View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2683-Insertion-3 (Length: 549)
Name: NF2683-Insertion-3
Description: NF2683
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2683-Insertion-3 |
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Alignment Details
Target: chr8 (Bit Score: 491; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 491; E-Value: 0
Query Start/End: Original strand, 8 - 547
Target Start/End: Complemental strand, 38342639 - 38342096
Alignment:
| Q |
8 |
acttataccaaattcaattacaccactagaagccaaaaaacttctgcggtgtgtagcagaacagaaccaa----gtatgctcacttctttctcaatcaaa |
103 |
Q |
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| T |
38342639 |
acttataccaaattcaattgcaccactccaagccaaaaaacttctgcggtgtgtagcagaacagaaccaaccaagtatgctcacttctttctcaatcaaa |
38342540 |
T |
|
| Q |
104 |
gaattgtatccacatagatgcatcttatgaataatcacaatgacacaacttgttgtattaaatatattcaagccatcacagacaattgaattcattacat |
203 |
Q |
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| T |
38342539 |
gaattgtatccacatagatgcatcttatgaataatcacaatgacacaacttgttgtattaaatatattcaagccatcacagacaattgaattcattacat |
38342440 |
T |
|
| Q |
204 |
acctggacctatttaccacaaccattttcttggtatcccaacacagtctccgtgactgggctctatcaaaacaatatgcagaattattctccaattttgt |
303 |
Q |
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| T |
38342439 |
acccagacctatttaccacaaccattttcttggtatcccaacacagtctctgtgactgggctctatcaaaacaatatgcagaattattctccaattttgt |
38342340 |
T |
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| Q |
304 |
gcccagataatctccaacatcctactagaatatatgccacgccacaacatcagcatgcattcacgcccaaagcaccaactctagattatagctcagcttt |
403 |
Q |
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||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38342339 |
gcccaaataatctccaacatcctactagaatatatgccacgccacaacatcagcacgcattcacgcccaaagcaccaactctagattatagctcagcttt |
38342240 |
T |
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| Q |
404 |
gttccagctgctatccgccaaagaaattataattctcagctgctctctcaaccaactcgaagctttatcttttcttctacctcaaactaagcactaccct |
503 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
38342239 |
gttccagctgctatccgccaaagaaattataattctcagctgctctctcaaccaactcgaagctttatcttttcttctacctcaaaataagcactaccct |
38342140 |
T |
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| Q |
504 |
gacatgtgtaaatatatgttattatgatttgtcatctttttcac |
547 |
Q |
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| T |
38342139 |
gacatgtgtaaatatatgttattatgatttgtcatctttttcac |
38342096 |
T |
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