View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2686_low_4 (Length: 530)
Name: NF2686_low_4
Description: NF2686
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2686_low_4 |
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Alignment Details
Target: chr1 (Bit Score: 258; Significance: 1e-143; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 208 - 473
Target Start/End: Original strand, 43086817 - 43087082
Alignment:
| Q |
208 |
gaattgttataaactctttacttgctgtagttttactttatattcaacttatataaaacatgaaatcaaatttcaagggctgggtacaaacaaacaagat |
307 |
Q |
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| T |
43086817 |
gaattgttataaactctttacttgctgtagttttactttatattcaacttatataaaacatgaaatcaaatctcaagggctgggtacaaacaaacaagat |
43086916 |
T |
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| Q |
308 |
gtgcacttttatctcattgttgtaccaacaaattacaagatgtgcactttttagatattcaggcttaaatattagtatatgtaatttccatttctcaaaa |
407 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
43086917 |
gtgcacttttatctcattgttgtaccaacaaattacaagatgtgcactttttagatattcaggcttaaatattagtatatgtaacttccatttctcaaaa |
43087016 |
T |
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| Q |
408 |
tgcaccgagtgatttccaagaagtttaccacaaaaaaatcaactaataaaacaccatctcttgttg |
473 |
Q |
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| T |
43087017 |
tgcaccgagtgatttccaagaagtttaccacaaaaaaatcaactaataaaacaccatctcttgttg |
43087082 |
T |
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