View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2679_low_2 (Length: 655)

Name: NF2679_low_2
Description: NF2679
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2679_low_2
NF2679_low_2
[»] chr2 (9 HSPs)
chr2 (47-469)||(14373377-14373800)
chr2 (517-645)||(14373925-14374053)
chr2 (470-523)||(14373846-14373899)
chr2 (99-163)||(43586007-43586071)
chr2 (98-163)||(44605140-44605205)
chr2 (93-134)||(16630817-16630858)
chr2 (97-134)||(22131254-22131291)
chr2 (99-155)||(18512144-18512200)
chr2 (99-159)||(18570969-18571029)
[»] chr3 (9 HSPs)
chr3 (1-50)||(9108745-9108794)
chr3 (94-134)||(44427863-44427903)
chr3 (99-162)||(49179717-49179780)
chr3 (99-149)||(14338485-14338535)
chr3 (96-134)||(30184105-30184143)
chr3 (97-134)||(1502596-1502633)
chr3 (1-41)||(8755532-8755572)
chr3 (107-163)||(34409352-34409408)
chr3 (94-134)||(47775747-47775787)
[»] chr5 (11 HSPs)
chr5 (99-163)||(10010547-10010611)
chr5 (94-163)||(32444759-32444828)
chr5 (93-149)||(30080497-30080553)
chr5 (110-150)||(42192282-42192322)
chr5 (103-134)||(10009848-10009879)
chr5 (95-134)||(14818301-14818340)
chr5 (97-134)||(10948658-10948695)
chr5 (92-125)||(31572648-31572681)
chr5 (94-155)||(9031920-9031983)
chr5 (94-134)||(38749560-38749600)
chr5 (94-134)||(43208271-43208311)
[»] chr1 (6 HSPs)
chr1 (92-163)||(40176596-40176667)
chr1 (92-134)||(14332430-14332472)
chr1 (99-134)||(31667447-31667482)
chr1 (99-134)||(50195467-50195502)
chr1 (97-134)||(30847720-30847757)
chr1 (99-155)||(28170383-28170438)
[»] chr7 (12 HSPs)
chr7 (92-149)||(1885580-1885637)
chr7 (99-163)||(5937423-5937487)
chr7 (99-163)||(22801743-22801807)
chr7 (92-134)||(44172885-44172927)
chr7 (99-134)||(25956467-25956502)
chr7 (99-134)||(36013800-36013835)
chr7 (94-128)||(3142075-3142109)
chr7 (104-149)||(2144546-2144591)
chr7 (101-134)||(38134410-38134443)
chr7 (106-134)||(2143862-2143890)
chr7 (99-159)||(17285061-17285121)
chr7 (92-128)||(23128656-23128692)
[»] chr6 (12 HSPs)
chr6 (604-648)||(12078333-12078377)
chr6 (76-135)||(7942276-7942335)
chr6 (94-149)||(19369824-19369879)
chr6 (99-149)||(6751884-6751934)
chr6 (101-134)||(10158006-10158039)
chr6 (94-134)||(785452-785492)
chr6 (92-135)||(602663-602706)
chr6 (105-155)||(10031571-10031621)
chr6 (109-159)||(31430277-31430327)
chr6 (94-134)||(9024173-9024213)
chr6 (98-134)||(10335377-10335413)
chr6 (99-163)||(34868159-34868223)
[»] chr4 (11 HSPs)
chr4 (94-134)||(37496726-37496766)
chr4 (94-158)||(11797625-11797692)
chr4 (99-155)||(13117430-13117486)
chr4 (94-134)||(18513238-18513278)
chr4 (92-127)||(41584570-41584605)
chr4 (71-113)||(6916437-6916479)
chr4 (99-149)||(13307884-13307934)
chr4 (97-134)||(40224498-40224535)
chr4 (94-134)||(22799890-22799930)
chr4 (99-155)||(44362667-44362723)
chr4 (94-134)||(53622591-53622631)
[»] chr8 (6 HSPs)
chr8 (99-134)||(31548295-31548330)
chr8 (99-134)||(10002165-10002200)
chr8 (99-157)||(27733846-27733904)
chr8 (97-163)||(42874515-42874581)
chr8 (103-163)||(26915246-26915306)
chr8 (94-134)||(31681827-31681867)
[»] scaffold0024 (1 HSPs)
scaffold0024 (94-163)||(18105-18174)
[»] scaffold0314 (1 HSPs)
scaffold0314 (99-149)||(8955-9005)


Alignment Details
Target: chr2 (Bit Score: 351; Significance: 0; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 351; E-Value: 0
Query Start/End: Original strand, 47 - 469
Target Start/End: Original strand, 14373377 - 14373800
Alignment:
Q  47 cctctgatcaaaagcgtgtcccgatgtttgacatgtgttagtgttcaacacaacaccgacacatgtgattacattgaattatgtcattgcgtcaaaattt 146  Q
    ||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14373377 cctctgatcaaaagcgtgtcccgattttcgacatgtcttagtgttcaacacaacaccgacacatgtgattacattgaattatgtcattgcgtcaaaattt 14373476  T
Q  147 tattggtgttgacgtgtgcttcatagataattacaggctgggatttaatatagatgcacctttggtgtgattttacatcaagttttgtgaagtgttagtt 246  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14373477 tattggtgttgacgtgtgcttcatagataattacaggctgggatctaatatagatgcacctttggtgtgattttacatcaagttttgtgaagtgttagtt 14373576  T
Q  247 ttagttaattagcctcttgcattaatcaatggttttaagtattataataataagtgtcattgtcgatgacacttgattgagtannnnnnnnnnnnnnntt 346  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||               ||    
T  14373577 atagttaattagcctcttgcattaatcaatggttttaagtattataataataagtgtcattgtcgatgacacttgattgagtaagagagagagagagatt 14373676  T
Q  347 ggaagcaagcaaactaggacattgattttagtggcacatagatttttgttgctagac-tttgtcttttgtattcttttaccattgacagaaggagctttt 445  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  14373677 ggaagcaagcaaactaggacattgattttagtggcacatagatttttgttgctagacttttgtcttttgtattcttttaccattgacagaaggagctttt 14373776  T
Q  446 tgtttgcttatggtgatcaattga 469  Q
    ||||||||||||||||||||||||    
T  14373777 tgtttgcttatggtgatcaattga 14373800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 517 - 645
Target Start/End: Original strand, 14373925 - 14374053
Alignment:
Q  517 ccaaacaggaactgaatataattttgtcnnnnnnngttggaatgaaatacatgaatttacaactagagatgcttggcatttagctactgtgaagtctgaa 616  Q
    ||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14373925 ccaaacaggaactgaatataattttgtctttttttgttggaatgaaatacatgaatttacaactagagatgcttggcatttagctactgtgaagtctgaa 14374024  T
Q  617 gttagattatctttcttgacctctctgtg 645  Q
    |||||||||||||||||| ||||||||||    
T  14374025 gttagattatctttcttggcctctctgtg 14374053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 470 - 523
Target Start/End: Original strand, 14373846 - 14373899
Alignment:
Q  470 ctaaactctagaaattgtagcttccctatttcatgtctaaagaccttccaaaca 523  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14373846 ctaaactctagaaattgtagcttccctatttcatgtctaaagaccttctaaaca 14373899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 43586007 - 43586071
Alignment:
Q  99 acaccgacacatgtgattacattgaattatgtcattgcgtcaaaattttattggtgttgacgtgt 163  Q
    |||||||||| |||||||||||||||||||||||||   ||||||||||||  ||||||||||||    
T  43586007 acaccgacacttgtgattacattgaattatgtcattttctcaaaattttatctgtgttgacgtgt 43586071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 163
Target Start/End: Original strand, 44605140 - 44605205
Alignment:
Q  98 aacaccgacacatgtgattacattgaattatgtcattgcgtcaaaattttattggtgttgacgtgt 163  Q
    ||||||||||||||| ||||||||||||||||| |||   ||||| | ||||||| ||||||||||    
T  44605140 aacaccgacacatgtaattacattgaattatgttattttctcaaattattattggcgttgacgtgt 44605205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 134
Target Start/End: Complemental strand, 16630858 - 16630817
Alignment:
Q  93 aacacaacaccgacacatgtgattacattgaattatgtcatt 134  Q
    |||| ||||| |||||||||||||| ||||||||||||||||    
T  16630858 aacataacactgacacatgtgattaaattgaattatgtcatt 16630817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 134
Target Start/End: Original strand, 22131254 - 22131291
Alignment:
Q  97 caacaccgacacatgtgattacattgaattatgtcatt 134  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  22131254 caacaccgacacatgtgattacattgaacaatgtcatt 22131291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 99 - 155
Target Start/End: Original strand, 18512144 - 18512200
Alignment:
Q  99 acaccgacacatgtgattacattgaattatgtcattgcgtcaaaattttattggtgt 155  Q
    |||| ||||||||||||||||||||||||| | |||   |||||||||||| |||||    
T  18512144 acactgacacatgtgattacattgaattatattattttctcaaaattttatcggtgt 18512200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 99 - 159
Target Start/End: Complemental strand, 18571029 - 18570969
Alignment:
Q  99 acaccgacacatgtgattacattgaattatgtcattgcgtcaaaattttattggtgttgac 159  Q
    |||| ||||||| |||||||||||||||||||||||   ||||| | |||| |||||||||    
T  18571029 acactgacacatatgattacattgaattatgtcattttctcaaattattatcggtgttgac 18570969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 50; Significance: 3e-19; HSPs: 9)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 9108745 - 9108794
Alignment:
Q  1 tcatcaatgaagttttttgccttctttttcgtcgttatctttgctgcctc 50  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9108745 tcatcaatgaagttttttgccttctttttcgtcgttatctttgctgcctc 9108794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 44427903 - 44427863
Alignment:
Q  94 acacaacaccgacacatgtgattacattgaattatgtcatt 134  Q
    |||| |||||||||||||||||||||||| |||||||||||    
T  44427903 acacgacaccgacacatgtgattacattggattatgtcatt 44427863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 162
Target Start/End: Original strand, 49179717 - 49179780
Alignment:
Q  99 acaccgacacatgtgattacattgaattatgtcattgcgtcaaaattttattggtgttgacgtg 162  Q
    |||||||||| ||||||||||| ||||||||||| |   |||||||||||| ||||| ||||||    
T  49179717 acaccgacacttgtgattacatcgaattatgtcactttctcaaaattttatcggtgtcgacgtg 49179780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 99 - 149
Target Start/End: Original strand, 14338485 - 14338535
Alignment:
Q  99 acaccgacacatgtgattacattgaattatgtcattgcgtcaaaattttat 149  Q
    |||||||||  |||||||||||||||||||||||||   ||||||||||||    
T  14338485 acaccgacatttgtgattacattgaattatgtcattttttcaaaattttat 14338535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 30184105 - 30184143
Alignment:
Q  96 acaacaccgacacatgtgattacattgaattatgtcatt 134  Q
    ||||||||||||||||| |||||| ||||||||||||||    
T  30184105 acaacaccgacacatgtaattacactgaattatgtcatt 30184143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 134
Target Start/End: Complemental strand, 1502633 - 1502596
Alignment:
Q  97 caacaccgacacatgtgattacattgaattatgtcatt 134  Q
    |||||| |||||||||||||||||| ||||||||||||    
T  1502633 caacacagacacatgtgattacattcaattatgtcatt 1502596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 8755532 - 8755572
Alignment:
Q  1 tcatcaatgaagttttttgccttctttttcgtcgttatctt 41  Q
    ||||||||||||||||| |||||||||||||| ||| ||||    
T  8755532 tcatcaatgaagtttttcgccttctttttcgttgttgtctt 8755572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 107 - 163
Target Start/End: Original strand, 34409352 - 34409408
Alignment:
Q  107 acatgtgattacattgaattatgtcattgcgtcaaaattttattggtgttgacgtgt 163  Q
    ||||||||||||||||||||||||||||   || || | |||| |||||||||||||    
T  34409352 acatgtgattacattgaattatgtcattttctcgaagtattatcggtgttgacgtgt 34409408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 47775787 - 47775747
Alignment:
Q  94 acacaacaccgacacatgtgattacattgaattatgtcatt 134  Q
    |||||||||| |||||||| ||||||||||||||| |||||    
T  47775787 acacaacaccaacacatgtaattacattgaattatatcatt 47775747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 10010611 - 10010547
Alignment:
Q  99 acaccgacacatgtgattacattgaattatgtcattgcgtcaaaattttattggtgttgacgtgt 163  Q
    ||||||||||||||||||||| ||||||||||||||   ||||||||||||| ||||||| ||||    
T  10010611 acaccgacacatgtgattacaatgaattatgtcattttttcaaaattttattagtgttgaggtgt 10010547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 163
Target Start/End: Complemental strand, 32444828 - 32444759
Alignment:
Q  94 acacaacaccgacacatgtgattacattgaattatgtcattgcgtcaaaattttattggtgttgacgtgt 163  Q
    |||| |||||||||||| ||||||||||||||||||||||    ||||| | ||| ||||||||||||||    
T  32444828 acacgacaccgacacatttgattacattgaattatgtcatcttctcaaattgttaatggtgttgacgtgt 32444759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 93 - 149
Target Start/End: Original strand, 30080497 - 30080553
Alignment:
Q  93 aacacaacaccgacacatgtgattacattgaattatgtcattgcgtcaaaattttat 149  Q
    ||||| ||||||| || |||||||||||||||||||||||||   ||||||||||||    
T  30080497 aacaccacaccgatacttgtgattacattgaattatgtcattttctcaaaattttat 30080553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 150
Target Start/End: Complemental strand, 42192322 - 42192282
Alignment:
Q  110 tgtgattacattgaattatgtcattgcgtcaaaattttatt 150  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  42192322 tgtgattacattgaattatgtcattgtctcaaaattttatt 42192282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 103 - 134
Target Start/End: Complemental strand, 10009879 - 10009848
Alignment:
Q  103 cgacacatgtgattacattgaattatgtcatt 134  Q
    ||||||||||||||||||||||||||||||||    
T  10009879 cgacacatgtgattacattgaattatgtcatt 10009848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 134
Target Start/End: Original strand, 14818301 - 14818340
Alignment:
Q  95 cacaacaccgacacatgtgattacattgaattatgtcatt 134  Q
    |||||||||||||||| || ||||||||||||||||||||    
T  14818301 cacaacaccgacacatatgtttacattgaattatgtcatt 14818340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 134
Target Start/End: Original strand, 10948658 - 10948695
Alignment:
Q  97 caacaccgacacatgtgattacattgaattatgtcatt 134  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  10948658 caacaccgacacatgtgattacatttaatcatgtcatt 10948695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 92 - 125
Target Start/End: Original strand, 31572648 - 31572681
Alignment:
Q  92 caacacaacaccgacacatgtgattacattgaat 125  Q
    |||||||||||||||||||||||||| |||||||    
T  31572648 caacacaacaccgacacatgtgattatattgaat 31572681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 94 - 155
Target Start/End: Original strand, 9031920 - 9031983
Alignment:
Q  94 acacaacaccgacacat--gtgattacattgaattatgtcattgcgtcaaaattttattggtgt 155  Q
    ||||||||||||||| |  ||||||| |||||||||||||||| | |||||| ||||| |||||    
T  9031920 acacaacaccgacacttttgtgattagattgaattatgtcatttcctcaaaaatttatcggtgt 9031983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 38749560 - 38749600
Alignment:
Q  94 acacaacaccgacacatgtgattacattgaattatgtcatt 134  Q
    |||||||||| |||||| | |||||||||||||||||||||    
T  38749560 acacaacaccaacacatataattacattgaattatgtcatt 38749600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 43208271 - 43208311
Alignment:
Q  94 acacaacaccgacacatgtgattacattgaattatgtcatt 134  Q
    ||||||||| |||| || |||||||||||||||||||||||    
T  43208271 acacaacacagacagatatgattacattgaattatgtcatt 43208311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 92 - 163
Target Start/End: Complemental strand, 40176667 - 40176596
Alignment:
Q  92 caacacaacaccgacacatgtgattacattgaattatgtcattgcgtcaaaattttattggtgttgacgtgt 163  Q
    |||||| |||| |||||||||||||||||||||| | ||||||   |||||||||||| |||||||||||||    
T  40176667 caacacgacactgacacatgtgattacattgaatgaagtcattttctcaaaattttatcggtgttgacgtgt 40176596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 92 - 134
Target Start/End: Complemental strand, 14332472 - 14332430
Alignment:
Q  92 caacacaacaccgacacatgtgattacattgaattatgtcatt 134  Q
    |||| ||||||||||| ||||||||||||||||||||||||||    
T  14332472 caacgcaacaccgacatatgtgattacattgaattatgtcatt 14332430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 134
Target Start/End: Complemental strand, 31667482 - 31667447
Alignment:
Q  99 acaccgacacatgtgattacattgaattatgtcatt 134  Q
    ||||||||||||||||||||||| ||||||||||||    
T  31667482 acaccgacacatgtgattacatttaattatgtcatt 31667447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 134
Target Start/End: Original strand, 50195467 - 50195502
Alignment:
Q  99 acaccgacacatgtgattacattgaattatgtcatt 134  Q
    ||||||||||||||||||||||| ||||||||||||    
T  50195467 acaccgacacatgtgattacattcaattatgtcatt 50195502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 134
Target Start/End: Original strand, 30847720 - 30847757
Alignment:
Q  97 caacaccgacacatgtgattacattgaattatgtcatt 134  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  30847720 caacactgacacatatgattacattgaattatgtcatt 30847757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 99 - 155
Target Start/End: Complemental strand, 28170438 - 28170383
Alignment:
Q  99 acaccgacacatgtgattacattgaattatgtcattgcgtcaaaattttattggtgt 155  Q
    |||| ||||| ||| |||||||||||||||||||||   ||||||||||||||||||    
T  28170438 acactgacacttgttattacattgaattatgtcatt-tttcaaaattttattggtgt 28170383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000004; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 1885637 - 1885580
Alignment:
Q  92 caacacaacaccgacacatgtgattacattgaattatgtcattgcgtcaaaattttat 149  Q
    |||||| |||||||||| |||||||||||||||||||||||||   ||||||||||||    
T  1885637 caacacgacaccgacacttgtgattacattgaattatgtcattttttcaaaattttat 1885580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 5937423 - 5937487
Alignment:
Q  99 acaccgacacatgtgattacattgaattatgtcattgcgtcaaaattttattggtgttgacgtgt 163  Q
    |||| ||||| |||||||||||||||||||||||||   ||||||||||||  ||||||||||||    
T  5937423 acacagacacttgtgattacattgaattatgtcattttctcaaaattttatccgtgttgacgtgt 5937487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 22801743 - 22801807
Alignment:
Q  99 acaccgacacatgtgattacattgaattatgtcattgcgtcaaaattttattggtgttgacgtgt 163  Q
    |||||||||| |||||||||| ||||||||||||||   ||||||||| || |||||||||||||    
T  22801743 acaccgacacttgtgattacagtgaattatgtcattatctcaaaatttgatcggtgttgacgtgt 22801807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 92 - 134
Target Start/End: Original strand, 44172885 - 44172927
Alignment:
Q  92 caacacaacaccgacacatgtgattacattgaattatgtcatt 134  Q
    |||||||||||  ||||||||||||||||||||||||||||||    
T  44172885 caacacaacacaaacacatgtgattacattgaattatgtcatt 44172927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 134
Target Start/End: Complemental strand, 25956502 - 25956467
Alignment:
Q  99 acaccgacacatgtgattacattgaattatgtcatt 134  Q
    |||||||||| |||||||||||||||||||||||||    
T  25956502 acaccgacacttgtgattacattgaattatgtcatt 25956467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 134
Target Start/End: Original strand, 36013800 - 36013835
Alignment:
Q  99 acaccgacacatgtgattacattgaattatgtcatt 134  Q
    |||||||||| |||||||||||||||||||||||||    
T  36013800 acaccgacacgtgtgattacattgaattatgtcatt 36013835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 94 - 128
Target Start/End: Original strand, 3142075 - 3142109
Alignment:
Q  94 acacaacaccgacacatgtgattacattgaattat 128  Q
    ||||||||||||||||| |||||||||||||||||    
T  3142075 acacaacaccgacacatatgattacattgaattat 3142109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 149
Target Start/End: Original strand, 2144546 - 2144591
Alignment:
Q  104 gacacatgtgattacattgaattatgtcattgcgtcaaaattttat 149  Q
    ||||| |||||||||||||||||||||||||   ||||||||||||    
T  2144546 gacacgtgtgattacattgaattatgtcattttctcaaaattttat 2144591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 134
Target Start/End: Original strand, 38134410 - 38134443
Alignment:
Q  101 accgacacatgtgattacattgaattatgtcatt 134  Q
    |||||||||| |||||||||||||||||||||||    
T  38134410 accgacacatatgattacattgaattatgtcatt 38134443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 134
Target Start/End: Original strand, 2143862 - 2143890
Alignment:
Q  106 cacatgtgattacattgaattatgtcatt 134  Q
    |||||||||||||||||||||||||||||    
T  2143862 cacatgtgattacattgaattatgtcatt 2143890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 99 - 159
Target Start/End: Complemental strand, 17285121 - 17285061
Alignment:
Q  99 acaccgacacatgtgattacattgaattatgtcattgcgtcaaaattttattggtgttgac 159  Q
    |||| |||||||||||||| |||||||||| |||||   ||||| | ||||||||||||||    
T  17285121 acacagacacatgtgattaaattgaattatatcattctctcaaattattattggtgttgac 17285061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 23128656 - 23128692
Alignment:
Q  92 caacacaacaccgacacatgtgattacattgaattat 128  Q
    ||||||||||||||||||| |||||||| ||||||||    
T  23128656 caacacaacaccgacacatatgattacactgaattat 23128692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000002; HSPs: 12)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 604 - 648
Target Start/End: Complemental strand, 12078377 - 12078333
Alignment:
Q  604 tgtgaagtctgaagttagattatctttcttgacctctctgtggtg 648  Q
    |||||||||||| |||||||||||||||||| |||||||||||||    
T  12078377 tgtgaagtctgatgttagattatctttcttggcctctctgtggtg 12078333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 76 - 135
Target Start/End: Complemental strand, 7942335 - 7942276
Alignment:
Q  76 gacatgtgttagtgttcaacacaacaccgacacatgtgattacattgaattatgtcattg 135  Q
    |||| |||| ||||| | ||||| ||| ||||||||||||||||||||||||||||||||    
T  7942335 gacacgtgtcagtgtccgacacagcactgacacatgtgattacattgaattatgtcattg 7942276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 19369879 - 19369824
Alignment:
Q  94 acacaacaccgacacatgtgattacattgaattatgtcattgcgtcaaaattttat 149  Q
    |||| |||||||||| |||||||||||||||||||||||||   ||||||||||||    
T  19369879 acacgacaccgacacttgtgattacattgaattatgtcattttctcaaaattttat 19369824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 99 - 149
Target Start/End: Original strand, 6751884 - 6751934
Alignment:
Q  99 acaccgacacatgtgattacattgaattatgtcattgcgtcaaaattttat 149  Q
    |||||||||| |||||||||||||||||||||||||   ||||||||||||    
T  6751884 acaccgacacttgtgattacattgaattatgtcattttctcaaaattttat 6751934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 101 - 134
Target Start/End: Complemental strand, 10158039 - 10158006
Alignment:
Q  101 accgacacatgtgattacattgaattatgtcatt 134  Q
    ||||||||||||||||||||||||||||||||||    
T  10158039 accgacacatgtgattacattgaattatgtcatt 10158006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 785452 - 785492
Alignment:
Q  94 acacaacaccgacacatgtgattacattgaattatgtcatt 134  Q
    |||| |||||||||| |||||||||||||||||||||||||    
T  785452 acacgacaccgacacttgtgattacattgaattatgtcatt 785492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 92 - 135
Target Start/End: Complemental strand, 602706 - 602663
Alignment:
Q  92 caacacaacaccgacacatgtgattacattgaattatgtcattg 135  Q
    |||||| |||| |||||||||||||| |||||||||||||||||    
T  602706 caacacgacactgacacatgtgattatattgaattatgtcattg 602663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 105 - 155
Target Start/End: Complemental strand, 10031621 - 10031571
Alignment:
Q  105 acacatgtgattacattgaattatgtcattgcgtcaaaattttattggtgt 155  Q
    |||| |||||||||||||||||||||||||   |||||||||||| |||||    
T  10031621 acacttgtgattacattgaattatgtcattttctcaaaattttatcggtgt 10031571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 109 - 159
Target Start/End: Complemental strand, 31430327 - 31430277
Alignment:
Q  109 atgtgattacattgaattatgtcattgcgtcaaaattttattggtgttgac 159  Q
    ||||||||||||| ||| ||||||||   ||||||||||||||||||||||    
T  31430327 atgtgattacatttaatcatgtcattttctcaaaattttattggtgttgac 31430277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 9024173 - 9024213
Alignment:
Q  94 acacaacaccgacacatgtgattacattgaattatgtcatt 134  Q
    |||| |||| ||||||| |||||||||||||||||||||||    
T  9024173 acacgacactgacacatatgattacattgaattatgtcatt 9024213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 10335377 - 10335413
Alignment:
Q  98 aacaccgacacatgtgattacattgaattatgtcatt 134  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  10335377 aacaccgacacatctgattacattcaattatgtcatt 10335413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 99 - 163
Target Start/End: Original strand, 34868159 - 34868223
Alignment:
Q  99 acaccgacacatgtgattacattgaattatgtcattgcgtcaaaattttattggtgttgacgtgt 163  Q
    ||||||| | |||||||||||||||||||||  |||   |||||||||||| ||||| |||||||    
T  34868159 acaccgagaaatgtgattacattgaattatgatattctctcaaaattttatcggtgtcgacgtgt 34868223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000002; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 37496766 - 37496726
Alignment:
Q  94 acacaacaccgacacatgtgattacattgaattatgtcatt 134  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  37496766 acacaacaccgacacttgtgattacattgaattatgtcatt 37496726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 11797625 - 11797692
Alignment:
Q  94 acacaacaccgacacatgtgattacattgaattatgtca---ttgcgtcaaaattttattggtgttga 158  Q
    ||||||||||||||| |||||||||||| ||||||||||   ||   |||||||||||||||||||||    
T  11797625 acacaacaccgacacttgtgattacattaaattatgtcatttttttttcaaaattttattggtgttga 11797692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 99 - 155
Target Start/End: Complemental strand, 13117486 - 13117430
Alignment:
Q  99 acaccgacacatgtgattacattgaattatgtcattgcgtcaaaattttattggtgt 155  Q
    |||||||||| ||||||||||||||||| |||||||   || |||||||||||||||    
T  13117486 acaccgacacttgtgattacattgaattttgtcattttctccaaattttattggtgt 13117430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 18513238 - 18513278
Alignment:
Q  94 acacaacaccgacacatgtgattacattgaattatgtcatt 134  Q
    ||||||||| ||||||| |||||||||||||||||||||||    
T  18513238 acacaacactgacacatatgattacattgaattatgtcatt 18513278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 92 - 127
Target Start/End: Complemental strand, 41584605 - 41584570
Alignment:
Q  92 caacacaacaccgacacatgtgattacattgaatta 127  Q
    |||||||||||||||||||||||||||||| |||||    
T  41584605 caacacaacaccgacacatgtgattacattaaatta 41584570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 71 - 113
Target Start/End: Original strand, 6916437 - 6916479
Alignment:
Q  71 tgtttgacatgtgttagtgttcaacacaacaccgacacatgtg 113  Q
    |||||||||||||| || ||||||||||||||||||| |||||    
T  6916437 tgtttgacatgtgtcagcgttcaacacaacaccgacaaatgtg 6916479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 99 - 149
Target Start/End: Complemental strand, 13307934 - 13307884
Alignment:
Q  99 acaccgacacatgtgattacattgaattatgtcattgcgtcaaaattttat 149  Q
    ||||| |||| |||||||||||||||||||||||||   ||||||||||||    
T  13307934 acaccaacacttgtgattacattgaattatgtcattttctcaaaattttat 13307884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 134
Target Start/End: Original strand, 40224498 - 40224535
Alignment:
Q  97 caacaccgacacatgtgattacattgaattatgtcatt 134  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  40224498 caacaccgacacatatgattacattaaattatgtcatt 40224535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 22799890 - 22799930
Alignment:
Q  94 acacaacaccgacacatgtgattacattgaattatgtcatt 134  Q
    |||| |||| ||||| |||||||||||||||||||||||||    
T  22799890 acacgacactgacacgtgtgattacattgaattatgtcatt 22799930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 99 - 155
Target Start/End: Complemental strand, 44362723 - 44362667
Alignment:
Q  99 acaccgacacatgtgattacattgaattatgtcattgcgtcaaaattttattggtgt 155  Q
    ||||| |||| |||||||||||| ||||||||||||   |||||||||||| |||||    
T  44362723 acaccaacacttgtgattacattaaattatgtcattttctcaaaattttatcggtgt 44362667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 94 - 134
Target Start/End: Complemental strand, 53622631 - 53622591
Alignment:
Q  94 acacaacaccgacacatgtgattacattgaattatgtcatt 134  Q
    ||||||||||||||||||||||| |||| || |||||||||    
T  53622631 acacaacaccgacacatgtgattgcattcaagtatgtcatt 53622591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000006; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 99 - 134
Target Start/End: Original strand, 31548295 - 31548330
Alignment:
Q  99 acaccgacacatgtgattacattgaattatgtcatt 134  Q
    ||||||||||||||||||||||||||||||||||||    
T  31548295 acaccgacacatgtgattacattgaattatgtcatt 31548330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 99 - 134
Target Start/End: Original strand, 10002165 - 10002200
Alignment:
Q  99 acaccgacacatgtgattacattgaattatgtcatt 134  Q
    ||||||||||||||||||||||| ||||||||||||    
T  10002165 acaccgacacatgtgattacattaaattatgtcatt 10002200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 27733904 - 27733846
Alignment:
Q  99 acaccgacacatgtgattacattgaattatgtcattgcgtcaaaattttattggtgttg 157  Q
    ||||| |||| ||||||||||||||||||| |||||   |||||||||||| |||||||    
T  27733904 acaccaacacttgtgattacattgaattatatcattttctcaaaattttatcggtgttg 27733846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 97 - 163
Target Start/End: Complemental strand, 42874581 - 42874515
Alignment:
Q  97 caacaccgacacatgtgattacattgaattatgtcattgcgtcaaaattttattggtgttgacgtgt 163  Q
    |||||| ||||| |||||||||||||||||||||||||   ||||||| |||  ||||| |||||||    
T  42874581 caacactgacacttgtgattacattgaattatgtcattttctcaaaatgttaacggtgtcgacgtgt 42874515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 103 - 163
Target Start/End: Original strand, 26915246 - 26915306
Alignment:
Q  103 cgacacatgtgattacattgaattatgtcattgcgtcaaaattttattggtgttgacgtgt 163  Q
    |||||| |||||||||||| ||||||||||||   ||||||||||||  |||| |||||||    
T  26915246 cgacacttgtgattacattaaattatgtcattttctcaaaattttatccgtgtcgacgtgt 26915306  T

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Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 31681827 - 31681867
Alignment:
Q  94 acacaacaccgacacatgtgattacattgaattatgtcatt 134  Q
    |||| |||||||||||||||||| |||| ||||||||||||    
T  31681827 acacgacaccgacacatgtgatttcattcaattatgtcatt 31681867  T

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Target: scaffold0024 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 163
Target Start/End: Original strand, 18105 - 18174
Alignment:
Q  94 acacaacaccgacacatgtgattacattgaattatgtcattgcgtcaaaattttattggtgttgacgtgt 163  Q
    |||||||||| |||| || |||||||||||||||||| |||   |||||||||||| ||||| |||||||    
T  18105 acacaacaccaacacttgcgattacattgaattatgttattttctcaaaattttatcggtgtcgacgtgt 18174  T

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Target: scaffold0314 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0314
Description:

Target: scaffold0314; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 99 - 149
Target Start/End: Complemental strand, 9005 - 8955
Alignment:
Q  99 acaccgacacatgtgattacattgaattatgtcattgcgtcaaaattttat 149  Q
    |||||||||| ||||||||| |||||||||||||||   ||||||||||||    
T  9005 acaccgacacttgtgattacgttgaattatgtcattttctcaaaattttat 8955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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