View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2681_low_15 (Length: 328)
Name: NF2681_low_15
Description: NF2681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2681_low_15 |
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Alignment Details
Target: chr6 (Bit Score: 256; Significance: 1e-142; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 16 - 303
Target Start/End: Original strand, 12683527 - 12683814
Alignment:
| Q |
16 |
caacaagtgccaccagcagacggggcgcatgttaccatggaggaagctgatactgaggatgatcagccgcctcgagatgaagaagaatattatgacgatg |
115 |
Q |
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| T |
12683527 |
caacaggtgccaccagcagccggggcggatgtgaccatggaggaagctgagactgagaatgatcggccgcatcgagatgaagaagaatattatgacgatg |
12683626 |
T |
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| Q |
116 |
atgacggtgatgatgacgaggacgaagacgaaggtattgacaattatgaagtggttgccaacaaaccaccgccacctcaatgaaaataatgattgtaatt |
215 |
Q |
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| T |
12683627 |
atgacggtgatgatgacgaggacgaagacgaaggtattgacaattatgaagtggttgccaacaaaccaccgccacctcaatgaaaataatgattgtaatt |
12683726 |
T |
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| Q |
216 |
aatcattgaatgaggctctaggtaggggctaaaagagtgcatggactgttgtaaaaagtggcagtaagcggcggcaactacaccggca |
303 |
Q |
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| T |
12683727 |
aatcattgaatgaggctctaggtaggggctaaaagagtgcatggactgttgtaaaaagtggcagtaagcggcggcaactacaccggca |
12683814 |
T |
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