View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2682_low_8 (Length: 250)
Name: NF2682_low_8
Description: NF2682
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2682_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 43209899 - 43210142
Alignment:
| Q |
1 |
agtttgtttgtttctttctttctttgtctgatattttctttgatcacaataacatatggcacaccaattatgaaagctatgctactaaagtcaagatata |
100 |
Q |
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| T |
43209899 |
agtttgtttgtttgtttctttctttgtctgatattttctttgatcacaataacatatggcacaccaattatgaaagctatgctactaaagtcaagatata |
43209998 |
T |
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| Q |
101 |
tagatagagattcaaagatattattgttaattattattagtatgcaagtgtgtgtcgttttctattaaaagaaaaagaccaattagtgcactactacttt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43209999 |
tagatagagattcaaagatattattgttaattattattagtatgcaagtgtgtgtcgttttctattaaaagaaaaagaccaattagtgcactactacttt |
43210098 |
T |
|
| Q |
201 |
tctttatttgcattattagattagcataccaacagtattatcta |
244 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
43210099 |
tctttatttgcattattagattagcataccaacagtataatcta |
43210142 |
T |
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