View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2686_low_19 (Length: 327)

Name: NF2686_low_19
Description: NF2686
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2686_low_19
NF2686_low_19
[»] chr3 (17 HSPs)
chr3 (16-313)||(10748362-10748663)
chr3 (19-133)||(18654675-18654782)
chr3 (23-104)||(24560308-24560382)
chr3 (23-133)||(25655049-25655154)
chr3 (16-60)||(220469-220513)
chr3 (23-133)||(21773844-21773947)
chr3 (23-99)||(37807176-37807245)
chr3 (23-60)||(36568982-36569019)
chr3 (16-60)||(16275777-16275821)
chr3 (23-59)||(37102228-37102264)
chr3 (23-104)||(41110400-41110474)
chr3 (17-60)||(43005812-43005855)
chr3 (21-60)||(52185144-52185183)
chr3 (23-60)||(9312550-9312587)
chr3 (23-60)||(30200167-30200204)
chr3 (23-60)||(41040029-41040066)
chr3 (16-60)||(55327498-55327542)
[»] chr7 (19 HSPs)
chr7 (23-104)||(33655187-33655261)
chr7 (23-133)||(41497036-41497139)
chr7 (23-60)||(18231714-18231751)
chr7 (23-104)||(24970244-24970318)
chr7 (17-60)||(32872854-32872897)
chr7 (19-133)||(40196607-40196714)
chr7 (19-134)||(40572310-40572417)
chr7 (23-104)||(22163189-22163262)
chr7 (23-104)||(22221897-22221970)
chr7 (23-104)||(34235086-34235160)
chr7 (23-60)||(1051578-1051614)
chr7 (23-60)||(4833610-4833647)
chr7 (23-60)||(10315761-10315798)
chr7 (16-49)||(31553254-31553287)
chr7 (23-60)||(37417712-37417749)
chr7 (40-133)||(39855953-39856047)
chr7 (19-60)||(47390984-47391025)
chr7 (60-104)||(18063670-18063714)
chr7 (28-60)||(43230364-43230396)
[»] chr4 (16 HSPs)
chr4 (19-133)||(27735807-27735914)
chr4 (19-133)||(5730905-5731012)
chr4 (23-104)||(45741981-45742055)
chr4 (28-104)||(46007785-46007854)
chr4 (29-104)||(16400891-16400959)
chr4 (23-60)||(34110933-34110970)
chr4 (23-104)||(26167028-26167102)
chr4 (28-133)||(35248748-35248846)
chr4 (23-60)||(31348400-31348437)
chr4 (29-104)||(45132586-45132654)
chr4 (30-104)||(36151667-36151734)
chr4 (60-133)||(37711205-37711278)
chr4 (23-66)||(49735547-49735590)
chr4 (23-64)||(41174469-41174510)
chr4 (27-60)||(54320562-54320595)
chr4 (71-103)||(23332654-23332686)
[»] chr5 (20 HSPs)
chr5 (16-104)||(28279548-28279629)
chr5 (23-104)||(10072726-10072800)
chr5 (23-104)||(20513524-20513602)
chr5 (23-60)||(13634839-13634876)
chr5 (16-64)||(16501862-16501910)
chr5 (23-130)||(16938544-16938644)
chr5 (23-59)||(20146945-20146981)
chr5 (23-104)||(4373645-4373719)
chr5 (23-104)||(9856971-9857045)
chr5 (23-104)||(36392229-36392303)
chr5 (23-104)||(37551498-37551572)
chr5 (23-104)||(37654328-37654402)
chr5 (16-104)||(17024296-17024377)
chr5 (23-60)||(14245167-14245204)
chr5 (23-60)||(26415021-26415058)
chr5 (23-60)||(37607022-37607059)
chr5 (23-60)||(37779231-37779268)
chr5 (23-133)||(7544198-7544301)
chr5 (18-60)||(22023495-22023538)
chr5 (19-60)||(36363160-36363201)
[»] chr2 (17 HSPs)
chr2 (16-104)||(39732801-39732882)
chr2 (23-102)||(15224773-15224845)
chr2 (22-64)||(36046282-36046324)
chr2 (19-60)||(12541894-12541935)
chr2 (23-66)||(23748217-23748260)
chr2 (58-133)||(19566928-19567003)
chr2 (23-60)||(17379940-17379977)
chr2 (23-60)||(34209592-34209629)
chr2 (23-60)||(42316843-42316880)
chr2 (28-64)||(36566935-36566971)
chr2 (31-66)||(9631682-9631717)
chr2 (27-104)||(16565868-16565938)
chr2 (27-104)||(37739974-37740044)
chr2 (28-133)||(36347625-36347723)
chr2 (31-64)||(39821793-39821826)
chr2 (32-60)||(27926681-27926709)
chr2 (60-104)||(31795878-31795922)
[»] chr1 (19 HSPs)
chr1 (19-134)||(45585760-45585868)
chr1 (18-60)||(43552066-43552108)
chr1 (19-60)||(36285649-36285690)
chr1 (23-133)||(30010394-30010497)
chr1 (23-104)||(32951397-32951471)
chr1 (23-104)||(40095012-40095086)
chr1 (19-104)||(49946663-49946741)
chr1 (23-103)||(8529891-8529964)
chr1 (28-104)||(50744365-50744434)
chr1 (19-60)||(7444623-7444664)
chr1 (16-60)||(10392000-10392045)
chr1 (23-60)||(35349541-35349578)
chr1 (23-60)||(41498532-41498569)
chr1 (16-59)||(28770852-28770895)
chr1 (19-104)||(42230629-42230707)
chr1 (23-104)||(51597759-51597833)
chr1 (71-133)||(2859052-2859114)
chr1 (23-60)||(20576210-20576247)
chr1 (60-104)||(44211014-44211058)
[»] chr6 (16 HSPs)
chr6 (23-104)||(4097591-4097665)
chr6 (23-61)||(33041589-33041627)
chr6 (23-64)||(1390443-1390484)
chr6 (23-64)||(10818340-10818381)
chr6 (23-60)||(21606923-21606960)
chr6 (24-64)||(1395760-1395800)
chr6 (28-60)||(33236079-33236111)
chr6 (23-104)||(13583810-13583884)
chr6 (19-66)||(14515593-14515640)
chr6 (23-60)||(2900038-2900075)
chr6 (23-60)||(5585381-5585418)
chr6 (23-60)||(30487384-30487421)
chr6 (19-60)||(31849238-31849279)
chr6 (17-64)||(665913-665961)
chr6 (24-60)||(9719111-9719147)
chr6 (24-60)||(9721218-9721254)
[»] scaffold0067 (1 HSPs)
scaffold0067 (23-64)||(39266-39307)
[»] chr8 (21 HSPs)
chr8 (23-104)||(11575485-11575559)
chr8 (15-133)||(42650404-42650518)
chr8 (35-104)||(1026940-1027002)
chr8 (23-104)||(31543151-31543225)
chr8 (16-133)||(16653011-16653121)
chr8 (16-104)||(30664452-30664533)
chr8 (28-133)||(40990268-40990366)
chr8 (21-104)||(4247594-4247670)
chr8 (23-60)||(7503033-7503070)
chr8 (19-64)||(31738547-31738592)
chr8 (23-64)||(37923157-37923198)
chr8 (16-60)||(11785654-11785698)
chr8 (23-66)||(1281265-1281308)
chr8 (23-66)||(30479796-30479839)
chr8 (26-60)||(37032507-37032541)
chr8 (23-60)||(9718558-9718595)
chr8 (23-60)||(29691001-29691038)
chr8 (60-104)||(3726964-3727008)
chr8 (28-60)||(11033545-11033577)
chr8 (28-60)||(33922648-33922680)
chr8 (60-104)||(41103615-41103659)
[»] scaffold0262 (1 HSPs)
scaffold0262 (23-104)||(16375-16449)
[»] scaffold0171 (1 HSPs)
scaffold0171 (17-56)||(16082-16121)
[»] scaffold0026 (1 HSPs)
scaffold0026 (23-99)||(1264-1337)
[»] scaffold0006 (1 HSPs)
scaffold0006 (60-104)||(81520-81564)


Alignment Details
Target: chr3 (Bit Score: 217; Significance: 1e-119; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 16 - 313
Target Start/End: Original strand, 10748362 - 10748663
Alignment:
Q  16 cattataaaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttattttnnnnnnncatg 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||       ||||    
T  10748362 cattataaaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttttatcacacttaatttattttagaaaaacatg 10748461  T
Q  116 ttatatactccgtaattttnnnnnnnnnn---gtaacacccccctccctctaaaccatcaatctaaacacacc-ttgataaaacaaggtctatattttat 211  Q
    ||||||||||||||||||              ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10748462 ttatatactccgtaatttaaaaaaaaaaaaaagtaacacccccctccctctaaaccatcaatctaaacacacccttgataaaacaaggtctatattttat 10748561  T
Q  212 tttactatattatacaaataaataaactaataatgagatgagaccatctcatggccggatcaacttagggtcatgttttaaatactgatggttgctcctt 311  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10748562 tttactatattatacaaataaataaactaataatgagatgagaccatctcatggccggatcaacttagggtcatgttttaaatactgatggttgctcctt 10748661  T
Q  312 tg 313  Q
    ||    
T  10748662 tg 10748663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 18654675 - 18654782
Alignment:
Q  19 tataaaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttattttnnnnnnncatgtta 118  Q
    |||||||| |||||| || ||||||||||||||||||||||||||       |||||||||||||| || | ||||||||||||||       |||||||    
T  18654675 tataaaatattttttgaagagttaacatattaacatgataaatga-------tcatataatacttcaattacacttaatttattttagagaaacatgtta 18654767  T
Q  119 tatactccgtaattt 133  Q
    |||| ||||||||||    
T  18654768 tatagtccgtaattt 18654782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 24560382 - 24560308
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    |||||||||||||||||||||||||||||||||||||| ||       |||||||||||||| |||| | ||||||||||||    
T  24560382 aaatgttttttaaaaagttaacatattaacatgataaacga-------tcatataatacttcaatcacatttaatttatttt 24560308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 133
Target Start/End: Original strand, 25655049 - 25655154
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttattttnnnnnnncatgttatata 122  Q
    ||||||||||| || |||||||||||||| |||||||||||| |      |||||||||||| |||| ||||||||||||||       |||||||||||    
T  25655049 aaatgttttttgaagagttaacatattaatatgataaatgatca-----tatataatacttcaatcacacttaatttattttagaaaaacatgttatata 25655143  T
Q  123 ctccgtaattt 133  Q
     ||||||||||    
T  25655144 gtccgtaattt 25655154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 220469 - 220513
Alignment:
Q  16 cattataaaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    |||||| |||||||||||||||||||||||||||||||| |||||    
T  220469 cattatgaaatgttttttaaaaagttaacatattaacataataaa 220513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 133
Target Start/End: Complemental strand, 21773947 - 21773844
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttattttnnnnnnncatgttatata 122  Q
    ||||||||||||||||||||||||||| ||||||||||  |       ||||||||| |||| |||| ||||||||||||||       |||||||||||    
T  21773947 aaatgttttttaaaaagttaacatatttacatgataaacaa-------tcatataattcttcaatcacacttaatttattttagaaaaacatgttatata 21773855  T
Q  123 ctccgtaattt 133  Q
     ||||||||||    
T  21773854 gtccgtaattt 21773844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 37807245 - 37807176
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaattt 99  Q
    ||||||||||||||||||||| |||||||||||||||| ||       |||||||||||||| |||| |||||||||    
T  37807245 aaatgttttttaaaaagttaatatattaacatgataaacga-------tcatataatacttcaatcacacttaattt 37807176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 36568982 - 36569019
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    |||||||||| |||||||||||||||||||||||||||    
T  36568982 aaatgtttttcaaaaagttaacatattaacatgataaa 36569019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 16275777 - 16275821
Alignment:
Q  16 cattataaaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    |||||| ||||||||| |||||||||||| |||||||||||||||    
T  16275777 cattatgaaatgttttataaaaagttaacttattaacatgataaa 16275821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 37102228 - 37102264
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataa 59  Q
    |||||||||||||||||||||||||||||||| ||||    
T  37102228 aaatgttttttaaaaagttaacatattaacataataa 37102264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 41110400 - 41110474
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    |||| |||| ||||||||||||||||||||||||||||  |       |||||||||||||| |||| ||||||||||||||    
T  41110400 aaatattttataaaaagttaacatattaacatgataaacaa-------tcatataatacttcaatcacacttaatttatttt 41110474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 43005812 - 43005855
Alignment:
Q  17 attataaaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    ||||| |||| |||||||||||||||||||||||| ||||||||    
T  43005812 attatgaaatattttttaaaaagttaacatattaatatgataaa 43005855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 52185183 - 52185144
Alignment:
Q  21 taaaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    |||||| |||| ||||||||||||||||||||||||||||    
T  52185183 taaaatattttataaaaagttaacatattaacatgataaa 52185144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 9312550 - 9312587
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    |||| |||| ||||||||||||||||||||||||||||    
T  9312550 aaatattttgtaaaaagttaacatattaacatgataaa 9312587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 30200167 - 30200204
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    ||||||||||||||||||| |||||||||||| |||||    
T  30200167 aaatgttttttaaaaagtttacatattaacataataaa 30200204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 41040029 - 41040066
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    |||| |||| ||||||||||||||||||||||||||||    
T  41040029 aaatattttataaaaagttaacatattaacatgataaa 41040066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 55327542 - 55327498
Alignment:
Q  16 cattataaaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    |||||| |||||||||||||||||||| | ||||||||| |||||    
T  55327542 cattatgaaatgttttttaaaaagttagcgtattaacataataaa 55327498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 2e-18; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 33655187 - 33655261
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    |||||||||||||||||||||||||||||||||||||||||       |||||||||||||| |||| ||||||||||||||    
T  33655187 aaatgttttttaaaaagttaacatattaacatgataaatga-------tcatataatacttcaatcacacttaatttatttt 33655261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 133
Target Start/End: Original strand, 41497036 - 41497139
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttattttnnnnnnncatgttatata 122  Q
    |||||||||||||||| ||||||||||||||||||||||||       ||||||||| |||| |||| ||||||||||||||       |||||||||||    
T  41497036 aaatgttttttaaaaatttaacatattaacatgataaatga-------tcatataattcttcaatcacacttaatttattttagaaaaacatgttatata 41497128  T
Q  123 ctccgtaattt 133  Q
     ||||||||||    
T  41497129 gtccgtaattt 41497139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 18231751 - 18231714
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    ||||||||||||||||||||||||||||||||||||||    
T  18231751 aaatgttttttaaaaagttaacatattaacatgataaa 18231714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 24970244 - 24970318
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    |||| ||||||||||||||||||||||||| ||||||| ||       |||||||||||||| |||| ||||||||||||||    
T  24970244 aaatattttttaaaaagttaacatattaacttgataaacga-------tcatataatacttcaatcacacttaatttatttt 24970318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 60
Target Start/End: Original strand, 32872854 - 32872897
Alignment:
Q  17 attataaaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    ||||||||||  ||||||||||||||||||||||||||||||||    
T  32872854 attataaaatactttttaaaaagttaacatattaacatgataaa 32872897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 40196607 - 40196714
Alignment:
Q  19 tataaaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttattttnnnnnnncatgtta 118  Q
    ||||||||||||| |||||||||||||||| ||| |||||||  |       |||||||||||||| |||| ||||||||||||||       |||||||    
T  40196607 tataaaatgttttataaaaagttaacatatcaacctgataaacaa-------tcatataatacttcaatcacacttaatttattttagaaaaacatgtta 40196699  T
Q  119 tatactccgtaattt 133  Q
    |||| ||||||||||    
T  40196700 tatattccgtaattt 40196714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 40572310 - 40572417
Alignment:
Q  19 tataaaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttattttnnnnnnncatgtta 118  Q
    |||||||| |||||||||| ||||||||||||||       ||||||||||||||||||||||||  ||||  |||||||||||||       ||| |||    
T  40572310 tataaaatattttttaaaa-gttaacatattaac-------atgataaaaggtcatataatactttaatcacgcttaatttattttagagaaacatatta 40572401  T
Q  119 tatactccgtaatttt 134  Q
    |||| |||||||||||    
T  40572402 tatagtccgtaatttt 40572417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 22163189 - 22163262
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    |||||||||||| ||||| ||||||||||||||||||| |||       ||||||||||||| |||| ||||||||||||||    
T  22163189 aaatgttttttagaaagt-aacatattaacatgataaacgat-------catataatacttcaatcacacttaatttatttt 22163262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 22221897 - 22221970
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    |||||||||||| ||||| ||||||||||||||||||| |||       ||||||||||||| |||| ||||||||||||||    
T  22221897 aaatgttttttagaaagt-aacatattaacatgataaacgat-------catataatacttcaatcacacttaatttatttt 22221970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 34235086 - 34235160
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    ||||||||| ||||||||||||||||||| ||||||||  |       |||||||||||||| |||| ||||||||||||||    
T  34235086 aaatgttttataaaaagttaacatattaatatgataaacaa-------tcatataatacttcaatcacacttaatttatttt 34235160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 1051578 - 1051614
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  1051578 aaatgttttttaaaaagttaacatatt-acatgataaa 1051614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 4833610 - 4833647
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  4833610 aaatgttttataaaaagttaacctattaacatgataaa 4833647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 10315798 - 10315761
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    |||||||||||||||| |||||||||||||| ||||||    
T  10315798 aaatgttttttaaaaatttaacatattaacaagataaa 10315761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 31553254 - 31553287
Alignment:
Q  16 cattataaaatgttttttaaaaagttaacatatt 49  Q
    |||||| |||||||||||||||||||||||||||    
T  31553254 cattatgaaatgttttttaaaaagttaacatatt 31553287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 37417712 - 37417749
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    ||||||||| ||||||||||||||||| ||||||||||    
T  37417712 aaatgttttctaaaaagttaacatattcacatgataaa 37417749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 133
Target Start/End: Original strand, 39855953 - 39856047
Alignment:
Q  40 ttaacatattaacatgataaat-gataaaaggtcatataatacttctatcatacttaatttattttnnnnnnncatgttatatactccgtaattt 133  Q
    |||||||||||||||| || || |||||| | |||||||||||||   ||| ||||||||||||||       ||||||||||| ||||||||||    
T  39855953 ttaacatattaacatgttatattgataaatgatcatataatacttaagtcacacttaatttattttagaaaaacatgttatatagtccgtaattt 39856047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 47391025 - 47390984
Alignment:
Q  19 tataaaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    |||||||  |||||||||| ||||||||||||||||||||||    
T  47391025 tataaaacattttttaaaatgttaacatattaacatgataaa 47390984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 18063670 - 18063714
Alignment:
Q  60 atgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    |||||||| | |||||||||||||| |||| ||||||||||||||    
T  18063670 atgataaatgatcatataatacttcaatcacacttaatttatttt 18063714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 43230396 - 43230364
Alignment:
Q  28 ttttttaaaaagttaacatattaacatgataaa 60  Q
    |||||| ||||||||||||||||||||||||||    
T  43230396 tttttttaaaagttaacatattaacatgataaa 43230364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 2e-18; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 19 - 133
Target Start/End: Complemental strand, 27735914 - 27735807
Alignment:
Q  19 tataaaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttattttnnnnnnncatgtta 118  Q
    |||||||||||||||||| ||||| ||||||||||||||||||||       |||||||||||||| |||| ||||||||||||||       |||||||    
T  27735914 tataaaatgttttttaaagagttagcatattaacatgataaatga-------tcatataatacttcaatcacacttaatttattttaaaaaaacatgtta 27735822  T
Q  119 tatactccgtaattt 133  Q
    |||| ||||||||||    
T  27735821 tatagtccgtaattt 27735807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 19 - 133
Target Start/End: Original strand, 5730905 - 5731012
Alignment:
Q  19 tataaaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttattttnnnnnnncatgtta 118  Q
    |||||||| |||||| || ||||||||||||||||||||||||||       |||||||||||||| || | ||||||||||||||       |||||||    
T  5730905 tataaaatattttttgaagagttaacatattaacatgataaatga-------tcatataatacttcaattacacttaatttattttagagaaacatgtta 5730997  T
Q  119 tatactccgtaattt 133  Q
    |||| ||||||||||    
T  5730998 tatagtccgtaattt 5731012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 45742055 - 45741981
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    |||||||||||||||||||||||||||||||||||||| ||       |||||||||||||| |||| | ||||||||||||    
T  45742055 aaatgttttttaaaaagttaacatattaacatgataaacga-------tcatataatacttcaatcacatttaatttatttt 45741981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 46007785 - 46007854
Alignment:
Q  28 ttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    ||||||||||||||||||||||||||||||||||||       |||||||||||||| |||  ||||||||||||||    
T  46007785 ttttttaaaaagttaacatattaacatgataaatga-------tcatataatacttcaatctcacttaatttatttt 46007854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 16400959 - 16400891
Alignment:
Q  29 tttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    |||||||||||||||||||||||||||||||| ||       |||||||||||||| |||||| ||||||||||||    
T  16400959 tttttaaaaagttaacatattaacatgataaacga-------tcatataatacttcaatcataattaatttatttt 16400891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 34110970 - 34110933
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34110970 aaatgttttttaaaaagttaacatattaacatgataaa 34110933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 26167102 - 26167028
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    ||||||||||| || ||||||||||||||||||||||| ||       |||||||||||||| |||| ||||||||||||||    
T  26167102 aaatgtttttttaagagttaacatattaacatgataaacga-------tcatataatacttcaatcacacttaatttatttt 26167028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 133
Target Start/End: Complemental strand, 35248846 - 35248748
Alignment:
Q  28 ttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttattttnnnnnnncatgttatatactccg 127  Q
    |||||| |||||||||| |||||||||||||||| ||       ||||||||||||| |||| ||||||||||||||       ||||||||||| ||||    
T  35248846 tttttttaaaagttaacgtattaacatgataaataat-------catataatacttcaatcacacttaatttattttagaaaaacatgttatatagtccg 35248754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 31348400 - 31348437
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  31348400 aaatgttttttaaaaagctaacatattaacatgataaa 31348437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 104
Target Start/End: Original strand, 45132586 - 45132654
Alignment:
Q  29 tttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    ||||||||||||||||||||||| |||||||| |||       ||||||||||||| |||| ||||||||||||||    
T  45132586 tttttaaaaagttaacatattaaaatgataaacgat-------catataatacttcaatcacacttaatttatttt 45132654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 104
Target Start/End: Complemental strand, 36151734 - 36151667
Alignment:
Q  30 ttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    |||| |||||||||||||||||||||||||| |||       ||||||||||||| |||| ||||||||||||||    
T  36151734 tttttaaaagttaacatattaacatgataaacgat-------catataatacttcaatcacacttaatttatttt 36151667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 133
Target Start/End: Complemental strand, 37711278 - 37711205
Alignment:
Q  60 atgataaaaggtcatataatacttctatcatacttaatttattttnnnnnnncatgttatatactccgtaattt 133  Q
    |||||||| | |||||||||||||| |||| ||||||||||||||       ||||||||||| ||||||||||    
T  37711278 atgataaatgatcatataatacttcaatcacacttaatttattttagagaaacatgttatatagtccgtaattt 37711205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 49735547 - 49735590
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataa 66  Q
    |||||| ||||||||||||||| ||||||||||||||| |||||    
T  49735547 aaatgtcttttaaaaagttaacctattaacatgataaacgataa 49735590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 41174510 - 41174469
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgat 64  Q
    ||||| |||||||||||||| ||||||||||| |||||||||    
T  41174510 aaatggtttttaaaaagttagcatattaacataataaatgat 41174469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 60
Target Start/End: Complemental strand, 54320595 - 54320562
Alignment:
Q  27 gttttttaaaaagttaacatattaacatgataaa 60  Q
    |||||||||||||||| |||||||||||||||||    
T  54320595 gttttttaaaaagttagcatattaacatgataaa 54320562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 71 - 103
Target Start/End: Original strand, 23332654 - 23332686
Alignment:
Q  71 tcatataatacttctatcatacttaatttattt 103  Q
    ||||||||||||||||||| |||||||||||||    
T  23332654 tcatataatacttctatcacacttaatttattt 23332686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 8e-18; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 28279548 - 28279629
Alignment:
Q  16 cattataaaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||       |||||||||||||| |||| ||||| ||||||||    
T  28279548 cattatgaaatgttttttaaaaagttaacatattaacatgataaatga-------tcatataatacttcaatcacacttagtttatttt 28279629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 10072726 - 10072800
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    |||| ||||||||||||||||||||||||||||||||| ||       |||||||||||||| |||||||||||||||||||    
T  10072726 aaatattttttaaaaagttaacatattaacatgataaacga-------tcatataatacttcaatcatacttaatttatttt 10072800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 20513524 - 20513602
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    |||||||||||||||||||||||||||| ||||||||| ||| | |    |||||||||||| |||| ||||||||||||||    
T  20513524 aaatgttttttaaaaagttaacatattatcatgataaacgatcata---tatataatacttcaatcacacttaatttatttt 20513602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 13634876 - 13634839
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    ||||||||||||||||||||||||||||||||||||||    
T  13634876 aaatgttttttaaaaagttaacatattaacatgataaa 13634839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 16501862 - 16501910
Alignment:
Q  16 cattataaaatgttttttaaaaagttaacatattaacatgataaatgat 64  Q
    |||||| ||||||||||| |||||||||||||||||||| |||||||||    
T  16501862 cattatgaaatgtttttttaaaagttaacatattaacataataaatgat 16501910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 23 - 130
Target Start/End: Complemental strand, 16938644 - 16938544
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttattttnnnnnnncatgttatata 122  Q
    |||||||||||||| ||||||||| ||||||||||||||||       |||||||||| ||| |||| ||||||||||||||       |||||||||||    
T  16938644 aaatgttttttaaagagttaacatgttaacatgataaatga-------tcatataatatttcaatcacacttaatttattttagagaaacatgttatata 16938552  T
Q  123 ctccgtaa 130  Q
     |||||||    
T  16938551 gtccgtaa 16938544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 23 - 59
Target Start/End: Original strand, 20146945 - 20146981
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataa 59  Q
    |||||||||||||||||||||||||||||||||||||    
T  20146945 aaatgttttttaaaaagttaacatattaacatgataa 20146981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 4373645 - 4373719
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    |||| |||||| |||||||||||||||||||||||||||||       |||||||||| ||| |||| ||||||||||||||    
T  4373645 aaatatttttttaaaagttaacatattaacatgataaatga-------tcatataatatttcaatcacacttaatttatttt 4373719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 9857045 - 9856971
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    |||||||||||||||||||||||||||||||| ||||| ||       |||||||||||||| |||| |||| |||||||||    
T  9857045 aaatgttttttaaaaagttaacatattaacataataaacga-------tcatataatacttcaatcacacttgatttatttt 9856971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 36392229 - 36392303
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    ||||||||| |||||||||||||||||||||||||||| ||       |||||||||||||| |||| ||||||| ||||||    
T  36392229 aaatgttttataaaaagttaacatattaacatgataaacga-------tcatataatacttcaatcacacttaatctatttt 36392303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 37551572 - 37551498
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    ||||||||| |||||||||||||||||||||||||||| ||       |||||||||||||| |||| || |||||||||||    
T  37551572 aaatgttttataaaaagttaacatattaacatgataaacga-------tcatataatacttcaatcacacataatttatttt 37551498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 37654402 - 37654328
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    ||||||||| |||||||||||||||||||||||||||| ||       |||||||||||||| |||| || |||||||||||    
T  37654402 aaatgttttataaaaagttaacatattaacatgataaacga-------tcatataatacttcaatcacacataatttatttt 37654328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 17024296 - 17024377
Alignment:
Q  16 cattataaaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    |||||| ||||||| |||||||||||| ||||||||||||| ||| ||       |||||||||||||| ||| |||||||||||||||    
T  17024296 cattatgaaatgttctttaaaaagttatcatattaacatgaaaaacga-------tcatataatacttcaatcgtacttaatttatttt 17024377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 14245167 - 14245204
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    |||||||||||| |||||||||||||||||||||||||    
T  14245167 aaatgttttttagaaagttaacatattaacatgataaa 14245204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 26415058 - 26415021
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  26415058 aaatgttttataaaaagttaacatattaacatgataaa 26415021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 37607059 - 37607022
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  37607059 aaatgttttataaaaagttaacatattaacatgataaa 37607022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 37779268 - 37779231
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  37779268 aaatgttttataaaaagttaacatattaacatgataaa 37779231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 133
Target Start/End: Complemental strand, 7544301 - 7544198
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttattttnnnnnnncatgttatata 122  Q
    |||||||||||||||||||| ||||||||||| |||||  |       |||||||||||||| |||| |||| |||||||||       |||||||||||    
T  7544301 aaatgttttttaaaaagttagcatattaacataataaacaa-------tcatataatacttcaatcacacttgatttattttagaaaaacatgttatata 7544209  T
Q  123 ctccgtaattt 133  Q
     ||||||||||    
T  7544208 gtccgtaattt 7544198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 22023538 - 22023495
Alignment:
Q  18 ttataaaatgttttttaaaaa-gttaacatattaacatgataaa 60  Q
    |||| |||||||||||||||| ||||||||||||||||||||||    
T  22023538 ttatgaaatgttttttaaaaaagttaacatattaacatgataaa 22023495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 36363201 - 36363160
Alignment:
Q  19 tataaaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    |||||||||| ||||| ||||||||||||||| |||||||||    
T  36363201 tataaaatgtcttttagaaagttaacatattagcatgataaa 36363160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 8e-18; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 16 - 104
Target Start/End: Original strand, 39732801 - 39732882
Alignment:
Q  16 cattataaaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    |||||| ||||||||| |||||||||||||||||||||||||||| ||       |||||||||||||| |||||||||||||||||||    
T  39732801 cattatgaaatgttttataaaaagttaacatattaacatgataaacga-------tcatataatacttcaatcatacttaatttatttt 39732882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 23 - 102
Target Start/End: Original strand, 15224773 - 15224845
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatt 102  Q
    ||||||||||||||||| |||||||||||||||||||||||       |||||||||||||| |||| ||||||||||||    
T  15224773 aaatgttttttaaaaagctaacatattaacatgataaatga-------tcatataatacttcaatcacacttaatttatt 15224845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 36046282 - 36046324
Alignment:
Q  22 aaaatgttttttaaaaagttaacatattaacatgataaatgat 64  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  36046282 aaaatgttttttaaaaagttaacatattaacatgttaaatgat 36046324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 12541935 - 12541894
Alignment:
Q  19 tataaaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  12541935 tataaaatgttttttaaaaagttaacacattaacatgataaa 12541894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 23748260 - 23748217
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataa 66  Q
    |||||| ||||||||||||||||||||||||||||||| |||||    
T  23748260 aaatgtcttttaaaaagttaacatattaacatgataaacgataa 23748217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 133
Target Start/End: Original strand, 19566928 - 19567003
Alignment:
Q  58 aaatgataaaaggtcatataatacttctatcatacttaatttattttnnnnnnncatgttatatactccgtaattt 133  Q
    |||||||||| |||| ||||||||||| |||| ||||||||||||||       ||||||||||| ||||||||||    
T  19566928 aaatgataaacggtcgtataatacttcaatcacacttaatttattttagaaaaacatgttatatagtccgtaattt 19567003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 17379977 - 17379940
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    |||||||||||||||||||| |||||||||||||||||    
T  17379977 aaatgttttttaaaaagttagcatattaacatgataaa 17379940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 34209629 - 34209592
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    |||| |||||||||||||||||||||||||||||||||    
T  34209629 aaatattttttaaaaagttaacatattaacatgataaa 34209592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 42316843 - 42316880
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    |||||||||||||||||||||| |||||||||||||||    
T  42316843 aaatgttttttaaaaagttaacgtattaacatgataaa 42316880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 36566935 - 36566971
Alignment:
Q  28 ttttttaaaaagttaacatattaacatgataaatgat 64  Q
    |||| ||||||||||||||||||||||||||||||||    
T  36566935 ttttataaaaagttaacatattaacatgataaatgat 36566971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 66
Target Start/End: Complemental strand, 9631717 - 9631682
Alignment:
Q  31 tttaaaaagttaacatattaacatgataaatgataa 66  Q
    |||||||||||||||||||||||||||||| |||||    
T  9631717 tttaaaaagttaacatattaacatgataaacgataa 9631682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 104
Target Start/End: Complemental strand, 16565938 - 16565868
Alignment:
Q  27 gttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    |||||||||||||||||||||| || |||||||| |||       ||||||||||||| |||| ||||||||||||||    
T  16565938 gttttttaaaaagttaacatataaatatgataaacgat-------catataatacttcaatcacacttaatttatttt 16565868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 104
Target Start/End: Original strand, 37739974 - 37740044
Alignment:
Q  27 gttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    |||||| |||||||||| |||||||||||||||| |||       ||||||||||||| |||| ||||||||||||||    
T  37739974 gtttttcaaaaagttaagatattaacatgataaacgat-------catataatacttcaatcacacttaatttatttt 37740044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 133
Target Start/End: Original strand, 36347625 - 36347723
Alignment:
Q  28 ttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttattttnnnnnnncatgttatatactccg 127  Q
    ||||||||| |||||||||||||||||||||||  |       | |||||||||||| |||| ||||||||||||||       ||||||||||| ||||    
T  36347625 ttttttaaatagttaacatattaacatgataaacaa-------ttatataatacttcaatcacacttaatttattttagaaaaacatgttatatagtccg 36347717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 64
Target Start/End: Complemental strand, 39821826 - 39821793
Alignment:
Q  31 tttaaaaagttaacatattaacatgataaatgat 64  Q
    |||||| |||||||||||||||||||||||||||    
T  39821826 tttaaagagttaacatattaacatgataaatgat 39821793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 60
Target Start/End: Complemental strand, 27926709 - 27926681
Alignment:
Q  32 ttaaaaagttaacatattaacatgataaa 60  Q
    |||||||||||||||||||||||||||||    
T  27926709 ttaaaaagttaacatattaacatgataaa 27926681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 31795878 - 31795922
Alignment:
Q  60 atgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    |||||||| | |||||||||||||| |||| ||||||||||||||    
T  31795878 atgataaacgatcatataatacttcaatcacacttaatttatttt 31795922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 19 - 134
Target Start/End: Original strand, 45585760 - 45585868
Alignment:
Q  19 tataaaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttattttnnnnnnncatgtta 118  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||       ||||||| |||||| |||| ||||||||||||||       |||||||    
T  45585760 tataaaatgtttttttaaaagttaacatattaacatgataaacga-------tcatatagtacttcgatcacacttaatttattttaaaaaaacatgtta 45585852  T
Q  119 tatactccgtaatttt 134  Q
    |||| |||||||||||    
T  45585853 tatagtccgtaatttt 45585868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 43552066 - 43552108
Alignment:
Q  18 ttataaaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  43552066 ttatgaaatgttttttaaaaagttaacatattaacatgataaa 43552108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 60
Target Start/End: Original strand, 36285649 - 36285690
Alignment:
Q  19 tataaaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  36285649 tataaaatattttttaaaaagttaacatattaacatgataaa 36285690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 133
Target Start/End: Complemental strand, 30010497 - 30010394
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttattttnnnnnnncatgttatata 122  Q
    |||||||||||||| ||||||||||||||||| ||||| ||       |||||||||||||| | || ||||||||||||||       |||||||||||    
T  30010497 aaatgttttttaaatagttaacatattaacattataaacga-------tcatataatacttcaaccacacttaatttattttagaaaaacatgttatata 30010405  T
Q  123 ctccgtaattt 133  Q
     ||||||||||    
T  30010404 gtccgtaattt 30010394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 32951397 - 32951471
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    ||||||||| |||||||||||||||||||||||||||| ||       || ||||||||||| |||| ||||||||||||||    
T  32951397 aaatgttttataaaaagttaacatattaacatgataaacga-------tcgtataatacttcaatcacacttaatttatttt 32951471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 40095012 - 40095086
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    ||||||||| ||||||||||||| |||||||||||||| ||       |||||||||||||| |||| ||||||||||||||    
T  40095012 aaatgttttataaaaagttaacaaattaacatgataaacga-------tcatataatacttcaatcacacttaatttatttt 40095086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 104
Target Start/End: Original strand, 49946663 - 49946741
Alignment:
Q  19 tataaaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    |||||||| |||||| ||||||||||||||||||||||||||| |       |||||||||||||| |||| | ||||||||||||    
T  49946663 tataaaatatttttttaaaagttaacatattaacatgataaatta-------tcatataatacttcaatcacatttaatttatttt 49946741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 103
Target Start/End: Complemental strand, 8529964 - 8529891
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttattt 103  Q
    |||| |||||||||||||||||||||||||||| |||| ||       |||||||||||||| |||| |||||||||||||    
T  8529964 aaatattttttaaaaagttaacatattaacatggtaaacga-------tcatataatacttcaatcacacttaatttattt 8529891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 104
Target Start/End: Original strand, 50744365 - 50744434
Alignment:
Q  28 ttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    ||||||||| ||||||||||||||||||||||| ||       |||||||||||||| |||| ||||||||||||||    
T  50744365 ttttttaaagagttaacatattaacatgataaacga-------tcatataatacttcaatcacacttaatttatttt 50744434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 7444664 - 7444623
Alignment:
Q  19 tataaaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    ||||||||| |||||||||||||||||||||||||| |||||    
T  7444664 tataaaatgatttttaaaaagttaacatattaacataataaa 7444623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 10392045 - 10392000
Alignment:
Q  16 cattataaaatgtttttt-aaaaagttaacatattaacatgataaa 60  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||    
T  10392045 cattattaaatgtttttttaaaaagttaacatattaacatgataaa 10392000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 35349541 - 35349578
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  35349541 aaatgttttataaaaagttaacatattaacatgataaa 35349578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 41498569 - 41498532
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  41498569 aaatgttttataaaaagttaacatattaacatgataaa 41498532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 28770895 - 28770852
Alignment:
Q  16 cattataaaatgttttttaaaaagttaacatattaacatgataa 59  Q
    |||||| ||||||||| |||||| ||||||||||||||||||||    
T  28770895 cattatgaaatgttttataaaaaattaacatattaacatgataa 28770852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 104
Target Start/End: Complemental strand, 42230707 - 42230629
Alignment:
Q  19 tataaaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    |||||||||||||||| |||||||| |||||||||| |||||  |       |||||||||||||| |||| ||||||||||||||    
T  42230707 tataaaatgttttttataaagttaaaatattaacataataaacaa-------tcatataatacttcaatcacacttaatttatttt 42230629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 51597833 - 51597759
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    ||||| ||||||||||||||||||||||| ||||||||  |       |||||||||||||| |||| ||||||||||||||    
T  51597833 aaatggtttttaaaaagttaacatattaagatgataaacaa-------tcatataatacttcaatcacacttaatttatttt 51597759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 71 - 133
Target Start/End: Original strand, 2859052 - 2859114
Alignment:
Q  71 tcatataatacttctatcatacttaatttattttnnnnnnncatgttatatactccgtaattt 133  Q
    |||||||||||||| |||| ||||||||||||||       ||||||||||| ||||||||||    
T  2859052 tcatataatacttcaatcacacttaatttatttttgaaaaacatgttatatagtccgtaattt 2859114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 20576210 - 20576247
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  20576210 aaatgttttttaaagagttaatatattaacatgataaa 20576247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 44211014 - 44211058
Alignment:
Q  60 atgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    |||||||| | |||||||||||||| |||| ||||||||||||||    
T  44211014 atgataaacgatcatataatacttcaatcacacttaatttatttt 44211058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 5e-16; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 4097591 - 4097665
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    |||||||||||||||||||||||||||||||||||||| ||       |||||||||||||| |||| ||||||||||||||    
T  4097591 aaatgttttttaaaaagttaacatattaacatgataaacga-------tcatataatacttcaatcacacttaatttatttt 4097665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 33041627 - 33041589
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaat 61  Q
    |||||||||||||||||||||||||||||||||||||||    
T  33041627 aaatgttttttaaaaagttaacatattaacatgataaat 33041589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 1390484 - 1390443
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgat 64  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  1390484 aaatattttttaaaaagttaacatattaacatgataaatgat 1390443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 64
Target Start/End: Complemental strand, 10818381 - 10818340
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgat 64  Q
    |||||||||||||||  |||||||||||||||||||||||||    
T  10818381 aaatgttttttaaaatattaacatattaacatgataaatgat 10818340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 21606923 - 21606960
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  21606923 aaatgttttataaaaagttaacatattaacatgataaa 21606960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 1395800 - 1395760
Alignment:
Q  24 aatgttttttaaaaagttaacatattaacatgataaatgat 64  Q
    ||||||||||||||| ||||||||||| |||||||||||||    
T  1395800 aatgttttttaaaaaattaacatattagcatgataaatgat 1395760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 33236111 - 33236079
Alignment:
Q  28 ttttttaaaaagttaacatattaacatgataaa 60  Q
    |||||||||||||||||||||||||||||||||    
T  33236111 ttttttaaaaagttaacatattaacatgataaa 33236079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 104
Target Start/End: Complemental strand, 13583884 - 13583810
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    |||||||||||||||| ||||||| ||||||| ||||||||       |||||||||| ||| |||| ||||||||||||||    
T  13583884 aaatgttttttaaaaaattaacatgttaacataataaatga-------tcatataatatttcaatcacacttaatttatttt 13583810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 14515640 - 14515593
Alignment:
Q  19 tataaaatgttttttaaaaagttaacatattaacatgataaatgataa 66  Q
    |||||||| |||||| || ||||||||||| |||||||||||||||||    
T  14515640 tataaaatattttttgaagagttaacatatgaacatgataaatgataa 14515593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Complemental strand, 2900075 - 2900038
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    ||||||||| ||| ||||||||||||||||||||||||    
T  2900075 aaatgttttataagaagttaacatattaacatgataaa 2900038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 5585381 - 5585418
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    ||||||||||||||||| |||||||||||||| |||||    
T  5585381 aaatgttttttaaaaaggtaacatattaacataataaa 5585418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 30487384 - 30487421
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  30487384 aaatgtcttttaaaaagtcaacatattaacatgataaa 30487421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 31849279 - 31849238
Alignment:
Q  19 tataaaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    |||||||||| ||||||||| ||||||||||||| |||||||    
T  31849279 tataaaatgtcttttaaaaaattaacatattaacgtgataaa 31849238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 665913 - 665961
Alignment:
Q  17 attataaaatgttttttaaaaagtt-aacatattaacatgataaatgat 64  Q
    ||||| |||||| ||||||||| || |||||||||||||||||||||||    
T  665913 attatgaaatgtcttttaaaaattttaacatattaacatgataaatgat 665961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 9719111 - 9719147
Alignment:
Q  24 aatgttttttaaaaagttaacatattaacatgataaa 60  Q
    ||||||||||||||||||||||||||||  |||||||    
T  9719111 aatgttttttaaaaagttaacatattaatttgataaa 9719147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 9721218 - 9721254
Alignment:
Q  24 aatgttttttaaaaagttaacatattaacatgataaa 60  Q
    ||||||||||||||||||||||||||||  |||||||    
T  9721218 aatgttttttaaaaagttaacatattaatttgataaa 9721254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 39266 - 39307
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgat 64  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  39266 aaatgttttttaaaaagttaacatattaacatgataaatgat 39307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 21)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 11575485 - 11575559
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    |||||||||||||||||||||||||||||||||||||| ||       |||||||||||||  |||| ||||||||||||||    
T  11575485 aaatgttttttaaaaagttaacatattaacatgataaacga-------tcatataatactttaatcacacttaatttatttt 11575559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 15 - 133
Target Start/End: Original strand, 42650404 - 42650518
Alignment:
Q  15 tcattataaaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttattttnnnnnnncat 114  Q
    ||||||| ||||||||| ||||||||||||||||     | ||| ||||||||   |||||||||||||| |||| ||||||||||||||       |||    
T  42650404 tcattatgaaatgttttataaaaagttaacatatg----ttatacatgataaacaatcatataatacttcaatcacacttaatttattttagaaaaacat 42650499  T
Q  115 gttatatactccgtaattt 133  Q
    |||||||| ||||||||||    
T  42650500 gttatatattccgtaattt 42650518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 35 - 104
Target Start/End: Original strand, 1026940 - 1027002
Alignment:
Q  35 aaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    |||||||||||||||||||||||||| |||       ||||||||||||| |||||||||||||||||||    
T  1026940 aaaagttaacatattaacatgataaacgat-------catataatacttcaatcatacttaatttatttt 1027002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 31543151 - 31543225
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    |||||||||| |||||||||||||||||||       || ||||| |||||||||||||||| |||| ||||||||||||||    
T  31543151 aaatgtttttaaaaaagttaacatattaac-------atcataaacggtcatataatacttcaatcacacttaatttatttt 31543225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 16653121 - 16653011
Alignment:
Q  16 cattataaaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttattttnnnnnnncatg 115  Q
    |||||| |||||||||| ||||||||||||||||||||  ||||| ||       |||||||||||||| |||| |||| |||||||||       ||||    
T  16653121 cattatgaaatgtttttgaaaaagttaacatattaacaaaataaacga-------tcatataatacttcaatcacacttgatttattttataaaaacatg 16653029  T
Q  116 ttatatactccgtaattt 133  Q
    ||||||| ||||||||||    
T  16653028 ttatatagtccgtaattt 16653011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 16 - 104
Target Start/End: Complemental strand, 30664533 - 30664452
Alignment:
Q  16 cattataaaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    ||||| ||||| |||||||||||||||||||||||       | |||||||| ||| |||||||||||| |||| ||||||||||||||    
T  30664533 cattacaaaatattttttaaaaagttaacatatta-------atatgataaacggttatataatacttcaatcacacttaatttatttt 30664452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 133
Target Start/End: Original strand, 40990268 - 40990366
Alignment:
Q  28 ttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttattttnnnnnnncatgttatatactccg 127  Q
    ||||||||| ||||||||||||||||||||||  |||       ||||||||||||| |||| ||||||||||||||       ||||||||||| ||||    
T  40990268 ttttttaaagagttaacatattaacatgataagcgat-------catataatacttcaatcagacttaatttattttaaagaaacatgttatatagtccg 40990360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 4247594 - 4247670
Alignment:
Q  21 taaaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    |||||| |||||||| |||||||||||||| ||||||||| |||       ||||||||||||  |||||||||||||||||||    
T  4247594 taaaatattttttaagaagttaacatattagcatgataaacgat-------catataatacttaaatcatacttaatttatttt 4247670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 7503033 - 7503070
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  7503033 aaatgttttataaaaagttaacatattaacatgataaa 7503070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 64
Target Start/End: Complemental strand, 31738592 - 31738547
Alignment:
Q  19 tataaaatgttttttaaaaagttaacatattaacatgataaatgat 64  Q
    |||||||| |||||| || |||||||||||||||||||||||||||    
T  31738592 tataaaatattttttgaagagttaacatattaacatgataaatgat 31738547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 37923157 - 37923198
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgat 64  Q
    |||||||||||||| |||||| ||||||||||||||||||||    
T  37923157 aaatgttttttaaagagttaaaatattaacatgataaatgat 37923198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 11785698 - 11785654
Alignment:
Q  16 cattataaaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    |||||| |||| ||||||||||||||| |||||||||||||||||    
T  11785698 cattatgaaatattttttaaaaagttagcatattaacatgataaa 11785654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 66
Target Start/End: Complemental strand, 1281308 - 1281265
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataa 66  Q
    |||| ||||||||||||||||||||||||||| ||||| |||||    
T  1281308 aaatattttttaaaaagttaacatattaacataataaacgataa 1281265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 30479796 - 30479839
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataa 66  Q
    |||||| ||||||||||||||||||||||  |||||||||||||    
T  30479796 aaatgtcttttaaaaagttaacatattaaggtgataaatgataa 30479839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 26 - 60
Target Start/End: Complemental strand, 37032541 - 37032507
Alignment:
Q  26 tgttttttaaaaagttaacatattaacatgataaa 60  Q
    |||||||||||||||||||||||||| ||||||||    
T  37032541 tgttttttaaaaagttaacatattaagatgataaa 37032507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 9718558 - 9718595
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  9718558 aaatggtttttaaaaagttagcatattaacatgataaa 9718595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 60
Target Start/End: Original strand, 29691001 - 29691038
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaa 60  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  29691001 aaatatttttaaaaaagttaacatattaacatgataaa 29691038  T

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Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 3726964 - 3727008
Alignment:
Q  60 atgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    |||||||| |||||||||||| ||| ||||| |||||||||||||    
T  3726964 atgataaacggtcatataatatttcaatcatgcttaatttatttt 3727008  T

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Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 11033577 - 11033545
Alignment:
Q  28 ttttttaaaaagttaacatattaacatgataaa 60  Q
    ||||||||||| |||||||||||||||||||||    
T  11033577 ttttttaaaaaattaacatattaacatgataaa 11033545  T

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Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 28 - 60
Target Start/End: Complemental strand, 33922680 - 33922648
Alignment:
Q  28 ttttttaaaaagttaacatattaacatgataaa 60  Q
    ||||||||||||||||||||||| |||||||||    
T  33922680 ttttttaaaaagttaacatattatcatgataaa 33922648  T

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Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 41103615 - 41103659
Alignment:
Q  60 atgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    |||||||| | |||||||||||||| |||| ||||||||||||||    
T  41103615 atgataaacgatcatataatacttcaatcacacttaatttatttt 41103659  T

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Target: scaffold0262 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 16375 - 16449
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    ||||||||| ||||| ||||||||||||||||||||||  |       |||||||||||||| |||| ||||||||||||||    
T  16375 aaatgttttataaaacgttaacatattaacatgataaacaa-------tcatataatacttcaatcacacttaatttatttt 16449  T

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Target: scaffold0171 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 56
Target Start/End: Complemental strand, 16121 - 16082
Alignment:
Q  17 attataaaatgttttttaaaaagttaacatattaacatga 56  Q
    ||||| ||||||||||||||||||||||||||||| ||||    
T  16121 attatgaaatgttttttaaaaagttaacatattaatatga 16082  T

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Target: scaffold0026 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 1337 - 1264
Alignment:
Q  23 aaatgttttttaaaaagttaacatattaacatgataaatgataaaaggtcatataatacttctatcatacttaattt 99  Q
    |||||||||||||||||||||||||||  ||||||||| ||| | |    ||||||||||||  |||||||||||||    
T  1337 aaatgttttttaaaaagttaacatattgtcatgataaacgatcata---tatataatacttcagtcatacttaattt 1264  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 60 - 104
Target Start/End: Original strand, 81520 - 81564
Alignment:
Q  60 atgataaaaggtcatataatacttctatcatacttaatttatttt 104  Q
    |||||||| | |||||||||||||| ||||||||| |||||||||    
T  81520 atgataaatgatcatataatacttcaatcatacttgatttatttt 81564  T

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