctttccatgatagcttatgcaaacaagttatagcttatatgaaaacagtttgactttatttcatct 927442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 287 - 344
Target Start/End: Complemental strand, 1017176 - 1017119
Alignment:
Q  287 ttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaa 344  Q
    ||||||| |||||||||| || | ||||||||||||  ||||||||||||||||||||    
T  1017176 ttggattgacttatttgagctaatctactgacataaacacttgtgagactgtttggaa 1017119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 298 - 367
Target Start/End: Original strand, 18628486 - 18628555
Alignment:
Q  298 tatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatga 367  Q
    ||||||| |||| ||||||||||||  |||||||||||||||||| | ||||| |||||| | |||||||    
T  18628486 tatttgagcttatctactgacataaacacttgtgagactgtttgggagagcttatgaaaacaacttatga 18628555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 390 - 443
Target Start/End: Complemental strand, 29778816 - 29778763
Alignment:
Q  390 tagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttat 443  Q
    |||||||||||| ||||||| ||||||||| |||||||||| |||||| |||||    
T  29778816 tagcttatgaaaacaacttacagcttatatgaaaacaatttcaccttaatttat 29778763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 383 - 432
Target Start/End: Original strand, 35517175 - 35517224
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttga 432  Q
    ||||||||||||||||||| || ||| |||||||||| ||||||||||||    
T  35517175 tccaggatagcttatgaaaacatcttctagcttatataaaaacaatttga 35517224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 372 - 445
Target Start/End: Original strand, 54325068 - 54325141
Alignment:
Q  372 tccatgaactttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||| |||| |||| |||||||| |||||  | |||||||||||||| |||||| |||||| |||||||||||    
T  54325068 tccataaactctccatgatagcttttgaaaatagcttatagcttatatgaaaacagtttgactttattttatct 54325141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 283 - 376
Target Start/End: Original strand, 55870260 - 55870353
Alignment:
Q  283 atgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccat 376  Q
    ||||||||||||||||||||||  ||| ||| ||||||||  | |||||||||| ||||  | ||||| |||||| || ||||||| |||||||    
T  55870260 atgtttggattaacttatttgagtttatctaatgacataaacatttgtgagactctttgagatagcttatgaaaaaagtttatgacctgtccat 55870353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 390 - 471
Target Start/End: Original strand, 55870390 - 55870471
Alignment:
Q  390 tagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatctactattagaaaaatggcttatgcata 471  Q
    |||||||||||| ||||||||||||||| | |||||| |||||| |||||| ||||  | ||| |||||||| |||| ||||    
T  55870390 tagcttatgaaaacaacttatagcttatgtgaaaacagtttgactttatttgatcttttgttataaaaatggattatacata 55870471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 385 - 445
Target Start/End: Complemental strand, 3175977 - 3175917
Alignment:
Q  385 caggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||||||||||||| || |||||| ||||  | ||||||||||||| |||||||||||    
T  3175977 caggatagcttatgaaaacagcttataacttacttgaaaacaatttgactttattttatct 3175917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 389 - 445
Target Start/End: Complemental strand, 4071904 - 4071848
Alignment:
Q  389 atagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||||| | | ||||||||||||||||| |||| |||||||| |||||||||||    
T  4071904 atagcttatcataacaacttatagcttatatgaaaataatttgactttattttatct 4071848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 284 - 372
Target Start/End: Original strand, 7367973 - 7368061
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgt 372  Q
    |||||||||| ||||||||||  ||| |||| | |||||   ||||||||||||||||| | ||||  |||||| ||||||||||||||    
T  7367973 tgtttggattgacttatttgagtttatctacaggcataaacgcttgtgagactgtttgggagagctcatgaaaacagcttatgacatgt 7368061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 361 - 445
Target Start/End: Complemental strand, 7730674 - 7730590
Alignment:
Q  361 cttatgacatgtccatgaactttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||||||||||||| | || ||||||||||||||||||| ||| || ||| | |||| |||||| |||  | |||||||||||    
T  7730674 cttatgacatgtccataagctctccaggatagcttatgaaaacaatttctagttaatataaaaacacttttgctttattttatct 7730590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 378 - 473
Target Start/End: Original strand, 8422876 - 8422969
Alignment:
Q  378 aactttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatctactattagaaaaatggcttatgcataag 473  Q
    |||| |||| ||||| || ||||| ||||||||||||||||| |||||||  |||| |||||||||||  | ||| |||||| |||||| ||||||    
T  8422876 aactctccaagatagattgtgaaaacaacttatagcttatatgaaaacaa--tgactttattttatctttttttataaaaatagcttatacataag 8422969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 284 - 336
Target Start/End: Original strand, 18512434 - 18512486
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagact 336  Q
    ||||| ||||||||||||||| |||| ||||||||||||  ||||||||||||    
T  18512434 tgtttcgattaacttatttgagcttatctactgacataaacacttgtgagact 18512486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 329 - 445
Target Start/End: Original strand, 19429476 - 19429592
Alignment:
Q  329 gtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatgaactttccaggatagcttatgaaagcaacttatagcttatatcaaaacaat 428  Q
    |||||||||||||| | ||||| || | | | |||||||||||||||| | |||   ||||||||||||||||  | ||||   ||||||| |||||| |    
T  19429476 gtgagactgtttgggagagcttatggagaaaacttatgacatgtccataagcttataaggatagcttatgaaaagagcttacgacttatataaaaacagt 19429575  T
Q  429 ttgaccttattttatct 445  Q
    ||||| |||||||||||    
T  19429576 ttgactttattttatct 19429592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 311 - 367
Target Start/End: Complemental strand, 22523804 - 22523748
Alignment:
Q  311 ctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatga 367  Q
    |||||||||||||||||||||||||||||||    | ||| ||||||||||||||||    
T  22523804 ctactgacataagtacttgtgagactgtttgagtcaacttatgaaaatagcttatga 22523748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 372 - 440
Target Start/End: Complemental strand, 24091502 - 24091434
Alignment:
Q  372 tccatgaactttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattt 440  Q
    ||||| ||| |||||||||| ||||||||| ||  ||||||||||||| |||| |||||||| ||||||    
T  24091502 tccataaaccttccaggataacttatgaaaacagtttatagcttatatgaaaataatttgactttattt 24091434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 378 - 442
Target Start/End: Complemental strand, 35958688 - 35958624
Alignment:
Q  378 aactttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttatttta 442  Q
    |||| ||||||||||||||||||| || ||| |||||||||| |||  |||||||| ||||||||    
T  35958688 aactctccaggatagcttatgaaaacagcttctagcttatataaaacaaatttgactttatttta 35958624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 386 - 445
Target Start/End: Original strand, 24370998 - 24371057
Alignment:
Q  386 aggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||||||||||||| ||||||||||||| | | ||| ||||||||  |||||||||||    
T  24370998 aggatagcttatgaaaacaacttatagcttttgtaaaagcaatttgaatttattttatct 24371057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 385 - 444
Target Start/End: Complemental strand, 29263396 - 29263337
Alignment:
Q  385 caggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatc 444  Q
    ||||||||||||||||| |||||||| |||||| | |||||||| | || ||||||||||    
T  29263396 caggatagcttatgaaaacaacttatcgcttatttgaaaacaatgtaactttattttatc 29263337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 389 - 442
Target Start/End: Original strand, 7368103 - 7368157
Alignment:
Q  389 atagcttatgaaagcaacttata-gcttatatcaaaacaatttgaccttatttta 442  Q
    |||||||||| || ||||||||| |||||||| ||||||||||||| ||||||||    
T  7368103 atagcttatggaaacaacttataagcttatatgaaaacaatttgactttatttta 7368157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 478 - 512
Target Start/End: Complemental strand, 7730547 - 7730513
Alignment:
Q  478 atataataagtgtttaattaagttgtttatccaaa 512  Q
    |||||||||||| ||||||||||||||||||||||    
T  7730547 atataataagtgcttaattaagttgtttatccaaa 7730513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 382 - 424
Target Start/End: Complemental strand, 9841095 - 9841053
Alignment:
Q  382 ttccaggatagcttatgaaagcaacttatagcttatatcaaaa 424  Q
    |||||||||||||||||||| || |||||||||||||| ||||    
T  9841095 ttccaggatagcttatgaaaacatcttatagcttatatgaaaa 9841053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 296 - 350
Target Start/End: Complemental strand, 21157907 - 21157853
Alignment:
Q  296 cttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagctt 350  Q
    ||||||||| || | ||||||||||||| |||||| ||||||||||||| |||||    
T  21157907 cttatttgagctcatctactgacataagcacttgtaagactgtttggaagagctt 21157853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 359 - 466
Target Start/End: Original strand, 29373903 - 29374012
Alignment:
Q  359 agcttatgacatgtcc--atgaactttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatctactattagaaa 456  Q
    |||||||||| |||||  || |||||| ||  ||| ||||||||| ||| ||||||||||||| || ||| |||||| ||||||||||| || ||| | |    
T  29373903 agcttatgacgtgtccgtataaacttttcaaaataacttatgaaaacaaattatagcttatatgaatacattttgacattattttatcttctgttataga 29374002  T
Q  457 aatggcttat 466  Q
    ||| ||||||    
T  29374003 aatagcttat 29374012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 390 - 432
Target Start/End: Original strand, 30207620 - 30207662
Alignment:
Q  390 tagcttatgaaagcaacttatagcttatatcaaaacaatttga 432  Q
    |||||||||||| ||||||||||||||||| |||||| |||||    
T  30207620 tagcttatgaaaacaacttatagcttatatgaaaacagtttga 30207662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 286 - 336
Target Start/End: Original strand, 32420979 - 32421029
Alignment:
Q  286 tttggattaacttatttgatcttacctactgacataagtacttgtgagact 336  Q
    |||||||| |||||||||| ||||||||||  |||||| ||||||||||||    
T  32420979 tttggattgacttatttgagcttacctactagcataagcacttgtgagact 32421029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 387 - 445
Target Start/End: Original strand, 43372015 - 43372073
Alignment:
Q  387 ggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||||||||||| ||  ||||||||||||| |||||| ||||||  ||||||||||    
T  43372015 ggatagcttatgaaatcagtttatagcttatataaaaacagtttgactgtattttatct 43372073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 372 - 433
Target Start/End: Original strand, 7694041 - 7694102
Alignment:
Q  372 tccatgaactttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgac 433  Q
    ||||| |||| ||||||||| ||||||||| || |||||||||||||  |||||| ||||||    
T  7694041 tccataaactctccaggataacttatgaaaacagcttatagcttatacaaaaacagtttgac 7694102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 295 - 340
Target Start/End: Complemental strand, 7731829 - 7731784
Alignment:
Q  295 acttatttgatcttacctactgacataagtacttgtgagactgttt 340  Q
    |||||||||| |||||||||||||| ||| |||||| |||||||||    
T  7731829 acttatttgaacttacctactgacacaagcacttgtaagactgttt 7731784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 445
Target Start/End: Complemental strand, 11917570 - 11917525
Alignment:
Q  400 aagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||||||||| |||||| |||| |||||||| |||||||||||    
T  11917570 aagcaacttataggttatatgaaaataatttgactttattttatct 11917525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 327 - 376
Target Start/End: Complemental strand, 23819197 - 23819148
Alignment:
Q  327 ttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccat 376  Q
    |||||||||||||||||| || ||  ||||| ||||||||||||||||||    
T  23819197 ttgtgagactgtttggaagagtttaagaaaacagcttatgacatgtccat 23819148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 388 - 445
Target Start/End: Complemental strand, 25885882 - 25885825
Alignment:
Q  388 gatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||| ||||||||| |||||||||||||| |  |||||||||| || |||||||||||    
T  25885882 gataacttatgaaaacaacttatagcttacacgaaaacaatttaactttattttatct 25885825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 407 - 476
Target Start/End: Complemental strand, 30024704 - 30024635
Alignment:
Q  407 ttatagcttatatcaaaacaatttgaccttattttatctactattagaaaaatggcttatgcataagtac 476  Q
    ||||||||||||| |||||||||| || |||||||||||  | ||| | ||||  |||||||||||||||    
T  30024704 ttatagcttatatgaaaacaattttactttattttatcttttgttatagaaataacttatgcataagtac 30024635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 406 - 451
Target Start/End: Original strand, 31038932 - 31038977
Alignment:
Q  406 cttatagcttatatcaaaacaatttgaccttattttatctactatt 451  Q
    |||||| ||||||| ||||||||||||| |||||||||||| ||||    
T  31038932 cttataacttatatgaaaacaatttgactttattttatctattatt 31038977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 388 - 445
Target Start/End: Original strand, 47119012 - 47119069
Alignment:
Q  388 gatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||| ||||||  ||||||||||||||||| |||||||||| || || ||||||||    
T  47119012 gatagcatatgaatacaacttatagcttatatgaaaacaatttaactttgttttatct 47119069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 392 - 445
Target Start/End: Complemental strand, 53626795 - 53626742
Alignment:
Q  392 gcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||||||| || |||||||||||||| |||||| |||||  |||||||||||    
T  53626795 gcttatgaaaacagcttatagcttatatgaaaacattttgaatttattttatct 53626742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 2e-20; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 286 - 445
Target Start/End: Original strand, 28803451 - 28803610
Alignment:
Q  286 tttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatgaactttcc 385  Q
    |||||||| |||||||||| |||| |||| | |||||| || ||||||||||||||  | | | | || ||| | |||||||||||||||| | || |||    
T  28803451 tttggattgacttatttgagcttatctaccggcataagcacatgtgagactgtttgagagaacatatggaaacaacttatgacatgtccataagctctcc 28803550  T
Q  386 aggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||| ||| |||| |||||| |||||||||| ||| || |||||| |||||||||||    
T  28803551 aggatagtttaagaaaacaacttgtagcttatatgaaatcagtttgactttattttatct 28803610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 281 - 371
Target Start/End: Complemental strand, 40944067 - 40943977
Alignment:
Q  281 gtatgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatg 371  Q
    |||||||||||||| |||||||||  ||| ||| ||||||||| |||||||| |||||||||||||| || |||||| |||||||||||||    
T  40944067 gtatgtttggattagcttatttgagtttatctaatgacataagcacttgtgaaactgtttggaaaagtttatgaaaacagcttatgacatg 40943977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 383 - 445
Target Start/End: Complemental strand, 11513926 - 11513864
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||| |||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||    
T  11513926 tccatgatagcttatgaaaacaacttatagcttatatgaaaacaatttgactttattttatct 11513864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 362 - 445
Target Start/End: Complemental strand, 10143221 - 10143138
Alignment:
Q  362 ttatgacatgtccatgaactttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||||| ||||| |||| |||| ||||||||||||||  |||||||||||||||| |||||| |||||| | |||||||||    
T  10143221 ttatgacatatccataaactctccatgatagcttatgaaaaaaacttatagcttatataaaaacagtttgacttaattttatct 10143138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 297 - 376
Target Start/End: Complemental strand, 29430896 - 29430817
Alignment:
Q  297 ttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccat 376  Q
    |||||||| |||| ||||||||||||  ||||||| |||| ||||||| | ||| |||||||||||||||||||||||||    
T  29430896 ttatttgagcttatctactgacataaacacttgtgggactatttggaagaacttatgaaaatagcttatgacatgtccat 29430817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 282 - 342
Target Start/End: Complemental strand, 22878251 - 22878191
Alignment:
Q  282 tatgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttgg 342  Q
    |||||||||||| |||||||||| |||| | ||||||||||| ||||||||||||||||||    
T  22878251 tatgtttggattgacttatttgagcttatccactgacataagcacttgtgagactgtttgg 22878191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 445
Target Start/End: Original strand, 5043602 - 5043664
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||| |||||||||||||| |||||| |||||||||| |||||| |||||| |||||||||||    
T  5043602 tccatgatagcttatgaaaacaacttctagcttatatgaaaacagtttgactttattttatct 5043664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 389 - 446
Target Start/End: Original strand, 33931618 - 33931675
Alignment:
Q  389 atagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatcta 446  Q
    ||||||||||||| || |||||||||||||  |||||||| |||||||||||||||||    
T  33931618 atagcttatgaaaacagcttatagcttatacaaaaacaatctgaccttattttatcta 33931675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 372 - 445
Target Start/End: Complemental strand, 43141910 - 43141837
Alignment:
Q  372 tccatgaactttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||| |||| | ||||||||||||||||| || ||||||||||||||  |||||||||||| ||| |||||||    
T  43141910 tccataaactcttcaggatagcttatgaaaacatcttatagcttatatggaaacaatttgactttactttatct 43141837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 318 - 442
Target Start/End: Complemental strand, 1318353 - 1318229
Alignment:
Q  318 cataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatgaactttccaggatagcttatgaaagcaacttatagcttat 417  Q
    |||||| |||||||||||||||||  | ||||| |||||| | |||||||||||||||  | || || ||||| |||| |||||  |||||||||| | |    
T  1318353 cataagcacttgtgagactgtttgtgagagcttatgaaaacatcttatgacatgtccagaagctctctaggatggcttgtgaaaataacttatagcatct 1318254  T
Q  418 atcaaaacaatttgaccttatttta 442  Q
    || ||||||| ||||| | ||||||    
T  1318253 atgaaaacaagttgacttcatttta 1318229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 389 - 445
Target Start/End: Original strand, 6993772 - 6993828
Alignment:
Q  389 atagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||||||||| |||| |||||||||||| || | ||||||||||||||||||||    
T  6993772 atagcttatgaaaacaacctatagcttatatgaatataatttgaccttattttatct 6993828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 285 - 381
Target Start/End: Original strand, 43456627 - 43456723
Alignment:
Q  285 gtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatgaact 381  Q
    ||||||||| |||||||||| ||||  |||| ||||||  |||||| |||||||||| || ||||| |||||| | || ||||||||||||| ||||    
T  43456627 gtttggatttacttatttgaacttatttactcacataaacacttgtaagactgtttgaaagagcttgtgaaaacaactcatgacatgtccataaact 43456723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 387 - 445
Target Start/End: Complemental strand, 4090373 - 4090315
Alignment:
Q  387 ggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||||||||| || |||||||||| ||||| | |||||||||||| |||||||||||    
T  4090373 ggatagcttatgtaaacaacttatagattataccgaaacaatttgactttattttatct 4090315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 284 - 342
Target Start/End: Original strand, 15370242 - 15370300
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttgg 342  Q
    |||||||||| |||||||||| |||| |||||| |||||| | ||||||||||||||||    
T  15370242 tgtttggattgacttatttgagcttatctactggcataagcatttgtgagactgtttgg 15370300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 383 - 445
Target Start/End: Original strand, 17952743 - 17952805
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||||||||||||||| || ||| |||||||||| |||| | |||||| |||||||||||    
T  17952743 tccaggatagcttatgaaaacatcttgtagcttatatgaaaatagtttgactttattttatct 17952805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 319 - 397
Target Start/End: Complemental strand, 32837439 - 32837361
Alignment:
Q  319 ataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatgaactttccaggatagcttat 397  Q
    |||||||||||||||||||||||| | | ||| |||||| ||||||| |||||||||| | ||||| | ||||| ||||    
T  32837439 ataagtacttgtgagactgtttgggagaacttatgaaaacagcttataacatgtccattagctttcaaagataggttat 32837361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 286 - 372
Target Start/End: Complemental strand, 40158867 - 40158781
Alignment:
Q  286 tttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgt 372  Q
    ||||||||  ||||||||| | || ||||||||||||| ||||||||||||| ||||   | ||| |||||| ||||||||||||||    
T  40158867 tttggattggcttatttgagcatatctactgacataagaacttgtgagactgattgggggaacttatgaaaacagcttatgacatgt 40158781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 383 - 440
Target Start/End: Complemental strand, 18066156 - 18066099
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattt 440  Q
    |||| |||||||||||||| || |||||||||||||| |||||||||| || ||||||    
T  18066156 tccaagatagcttatgaaaacagcttatagcttatatgaaaacaatttaactttattt 18066099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 383 - 424
Target Start/End: Original strand, 18179282 - 18179323
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaa 424  Q
    |||||||||||||||||||||| |||||||||||||| ||||    
T  18179282 tccaggatagcttatgaaagcagcttatagcttatatgaaaa 18179323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 296 - 369
Target Start/End: Complemental strand, 25609935 - 25609862
Alignment:
Q  296 cttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgaca 369  Q
    ||||||||| |||| ||||| ||||||| ||||||||||||| |||||| ||||| || ||| | |||||||||    
T  25609935 cttatttgagcttatctactaacataagaacttgtgagactgcttggaatagcttatggaaacaacttatgaca 25609862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 386 - 443
Target Start/End: Complemental strand, 29936028 - 29935971
Alignment:
Q  386 aggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttat 443  Q
    ||||||||||||||||  ||||||||||||| ||  |||||||||||| |||||||||    
T  29936028 aggatagcttatgaaaaaaacttatagcttacatggaaacaatttgacgttattttat 29935971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 284 - 369
Target Start/End: Complemental strand, 30331902 - 30331818
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgaca 369  Q
    |||||||||| |||||||| | |||| ||||||||||||||  |||||||||||||||| | | ||| |||||| | |||||||||    
T  30331902 tgtttggattgacttatttcagcttatctactgacataagt-tttgtgagactgtttgggagaacttatgaaaaaaccttatgaca 30331818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 392 - 445
Target Start/End: Complemental strand, 33942169 - 33942116
Alignment:
Q  392 gcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||||||| |||||||||||||| || |||||| |||||| |||||||||||    
T  33942169 gcttatgaaaacaacttatagcttacatgaaaacagtttgactttattttatct 33942116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 288 - 369
Target Start/End: Complemental strand, 33981270 - 33981189
Alignment:
Q  288 tggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgaca 369  Q
    ||||||| ||||||||| ||||||||||  | |||| |||||||||||||| || |||| ||| ||||||  ||||||||||    
T  33981270 tggattagcttatttgagcttacctactagcttaagcacttgtgagactgtctgaaaaaacttatgaaaacggcttatgaca 33981189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 383 - 424
Target Start/End: Complemental strand, 39983370 - 39983329
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaa 424  Q
    ||||||||||||||||||| ||||||||||||||||| ||||    
T  39983370 tccaggatagcttatgaaaacaacttatagcttatatgaaaa 39983329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 315 - 376
Target Start/End: Original strand, 44606060 - 44606121
Alignment:
Q  315 tgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccat 376  Q
    ||||||||||||||||  |||||||||||| | ||| |||||| | ||||||||||||||||    
T  44606060 tgacataagtacttgtacgactgtttggaagaacttatgaaaacaacttatgacatgtccat 44606121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 325 - 381
Target Start/End: Original strand, 5902509 - 5902565
Alignment:
Q  325 acttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatgaact 381  Q
    |||||||||||||||||||| | ||| |||||| |||||||||||||| ||| ||||    
T  5902509 acttgtgagactgtttggaagaacttatgaaaacagcttatgacatgttcataaact 5902565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 284 - 372
Target Start/End: Original strand, 12313092 - 12313180
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgt 372  Q
    |||||| |||| |||||||||||||||| |||  |||||| |||||||||| ||||||| | |  || |||||| |||||||| |||||    
T  12313092 tgtttgtattagcttatttgatcttacccactagcataagcacttgtgagattgtttgggagaatttatgaaaacagcttatgccatgt 12313180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 285 - 373
Target Start/End: Complemental strand, 16503503 - 16503415
Alignment:
Q  285 gtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtc 373  Q
    ||||| |||| |||||||||  ||| ||| || ||||||||||||||| ||||||||| | |||||    |||||||||||||||||||    
T  16503503 gtttgaattaccttatttgagattatctagtggcataagtacttgtgacactgtttgggagagcttagagaaatagcttatgacatgtc 16503415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 393 - 441
Target Start/End: Original strand, 35755554 - 35755602
Alignment:
Q  393 cttatgaaagcaacttatagcttatatcaaaacaatttgaccttatttt 441  Q
    ||||||||| |||||||||||||| || ||||||||||||| |||||||    
T  35755554 cttatgaaaacaacttatagcttacatgaaaacaatttgactttatttt 35755602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 286 - 362
Target Start/End: Original strand, 42852623 - 42852699
Alignment:
Q  286 tttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagct 362  Q
    ||||||||  ||||||||| |||| || ||| |||||| |||||||||||||||||||| ||| | |||||| ||||    
T  42852623 tttggatttgcttatttgaacttatctgctggcataagcacttgtgagactgtttggaagagcctatgaaaacagct 42852699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 282 - 341
Target Start/End: Complemental strand, 13867031 - 13866972
Alignment:
Q  282 tatgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttg 341  Q
    |||||||||||| || ||||||| |||| |||||| |||||  |||||||||||||||||    
T  13867031 tatgtttggattgacctatttgagcttatctactgccataaacacttgtgagactgtttg 13866972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 383 - 442
Target Start/End: Original strand, 15866710 - 15866769
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttatttta 442  Q
    ||||||||||||||||||||   |||||||||||||| ||||||| | ||| ||||||||    
T  15866710 tccaggatagcttatgaaagtggcttatagcttatatgaaaacaagtcgactttatttta 15866769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 386 - 445
Target Start/End: Original strand, 22681230 - 22681289
Alignment:
Q  386 aggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||| |||||||| || |||||||||||||| ||||||||||| | || ||||||||    
T  22681230 aggatagattatgaaaacagcttatagcttatatgaaaacaatttggctttgttttatct 22681289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 396 - 443
Target Start/End: Complemental strand, 33944620 - 33944573
Alignment:
Q  396 atgaaagcaacttatagcttatatcaaaacaatttgaccttattttat 443  Q
    |||||| ||| ||||||||||||| ||||||||||||| |||||||||    
T  33944620 atgaaaacaatttatagcttatatgaaaacaatttgactttattttat 33944573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 378 - 445
Target Start/End: Original strand, 37292384 - 37292451
Alignment:
Q  378 aactttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||| |||||||||||||| |||| ||||| ||||||||||| |||| | ||| || |||||||||||    
T  37292384 aactctccaggatagcttaagaaaacaactaatagcttatatgaaaatagttttactttattttatct 37292451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 284 - 367
Target Start/End: Complemental strand, 41170761 - 41170678
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatga 367  Q
    ||||||||||  |||||||||  ||| ||||| ||||||  |||||||||||| ||||||| | ||| ||||||||| ||||||    
T  41170761 tgtttggattggcttatttgagtttatctactaacataaacacttgtgagactatttggaataacttatgaaaatagtttatga 41170678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 483 - 521
Target Start/End: Original strand, 6772695 - 6772733
Alignment:
Q  483 ataagtgtttaattaagttgtttatccaaacagcgtctt 521  Q
    ||||||| ||||||||||||||||||||||||| |||||    
T  6772695 ataagtgcttaattaagttgtttatccaaacagagtctt 6772733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 388 - 445
Target Start/End: Original strand, 7103529 - 7103587
Alignment:
Q  388 gatagcttatgaaag-caacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||||||||||  || |||||||||||||| |||||| |||||| |||||||||||    
T  7103529 gatagcttatgaaaaacagcttatagcttatattaaaacagtttgactttattttatct 7103587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 295 - 349
Target Start/End: Original strand, 14277823 - 14277877
Alignment:
Q  295 acttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagct 349  Q
    ||||||||||  ||| |||| ||||||||||||||||||| ||||||||| ||||    
T  14277823 acttatttgagtttatctacggacataagtacttgtgagagtgtttggaagagct 14277877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 388 - 430
Target Start/End: Complemental strand, 25800852 - 25800810
Alignment:
Q  388 gatagcttatgaaagcaacttatagcttatatcaaaacaattt 430  Q
    |||||||||||||| || |||||||||||||| ||||||||||    
T  25800852 gatagcttatgaaaacagcttatagcttatatgaaaacaattt 25800810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 383 - 445
Target Start/End: Original strand, 29316817 - 29316879
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||| ||||||| |||||| || ||||||| |||| | |||||||||| ||||||||||||||    
T  29316817 tccaagatagctgatgaaaacagcttatagattatgtgaaaacaatttaaccttattttatct 29316879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 391 - 445
Target Start/End: Complemental strand, 40145482 - 40145428
Alignment:
Q  391 agcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||||||| ||||||||| |||| || ||||||| ||||| |||||||||||    
T  40145482 agcttatgaaaacaacttataacttacataaaaacaacttgactttattttatct 40145428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 383 - 445
Target Start/End: Complemental strand, 43199442 - 43199380
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||||||| |||||||| ||||||||||||||||  || | ||||| || |||||||||||    
T  43199442 tccaggatagtttatgaaaacaacttatagcttatacgaagataatttaactttattttatct 43199380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 284 - 342
Target Start/End: Complemental strand, 43199986 - 43199928
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttgg 342  Q
    |||||||||| | |||||||| |||| ||||| | ||||| ||||||||||||||||||    
T  43199986 tgtttggattcatttatttgaacttatctactcatataagcacttgtgagactgtttgg 43199928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 388 - 445
Target Start/End: Original strand, 656824 - 656881
Alignment:
Q  388 gatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||||||||||| ||||||| ||||||||  ||||||||||||   ||||||||||    
T  656824 gatagcttatgaaatcaacttacagcttatacgaaaacaatttgattatattttatct 656881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 311 - 376
Target Start/End: Complemental strand, 787456 - 787391
Alignment:
Q  311 ctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccat 376  Q
    |||||| |||||| |||||||| ||||||||  | | ||| |||||| ||||||||||||||||||    
T  787456 ctactggcataagcacttgtgacactgtttgtgagaacttatgaaaacagcttatgacatgtccat 787391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 383 - 440
Target Start/End: Complemental strand, 1625928 - 1625871
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattt 440  Q
    |||| |||||||||||||| ||||||||| ||||||  |||||||||| || ||||||    
T  1625928 tccaagatagcttatgaaaacaacttataacttatacgaaaacaatttaactttattt 1625871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 283 - 372
Target Start/End: Original strand, 2964727 - 2964816
Alignment:
Q  283 atgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgt 372  Q
    |||||||||||||||||||||| |||| |||| | |||||  ||||| |||| ||||||    | ||| |||||| ||||||||||||||    
T  2964727 atgtttggattaacttatttgaacttatctaccggcataaacacttgcgagaatgtttgagtgaacttatgaaaacagcttatgacatgt 2964816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 445
Target Start/End: Original strand, 3423827 - 3423872
Alignment:
Q  400 aagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||||||||| |||||| |||| |||||||| |||||||||||    
T  3423827 aagcaacttataggttatatgaaaataatttgactttattttatct 3423872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 284 - 381
Target Start/End: Complemental strand, 4350841 - 4350744
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatgaact 381  Q
    ||||||||||  ||||||||| |||  ||||||||||||| ||||  |||| ||||||  | | ||| |||||| |||||||||||||| ||| ||||    
T  4350841 tgtttggattggcttatttgagcttctctactgacataagcacttaagagattgtttgagagaacttatgaaaacagcttatgacatgttcataaact 4350744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 5759529 - 5759585
Alignment:
Q  319 ataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccat 376  Q
    |||||||||||||||||||||||| | ||||| || ||| |||||| |||||||||||    
T  5759529 ataagtacttgtgagactgtttgggagagcttatggaaacagctta-gacatgtccat 5759585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 382 - 419
Target Start/End: Complemental strand, 9886341 - 9886304
Alignment:
Q  382 ttccaggatagcttatgaaagcaacttatagcttatat 419  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  9886341 ttccaggatagcttaggaaaacaacttatagcttatat 9886304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 394 - 514
Target Start/End: Complemental strand, 10150772 - 10150651
Alignment:
Q  394 ttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatctactattagaaaaatggcttatgcataagtaca-atataataagtgttt 492  Q
    |||||||| |||||| ||  || ||| ||||| |||| || |||||||||||  ||||| | ||||  ||||| |||||  ||  |||||||||||| ||    
T  10150772 ttatgaaaacaacttgtaaattctatgaaaaccatttaacgttattttatcttttattatagaaataacttatacataaacacttatataataagtgctt 10150673  T
Q  493 aattaagttgtttatccaaaca 514  Q
    |||||||||||||||| |||||    
T  10150672 aattaagttgtttatctaaaca 10150651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 388 - 445
Target Start/End: Complemental strand, 14666571 - 14666514
Alignment:
Q  388 gatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||||| ||||| ||||||||| ||||||| ||| || |||||| |||||||||||    
T  14666571 gatagcttgtgaaaacaacttataacttatatgaaatcagtttgactttattttatct 14666514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 483 - 524
Target Start/End: Original strand, 33197397 - 33197438
Alignment:
Q  483 ataagtgtttaattaagttgtttatccaaacagcgtcttagt 524  Q
    |||||||||||||| |||||||||||||||||| | ||||||    
T  33197397 ataagtgtttaatttagttgtttatccaaacagagccttagt 33197438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 385 - 446
Target Start/End: Complemental strand, 33256766 - 33256705
Alignment:
Q  385 caggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatcta 446  Q
    |||||| |||||||||| |  ||||||| |||||| |||||| |||||| ||||||||||||    
T  33256766 caggatggcttatgaaaactgcttatagtttatatgaaaacagtttgactttattttatcta 33256705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 389 - 430
Target Start/End: Complemental strand, 40279219 - 40279178
Alignment:
Q  389 atagcttatgaaagcaacttatagcttatatcaaaacaattt 430  Q
    ||||||||||||| ||||||||| |||||| |||||||||||    
T  40279219 atagcttatgaaaacaacttatatcttataccaaaacaattt 40279178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 1e-18; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 307 - 443
Target Start/End: Original strand, 28340363 - 28340498
Alignment:
Q  307 ttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatgaactttccaggatagcttatgaaagcaac 406  Q
    ||||| |||| ||||||  |||||||||||||| ||| | |||| |||||| | |||||||||||||||| | || ||||| ||||||| ||||| ||||    
T  28340363 ttaccaactggcataagctcttgtgagactgttgggaga-gcttatgaaaacaacttatgacatgtccataagctctccagcatagcttctgaaaacaac 28340461  T
Q  407 ttatagcttatatcaaaacaatttgaccttattttat 443  Q
    ||||| |||| || |||||| |||||| |||||||||    
T  28340462 ttataacttacatgaaaacagtttgactttattttat 28340498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 283 - 376
Target Start/End: Complemental strand, 33894779 - 33894686
Alignment:
Q  283 atgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccat 376  Q
    |||||||||||| ||||||||| |||| | | ||||||||| |||||||||||||||||  | ||||| |||||| ||| ||||||||||||||    
T  33894779 atgtttggattagcttatttgagcttatcaaatgacataagcacttgtgagactgtttgtgagagcttatgaaaacagcatatgacatgtccat 33894686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 372 - 445
Target Start/End: Original strand, 5006540 - 5006613
Alignment:
Q  372 tccatgaactttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||||||| |||||| |||||||||||| ||| ||||| ||||||| |||||| |||||| |||||||||||    
T  5006540 tccatgaactctccagggtagcttatgaaaacaatttataccttatatgaaaacagtttgactttattttatct 5006613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 388 - 445
Target Start/End: Complemental strand, 12110383 - 12110326
Alignment:
Q  388 gatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||||||||||| || ||||||||||||| |||||||||||||| |||||||||||    
T  12110383 gatagcttatgaaaacagcttatagcttataccaaaacaatttgactttattttatct 12110326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 390 - 445
Target Start/End: Complemental strand, 1417285 - 1417230
Alignment:
Q  390 tagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||||||||| |||||||| |||||||| ||||||||||||| |||||||||||    
T  1417285 tagcttatgaaaacaacttattgcttatatgaaaacaatttgactttattttatct 1417230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 283 - 342
Target Start/End: Complemental strand, 30751671 - 30751612
Alignment:
Q  283 atgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttgg 342  Q
    |||||||||||||||||||| | |||| ||||||||||||| ||||||| ||||||||||    
T  30751671 atgtttggattaacttatttaaacttatctactgacataagcacttgtgcgactgtttgg 30751612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 327 - 445
Target Start/End: Complemental strand, 946836 - 946718
Alignment:
Q  327 ttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatgaactttccaggatagcttatgaaagcaacttatagcttatatcaaaaca 426  Q
    |||||||||||||| ||| | ||| ||||||||| ||||||||||| ||| | | || ||||||| || |  ||| ||||||||| || |||  ||||||    
T  946836 ttgtgagactgtttagaagaacttatgaaaatagtttatgacatgttcattagcctttcaggataactcacaaaaacaacttataactaatacgaaaaca 946737  T
Q  427 atttgaccttattttatct 445  Q
    ||||||| |||||||||||    
T  946736 atttgactttattttatct 946718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 286 - 370
Target Start/End: Original strand, 3836604 - 3836688
Alignment:
Q  286 tttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacat 370  Q
    ||||||||  ||||||||| |||| |||||| | |||| |||||||| ||||||||| | | ||| |||||||||||||||||||    
T  3836604 tttggattgccttatttgagcttatctactggcttaagcacttgtgaaactgtttgggagaacttatgaaaatagcttatgacat 3836688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 286 - 342
Target Start/End: Complemental strand, 8427162 - 8427106
Alignment:
Q  286 tttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttgg 342  Q
    |||||||| | |||||||| |||| ||||| ||||||||||||||||||||||||||    
T  8427162 tttggattgatttatttgagcttatctactaacataagtacttgtgagactgtttgg 8427106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 325 - 404
Target Start/End: Complemental strand, 17759636 - 17759557
Alignment:
Q  325 acttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatgaactttccaggatagcttatgaaagca 404  Q
    ||||| |||| || |||| ||||||| | |||| |||||||| |||||||||||  ||||||||||| ||||||||||||    
T  17759636 acttgggagagtggttgggaaagcttatcaaaacagcttatgccatgtccatgagttttccaggatatcttatgaaagca 17759557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 383 - 445
Target Start/End: Complemental strand, 27548291 - 27548229
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||| |||||||||||||| || ||||||||||| || ||||||||| ||| |||||||||||    
T  27548291 tccaagatagcttatgaaaacagcttatagcttaaatgaaaacaattagactttattttatct 27548229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 383 - 445
Target Start/End: Original strand, 30456492 - 30456554
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||| ||||| |||||||| | ||||||| ||||||| ||||||||||||| |||||||||||    
T  30456492 tccaagatagtttatgaaaaccacttataacttatatgaaaacaatttgactttattttatct 30456554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 284 - 370
Target Start/End: Complemental strand, 34036068 - 34035983
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacat 370  Q
    |||||| ||| |||||||||| |||| ||||||||||| ||| ||||||||||  |||||| | ||| |||||||| ||||||||||    
T  34036068 tgtttgaattgacttatttgagcttatctactgacatatgta-ttgtgagactacttggaagaacttatgaaaataacttatgacat 34035983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 383 - 445
Target Start/End: Original strand, 40689028 - 40689090
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||||||||||||||  || |||||||||||||| |||| ||||| || |||||||||||    
T  40689028 tccaggatagcttatgaacacagcttatagcttatatgaaaataatttaactttattttatct 40689090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 386 - 444
Target Start/End: Original strand, 47046153 - 47046211
Alignment:
Q  386 aggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatc 444  Q
    |||||||||||||||| |||||   ||||||||| ||||||||||||| ||||||||||    
T  47046153 aggatagcttatgaaaacaactcggagcttatatgaaaacaatttgactttattttatc 47046211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 284 - 376
Target Start/End: Complemental strand, 24048691 - 24048601
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccat 376  Q
    |||||| ||| ||||||||||  ||| ||||||||||||||||||   ||||||||||||| ||||| ||  | ||||||||| |||||||||    
T  24048691 tgtttgaatttacttatttgagtttatctactgacataagtacttaaaagactgtttggaagagcttatg--attagcttatgtcatgtccat 24048601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 386 - 459
Target Start/End: Original strand, 28340889 - 28340962
Alignment:
Q  386 aggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatctactattagaaaaat 459  Q
    |||||||||||||||| || |||||||||||||| | ||||||||||| | |||| ||||  ||||| ||||||    
T  28340889 aggatagcttatgaaaacagcttatagcttatatgacaacaatttgacttcatttcatcttttattataaaaat 28340962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 320 - 376
Target Start/End: Original strand, 22388447 - 22388503
Alignment:
Q  320 taagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccat 376  Q
    ||||| ||||||||||||||||| ||||||| || |||||||||| || ||||||||    
T  22388447 taagtgcttgtgagactgtttggtaaagcttatggaaatagcttaagatatgtccat 22388503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 284 - 340
Target Start/End: Complemental strand, 29363659 - 29363603
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgttt 340  Q
    ||||||||||  ||||||||| |||| ||||| ||||||| ||||||||||||||||    
T  29363659 tgtttggattggcttatttgaacttatctactaacataagcacttgtgagactgttt 29363603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 389 - 445
Target Start/End: Original strand, 48157168 - 48157224
Alignment:
Q  389 atagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||| ||||| ||| ||||||||||||| |||||||||| || |||||||||||    
T  48157168 atagcttgtgaaaacaaattatagcttatattaaaacaatttcactttattttatct 48157224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 325 - 408
Target Start/End: Original strand, 29574585 - 29574668
Alignment:
Q  325 acttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatgaactttccaggatagcttatgaaagcaactt 408  Q
    |||||||||||||||| | | | ||| || ||| |||||||||||||||||| | || |||| |||||| ||||||| ||||||    
T  29574585 acttgtgagactgtttcggagaacttatggaaacagcttatgacatgtccataacctctccatgatagcatatgaaaacaactt 29574668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 386 - 445
Target Start/End: Complemental strand, 31338533 - 31338474
Alignment:
Q  386 aggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||| ||||| || ||||||||| ||||||| |||||| |||||| |||||||||||    
T  31338533 aggatagtttatggaaacaacttataacttatataaaaacagtttgactttattttatct 31338474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 324 - 375
Target Start/End: Complemental strand, 33933903 - 33933852
Alignment:
Q  324 tacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtcca 375  Q
    |||||||| |||||||||| ||| ||| || |||||||||||||||||||||    
T  33933903 tacttgtgcgactgtttggtaaaacttatggaaatagcttatgacatgtcca 33933852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 386 - 445
Target Start/End: Complemental strand, 38010739 - 38010680
Alignment:
Q  386 aggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||| |||||||| || |||||||||||||| ||||||||||| | || ||||||||    
T  38010739 aggatagattatgaaaacagcttatagcttatatgaaaacaatttggctttgttttatct 38010680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 483 - 513
Target Start/End: Complemental strand, 2221877 - 2221847
Alignment:
Q  483 ataagtgtttaattaagttgtttatccaaac 513  Q
    |||||||||||||||||||||||||||||||    
T  2221877 ataagtgtttaattaagttgtttatccaaac 2221847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 284 - 342
Target Start/End: Original strand, 4970711 - 4970768
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttgg 342  Q
    |||||||||| |||||||||| |||| ||  |||||||||| |||||||||||||||||    
T  4970711 tgtttggattgacttatttgagcttatctcgtgacataagt-cttgtgagactgtttgg 4970768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 391 - 445
Target Start/End: Original strand, 9527140 - 9527194
Alignment:
Q  391 agcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||||||| |||||||||| |||||| |||||| |||||| ||||| |||||    
T  9527140 agcttatgaaaacaacttatagtttatatgaaaacagtttgactttattatatct 9527194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 385 - 443
Target Start/End: Original strand, 17989067 - 17989125
Alignment:
Q  385 caggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttat 443  Q
    ||||| ||||||||||| ||| |||||| |||||| |||||| |||||| |||||||||    
T  17989067 caggagagcttatgaaaacaaattatagtttatatgaaaacagtttgactttattttat 17989125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 352 - 430
Target Start/End: Original strand, 18350718 - 18350796
Alignment:
Q  352 tgaaaatagcttatgacatgtccatgaactttccaggatagcttatgaaagcaacttatagcttatatcaaaacaattt 430  Q
    |||||||||||||  |||||| ||| | || |||| |||||||||||||| || |||||| ||||||  ||||||||||    
T  18350718 tgaaaatagcttaaaacatgttcataagctctccatgatagcttatgaaaacagcttataacttatacgaaaacaattt 18350796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 387 - 445
Target Start/End: Complemental strand, 22759210 - 22759152
Alignment:
Q  387 ggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||||||||||| || ||| |||||||||| ||||||||||  | |||||||||||    
T  22759210 ggatagcttatgaaatcagcttttagcttatatgaaaacaattttcctttattttatct 22759152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 407 - 445
Target Start/End: Complemental strand, 23918961 - 23918923
Alignment:
Q  407 ttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||||||||| ||||||||||||| |||||||||||    
T  23918961 ttatagcttatatgaaaacaatttgactttattttatct 23918923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 286 - 372
Target Start/End: Original strand, 28727684 - 28727770
Alignment:
Q  286 tttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgt 372  Q
    ||||||||||||||||||| |||| ||  |||| |||| ||||| |||||||||||  | ||||| || |||  |||||||||||||    
T  28727684 tttggattaacttatttgagcttatcttttgacctaagaacttgcgagactgtttgagagagcttatggaaacggcttatgacatgt 28727770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 284 - 378
Target Start/End: Complemental strand, 41040316 - 41040222
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatga 378  Q
    |||||| ||| | ||||||||  ||| ||||||| ||||||| ||||||| || ||| ||| ||||| || ||| |||||||||||| |||||||    
T  41040316 tgtttgaattgatttatttgagtttatctactgatataagtatttgtgaggctctttagaagagcttatggaaacagcttatgacatatccatga 41040222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 284 - 322
Target Start/End: Original strand, 46609007 - 46609045
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataa 322  Q
    ||||||||||| ||||||||| |||||||||||||||||    
T  46609007 tgtttggattagcttatttgaacttacctactgacataa 46609045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 383 - 445
Target Start/End: Complemental strand, 46825126 - 46825064
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||| |||||||||||||| |   |||| |||||||| ||||||||||||| |||||||||||    
T  46825126 tccaagatagcttatgaaaacggtttatggcttatatgaaaacaatttgactttattttatct 46825064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 388 - 441
Target Start/End: Original strand, 18516296 - 18516349
Alignment:
Q  388 gatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttatttt 441  Q
    |||||| |||| || ||||||||||||||||| || |||||||||| |||||||    
T  18516296 gatagcatatggaaacaacttatagcttatatgaacacaatttgactttatttt 18516349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 330 - 443
Target Start/End: Complemental strand, 25422431 - 25422318
Alignment:
Q  330 tgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatgaactttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatt 429  Q
    ||||||||||||| | ||||| || ||| | ||||||||||||  || |||| |||| |||||| | ||||| ||| |||||||| ||||  ||| ||||    
T  25422431 tgagactgtttgggagagcttatggaaacaccttatgacatgtttataaactctccatgatagcctgtgaaaacaatttatagctaatatggaaagaatt 25422332  T
Q  430 tgaccttattttat 443  Q
    | || |||||||||    
T  25422331 taactttattttat 25422318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 295 - 372
Target Start/End: Original strand, 25670516 - 25670593
Alignment:
Q  295 acttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgt 372  Q
    ||||| |||| |||| ||| |||||||||  ||||||||||||||||  ||| ||| |||||| | ||||||||||||    
T  25670516 acttacttgagcttatctattgacataagctcttgtgagactgtttgagaaaacttatgaaaacaacttatgacatgt 25670593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 389 - 434
Target Start/End: Complemental strand, 39518851 - 39518806
Alignment:
Q  389 atagcttatgaaagcaacttatagcttatatcaaaacaatttgacc 434  Q
    ||||||||||||| ||||||| |||||||||  |||||||||||||    
T  39518851 atagcttatgaaaacaacttaaagcttatatgcaaacaatttgacc 39518806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 383 - 440
Target Start/End: Complemental strand, 44821987 - 44821930
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattt 440  Q
    ||||| ||||||||||||| || |||||| ||||||  ||||||||||||| ||||||    
T  44821987 tccagaatagcttatgaaaacagcttataacttatacaaaaacaatttgactttattt 44821930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 486 - 515
Target Start/End: Original strand, 47046273 - 47046302
Alignment:
Q  486 agtgtttaattaagttgtttatccaaacag 515  Q
    ||||||||||||||||||||||||||||||    
T  47046273 agtgtttaattaagttgtttatccaaacag 47046302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 9e-17; HSPs: 48)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 387 - 444
Target Start/End: Complemental strand, 4006738 - 4006681
Alignment:
Q  387 ggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatc 444  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||    
T  4006738 ggatagcttatgaaaacaacttatagcttatataaaaacaatttgactttattttatc 4006681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 286 - 372
Target Start/End: Original strand, 26559160 - 26559246
Alignment:
Q  286 tttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgt 372  Q
    |||||||||||||||||||  |||||||||| |||||| | |||||||||||||||||| | ||| |||||| | ||||||| ||||    
T  26559160 tttggattaacttatttgagtttacctactggcataagcatttgtgagactgtttggaagaacttatgaaaacaacttatgatatgt 26559246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 284 - 341
Target Start/End: Complemental strand, 27894184 - 27894127
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttg 341  Q
    ||||||||||| || |||||| ||||||||| ||||||||||||||||||||||||||    
T  27894184 tgtttggattagctcatttgagcttacctacggacataagtacttgtgagactgtttg 27894127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 386 - 432
Target Start/End: Original strand, 2727901 - 2727947
Alignment:
Q  386 aggatagcttatgaaagcaacttatagcttatatcaaaacaatttga 432  Q
    |||||||||||||||| |||||||||||||||||||| |||||||||    
T  2727901 aggatagcttatgaaaacaacttatagcttatatcaatacaatttga 2727947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 445
Target Start/End: Original strand, 32386605 - 32386667
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||||| || |||||| |||| |||| ||||||| |||||||||||||||||||||||||    
T  32386605 tccaggataactaatgaaaacaacgtataccttatatgaaaacaatttgaccttattttatct 32386667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 372 - 445
Target Start/End: Original strand, 281879 - 281952
Alignment:
Q  372 tccatgaactttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||| || || |||||||||||||||  || |||||||||||||| ||||||| ||||| |||||||||||    
T  281879 tccatgagctctctaggatagcttatgaacacagcttatagcttatatgaaaacaagttgactttattttatct 281952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 284 - 373
Target Start/End: Original strand, 2460070 - 2460159
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtc 373  Q
    ||||||||||||||||||||| ||||   |||  ||||||||||||||||||||||||  | ||||| || ||| | |||||||||||||    
T  2460070 tgtttggattaacttatttgagcttataaactagcataagtacttgtgagactgtttgagagagcttatggaaacaacttatgacatgtc 2460159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 311 - 376
Target Start/End: Original strand, 2732193 - 2732258
Alignment:
Q  311 ctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccat 376  Q
    ||||||||||||| |||||||||||||||||||||||||| || ||| |||| ||||  |||||||    
T  2732193 ctactgacataagcacttgtgagactgtttggaaaagcttatggaaacagctaatgatctgtccat 2732258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 284 - 416
Target Start/End: Complemental strand, 3525275 - 3525143
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatgaacttt 383  Q
    |||||||||| ||| |||| |  ||| ||| |||||||||||||  || ||||||| |||| || || || |||||| ||||||||||||||| | || |    
T  3525275 tgtttggattgactaatttaagtttatctagtgacataagtactcttgtgactgttcggaagagtttatggaaatagtttatgacatgtccataagctct 3525176  T
Q  384 ccaggatagcttatgaaagcaacttatagctta 416  Q
    | |||||||| ||| ||| || |||||||||||    
T  3525175 ctaggatagcatataaaaacagcttatagctta 3525143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 297 - 401
Target Start/End: Complemental strand, 27857496 - 27857392
Alignment:
Q  297 ttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatgaactttccaggatagctta 396  Q
    ||||||||  ||| |||||||||||   |||||||| ||||||||| | ||||| |||||| | |||||||||| ||||| | || |||| |||||||||    
T  27857496 ttatttgagtttatctactgacatagacacttgtgaaactgtttgggagagcttatgaaaacaacttatgacatctccataagctctccatgatagctta 27857397  T
Q  397 tgaaa 401  Q
    |||||    
T  27857396 tgaaa 27857392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 312 - 376
Target Start/End: Complemental strand, 32976101 - 32976037
Alignment:
Q  312 tactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccat 376  Q
    ||||| ||||||||||||||||||||||||||| ||||| |  ||| |||||||||||| |||||    
T  32976101 tactggcataagtacttgtgagactgtttggaagagcttatagaaacagcttatgacatttccat 32976037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 386 - 445
Target Start/End: Complemental strand, 14492327 - 14492268
Alignment:
Q  386 aggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||| ||||||||| || |||||||||| ||||||||||||||||| | |||||||||    
T  14492327 aggataacttatgaaaacagcttatagcttgtatcaaaacaatttgacttcattttatct 14492268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 381 - 444
Target Start/End: Complemental strand, 22742396 - 22742333
Alignment:
Q  381 tttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatc 444  Q
    ||||||||||| ||||| |||  | |||||||||||||| ||||||||||||| ||||||||||    
T  22742396 tttccaggataacttataaaaatagcttatagcttatatgaaaacaatttgactttattttatc 22742333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 295 - 424
Target Start/End: Complemental strand, 32917337 - 32917205
Alignment:
Q  295 acttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatgaac---tttccaggata 391  Q
    ||||||| || ||||||||||   ||||  |||||||||||||||||| | ||||| || ||| | |||||||||||||||| | |   |||  ||||||    
T  32917337 acttattagagcttacctactagaataaacacttgtgagactgtttgggagagcttatggaaacaacttatgacatgtccataagcttttttttaggata 32917238  T
Q  392 gcttatgaaagcaacttatagcttatatcaaaa 424  Q
    ||  |||||| ||||||||||||||||| ||||    
T  32917237 gcagatgaaaacaacttatagcttatatgaaaa 32917205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 320 - 445
Target Start/End: Complemental strand, 4249049 - 4248924
Alignment:
Q  320 taagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatgaactttccaggatagcttatgaaagcaacttatagcttatat 419  Q
    |||| |||||||| | ||||| ||| ||||| |||||| | |||||| ||||||||| | || |||  ||||||||| |||| || ||||| | |||||     
T  4249049 taagcacttgtgaaattgttttgaagagcttatgaaaacaccttatggcatgtccataagctctccgagatagcttaggaaaacaccttattgtttatac 4248950  T
Q  420 caaaacaatttgaccttattttatct 445  Q
     ||| ||||||||| |||||||||||    
T  4248949 aaaatcaatttgactttattttatct 4248924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 283 - 375
Target Start/End: Original strand, 8420114 - 8420207
Alignment:
Q  283 atgtttggattaactt-atttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtcca 375  Q
    ||||||||||| |||| |||||| |||| ||| ||||||||  ||||||||||||||| |  | ||||| |  |||||||||||||||||||||    
T  8420114 atgtttggattgactttatttgagcttatctattgacataaacacttgtgagactgttagtgagagcttatagaaatagcttatgacatgtcca 8420207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 353 - 418
Target Start/End: Original strand, 9041448 - 9041513
Alignment:
Q  353 gaaaatagcttatgacatgtccatgaactttccaggatagcttatgaaagcaacttatagcttata 418  Q
    |||||||||||||||||||||||| | || |||| ||||||| || ||| || |||||||||||||    
T  9041448 gaaaatagcttatgacatgtccataagctctccacgatagctaataaaaacagcttatagcttata 9041513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 297 - 374
Target Start/End: Complemental strand, 31461810 - 31461733
Alignment:
Q  297 ttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtcc 374  Q
    |||||||| |||| ||| |  |||||||||||||||||||||| | || |||||  ||||||||||||||||| ||||    
T  31461810 ttatttgagcttatctatttgcataagtacttgtgagactgttcgcaagagcttacgaaaatagcttatgacaagtcc 31461733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 382 - 443
Target Start/End: Complemental strand, 32976007 - 32975946
Alignment:
Q  382 ttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttat 443  Q
    |||||||||||||||||||| |||||||| |||| |||  ||||| |||||| |||||||||    
T  32976007 ttccaggatagcttatgaaaacaacttattgcttctattgaaacagtttgactttattttat 32975946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 299 - 376
Target Start/End: Complemental strand, 33385665 - 33385588
Alignment:
Q  299 atttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccat 376  Q
    |||||| |||| ||||||| ||||| |||||||| ||||||||||| || || || ||| |||| |||||||||||||    
T  33385665 atttgaacttatctactgatataagcacttgtgaaactgtttggaagagtttatggaaacagctcatgacatgtccat 33385588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 284 - 340
Target Start/End: Complemental strand, 2795412 - 2795356
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgttt 340  Q
    ||||| ||||||| ||||||  |||| |||||||||||| |||||||||||||||||    
T  2795412 tgttttgattaacctatttgtacttatctactgacataaatacttgtgagactgttt 2795356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 311 - 375
Target Start/End: Original strand, 11600820 - 11600884
Alignment:
Q  311 ctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtcca 375  Q
    ||||||||||||  ||||||||| |||||| | | || ||||||||| |||||||||||||||||    
T  11600820 ctactgacataaacacttgtgaggctgttttgtagagtttttgaaaacagcttatgacatgtcca 11600884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 393 - 445
Target Start/End: Original strand, 29274281 - 29274333
Alignment:
Q  393 cttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||||| ||  ||||||||||||| ||||||||||||| |||||||||||    
T  29274281 cttatgaaaacagtttatagcttatatgaaaacaatttgactttattttatct 29274333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 319 - 374
Target Start/End: Complemental strand, 5731685 - 5731630
Alignment:
Q  319 ataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtcc 374  Q
    ||||| |||||||||| ||||||| | ||||| |||||||||||||||| ||||||    
T  5731685 ataagcacttgtgagagtgtttggtagagcttatgaaaatagcttatgatatgtcc 5731630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 321 - 364
Target Start/End: Complemental strand, 20351262 - 20351219
Alignment:
Q  321 aagtacttgtgagactgtttggaaaagcttttgaaaatagctta 364  Q
    |||||||||||||||||||||| | ||||| |||||||||||||    
T  20351262 aagtacttgtgagactgtttgggacagcttatgaaaatagctta 20351219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 283 - 370
Target Start/End: Original strand, 20861616 - 20861703
Alignment:
Q  283 atgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacat 370  Q
    |||||||||||  ||||||||| ||||||||||| ||||||||  || |||||| ||||| | ||||| |||||| | ||||| ||||    
T  20861616 atgtttggattgtcttatttgagcttacctactggcataagtatatgcgagactttttgggagagcttatgaaaacatcttattacat 20861703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 383 - 446
Target Start/End: Complemental strand, 25426198 - 25426135
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatcta 446  Q
    ||||||||||||||| |||  | ||||||||||| || ||| ||||||||| ||||||||||||    
T  25426198 tccaggatagcttataaaaatagcttatagcttacatgaaagcaatttgactttattttatcta 25426135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 284 - 375
Target Start/End: Original strand, 32171302 - 32171393
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtcca 375  Q
    ||||||||||  ||||||| | ||||  || ||||||||| ||||| |||||||||||  | ||||| |||||| ||||||||||| |||||    
T  32171302 tgtttggattgtcttatttcagcttaagtattgacataagcacttgcgagactgtttgagagagcttatgaaaacagcttatgacaagtcca 32171393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 283 - 350
Target Start/End: Complemental strand, 33788116 - 33788049
Alignment:
Q  283 atgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagctt 350  Q
    ||||||||||| |||||||| | |||||||||||||| ||||| |||| ||||| ||||  |||||||    
T  33788116 atgtttggattgacttatttaaacttacctactgacaaaagtatttgttagactatttgtgaaagctt 33788049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 381 - 440
Target Start/End: Complemental strand, 33828676 - 33828617
Alignment:
Q  381 tttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattt 440  Q
    |||||| |||||||||| ||| ||||||||| ||||||  ||||||||||||| ||||||    
T  33828676 tttccatgatagcttattaaaacaacttataacttatacgaaaacaatttgactttattt 33828617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 284 - 342
Target Start/End: Original strand, 281767 - 281825
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttgg 342  Q
    |||||||||| ||||| ||||  |||  || ||||||||||||||||||||||||||||    
T  281767 tgtttggattgacttacttgagattatgtagtgacataagtacttgtgagactgtttgg 281825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 383 - 445
Target Start/End: Complemental strand, 1403024 - 1402962
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||| |||||||||||||| ||| ||||||||||||| |||| | ||| || |||||||||||    
T  1403024 tccatgatagcttatgaaaacaatttatagcttatatgaaaatagtttaactttattttatct 1402962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 383 - 473
Target Start/End: Complemental strand, 2514730 - 2514640
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatctactattagaaaaatggcttatgcataag 473  Q
    ||||||| |||||||||||  ||||||||||| |||| |||  | |||||| |||||||||||  ||||| | |||| |||||| ||||||    
T  2514730 tccaggacagcttatgaaaataacttatagctcatataaaattagtttgactttattttatcttttattatagaaatagcttatacataag 2514640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 395 - 445
Target Start/End: Complemental strand, 5550148 - 5550098
Alignment:
Q  395 tatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||| || |||||||||||||| ||||||||||||| |||| ||||||    
T  5550148 tatgaaaacagcttatagcttatatgaaaacaatttgactttatgttatct 5550098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 388 - 442
Target Start/End: Complemental strand, 5623179 - 5623125
Alignment:
Q  388 gatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttatttta 442  Q
    |||||||||||||| |||||||||| |||||| ||||| ||||| | ||||||||    
T  5623179 gatagcttatgaaaacaacttatagtttatatgaaaactatttggctttatttta 5623125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 391 - 445
Target Start/End: Original strand, 9093606 - 9093660
Alignment:
Q  391 agcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||||||| || |||||||||||||  |||||||||| || |||||||||||    
T  9093606 agcttatgaaaacagcttatagcttatacgaaaacaatttaactttattttatct 9093660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 386 - 444
Target Start/End: Complemental strand, 30523684 - 30523627
Alignment:
Q  386 aggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatc 444  Q
    ||||||||||||||||  |||||||||||||||| || || ||||||| ||||||||||    
T  30523684 aggatagcttatgaaaa-aacttatagcttatatgaagacgatttgacattattttatc 30523627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 283 - 324
Target Start/End: Complemental strand, 6536764 - 6536723
Alignment:
Q  283 atgtttggattaacttatttgatcttacctactgacataagt 324  Q
    ||||||||||||| ||||||||  ||||||||||||||||||    
T  6536764 atgtttggattaaattatttgagtttacctactgacataagt 6536723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 391 - 440
Target Start/End: Original strand, 7485118 - 7485167
Alignment:
Q  391 agcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattt 440  Q
    ||||||||||| ||||||||||||||||| |||| ||||| || ||||||    
T  7485118 agcttatgaaaacaacttatagcttatatgaaaaaaatttaactttattt 7485167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 283 - 356
Target Start/End: Original strand, 7901749 - 7901822
Alignment:
Q  283 atgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaa 356  Q
    ||||||||||||||||||||||  |||  || |  ||||||  ||||||||||||||||||| ||||| |||||    
T  7901749 atgtttggattaacttatttgagtttatatagtatcataagcccttgtgagactgtttggaagagcttatgaaa 7901822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 311 - 368
Target Start/End: Original strand, 10353707 - 10353764
Alignment:
Q  311 ctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgac 368  Q
    ||||| ||||||| |||||||||||||||||| | ||||| |||||| || |||||||    
T  10353707 ctactaacataagcacttgtgagactgtttgggagagcttgtgaaaacagtttatgac 10353764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 384 - 441
Target Start/End: Complemental strand, 10400296 - 10400239
Alignment:
Q  384 ccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttatttt 441  Q
    |||||||| ||||||||  || |||||||||||||| | ||||||||||| |||||||    
T  10400296 ccaggatatcttatgaagacatcttatagcttatatgataacaatttgactttatttt 10400239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 388 - 445
Target Start/End: Original strand, 20671912 - 20671969
Alignment:
Q  388 gatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||| |||||||| ||| ||| ||||||||  ||||||||||||| |||||||||||    
T  20671912 gatagtttatgaaaacaatttaaagcttatacgaaaacaatttgactttattttatct 20671969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 388 - 433
Target Start/End: Complemental strand, 25100066 - 25100021
Alignment:
Q  388 gatagcttatgaaagcaacttatagcttatatcaaaacaatttgac 433  Q
    |||||||||||||| ||||||||| ||| ||| |||||||||||||    
T  25100066 gatagcttatgaaaacaacttataacttctatgaaaacaatttgac 25100021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 372 - 445
Target Start/End: Original strand, 28088253 - 28088326
Alignment:
Q  372 tccatgaactttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||| || |||| |||||||||||||| ||  ||||||||||||| |||||||| ||   |||||||||||    
T  28088253 tccatgagctctccatgatagcttatgaaaacagtttatagcttatatgaaaacaatctgcatttattttatct 28088326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 283 - 340
Target Start/End: Complemental strand, 29249545 - 29249488
Alignment:
Q  283 atgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgttt 340  Q
    ||||||||||| |||||||||| ||||  |||||  |||||||||||| |||||||||    
T  29249545 atgtttggattgacttatttgagcttatttactgttataagtacttgtaagactgttt 29249488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 30536884 - 30536941
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttg 341  Q
    |||||||||| ||||||||||  ||| ||||| |||||||||||| | ||||||||||    
T  30536884 tgtttggattgacttatttgagtttatctacttacataagtacttattagactgtttg 30536941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 283 - 336
Target Start/End: Complemental strand, 33089658 - 33089605
Alignment:
Q  283 atgtttggattaacttatttgatcttacctactgacataagtacttgtgagact 336  Q
    |||||||| || |||||||||| |||| ||||||||||| ||| ||||||||||    
T  33089658 atgtttgggttgacttatttgagcttatctactgacatatgtatttgtgagact 33089605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 9e-17; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 284 - 445
Target Start/End: Original strand, 40303998 - 40304158
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatgaacttt 383  Q
    ||||||||||||||||||| |  ||| |||||| |||||| |  | ||||| ||||||| | | |||  ||| ||||||||||||||| |||| |||| |    
T  40303998 tgtttggattaacttatttcagattatctactggcataagcatgtctgagattgtttgggataacttacgaatatagcttatgacatgcccataaactat 40304097  T
Q  384 ccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    | ||||||| |||||||| || |||||| ||||||| |||||||| |||  |||||||||||    
T  40304098 ctaggatag-ttatgaaaacagcttataacttatatgaaaacaatgtgattttattttatct 40304158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 383 - 442
Target Start/End: Original strand, 7218116 - 7218175
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttatttta 442  Q
    |||||||||| |||||||| ||||||||||||||||| ||||||||||||| ||||||||    
T  7218116 tccaggataggttatgaaaacaacttatagcttatatgaaaacaatttgactttatttta 7218175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 383 - 442
Target Start/End: Original strand, 25006076 - 25006135
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttatttta 442  Q
    |||| |||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||    
T  25006076 tccaagatagcttatgaaaacaacttatagcttatatgaaaacaatttgactttatttta 25006135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 383 - 441
Target Start/End: Complemental strand, 17269278 - 17269220
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttatttt 441  Q
    ||||||||||||||||||| |||||||| |||||||| ||||||||||||| |||||||    
T  17269278 tccaggatagcttatgaaaacaacttattgcttatatgaaaacaatttgactttatttt 17269220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 389 - 445
Target Start/End: Original strand, 27738228 - 27738284
Alignment:
Q  389 atagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||||||||| ||| ||||||||||||| ||||||||||||| |||||||||||    
T  27738228 atagcttatgaaaacaaattatagcttatatgaaaacaatttgactttattttatct 27738284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 386 - 445
Target Start/End: Complemental strand, 25479606 - 25479547
Alignment:
Q  386 aggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||||||||||||| ||||||||||| ||||| || |||||||||| |||||||||||    
T  25479606 aggatagcttatgaaaacaacttatagcctatatgaagacaatttgacgttattttatct 25479547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 295 - 417
Target Start/End: Complemental strand, 16980943 - 16980821
Alignment:
Q  295 acttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatgaactttccaggatagct 394  Q
    |||||||||| ||||  |||  |||||||||||||||||||| ||||  | ||||| || ||| | |||| ||||| | ||| |||||||||| ||||||    
T  16980943 acttatttgaacttatataccaacataagtacttgtgagactatttgagagagcttatggaaacaacttacgacattttcataaactttccagaatagct 16980844  T
Q  395 tatgaaagcaacttatagcttat 417  Q
     |||||| || ||||||||||||    
T  16980843 aatgaaaacagcttatagcttat 16980821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 383 - 433
Target Start/End: Original strand, 25005839 - 25005889
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgac 433  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||| |||||    
T  25005839 tccaggatagcttatgaaaacaacttatagcttatatgaaaacaagttgac 25005889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 327 - 445
Target Start/End: Original strand, 47002861 - 47002978
Alignment:
Q  327 ttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatgaactttccaggatagcttatgaaagcaacttatagcttatatcaaaaca 426  Q
    |||||| | |||||||||| | || |||||| | |||||||||||||||| |||| | || |||||||||||||| ||| || || ||| ||| ||||||    
T  47002861 ttgtgaaattgtttggaaagg-ttatgaaaacaacttatgacatgtccataaactctacatgatagcttatgaaaacaatttctaacttgtataaaaaca 47002959  T
Q  427 atttgaccttattttatct 445  Q
    |||| || |||||||||||    
T  47002960 atttaactttattttatct 47002978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 287 - 372
Target Start/End: Original strand, 10199330 - 10199415
Alignment:
Q  287 ttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgt 372  Q
    ||||||| |||||||||| |||| ||||| ||||||| |||||||| ||| ||||| | | ||  |||||||||||||||||||||    
T  10199330 ttggattgacttatttgagcttatctactaacataagcacttgtgacactatttgggagaactcatgaaaatagcttatgacatgt 10199415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 284 - 341
Target Start/End: Original strand, 24460320 - 24460377
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttg 341  Q
    |||||||||| |||||||||| |||| |||||||||| || |||||||||||||||||    
T  24460320 tgtttggattgacttatttgaacttatctactgacatgagcacttgtgagactgtttg 24460377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 284 - 373
Target Start/End: Original strand, 32515360 - 32515449
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtc 373  Q
    ||||||||||| | |||||||  ||| ||||| ||||||| |||||||||||||||||| | ||||| || ||| ||| |||||||||||    
T  32515360 tgtttggattagcatatttgagtttatctactaacataagcacttgtgagactgtttgggagagcttatggaaacagcgtatgacatgtc 32515449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 372 - 445
Target Start/End: Original strand, 34179903 - 34179976
Alignment:
Q  372 tccatgaactttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||| |||||| |||||||| |||||||| ||  |||||||||| || ||||||||||||| |||||||||||    
T  34179903 tccataaacttttcaggatagtttatgaaaacagtttatagcttagattaaaacaatttgactttattttatct 34179976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 284 - 376
Target Start/End: Complemental strand, 48282273 - 48282183
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccat 376  Q
    ||||||| || ||| |||||| ||||||||||| ||||||||| ||||||||  ||||  | ||||| ||||||||| |||||||||||||||    
T  48282273 tgtttgggttgactaatttgagcttacctactggcataagtacctgtgagac--tttgagagagcttatgaaaataggttatgacatgtccat 48282183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 284 - 372
Target Start/End: Complemental strand, 6292643 - 6292556
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgt 372  Q
    |||||||||| |||||||||| |||| ||||||||||||| |||| ||||| ||||||| | |  |||| |||| ||||||||||||||    
T  6292643 tgtttggattgacttatttgagcttatctactgacataagcacttttgagattgtttgggaga-atttttaaaacagcttatgacatgt 6292556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 393 - 445
Target Start/End: Complemental strand, 30371166 - 30371114
Alignment:
Q  393 cttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||||| ||||||||||||||||| ||||||||||||  |||||||||||    
T  30371166 cttatgaaaacaacttatagcttatatgaaaacaatttgagtttattttatct 30371114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 284 - 376
Target Start/End: Complemental strand, 34536309 - 34536217
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccat 376  Q
    |||||||| | |||||||||| | || ||| ||||||||  |||||||||||||||||  |  |||| |||||| ||||||||||||||||||    
T  34536309 tgtttggaatgacttatttgaacgtatctattgacataaacacttgtgagactgtttgagatggcttatgaaaacagcttatgacatgtccat 34536217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 390 - 445
Target Start/End: Original strand, 5592734 - 5592789
Alignment:
Q  390 tagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||||||||| ||||||||||||||||| | ||||||| ||| |||||||||||    
T  5592734 tagcttatgaaaacaacttatagcttatatgacaacaattcgactttattttatct 5592789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 286 - 373
Target Start/End: Complemental strand, 15581403 - 15581316
Alignment:
Q  286 tttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtc 373  Q
    |||||| || ||||||| | |||| ||||||||||||| |||||||||| ||||||||| ||||  || ||| | |||||||||||||    
T  15581403 tttggaatagcttattttagcttatctactgacataagcacttgtgagattgtttggaagagctaatggaaacaacttatgacatgtc 15581316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 390 - 445
Target Start/End: Original strand, 28467356 - 28467411
Alignment:
Q  390 tagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||||||||| |||||| |||||||||| |||| |||||||| |||||||||||    
T  28467356 tagcttatgaaaacaacttgtagcttatatgaaaataatttgactttattttatct 28467411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 386 - 445
Target Start/End: Original strand, 33186002 - 33186061
Alignment:
Q  386 aggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||||||||| ||| ||||||||| ||| ||| ||||||||| |||||||||||||||    
T  33186002 aggatagcttataaaaacaacttataacttgtataaaaacaattcgaccttattttatct 33186061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 390 - 445
Target Start/End: Complemental strand, 49517091 - 49517036
Alignment:
Q  390 tagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||||||||| || ||||||||||| || ||||||||||||| |||||||||||    
T  49517091 tagcttatgaaaacagcttatagcttaaatgaaaacaatttgactttattttatct 49517036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 297 - 376
Target Start/End: Original strand, 49691985 - 49692063
Alignment:
Q  297 ttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccat 376  Q
    |||||||| |||| ||| || |||||| |||||||||||||||||  | | ||| |||||||||||||||||||||||||    
T  49691985 ttatttgaacttatctaatg-cataagaacttgtgagactgtttgagagaacttatgaaaatagcttatgacatgtccat 49692063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 359 - 401
Target Start/End: Original strand, 26293146 - 26293188
Alignment:
Q  359 agcttatgacatgtccatgaactttccaggatagcttatgaaa 401  Q
    ||||||||| |||||||| ||||||||||||||||||||||||    
T  26293146 agcttatgagatgtccataaactttccaggatagcttatgaaa 26293188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 383 - 445
Target Start/End: Complemental strand, 30257711 - 30257649
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||||||| |||||||| ||||||| |||||||||  ||||| |||||| |||||||||||    
T  30257711 tccaggatagtttatgaaaacaacttaaagcttatatggaaacagtttgactttattttatct 30257649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 284 - 378
Target Start/End: Original strand, 33723301 - 33723395
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatga 378  Q
    |||||||||| |||||||||| |||| |||||  |||||  ||||||||||||| |||| ||| ||| || ||| |||| ||||||||| |||||    
T  33723301 tgtttggattgacttatttgaacttatctactaccataaacacttgtgagactgcttgggaaaacttatggaaacagctcatgacatgttcatga 33723395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 388 - 445
Target Start/End: Original strand, 5421967 - 5422024
Alignment:
Q  388 gatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||||||| ||| ||||||||||||||||  |||||||||||||  ||||||||||    
T  5421967 gatagcttatcaaaacaacttatagcttataagaaaacaatttgactatattttatct 5422024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 381 - 438
Target Start/End: Complemental strand, 8130466 - 8130409
Alignment:
Q  381 tttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttat 438  Q
    |||||| |||||||||||||| ||||||||||||||| | |||||| |||||| ||||    
T  8130466 tttccatgatagcttatgaaaacaacttatagcttatgtgaaaacagtttgactttat 8130409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 319 - 376
Target Start/End: Original strand, 14737680 - 14737737
Alignment:
Q  319 ataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccat 376  Q
    ||||| |||||||||||||||||| ||| ||| |||||||| ||||| ||||||||||    
T  14737680 ataagcacttgtgagactgtttgggaaaacttgtgaaaataacttataacatgtccat 14737737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 313 - 370
Target Start/End: Complemental strand, 27976725 - 27976670
Alignment:
Q  313 actgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacat 370  Q
    ||||||||||||  |||| ||||||||||||||| |||||||||||||||||||||||    
T  27976725 actgacataagtt-ttgttagactgtttggaaaa-cttttgaaaatagcttatgacat 27976670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 285 - 374
Target Start/End: Original strand, 44115825 - 44115914
Alignment:
Q  285 gtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtcc 374  Q
    ||||||||| ||||||||||  ||||||||| || |||||||||||||||| |||||  | ||||| | ||||  ||| |||||||||||    
T  44115825 gtttggattgacttatttgagtttacctactcacttaagtacttgtgagacagtttgagagagcttgtaaaaacggctaatgacatgtcc 44115914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 372 - 445
Target Start/End: Complemental strand, 45205107 - 45205034
Alignment:
Q  372 tccatgaactttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||||||| | || |||||||||||||| |||||| ||||||||||  ||| | |||||| |||||||||||    
T  45205107 tccatgaactctacatgatagcttatgaaaacaacttctagcttatatggaaatagtttgactttattttatct 45205034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 284 - 376
Target Start/End: Original strand, 3597200 - 3597292
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccat 376  Q
    |||||||||| ||||||||||  ||| ||| ||| ||||  |||||||||||||||||||| || |  | |||||| ||||||||||| ||||    
T  3597200 tgtttggattgacttatttgaggttatctaatgatataaccacttgtgagactgtttggaagagttgataaaaataacttatgacatggccat 3597292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 383 - 443
Target Start/End: Complemental strand, 9656678 - 9656618
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttat 443  Q
    ||||||||||||||||||  || |||||||||||||| |||| ||||| || |||||||||    
T  9656678 tccaggatagcttatgaacacagcttatagcttatatgaaaataatttaactttattttat 9656618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 388 - 436
Target Start/End: Original strand, 12564921 - 12564969
Alignment:
Q  388 gatagcttatgaaagcaacttatagcttatatcaaaacaatttgacctt 436  Q
    |||||||||||||| ||||||||||||||||| |||||| |||| ||||    
T  12564921 gatagcttatgaaaacaacttatagcttatatgaaaacagtttggcctt 12564969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 284 - 344
Target Start/End: Complemental strand, 21002306 - 21002246
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaa 344  Q
    ||||||||||  ||||||||| |||| |||||  |||||| ||||||||||||||||||||    
T  21002306 tgtttggattggcttatttgagcttatctacttgcataagaacttgtgagactgtttggaa 21002246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 383 - 431
Target Start/End: Original strand, 29045954 - 29046002
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttg 431  Q
    ||||||| ||||||||||| ||||||||||||||||| | |||||||||    
T  29045954 tccaggacagcttatgaaaacaacttatagcttatatgagaacaatttg 29046002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 352 - 444
Target Start/End: Complemental strand, 37842057 - 37841965
Alignment:
Q  352 tgaaaatagcttatgacatgtccatgaactttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatc 444  Q
    ||||||||||||||||  ||| ||| | || |||| |||||||||||  | |||| |||||||||||  |||||||||| || ||||||||||    
T  37842057 tgaaaatagcttatgaagtgttcataagctgtccatgatagcttatgcgaacaacatatagcttatacgaaaacaatttaactttattttatc 37841965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 387 - 442
Target Start/End: Original strand, 4034061 - 4034116
Alignment:
Q  387 ggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttatttta 442  Q
    |||||||||||||||| |||||||||||||| | | |||| |||||| ||||||||    
T  4034061 ggatagcttatgaaagtaacttatagcttatgtgataacattttgactttatttta 4034116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 283 - 350
Target Start/End: Original strand, 4276568 - 4276635
Alignment:
Q  283 atgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagctt 350  Q
    ||||||||||| |||||||||| |||| || ||| |||||| | |||| ||||| |||||||||||||    
T  4276568 atgtttggatttacttatttgagcttatcttctggcataagcatttgttagactatttggaaaagctt 4276635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 389 - 444
Target Start/End: Original strand, 10581125 - 10581180
Alignment:
Q  389 atagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatc 444  Q
    ||||||||||||| |||||||||||||| || |||| | |||||| ||||||||||    
T  10581125 atagcttatgaaaacaacttatagcttaaatgaaaaaagtttgactttattttatc 10581180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 284 - 375
Target Start/End: Original strand, 23373232 - 23373323
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtcca 375  Q
    |||||| ||| |||||||||| |||  ||||||| ||||| |||||||||| ||||||| | ||||| |  ||| | |||||||||||||||    
T  23373232 tgtttgaattgacttatttgaacttgtctactgatataagcacttgtgagattgtttgggagagcttatagaaacaacttatgacatgtcca 23373323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 389 - 444
Target Start/End: Complemental strand, 31624045 - 31623990
Alignment:
Q  389 atagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatc 444  Q
    ||||||||||| | ||||||||||| |||||||| |||||||||| ||| ||||||    
T  31624045 atagcttatgataacaacttatagcatatatcaatacaatttgactttaatttatc 31623990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 483 - 514
Target Start/End: Original strand, 35666982 - 35667013
Alignment:
Q  483 ataagtgtttaattaagttgtttatccaaaca 514  Q
    ||||||||||||||||||||||||||||||||    
T  35666982 ataagtgtttaattaagttgtttatccaaaca 35667013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 325 - 376
Target Start/End: Complemental strand, 44422809 - 44422758
Alignment:
Q  325 acttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccat 376  Q
    |||| ||||||||| ||| | ||||| |||||||||||||||||||||||||    
T  44422809 acttttgagactgtctgggagagcttatgaaaatagcttatgacatgtccat 44422758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 385 - 443
Target Start/End: Original strand, 2487841 - 2487899
Alignment:
Q  385 caggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttat 443  Q
    |||||||| ||||||||  ||||||||||||||||| ||| |||||||| ||| |||||    
T  2487841 caggatagtttatgaaaataacttatagcttatatccaaataatttgactttactttat 2487899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 383 - 445
Target Start/End: Complemental strand, 4200257 - 4200195
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||||| |||| |||| |||  |||||||||||| ||||||| ||||| |||||||||||    
T  4200257 tccaggatatcttacgaaaacaatatatagcttatatgaaaacaacttgactttattttatct 4200195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 279 - 369
Target Start/End: Original strand, 12564413 - 12564503
Alignment:
Q  279 aagtatgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgaca 369  Q
    |||| |||||| ||| |||||||||| ||||  |||||| ||||| ||||||| |||||||||| | |||||  | | |||||||||||||    
T  12564413 aagtctgtttgaattgacttatttgagcttatatactgatataagcacttgtgtgactgtttgggagagcttacgtatatagcttatgaca 12564503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 403 - 445
Target Start/End: Complemental strand, 15360902 - 15360860
Alignment:
Q  403 caacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||||||||||||||| |||||| |||||| |||||||||||    
T  15360902 caacttatagcttatatgaaaacagtttgactttattttatct 15360860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 284 - 378
Target Start/End: Complemental strand, 17269401 - 17269307
Alignment:
Q  284 tgtttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccatga 378  Q
    |||||||||| |||||||||| |||| || || |  |||  |||||||||| ||||||| |  |||| |||||||| |||||||||||| |||||    
T  17269401 tgtttggattgacttatttgaacttatcttcttatttaaacacttgtgagattgtttggtagtgcttatgaaaataccttatgacatgttcatga 17269307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 483 - 517
Target Start/End: Complemental strand, 32555735 - 32555701
Alignment:
Q  483 ataagtgtttaattaagttgtttatccaaacagcg 517  Q
    ||||||| |||||||||||||||||||||||||||    
T  32555735 ataagtgcttaattaagttgtttatccaaacagcg 32555701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 296 - 369
Target Start/End: Complemental strand, 2295235 - 2295163
Alignment:
Q  296 cttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgaca 369  Q
    ||||||||| |||| |||||| |||||||  |||||||||||||||| | | ||| |||||| |||||||||||    
T  2295235 cttatttgagcttatctactggcataagtt-ttgtgagactgtttgggagaacttatgaaaacagcttatgaca 2295163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 411 - 476
Target Start/End: Original strand, 2773674 - 2773739
Alignment:
Q  411 agcttatatcaaaacaatttgaccttattttatctactattagaaaaatggcttatgcataagtac 476  Q
    ||||||||| ||||||||||||  ||||||||||| || |||   |||| ||||||||||||||||    
T  2773674 agcttatattaaaacaatttgaaattattttatcttctgttatggaaatagcttatgcataagtac 2773739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 372 - 445
Target Start/End: Complemental strand, 15361752 - 15361679
Alignment:
Q  372 tccatgaactttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||| |||| || || ||| ||||||||| || |||||||||||||| |||| |||||||| ||| |||||||    
T  15361752 tccataaactctcaagaatatcttatgaaaacagcttatagcttatatgaaaataatttgactttactttatct 15361679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 383 - 444
Target Start/End: Original strand, 17422980 - 17423041
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatc 444  Q
    |||| |||||| ||||||| ||||||||||||||||| ||| ||  ||||| ||||||||||    
T  17422980 tccatgatagcatatgaaaacaacttatagcttatatgaaatcagcttgactttattttatc 17423041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 294 - 339
Target Start/End: Complemental strand, 17628736 - 17628691
Alignment:
Q  294 aacttatttgatcttacctactgacataagtacttgtgagactgtt 339  Q
    |||||||| || |||||||||||||| ||| |||||||||||||||    
T  17628736 aacttattggagcttacctactgacacaagcacttgtgagactgtt 17628691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 286 - 371
Target Start/End: Original strand, 18327067 - 18327152
Alignment:
Q  286 tttggattaacttatttgatcttacctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatg 371  Q
    ||||||||  ||||||||| |||| |||||| |||||| |||| ||| ||| ||||||| | ||| |||||| | |||||||||||    
T  18327067 tttggattggcttatttgagcttatctactgtcataagcacttttgacactatttggaagaacttatgaaaacaacttatgacatg 18327152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 408 - 473
Target Start/End: Original strand, 34619445 - 34619510
Alignment:
Q  408 tatagcttatatcaaaacaatttgaccttattttatctactattagaaaaatggcttatgcataag 473  Q
    |||||||||||  |||||||||| ||||||||||||||  | ||| | ||||||||||| ||||||    
T  34619445 tatagcttatacaaaaacaatttaaccttattttatcttttgttatagaaatggcttatacataag 34619510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 378 - 419
Target Start/End: Original strand, 42556668 - 42556709
Alignment:
Q  378 aactttccaggatagcttatgaaagcaacttatagcttatat 419  Q
    |||| |||| |||||||||||||| |||||||||||||||||    
T  42556668 aactctccatgatagcttatgaaaacaacttatagcttatat 42556709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 383 - 444
Target Start/End: Complemental strand, 44422727 - 44422666
Alignment:
Q  383 tccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatc 444  Q
    ||||||||||||||| |||  | |||||||||||||| |||||| |||||  ||||||||||    
T  44422727 tccaggatagcttataaaaatagcttatagcttatatgaaaacagtttgagattattttatc 44422666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 388 - 445
Target Start/End: Complemental strand, 49888790 - 49888733
Alignment:
Q  388 gatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    |||||||||||||| ||||| ||||||||||  |||||||||  || |||||||||||    
T  49888790 gatagcttatgaaaacaactaatagcttatacgaaaacaattaaactttattttatct 49888733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 359 - 432
Target Start/End: Original strand, 35813 - 35885
Alignment:
Q  359 agcttatgacatgtccatgaactttccaggatagcttatgaaagcaacttatagcttatatcaaaacaatttga 432  Q
    |||||||||||||||||| | || |||||||||| ||||||||||| | |||||||||||| |||| |||||||    
T  35813 agcttatgacatgtccataagctctccaggatagtttatgaaagcagc-tatagcttatataaaaataatttga 35885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 38; Significance: 0.000000000005; HSPs: 3)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 388 - 445
Target Start/End: Complemental strand, 27599 - 27542
Alignment:
Q  388 gatagcttatgaaagcaacttatagcttatatcaaaacaatttgaccttattttatct 445  Q
    ||||| |||||||| |||||||||| |||||| ||||||||||||| |||||||||||    
T  27599 gatagtttatgaaaacaacttatagtttatatgaaaacaatttgactttattttatct 27542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 371
Target Start/End: Complemental strand, 27700 - 27640
Alignment:
Q  311 ctactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatg 371  Q
    ||||||||||| |||||| ||||||||||||| | ||||| || |||||||||||||||||    
T  27700 ctactgacatatgtacttctgagactgtttgggagagcttatggaaatagcttatgacatg 27640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #3
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 483 - 515
Target Start/End: Complemental strand, 23838 - 23806
Alignment:
Q  483 ataagtgtttaattaagttgtttatccaaacag 515  Q
    |||||||||||||||||||||||||||||||||    
T  23838 ataagtgtttaattaagttgtttatccaaacag 23806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 312 - 376
Target Start/End: Original strand, 10564 - 10628
Alignment:
Q  312 tactgacataagtacttgtgagactgtttggaaaagcttttgaaaatagcttatgacatgtccat 376  Q
    ||||||||||||||||||||||||||||||  ||||||| || ||| | || |||||||||||||    
T  10564 tactgacataagtacttgtgagactgtttgacaaagcttatgtaaacaactaatgacatgtccat 10628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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