View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2686_high_20 (Length: 307)
Name: NF2686_high_20
Description: NF2686
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2686_high_20 |
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Alignment Details
Target: chr1 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 13 - 291
Target Start/End: Complemental strand, 3225327 - 3225049
Alignment:
| Q |
13 |
aacaaaatggccacagcagagaatgaatatactcttgatacagtgagggagactttggttagacaagaagatacaattgtttttggtcttattgagagat |
112 |
Q |
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| T |
3225327 |
aacaaaatggccacagcagagaatgaatatactcttgatacagtgagggagactttggttagacaagaagatacaattgtttttggtcttattgagagat |
3225228 |
T |
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| Q |
113 |
caaagtttccttttaattctcaaacttatgatcagaattatcttcaaatccctggtttttatggctcattggttgagtttgttttcagcaatactgagat |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| |
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| T |
3225227 |
caaagtttccttttaattctcaaacttatgatcagaattatcttcaaatccctggtttttgtggctcattggttgagtttgttttcaccaatactgagat |
3225128 |
T |
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| Q |
213 |
tgttcaagctaaggttaatatttattatgctctttttggatttacttatttgaactttttgttactgacataagcattt |
291 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3225127 |
tgttcaagctaaggttaatatttattatgctctttttggatttacttatttgaactttttgttactgacataagcattt |
3225049 |
T |
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