View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2683_low_14 (Length: 398)
Name: NF2683_low_14
Description: NF2683
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2683_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 330; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 330; E-Value: 0
Query Start/End: Original strand, 11 - 381
Target Start/End: Complemental strand, 7162290 - 7161920
Alignment:
| Q |
11 |
agaatatcacttaaatgttgatttagctatacaatggaattatgttggaagattgtgttcttcgatatttaatttttcatcaaacatagtcaccttcaat |
110 |
Q |
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| T |
7162290 |
agaaaatcacttaaatgttgatttagctatacaatggagttatgttggaagattgtgttcttcgatatttaatttttcttcaaacatagtcaccttcaat |
7162191 |
T |
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| Q |
111 |
ggatgtttatgaaaatggtgaagagttagagatgnnnnnnnggttttgaaaatgtatatgaacaatagaattttttgaccaagatttttgttcgtctact |
210 |
Q |
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| T |
7162190 |
ggatgtttatgaaaatggtgatgagttagagatgaaaaaaaggttttgaaaatgtatatgaacaatagaattttttgaccaagatttttgttcgtctact |
7162091 |
T |
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| Q |
211 |
ctaaggaactattgagatacactagcttcatctactatttcaagagaaactaataatgaaggaaggtgaagccattatctgccatttctagtactcaatg |
310 |
Q |
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| T |
7162090 |
ctaaggaaccattgagatacactagcttcatctactatttcaagagaaactaataatgaaggaaggtgaagccattatctgccatttctagtactcaatg |
7161991 |
T |
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| Q |
311 |
atccaactaatacaagaatgaaatccatttattttttggaaatcaagaaaatcaaacaacagaaaccaaat |
381 |
Q |
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| T |
7161990 |
atccaactaatacaagaatgaaatccatttattttttggaaatcaagaaaatcaaacaacagaaaccaaat |
7161920 |
T |
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