View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2681_high_8 (Length: 410)
Name: NF2681_high_8
Description: NF2681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2681_high_8 |
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Alignment Details
Target: chr2 (Bit Score: 323; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 47 - 393
Target Start/End: Original strand, 24461897 - 24462242
Alignment:
| Q |
47 |
tattacacaagttggtacaaattattatcacctttgattttatattctttcaactcaaaaccaaaagtacattctaaaattacaatacaagttgttccat |
146 |
Q |
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| T |
24461897 |
tattacaca-gtcggtacaaattattatcacctttgattttatattctttcaactcaaaaccaaaagtacattctaaaattacaatacaagttgttccat |
24461995 |
T |
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| Q |
147 |
caagcattgcaaatccttatcagaacttccaccttctctaacagcatcaaacgctgcttgcttcagtttcaaagccctacttatttcctctccactccca |
246 |
Q |
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| T |
24461996 |
caagcattgtaaatccttatcagaacttccaccttctctaacagcatcaaacgctgcttgcttcagtttcaaagacctacttatttcctctccactccca |
24462095 |
T |
|
| Q |
247 |
ccaatggcctcagccaaaactctccccaactcatctgaatcaggaacactatttccaccctcacacactttcttcccaactttcaactcatctacaagca |
346 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
24462096 |
ccaatggcctcagccaaaactctccccaactcatctgaatcaggaacactatttccaccctcacacactttcttcccaactttcaactcatccacaagca |
24462195 |
T |
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| Q |
347 |
aagtagcatccacaaattgatctgcagtcattggccacgcaatcaaa |
393 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
24462196 |
aagtagcatccacaaattgatctgcagtcattggccacgcaatcaaa |
24462242 |
T |
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