View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2683R-Insertion-8 (Length: 520)
Name: NF2683R-Insertion-8
Description: NF2683R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2683R-Insertion-8 |
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| [»] chr8 (2 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 390; Significance: 0; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 390; E-Value: 0
Query Start/End: Original strand, 131 - 520
Target Start/End: Complemental strand, 36537341 - 36536952
Alignment:
| Q |
131 |
ctactacctcattgacacaagaaaacgaatcatccatgaagtcatttcaaagccgtttcaagtcattgatcaaaaaagtagttgaagctccaaaacactt |
230 |
Q |
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| T |
36537341 |
ctactacctcattgacacaagaaaacgaatcatccatgaagtcatttcaaagccgtttcaagtcattgatcaaaaaagtagttgaagctccaaaacactt |
36537242 |
T |
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| Q |
231 |
tcttttctccaccaaaacaaactcacttctaatccttgatcgcttttactacaaagataacaatgtatgtggccaacacctatttcttctagataccaaa |
330 |
Q |
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| T |
36537241 |
tcttttctccaccaaaacaaactcacttctaatccttgatcgcttttactacaaagataacaatgtatgtggccaacacctatttcttctagataccaaa |
36537142 |
T |
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| Q |
331 |
acaaaacatctcaaagagcttcatattccaagagttacaaattctgatatgggttataagatcatagcttcatgcaatggtttattttgtattgctcatt |
430 |
Q |
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| T |
36537141 |
acaaaacatctcaaagagcttcatattccaagagttacaaattctgatatgggttataagatcatagcttcatgcaatggtttattttgtattgctcatt |
36537042 |
T |
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| Q |
431 |
attccttagaccaatactcaacccttttcctttggaatccaaccacaaaacaaaccaaaagaatcattgaaccgccacatcgtcaacaac |
520 |
Q |
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| T |
36537041 |
attccttagaccaatactcaacccttttcctttggaatccaaccacaaaacaaaccaaaagaatcattgaaccgccacatcgtcaacaac |
36536952 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 22 - 136
Target Start/End: Complemental strand, 36537524 - 36537410
Alignment:
| Q |
22 |
atttcttagaaaccgttccacttccaccaatgagctcattccgttaactaaccgttccactctcacgttccaagactaccaaaactactcaaattcaata |
121 |
Q |
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| T |
36537524 |
atttcttagaaaccgttccacttccaccaatgagctcattccgttaactaaccgttccactctcacgttccaagactaccaaaactactcaaattcaata |
36537425 |
T |
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| Q |
122 |
cataaaactctacta |
136 |
Q |
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| T |
36537424 |
cataaaactctacta |
36537410 |
T |
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