View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2681_low_13 (Length: 336)
Name: NF2681_low_13
Description: NF2681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2681_low_13 |
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Alignment Details
Target: chr6 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 17 - 321
Target Start/End: Original strand, 6647667 - 6647972
Alignment:
| Q |
17 |
agatcactcttggataacaaagttgaaagtttacctgcattgaatcaagaaacactggaaaaataagaaaggttttagctatgctatgaaacgaggaaac |
116 |
Q |
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| T |
6647667 |
agatcactcttggataataaagttgaaagtttgcctgcattgaatcaagaaacactcaaaaaataagaatttttttagctatgctatgaaacgaggaaat |
6647766 |
T |
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| Q |
117 |
gaccgggctgcgattcgactcgagcaagaaagaagccgaacattgaa-ccaaaaaagaaaatatgtaccaggatatccttcagaccagtatattgatcca |
215 |
Q |
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| T |
6647767 |
gaccgggatgtgattcgactcgagcaagaaagaagccgatcattgaatccaaaaattaaaatatgtaccaggatatccttcagaccaatatattgatcca |
6647866 |
T |
|
| Q |
216 |
gttgcaggaaccaacatagtgaatattgcagcttttggtcgaattgcggaaacaacggtatattcaccaataccatggctaacttttccttccatctcta |
315 |
Q |
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| T |
6647867 |
gttgcaggaaccaacattgtgaatattgcagcttttggtcgaattgccgaaacaacagtatattcgccaataccatggctaacttttccttccatctcta |
6647966 |
T |
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| Q |
316 |
tctgtg |
321 |
Q |
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|||||| |
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| T |
6647967 |
tctgtg |
6647972 |
T |
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