View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2686_high_14 (Length: 374)
Name: NF2686_high_14
Description: NF2686
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2686_high_14 |
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Alignment Details
Target: chr7 (Bit Score: 277; Significance: 1e-155; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 1 - 357
Target Start/End: Complemental strand, 43689949 - 43689596
Alignment:
| Q |
1 |
tggtaagtcaggggctcagggctagaattcaggtgctcccataaattattttnnnnnnnnnnttgcttctgtggagtggcttaatgtatatgaatggtaa |
100 |
Q |
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| T |
43689949 |
tggtaagtcaggggctcagggctagaattcaggtgctcccataaattattttaaaaaaaaaattgcttctgtggagtggcttaatgtatatgaatggtaa |
43689850 |
T |
|
| Q |
101 |
gttgctggaatnnnnnnnnctcccaattgtaggtcatatggatgattaaactatgctaaagagggatcttgaatggaaataaatcacaagcatcacatta |
200 |
Q |
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| T |
43689849 |
gttgctggaataaaaaaaattcccaattgtaggtcatatggatgattaaactatgctaaagagggatcttgaatggaaa---atcataagcatcacatta |
43689753 |
T |
|
| Q |
201 |
ttattttgcaatggtcgaatcaggaagaagcaaagatggcacaatacaaccacctaaatcaaatgaagaaatatcatcttgacggaagaagttacttcca |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43689752 |
ttattttgcaatggtcgaatcaggaagaagcaaagatggcacaatacaactacctaaatcaaatgaagaaatatcatcttgacggaagaagttacttcca |
43689653 |
T |
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| Q |
301 |
tcggtcttcttgcttaggcttgaattaatcttatcaacagccacaagtagatcctag |
357 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43689652 |
tcggtcttcttgcttaggcttgaattaatcttatcaacagccacaagtagatcctag |
43689596 |
T |
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