View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2683_low_52 (Length: 235)
Name: NF2683_low_52
Description: NF2683
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2683_low_52 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 36537183 - 36536949
Alignment:
| Q |
1 |
aacaatgtaggtggccaacacttatttcttctagatacaaaaacaaaacacctaaaagagcttcatattccgagagttaaaaattctgatatggtttata |
100 |
Q |
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| T |
36537183 |
aacaatgtatgtggccaacacctatttcttctagataccaaaacaaaacatctcaaagagcttcatattccaagagttacaaattctgatatgggttata |
36537084 |
T |
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| Q |
101 |
agatcatagcttcatgcaatggtttattttgtattgctcattattccttagaccaatactcaacccttttcctttggaatccaaccacaaaacaaaccaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36537083 |
agatcatagcttcatgcaatggtttattttgtattgctcattattccttagaccaatactcaacccttttcctttggaatccaaccacaaaacaaaccaa |
36536984 |
T |
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| Q |
201 |
aagaatcattgaaccgccacatcgtcaacaacctt |
235 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
36536983 |
aagaatcattgaaccgccacatcgtcaacaacctt |
36536949 |
T |
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