View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2686_low_12 (Length: 408)
Name: NF2686_low_12
Description: NF2686
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2686_low_12 |
 | |
|
| [»] scaffold0181 (1 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 281; Significance: 1e-157; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 99 - 395
Target Start/End: Original strand, 3358647 - 3358943
Alignment:
| Q |
99 |
aactacatgtatgaaattatcagatggtttaccggggtccaaatcttctataagtttgcatacagtggaaaacgtgacaagatccttaactccgttcaat |
198 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3358647 |
aactacatgtatgaaattatcagatggtttaccggggtccaaatcttctataagtttgcatatagtggaaaacgtgacaagatccttaactccgttcaat |
3358746 |
T |
|
| Q |
199 |
atggatggtcattggtcaatcttttattgatactaggaatgagagccatgaaactgatgcttcagtagttgtagattcgttcacttctgagtctcttatc |
298 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||| |
|
|
| T |
3358747 |
atggatggtcattggtcaatcttttattgatactaggaatgagagccatgaaactgatgcttcagtagttgcagattctttcacttccgagtctcttatc |
3358846 |
T |
|
| Q |
299 |
ttgacagaaaccatcgacgtatatccggcaaacgcaccttataagaggaaagtaagccctgcaaatgctgaggaattcaaccattctagcacctcca |
395 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3358847 |
ttgacagaaaccatcgacgtatatccggcaaacgcaccttataagaggaaagtaagccctgcaaatgctgaggaattcaaccattctagcacctcca |
3358943 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 99 - 395
Target Start/End: Original strand, 3341738 - 3342034
Alignment:
| Q |
99 |
aactacatgtatgaaattatcagatggtttaccggggtccaaatcttctataagtttgcatacagtggaaaacgtgacaagatccttaactccgttcaat |
198 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3341738 |
aactacatgtatgaaattatcagatggtttaccggggtccaaatcttctataagtttgcatatagtggaaaacgtgacaagatccttaactccgttcaat |
3341837 |
T |
|
| Q |
199 |
atggatggtcattggtcaatcttttattgatactaggaatgagagccatgaaactgatgcttcagtagttgtagattcgttcacttctgagtctcttatc |
298 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||| |
|
|
| T |
3341838 |
atggatggtcattggtcaatcttttattgatactaggaatgagagccatgaaactgatgcttcagtagttgcagattctttcacttccgagtctcttatc |
3341937 |
T |
|
| Q |
299 |
ttgacagaaaccatcgacgtatatccggcaaacgcaccttataagaggaaagtaagccctgcaaatgctgaggaattcaaccattctagcacctcca |
395 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3341938 |
ttgacagaaaccatcgacgtatatctggcaaacgcaccttataagaggaaagtaagccctgcaaatgctgaggaattcaaccattctagcacctcca |
3342034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 281; Significance: 1e-157; HSPs: 5)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 99 - 395
Target Start/End: Original strand, 9087842 - 9088138
Alignment:
| Q |
99 |
aactacatgtatgaaattatcagatggtttaccggggtccaaatcttctataagtttgcatacagtggaaaacgtgacaagatccttaactccgttcaat |
198 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9087842 |
aactacatgtatgaaattatcagatggtttaccggggtccaaatcttctataagtttgcatatagtggaaaacgtgacaagatccttaactccgttcaat |
9087941 |
T |
|
| Q |
199 |
atggatggtcattggtcaatcttttattgatactaggaatgagagccatgaaactgatgcttcagtagttgtagattcgttcacttctgagtctcttatc |
298 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||| |
|
|
| T |
9087942 |
atggatggtcattggtcaatcttttattgatactaggaatgagagccatgaaactgatgcttcagtagttgcagattctttcacttccgagtctcttatc |
9088041 |
T |
|
| Q |
299 |
ttgacagaaaccatcgacgtatatccggcaaacgcaccttataagaggaaagtaagccctgcaaatgctgaggaattcaaccattctagcacctcca |
395 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9088042 |
ttgacagaaaccatcgacgtatatccggcaaacgcaccttataagaggaaagtaagccctgcaaatgctgaggaattcaaccattctagcacctcca |
9088138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 277; E-Value: 1e-155
Query Start/End: Original strand, 99 - 395
Target Start/End: Original strand, 32516963 - 32517259
Alignment:
| Q |
99 |
aactacatgtatgaaattatcagatggtttaccggggtccaaatcttctataagtttgcatacagtggaaaacgtgacaagatccttaactccgttcaat |
198 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32516963 |
aactacatgtatgaaattatcagatggtttaccgaggtccaaatcttctataagtttgcatatagtggaaaacgtgacaagatccttaactccgttcaat |
32517062 |
T |
|
| Q |
199 |
atggatggtcattggtcaatcttttattgatactaggaatgagagccatgaaactgatgcttcagtagttgtagattcgttcacttctgagtctcttatc |
298 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
32517063 |
atggatggtcattggtcaatcttttattgatactaggaatgagagccatgaaactgatgcttcagtagttgcagattctttcacttctgagtctcttatc |
32517162 |
T |
|
| Q |
299 |
ttgacagaaaccatcgacgtatatccggcaaacgcaccttataagaggaaagtaagccctgcaaatgctgaggaattcaaccattctagcacctcca |
395 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32517163 |
ttgacagaaaccatcggcgtatatccggcaaacgcaccttataagaggaaagtaagccctgcaaatgctgaggaattcaaccattctagcacctcca |
32517259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 99 - 395
Target Start/End: Complemental strand, 45881419 - 45881123
Alignment:
| Q |
99 |
aactacatgtatgaaattatcagatggtttaccggggtccaaatcttctataagtttgcatacagtggaaaacgtgacaagatccttaactccgttcaat |
198 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45881419 |
aactacatgtatgaaattatcagatggtttaccagggtccaaatcttctataagtttgcatatagtggaaaacgtgacaagatccttaactccgttcaat |
45881320 |
T |
|
| Q |
199 |
atggatggtcattggtcaatcttttattgatactaggaatgagagccatgaaactgatgcttcagtagttgtagattcgttcacttctgagtctcttatc |
298 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||| |
|
|
| T |
45881319 |
atggatggtcattggtcaatcttttattgatactaggaatgagagccatgaaactgatgcttcagtagttgcagattctttcacttccgagtctcttatc |
45881220 |
T |
|
| Q |
299 |
ttgacagaaaccatcgacgtatatccggcaaacgcaccttataagaggaaagtaagccctgcaaatgctgaggaattcaaccattctagcacctcca |
395 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45881219 |
ttgacagaaaccatcggcgtatatccggcaaacgcaccttataagaggaaagtaagccctgcaaatgctgaggaattcaaccattctagcacctcca |
45881123 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 99 - 395
Target Start/End: Original strand, 35813445 - 35813741
Alignment:
| Q |
99 |
aactacatgtatgaaattatcagatggtttaccggggtccaaatcttctataagtttgcatacagtggaaaacgtgacaagatccttaactccgttcaat |
198 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35813445 |
aactacatgtatgaaattatcagattgtttaccggggtccaaatcttctataagtttgcatatagtggaaaacgtgacaagatccttaactccgttcaat |
35813544 |
T |
|
| Q |
199 |
atggatggtcattggtcaatcttttattgatactaggaatgagagccatgaaactgatgcttcagtagttgtagattcgttcacttctgagtctcttatc |
298 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||| |||||| |||||||| |||||||||||| |
|
|
| T |
35813545 |
atggatggtcattggtcaatcttttattgatactaagaatgagagccatgaaactgatgcttcagtcgttgcagattctttcacttccgagtctcttatc |
35813644 |
T |
|
| Q |
299 |
ttgacagaaaccatcgacgtatatccggcaaacgcaccttataagaggaaagtaagccctgcaaatgctgaggaattcaaccattctagcacctcca |
395 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
35813645 |
ttgacagaaaccatcgacgtatatccggcaaacgcaccttataagaggaaagtaagccctgcaaatgctgaggaattcaatcattctagcacctcca |
35813741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 99 - 395
Target Start/End: Complemental strand, 2316058 - 2315769
Alignment:
| Q |
99 |
aactacatgtatgaaattatcagatggtttaccggggtccaaatcttctataagtttgcatacagtggaaaacgtgacaagatccttaactccgttcaat |
198 |
Q |
| |
|
||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||| |||| |
|
|
| T |
2316058 |
aactacaggtgtgagattatcagatggtttaccggggtccaaatcttctataagtttgcatatagtggaaaacgcaacaagatcctcaactccgtccaat |
2315959 |
T |
|
| Q |
199 |
atggatggtcattggtcaatcttttattgatactaggaatgagagccatgaaactgatgcttcagtagttgtagattcgttcacttctgagtctcttatc |
298 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||| ||| ||||||| |||| |
|
|
| T |
2315958 |
atggatggtca-------atcttttattgatactaggaatgagagcaatgaaactgatgcttcagtagttgcagattctttcatttcggagtctcctatc |
2315866 |
T |
|
| Q |
299 |
ttgacagaaaccatcgacgtatatccggcaaacgcaccttataagaggaaagtaagccctgcaaatgctgaggaattcaaccattctagcacctcca |
395 |
Q |
| |
|
||||||||| |||||||| ||||||||||||| |||||| ||||||||| ||||||||| || |||||||||||||||||||| |||||||||||| |
|
|
| T |
2315865 |
ttgacagaatccatcgacctatatccggcaaatgcacctgataagaggagggtaagccctacagatgctgaggaattcaaccatcctagcacctcca |
2315769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 99 - 393
Target Start/End: Complemental strand, 26276091 - 26275797
Alignment:
| Q |
99 |
aactacatgtatgaaattatcagatggtttaccggggtccaaatcttctataagtttgcatacagtggaaaacgtgacaagatccttaactccgttcaat |
198 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26276091 |
aactacatgtatgaaattatcagatggtttaccagggtccaaatcttctataagtttgcatatagtggaaaacgtgacaagatccttaactccgttcaat |
26275992 |
T |
|
| Q |
199 |
atggatggtcattggtcaatcttttattgatactaggaatgagagccatgaaactgatgcttcagtagttgtagattcgttcacttctgagtctcttatc |
298 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
26275991 |
atggatggtcattggttaatcttttattgatactaggaatgagagccatgaaactgatgcttcagtagttgcagattctttcacttctgagtctcttatc |
26275892 |
T |
|
| Q |
299 |
ttgacagaaaccatcgacgtatatccggcaaacgcaccttataagaggaaagtaagccctgcaaatgctgaggaattcaaccattctagcacctc |
393 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26275891 |
ttgacagaaaccatcgacgtatatccggcaaacgcaccttataagaggaaagtaagccctgcaaatgctgaggaattcaaccattctagcacctc |
26275797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 273; Significance: 1e-152; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 99 - 395
Target Start/End: Complemental strand, 39774229 - 39773933
Alignment:
| Q |
99 |
aactacatgtatgaaattatcagatggtttaccggggtccaaatcttctataagtttgcatacagtggaaaacgtgacaagatccttaactccgttcaat |
198 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39774229 |
aactacatgtatgaaattatcagattgtttaccggggtccaaatcttctataagtttgcatatagtggaaaacgtgacaagatccttaactccgttcaat |
39774130 |
T |
|
| Q |
199 |
atggatggtcattggtcaatcttttattgatactaggaatgagagccatgaaactgatgcttcagtagttgtagattcgttcacttctgagtctcttatc |
298 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||| |
|
|
| T |
39774129 |
atggatggtcattggtcaatcttttattgatactaggaatgagagccatgaaactgatgcttcagtagttgcagattctttcacttccgagtctcttatc |
39774030 |
T |
|
| Q |
299 |
ttgacagaaaccatcgacgtatatccggcaaacgcaccttataagaggaaagtaagccctgcaaatgctgaggaattcaaccattctagcacctcca |
395 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39774029 |
ttgacagaaaccatcgacgtatatccggcaaacgcaccttataagaggaaagtaaaccctgcaaatgctgaggaattcaaccattctagcacctcca |
39773933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 99 - 393
Target Start/End: Original strand, 5157387 - 5157681
Alignment:
| Q |
99 |
aactacatgtatgaaattatcagatggtttaccggggtccaaatcttctataagtttgcatacagtggaaaacgtgacaagatccttaactccgttcaat |
198 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5157387 |
aactacatgtatgaaattatcagatggtttatcggggtccaaatcttctataagtttgcatatagtggaaaacgtgacaagatccttaactccgttcaat |
5157486 |
T |
|
| Q |
199 |
atggatggtcattggtcaatcttttattgatactaggaatgagagccatgaaactgatgcttcagtagttgtagattcgttcacttctgagtctcttatc |
298 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||| |
|
|
| T |
5157487 |
atggatggtcattggtcaatcttttattgatactaggaatgagagccatgaaactgatgcttcagtagttgcagattctttcacttccgagtctcttatc |
5157586 |
T |
|
| Q |
299 |
ttgacagaaaccatcgacgtatatccggcaaacgcaccttataagaggaaagtaagccctgcaaatgctgaggaattcaaccattctagcacctc |
393 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5157587 |
ttgacagaaaccatcgacgtatatccgacaaacgcaccttataagaggaaagtaagccctgcaaatgctgaggaattcaaccattctagcacctc |
5157681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 99 - 395
Target Start/End: Complemental strand, 7331775 - 7331479
Alignment:
| Q |
99 |
aactacatgtatgaaattatcagatggtttaccggggtccaaatcttctataagtttgcatacagtggaaaacgtgacaagatccttaactccgttcaat |
198 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7331775 |
aactacatgtatgaaattatcagatggtttaccagggtccaaatcttctataagtttgcatatagtggaaaacgtgacaagatccttaactccgttcaat |
7331676 |
T |
|
| Q |
199 |
atggatggtcattggtcaatcttttattgatactaggaatgagagccatgaaactgatgcttcagtagttgtagattcgttcacttctgagtctcttatc |
298 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||| |
|
|
| T |
7331675 |
atggatggtcattggtcaatcttttattgatactaggaatgagagccatgaaactgatgcttcagtagttgcagattctttcacttccgagtctcttatc |
7331576 |
T |
|
| Q |
299 |
ttgacagaaaccatcgacgtatatccggcaaacgcaccttataagaggaaagtaagccctgcaaatgctgaggaattcaaccattctagcacctcca |
395 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7331575 |
ttgacagaaaccatcggcgtatatccggcaaacgcaccttataagaggaaagtaagccctgcaaatgctgaggaattcaaccattctagcacctcca |
7331479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 273; Significance: 1e-152; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 99 - 395
Target Start/End: Original strand, 21647753 - 21648049
Alignment:
| Q |
99 |
aactacatgtatgaaattatcagatggtttaccggggtccaaatcttctataagtttgcatacagtggaaaacgtgacaagatccttaactccgttcaat |
198 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21647753 |
aactacatgtatgaaattatcagatggtttaccggggtccaaatcttctataagtttgcatatagtggaaaacgtgacaagatccttaactccgttcaat |
21647852 |
T |
|
| Q |
199 |
atggatggtcattggtcaatcttttattgatactaggaatgagagccatgaaactgatgcttcagtagttgtagattcgttcacttctgagtctcttatc |
298 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||| |
|
|
| T |
21647853 |
atggatggtcattggtcaatcttttattgatactaggaatgagagccatgaaactgatgcttcagtagttgcagattctttcacttccgagtctcttatc |
21647952 |
T |
|
| Q |
299 |
ttgacagaaaccatcgacgtatatccggcaaacgcaccttataagaggaaagtaagccctgcaaatgctgaggaattcaaccattctagcacctcca |
395 |
Q |
| |
|
|||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21647953 |
ttgacaaaaaccatcgacgtatatccggaaaacgcaccttataagaggaaagtaagccctgcaaatgctgaggaattcaaccattctagcacctcca |
21648049 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 99 - 393
Target Start/End: Complemental strand, 37645069 - 37644775
Alignment:
| Q |
99 |
aactacatgtatgaaattatcagatggtttaccggggtccaaatcttctataagtttgcatacagtggaaaacgtgacaagatccttaactccgttcaat |
198 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37645069 |
aactacatgtatgaaattatcagatggtttaccggggtccaaatcttctataagtttccatatagtggaaaacgtgacaagatccttaactccgttcaat |
37644970 |
T |
|
| Q |
199 |
atggatggtcattggtcaatcttttattgatactaggaatgagagccatgaaactgatgcttcagtagttgtagattcgttcacttctgagtctcttatc |
298 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||| |
|
|
| T |
37644969 |
atggatggtcattggtcaatcttttattgatactaggaatgagagccatgaaactgatgcttcagtagttgcagattctttcacttccgagtctcttatc |
37644870 |
T |
|
| Q |
299 |
ttgacagaaaccatcgacgtatatccggcaaacgcaccttataagaggaaagtaagccctgcaaatgctgaggaattcaaccattctagcacctc |
393 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37644869 |
ttgacagaaaccatcgacgtatatccgacaaacgcaccttataagaggaaagtaagccctgcaaatgctgaggaattcaaccattctagcacctc |
37644775 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 99 - 393
Target Start/End: Complemental strand, 29982815 - 29982521
Alignment:
| Q |
99 |
aactacatgtatgaaattatcagatggtttaccggggtccaaatcttctataagtttgcatacagtggaaaacgtgacaagatccttaactccgttcaat |
198 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29982815 |
aactacatgtatgaaattatcagatggtttaccggggtccaaatcttctataagtttccatatagtggaaaacgtgacaagatccttaactccgttcaat |
29982716 |
T |
|
| Q |
199 |
atggatggtcattggtcaatcttttattgatactaggaatgagagccatgaaactgatgcttcagtagttgtagattcgttcacttctgagtctcttatc |
298 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||| |
|
|
| T |
29982715 |
atggatggtcattggtcaatcttttattgatactaggaatgagagccatgaaactgatgcttcagtagttgcagattctttcacttccgagtctcttatc |
29982616 |
T |
|
| Q |
299 |
ttgacagaaaccatcgacgtatatccggcaaacgcaccttataagaggaaagtaagccctgcaaatgctgaggaattcaaccattctagcacctc |
393 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
29982615 |
ttgacagaaaccatcgacgtatatccgacaaacgcaccttataagaggaaagtaagccttgcaaatgctgaggaattcaaccattctagcacctc |
29982521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 99 - 392
Target Start/End: Original strand, 15321966 - 15322257
Alignment:
| Q |
99 |
aactacatgtatgaaattatcagatggtttaccggggtccaaatcttctataagtttgcatacagtggaaaacgtgacaagatccttaactccgttcaat |
198 |
Q |
| |
|
||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |
|
|
| T |
15321966 |
aactacaggtgtgaaattatcagatggtttaccggggtccaaatcttctataagtttgcatatagtggaaaacgtgacaagatccttaactccgtccaat |
15322065 |
T |
|
| Q |
199 |
atggatggtcattggtcaatcttttattgatactaggaatgagagccatgaaactgatgcttcagtagttgtagattcgttcacttctgagtctcttatc |
298 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |
|
|
| T |
15322066 |
atggatggtcattggtcaatcttttattgatactaggaatgagagccatgaaactgatgcttcagtagttgcagattctttcacttctgagtctcttatc |
15322165 |
T |
|
| Q |
299 |
ttgacagaaaccatcgacgtatatccggcaaacgcaccttataagaggaaagtaagccctgcaaatgctgaggaattcaaccattctagcacct |
392 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15322166 |
ttgacagaaaccatcgacgtatatccgg-aaacgca-cttataagaggaaagtaagccctgcaaatgctgaggaattcaaccattctagcacct |
15322257 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 16 - 101
Target Start/End: Complemental strand, 20979747 - 20979662
Alignment:
| Q |
16 |
aggatcaatgacgacggcacgttggctttacccggcgaattagatagaaggttagtcatctgaactgctactttgtgaaccctaac |
101 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |
|
|
| T |
20979747 |
aggatcaatgacgacggcacgttggctttacgcggcgaattagatagaaggttggtcatctgaactgcaactttgtgaaccctaac |
20979662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 20966935 - 20966891
Alignment:
| Q |
16 |
aggatcaatgacgacggcacgttggctttacccggcgaattagat |
60 |
Q |
| |
|
|||||||||||||||||||| |||||||||| |||||||||||| |
|
|
| T |
20966935 |
aggatcaatgacgacggcactttggctttacgtggcgaattagat |
20966891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 270; Significance: 1e-151; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 99 - 392
Target Start/End: Original strand, 29379875 - 29380168
Alignment:
| Q |
99 |
aactacatgtatgaaattatcagatggtttaccggggtccaaatcttctataagtttgcatacagtggaaaacgtgacaagatccttaactccgttcaat |
198 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29379875 |
aactacatgtatgaaattatcagatggtttaccggggtccaaatcttctataagtttgcacatagtggaaaacgtgacaagatccttaactccgttcaat |
29379974 |
T |
|
| Q |
199 |
atggatggtcattggtcaatcttttattgatactaggaatgagagccatgaaactgatgcttcagtagttgtagattcgttcacttctgagtctcttatc |
298 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||| |
|
|
| T |
29379975 |
atggatggtcattggtcaatcttttattgatactaggaatgagagccatgaaactgatgcttcagtagttgcagattctttcacttccgagtctcttatc |
29380074 |
T |
|
| Q |
299 |
ttgacagaaaccatcgacgtatatccggcaaacgcaccttataagaggaaagtaagccctgcaaatgctgaggaattcaaccattctagcacct |
392 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29380075 |
ttgacagaaaccatcgacgtatatccggcaaacgcaccttataagagaaaagtaagccctgcaaatgctgaggaattcaaccattctagcacct |
29380168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 99 - 393
Target Start/End: Original strand, 2519709 - 2520002
Alignment:
| Q |
99 |
aactacatgtatgaaattatcagatggtttaccggggtccaaatcttctataagtttgcatacagtggaaaacgtgacaagatccttaactccgttcaat |
198 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2519709 |
aactacatgtatgaaattatcagatggtttaccggggttcaaatcttctataagtttgcatatagtggaaaacgtgacaagatccttaactccgttcaat |
2519808 |
T |
|
| Q |
199 |
atggatggtcattggtcaatcttttattgatactaggaatgagagccatgaaactgatgcttcagtagttgtagattcgttcacttctgagtctcttatc |
298 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||||||||||| |
|
|
| T |
2519809 |
atggatggtcat-ggtcaatcttttattgatactaggaatgagagccatgaaactgatgcttcagtagttgcagattctttcacttccgagtctcttatc |
2519907 |
T |
|
| Q |
299 |
ttgacagaaaccatcgacgtatatccggcaaacgcaccttataagaggaaagtaagccctgcaaatgctgaggaattcaaccattctagcacctc |
393 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2519908 |
ttgacagaaaccatcgacgtatatccggcaaacgcaccttataagaggaaagtaagccctgcaaatgctgaggaattcaaccattctagcacctc |
2520002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0181 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: scaffold0181
Description:
Target: scaffold0181; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 99 - 395
Target Start/End: Complemental strand, 17973 - 17677
Alignment:
| Q |
99 |
aactacatgtatgaaattatcagatggtttaccggggtccaaatcttctataagtttgcatacagtggaaaacgtgacaagatccttaactccgttcaat |
198 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17973 |
aactacatgtatgaaattatcagatggtttaccggggtccaaatcttctataaatttgcatatagtggaaaacgtgacaagatccttaactccgttcaat |
17874 |
T |
|
| Q |
199 |
atggatggtcattggtcaatcttttattgatactaggaatgagagccatgaaactgatgcttcagtagttgtagattcgttcacttctgagtctcttatc |
298 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| |||||||| |||||||||||| |
|
|
| T |
17873 |
atggatggtcattggtcgatcttttattgatactaggaatgagagcgatgaaactgatgcttcagtagttgcagattctttcacttccgagtctcttatc |
17774 |
T |
|
| Q |
299 |
ttgacagaaaccatcgacgtatatccggcaaacgcaccttataagaggaaagtaagccctgcaaatgctgaggaattcaaccattctagcacctcca |
395 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17773 |
ttgacagaaaccatcgacgtatatccaacaaacgcaccttataagaggaaagtaagccctgcaaatgctgaggaattcaaccattctagcacctcca |
17677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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