View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2687_low_29 (Length: 454)

Name: NF2687_low_29
Description: NF2687
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2687_low_29
NF2687_low_29
[»] chr1 (23 HSPs)
chr1 (18-428)||(27523683-27524095)
chr1 (131-209)||(14625369-14625448)
chr1 (131-190)||(14978310-14978368)
chr1 (129-177)||(43635832-43635880)
chr1 (134-209)||(2273503-2273578)
chr1 (391-428)||(27524168-27524205)
chr1 (132-190)||(25601916-25601975)
chr1 (131-177)||(24545456-24545502)
chr1 (131-177)||(26097039-26097085)
chr1 (131-177)||(47221950-47221996)
chr1 (133-195)||(50104540-50104602)
chr1 (129-182)||(22591277-22591330)
chr1 (129-177)||(32130641-32130690)
chr1 (131-223)||(37194454-37194547)
chr1 (259-292)||(42825655-42825688)
chr1 (133-189)||(6225366-6225422)
chr1 (129-173)||(8928812-8928856)
chr1 (132-200)||(9043448-9043516)
chr1 (133-177)||(13902066-13902110)
chr1 (131-209)||(14626757-14626837)
chr1 (129-177)||(16785719-16785767)
chr1 (130-177)||(23321261-23321309)
chr1 (129-173)||(44311205-44311249)
[»] chr3 (17 HSPs)
chr3 (127-212)||(28206977-28207062)
chr3 (133-209)||(10615276-10615353)
chr3 (129-177)||(46597520-46597568)
chr3 (131-209)||(11359456-11359535)
chr3 (129-223)||(28208110-28208205)
chr3 (132-209)||(46610009-46610087)
chr3 (133-209)||(31293749-31293825)
chr3 (130-209)||(2305483-2305562)
chr3 (132-209)||(11360326-11360405)
chr3 (130-173)||(15093730-15093773)
chr3 (122-207)||(18704943-18705030)
chr3 (132-190)||(54567741-54567800)
chr3 (131-177)||(18140939-18140985)
chr3 (131-177)||(18142209-18142255)
chr3 (131-177)||(37977518-37977564)
chr3 (133-200)||(29313789-29313857)
chr3 (129-189)||(31341441-31341501)
[»] chr8 (14 HSPs)
chr8 (133-209)||(27164637-27164714)
chr8 (129-205)||(28575095-28575172)
chr8 (133-189)||(28561435-28561491)
chr8 (133-189)||(28566933-28566989)
chr8 (131-200)||(27987296-27987365)
chr8 (131-200)||(28044598-28044667)
chr8 (123-206)||(39682990-39683075)
chr8 (128-209)||(39810065-39810148)
chr8 (128-177)||(31985007-31985057)
chr8 (126-190)||(1600071-1600136)
chr8 (120-209)||(30222067-30222156)
chr8 (128-177)||(39515134-39515183)
chr8 (132-177)||(39808649-39808693)
chr8 (130-190)||(5873685-5873745)
[»] chr7 (15 HSPs)
chr7 (131-206)||(1831962-1832037)
chr7 (127-209)||(17763331-17763415)
chr7 (131-177)||(9553399-9553445)
chr7 (258-311)||(1675826-1675879)
chr7 (124-200)||(23371440-23371517)
chr7 (132-200)||(48104717-48104785)
chr7 (129-223)||(1830809-1830904)
chr7 (134-177)||(48896481-48896524)
chr7 (131-177)||(1594136-1594182)
chr7 (130-200)||(16902326-16902395)
chr7 (131-177)||(21237357-21237403)
chr7 (132-190)||(42202161-42202219)
chr7 (131-177)||(48168849-48168895)
chr7 (131-200)||(23784583-23784652)
chr7 (130-182)||(24845636-24845688)
[»] chr5 (17 HSPs)
chr5 (132-209)||(30796579-30796657)
chr5 (129-209)||(41064141-41064223)
chr5 (129-190)||(11439796-11439857)
chr5 (130-209)||(11957627-11957708)
chr5 (133-177)||(13948594-13948638)
chr5 (130-209)||(15615101-15615181)
chr5 (130-177)||(15061835-15061882)
chr5 (125-209)||(21776885-21776971)
chr5 (131-209)||(11956138-11956218)
chr5 (131-209)||(15060162-15060242)
chr5 (123-182)||(15395535-15395594)
chr5 (258-332)||(15051323-15051397)
chr5 (131-207)||(41065637-41065715)
chr5 (129-209)||(11438336-11438417)
chr5 (125-209)||(30798557-30798642)
chr5 (132-177)||(37274748-37274793)
chr5 (133-177)||(28819537-28819581)
[»] chr4 (16 HSPs)
chr4 (131-177)||(43860925-43860971)
chr4 (131-209)||(20962193-20962272)
chr4 (129-209)||(34741372-34741454)
chr4 (131-177)||(54554382-54554428)
chr4 (131-200)||(21780121-21780190)
chr4 (132-177)||(41332750-41332795)
chr4 (133-200)||(17289964-17290032)
chr4 (132-209)||(20963678-20963757)
chr4 (130-177)||(50879907-50879954)
chr4 (134-177)||(51164032-51164075)
chr4 (131-177)||(29248241-29248287)
chr4 (131-177)||(50881434-50881480)
chr4 (132-177)||(34027206-34027251)
chr4 (129-177)||(11861900-11861948)
chr4 (134-189)||(12352458-12352514)
chr4 (130-177)||(34739886-34739934)
[»] chr2 (17 HSPs)
chr2 (130-209)||(1902928-1903009)
chr2 (130-190)||(38937506-38937567)
chr2 (133-200)||(22535672-22535739)
chr2 (130-223)||(38876986-38877080)
chr2 (133-209)||(16670500-16670577)
chr2 (131-209)||(7577755-7577835)
chr2 (127-177)||(1904420-1904471)
chr2 (132-209)||(7576325-7576404)
chr2 (130-200)||(30371383-30371454)
chr2 (132-209)||(44366867-44366946)
chr2 (131-177)||(19686191-19686237)
chr2 (131-177)||(23835784-23835830)
chr2 (131-200)||(17328314-17328383)
chr2 (129-182)||(31551525-31551578)
chr2 (131-164)||(34428890-34428923)
chr2 (127-176)||(41305876-41305924)
chr2 (132-177)||(44242367-44242412)
[»] chr6 (13 HSPs)
chr6 (129-177)||(34762179-34762227)
chr6 (130-189)||(3120334-3120393)
chr6 (129-183)||(30409675-30409729)
chr6 (130-173)||(56128-56171)
chr6 (129-184)||(6000676-6000731)
chr6 (132-209)||(22056482-22056561)
chr6 (131-177)||(3063495-3063541)
chr6 (130-184)||(5999715-5999769)
chr6 (132-177)||(14328658-14328703)
chr6 (132-177)||(14421668-14421713)
chr6 (130-195)||(22365832-22365897)
chr6 (131-206)||(24235612-24235689)
chr6 (131-209)||(18983983-18984063)
[»] scaffold0136 (1 HSPs)
scaffold0136 (128-177)||(35595-35644)
[»] scaffold0466 (1 HSPs)
scaffold0466 (399-430)||(5383-5414)
[»] scaffold0450 (1 HSPs)
scaffold0450 (129-200)||(7856-7927)
[»] scaffold0176 (1 HSPs)
scaffold0176 (129-209)||(265-348)
[»] scaffold0250 (1 HSPs)
scaffold0250 (131-177)||(10079-10125)
[»] scaffold0210 (2 HSPs)
scaffold0210 (132-177)||(5907-5953)
scaffold0210 (129-177)||(4704-4753)
[»] scaffold0014 (1 HSPs)
scaffold0014 (128-177)||(227365-227415)
[»] scaffold0804 (1 HSPs)
scaffold0804 (131-209)||(2732-2812)
[»] scaffold0384 (1 HSPs)
scaffold0384 (122-182)||(4434-4494)


Alignment Details
Target: chr1 (Bit Score: 299; Significance: 1e-168; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 299; E-Value: 1e-168
Query Start/End: Original strand, 18 - 428
Target Start/End: Original strand, 27523683 - 27524095
Alignment:
Q  18 agttagaacctttgtattcacacatctttgcaactttgcaatcattaacttagttactagtaggaattggtcttaaattgtctaattatt-gccacaatt 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  27523683 agttagaacctttgtattcacacatctttgcaactttgcaatcattaacttagttactagtaggaattggtcttaaattgtctaattcttagccacaatt 27523782  T
Q  117 tcttcattttaattagggttaataggactttacctcctataatatagggcacttttggtttcccccctataaaacttttattttagattccgttgttgca 216  Q
    ||||||||||||||| ||||||||||||||||||   ||||||||||||||||||||||||||||| | ||||  |||||||||||||||||||||||||    
T  27523783 tcttcattttaattaaggttaataggactttaccctgtataatatagggcacttttggtttccccc-tgtaaat-ttttattttagattccgttgttgca 27523880  T
Q  217 aaataaannnnnnncaagattaccccctgaacccttgtgcaattatagtggaaaaatctctcaagtgtgaggggactggacttaatccaagattttggac 316  Q
    |||||||       ||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  27523881 aaataaaaattcttcaagattgccccttgagcccttgtgcaattatagtggaaaaatctctcaagtgtgaggggactggacttaatccaagattttggat 27523980  T
Q  317 tgaattaggataaatacatgcgtcgttctcctctccatt--tctctttatctttagcaga-tctagtttttaatctataaaatgattttcagaaaaaggc 413  Q
    ||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  27523981 tgaatcaggataaatacatgcgtcgttctcctctccatttctctctttatctttagcagactctagtttttaatctataaaatgatttttagaaaaaggc 27524080  T
Q  414 aacacaattcaactc 428  Q
    |||||||||||||||    
T  27524081 aacacaattcaactc 27524095  T

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Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 14625369 - 14625448
Alignment:
Q  131 agggttaataggactttacctcctataatatagggcacttttgg-tttcccccctataaaacttttattttagattccgt 209  Q
    |||||||||||| ||||||| ||| ||||||||| ||||||||| ||| |||||| ||||| |||| |||||||||||||    
T  14625369 agggttaataggtctttaccccctgtaatataggacacttttggttttgccccctgtaaaattttttttttagattccgt 14625448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 190
Target Start/End: Original strand, 14978310 - 14978368
Alignment:
Q  131 agggttaataggactttacctcctataatatagggcacttttggtttcccccctataaaa 190  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||  |||||||||||    
T  14978310 agggttaataggtctttacctc-tataatatagggcacttttggtttttcccctataaaa 14978368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 43635832 - 43635880
Alignment:
Q  129 ttagggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    |||||||||||||| ||||||| ||| ||||||||||||||||||||||    
T  43635832 ttagggttaataggtctttaccccctgtaatatagggcacttttggttt 43635880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 134 - 209
Target Start/End: Original strand, 2273503 - 2273578
Alignment:
Q  134 gttaataggactttacctcctataatatagggcacttttggtttcccccctataaaacttttattttagattccgt 209  Q
    ||||||||| ||||||| ||| ||||||||||||||||| |||| ||| || ||||  |||| |||||||||||||    
T  2273503 gttaataggtctttaccccctgtaatatagggcactttttgtttgccctctgtaaatttttttttttagattccgt 2273578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 391 - 428
Target Start/End: Complemental strand, 27524205 - 27524168
Alignment:
Q  391 taaaatgattttcagaaaaaggcaacacaattcaactc 428  Q
    |||||||||||| |||||||||||||||||||||||||    
T  27524205 taaaatgatttttagaaaaaggcaacacaattcaactc 27524168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 190
Target Start/End: Complemental strand, 25601975 - 25601916
Alignment:
Q  132 gggttaataggactttacctcctataatatagggcacttttgg-tttcccccctataaaa 190  Q
    ||||||||||| ||||||| |||  |||||||| ||||||||| ||||||||||||||||    
T  25601975 gggttaataggcctttaccccctgcaatataggtcacttttggttttcccccctataaaa 25601916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 24545456 - 24545502
Alignment:
Q  131 agggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    ||||||||||||  |||||| ||||||||||||| ||||||||||||    
T  24545456 agggttaataggcttttaccccctataatataggtcacttttggttt 24545502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 26097085 - 26097039
Alignment:
Q  131 agggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    |||||||||||| ||||||| ||| ||||||||| ||||||||||||    
T  26097085 agggttaataggtctttaccccctgtaatataggtcacttttggttt 26097039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 47221996 - 47221950
Alignment:
Q  131 agggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    |||||||||||| |||||||||||  |||||||| ||||||||||||    
T  47221996 agggttaataggtctttacctcctgcaatataggtcacttttggttt 47221950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 195
Target Start/End: Original strand, 50104540 - 50104602
Alignment:
Q  133 ggttaataggactttacctcctataatatagggcacttttggtttcccccctataaaactttt 195  Q
    |||||||||| ||||||  ||| ||| ||||| |||||||||||| |||||||||||| ||||    
T  50104540 ggttaataggcctttacgccctgtaacataggtcacttttggttttccccctataaaattttt 50104602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 22591277 - 22591330
Alignment:
Q  129 ttagggttaataggactttacctcctataatatagggcacttttggtttccccc 182  Q
    |||||||||||||| ||||||| | | ||||||||| |||||||||||| ||||    
T  22591277 ttagggttaataggcctttaccccttgtaatataggtcacttttggttttcccc 22591330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 32130641 - 32130690
Alignment:
Q  129 ttagggttaataggactttacctccta-taatatagggcacttttggttt 177  Q
    |||||||||||||| ||||||| |||| ||||||||| ||||||||||||    
T  32130641 ttagggttaataggcctttaccccctagtaatataggtcacttttggttt 32130690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 223
Target Start/End: Complemental strand, 37194547 - 37194454
Alignment:
Q  131 agggttaataggactttacctcctataatatagggcacttttgg-tttcccccctataaaacttttattttagattccgttgttgcaaaataaa 223  Q
    ||||||||||| |||||||  ||| ||||||||| || |||||| ||| |||||| ||||  |||| |||||||||||||  ||| ||||||||    
T  37194547 agggttaatagaactttactccctgtaatataggacatttttggtttttccccctctaaatttttttttttagattccgtccttgtaaaataaa 37194454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 292
Target Start/End: Original strand, 42825655 - 42825688
Alignment:
Q  259 ttatagtggaaaaatctctcaagtgtgaggggac 292  Q
    |||||||||||||||||||||| |||||||||||    
T  42825655 ttatagtggaaaaatctctcaaatgtgaggggac 42825688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 189
Target Start/End: Complemental strand, 6225422 - 6225366
Alignment:
Q  133 ggttaataggactttacctcctataatatagggcacttttggtttcccccctataaa 189  Q
    |||||||||| |||||| ||||  |||||||| |||||||||||| |||||| ||||    
T  6225422 ggttaataggtctttacttcctgcaatataggtcacttttggttttccccctgtaaa 6225366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 173
Target Start/End: Original strand, 8928812 - 8928856
Alignment:
Q  129 ttagggttaataggactttacctcctataatatagggcacttttg 173  Q
    |||||||||||||| ||||||| ||| ||||||| ||||||||||    
T  8928812 ttagggttaataggtctttaccccctgtaatataaggcacttttg 8928856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 132 - 200
Target Start/End: Original strand, 9043448 - 9043516
Alignment:
Q  132 gggttaataggactttacctcctataatatagggcacttttggtttcccccctataaaacttttatttt 200  Q
    ||||||||||| |||||||| |||||||||| | || ||| |||||  ||||| ||||| |||||||||    
T  9043448 gggttaataggtctttacctgctataatatatgtcattttcggtttttcccctgtaaaatttttatttt 9043516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 13902066 - 13902110
Alignment:
Q  133 ggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    |||||||||| ||||||| ||| |||||||||||| |||||||||    
T  13902066 ggttaataggtctttaccacctgtaatatagggcagttttggttt 13902110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 14626837 - 14626757
Alignment:
Q  131 agggttaataggactttac-ctcctataatatagggcacttttgg-tttcccccctataaaacttttattttagattccgt 209  Q
    |||||||||||| |||||| | ||| ||||||||||||||||||| ||| || ||| ||||  |||| |||||||||||||    
T  14626837 agggttaataggtctttactcccctgtaatatagggcacttttggttttgcctcctgtaaatttttttttttagattccgt 14626757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 16785719 - 16785767
Alignment:
Q  129 ttagggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    |||||||||||||| ||||||| ||| |||| |||| ||||||||||||    
T  16785719 ttagggttaataggcctttaccccctgtaatgtaggtcacttttggttt 16785767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 23321261 - 23321309
Alignment:
Q  130 tagggttaataggacttta-cctcctataatatagggcacttttggttt 177  Q
    ||||||||||||  ||||| |||||| ||||||||||||||||||||||    
T  23321261 tagggttaatagatctttatcctcctgtaatatagggcacttttggttt 23321309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 173
Target Start/End: Original strand, 44311205 - 44311249
Alignment:
Q  129 ttagggttaataggactttacctcctataatatagggcacttttg 173  Q
    |||||||||||||| ||||||| ||| ||||||||| ||||||||    
T  44311205 ttagggttaataggcctttaccccctgtaatataggacacttttg 44311249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 2e-16; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 212
Target Start/End: Original strand, 28206977 - 28207062
Alignment:
Q  127 aattagggttaataggactttacc-tcctataatatagggcacttttgg-tttcccccctataaaacttttattttagattccgttgt 212  Q
    |||||||||||||||| ||||||| |||| ||||||||||||||||||| |||||||||| ||||  |||| ||||||||||||||||    
T  28206977 aattagggttaatagggctttaccctcctgtaatatagggcacttttggttttcccccctgtaaa--tttttttttagattccgttgt 28207062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 209
Target Start/End: Original strand, 10615276 - 10615353
Alignment:
Q  133 ggttaataggactttacctcctataatatagggcacttttgg-tttcccccctataaaacttttattttagattccgt 209  Q
    |||||||||| ||||||| ||| ||||||||||||||||||| ||| |||||| ||||  |||| |||||||||||||    
T  10615276 ggttaataggtctttaccccctgtaatatagggcacttttggttttgccccctgtaaatttttttttttagattccgt 10615353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 46597568 - 46597520
Alignment:
Q  129 ttagggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    |||||||||||||| ||||||| ||| ||||||||||||||||||||||    
T  46597568 ttagggttaataggtctttaccccctgtaatatagggcacttttggttt 46597520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 11359456 - 11359535
Alignment:
Q  131 agggttaataggactttacctcctataatatagggcacttttgg-tttcccccctataaaacttttattttagattccgt 209  Q
    |||||||||||| ||||||| |||  |||||||| ||||||||| |||||||| | ||||| |||| |||||||||||||    
T  11359456 agggttaataggcctttaccccctgcaatataggtcacttttggttttcccccttgtaaaattttttttttagattccgt 11359535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 129 - 223
Target Start/End: Complemental strand, 28208205 - 28208110
Alignment:
Q  129 ttagggttaataggactttacctcc-tataatatagggcacttttggtttcccccctataaaacttttattttagattccgttgttgcaaaataaa 223  Q
    |||||||||||||  ||||||| || | |||||||||||||||||||||| |||||| |||   |||| |||||||||||||  ||| ||||||||    
T  28208205 ttagggttaatagagctttacccccctgtaatatagggcacttttggttttccccctgtaattttttttttttagattccgtccttgtaaaataaa 28208110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 46610009 - 46610087
Alignment:
Q  132 gggttaataggactttacctcctataatatagggcacttttgg-tttcccccctataaaacttttattttagattccgt 209  Q
    ||||||||||| ||||||| ||| ||||||||||||||||||| ||| |||||| |||   |||| |||||||||||||    
T  46610009 gggttaataggtctttaccccctgtaatatagggcacttttggttttgccccctgtaattttttttttttagattccgt 46610087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 209
Target Start/End: Complemental strand, 31293825 - 31293749
Alignment:
Q  133 ggttaataggactttacctcctataatatagggcacttttggtttcccccctataaaacttttattttagattccgt 209  Q
    |||||||||  ||||||| ||||||||||||| |||||| | ||| | |||||||||| |||  |||||||||||||    
T  31293825 ggttaatagtgctttaccccctataatataggacactttcgattttctccctataaaattttctttttagattccgt 31293749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 209
Target Start/End: Complemental strand, 2305562 - 2305483
Alignment:
Q  130 tagggttaataggactttacctcctataatatagggcacttttggtttcccccctataaaacttttattttagattccgt 209  Q
    ||||||||||| | ||||||| |||  |||||||| |||||||||||| |||||| ||||| |||| | | |||||||||    
T  2305562 tagggttaataagcctttaccccctgcaatataggtcacttttggttttccccctgtaaaatttttttctcagattccgt 2305483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 11360405 - 11360326
Alignment:
Q  132 gggttaataggactttacctcc-tataatatagggcacttttggttt-cccccctataaaacttttattttagattccgt 209  Q
    ||||||||||| ||||||| || |  |||||||| |||||||||||| ||||||| ||||| |||| |||||||||||||    
T  11360405 gggttaataggcctttacccccctgcaatataggtcacttttggttttcccccctgtaaaatttttcttttagattccgt 11360326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 173
Target Start/End: Complemental strand, 15093773 - 15093730
Alignment:
Q  130 tagggttaataggactttacctcctataatatagggcacttttg 173  Q
    |||||||||||| |||||||| |||||||||||||| |||||||    
T  15093773 tagggttaatagaactttaccccctataatatagggtacttttg 15093730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 207
Target Start/End: Original strand, 18704943 - 18705030
Alignment:
Q  122 attttaattagggttaataggactttacctccta-taatatagggcacttttgg-tttcccccctataaaacttttattttagattcc 207  Q
    |||||| | |||||||||||  ||||||| || | ||||||||||||||||||| |||||||||| ||||  |||| |||||||||||    
T  18704943 attttattaagggttaatagagctttaccccccagtaatatagggcacttttggttttcccccctgtaaatttttttttttagattcc 18705030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 190
Target Start/End: Complemental strand, 54567800 - 54567741
Alignment:
Q  132 gggttaataggactttacctcctataatatagggcacttttgg-tttcccccctataaaa 190  Q
    ||||||||||| ||||||| ||| ||||||||| ||||||||| ||| ||||||||||||    
T  54567800 gggttaataggtctttaccccctgtaatataggtcacttttggttttgccccctataaaa 54567741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 18140939 - 18140985
Alignment:
Q  131 agggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    |||||||||||| ||||||| ||| ||||||||| ||||||||||||    
T  18140939 agggttaataggcctttaccccctgtaatataggtcacttttggttt 18140985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 18142255 - 18142209
Alignment:
Q  131 agggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    |||||||||||| ||||||| ||| ||||||||| ||||||||||||    
T  18142255 agggttaataggcctttaccccctgtaatataggtcacttttggttt 18142209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 37977564 - 37977518
Alignment:
Q  131 agggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    |||||||||||| ||||||| ||| ||||||||| ||||||||||||    
T  37977564 agggttaataggtctttaccccctgtaatataggacacttttggttt 37977518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 200
Target Start/End: Original strand, 29313789 - 29313857
Alignment:
Q  133 ggttaataggactttacctcctataatatagggcacttttgg-tttcccccctataaaacttttatttt 200  Q
    |||||||||| ||||||||||| ||||||||| || ||| || |||| ||||| ||||| |||||||||    
T  29313789 ggttaataggtctttacctcctgtaatataggtcattttcggttttctcccctgtaaaaattttatttt 29313857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 189
Target Start/End: Complemental strand, 31341501 - 31341441
Alignment:
Q  129 ttagggttaataggactttacctcctataatatagggcacttttggtttcccccctataaa 189  Q
    ||||||||||| |  ||||||||||| ||||||||| || |||| |||| |||||||||||    
T  31341501 ttagggttaatggtgctttacctcctgtaatataggtcattttttgttttccccctataaa 31341441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 133 - 209
Target Start/End: Complemental strand, 27164714 - 27164637
Alignment:
Q  133 ggttaataggactttacctcctataatatagggcacttttgg-tttcccccctataaaacttttattttagattccgt 209  Q
    |||||||||| ||||||| ||| ||||||||||||||||||| ||| |||||| ||||| |||| |||||||||||||    
T  27164714 ggttaataggtctttaccccctgtaatatagggcacttttggttttgccccctgtaaaattttttttttagattccgt 27164637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 129 - 205
Target Start/End: Complemental strand, 28575172 - 28575095
Alignment:
Q  129 ttagggttaataggactttacctcc-tataatatagggcacttttggtttcccccctataaaacttttattttagatt 205  Q
    |||||||||||||||||||||| || | |||||||||||||||||||||| ||||||  |||  |||| |||||||||    
T  28575172 ttagggttaataggactttaccaccctgtaatatagggcacttttggttttccccctgcaaatttttttttttagatt 28575095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 28561435 - 28561491
Alignment:
Q  133 ggttaataggactttacctcctataatatagggcacttttggtttcccccctataaa 189  Q
    |||||||||  ||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  28561435 ggttaatagagctttaccccctgtaatatagggcacttttggtttcccccctgtaaa 28561491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 189
Target Start/End: Original strand, 28566933 - 28566989
Alignment:
Q  133 ggttaataggactttacctcctataatatagggcacttttggtttcccccctataaa 189  Q
    |||||||||  ||||||| ||| ||||||||||||||||||||||||||||| ||||    
T  28566933 ggttaatagagctttaccccctgtaatatagggcacttttggtttcccccctgtaaa 28566989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 27987296 - 27987365
Alignment:
Q  131 agggttaataggactttacctcctataatatagggcacttttggtttcccccctataaaacttttatttt 200  Q
    |||||||||||| ||||||| ||||||||||||| || ||| ||||| |||||| ||||  |||||||||    
T  27987296 agggttaataggtctttaccccctataatataggtcattttcggttttccccctgtaaattttttatttt 27987365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 28044598 - 28044667
Alignment:
Q  131 agggttaataggactttacctcctataatatagggcacttttggtttcccccctataaaacttttatttt 200  Q
    |||||||||||| ||||||| ||||||||||||| || ||| ||||| |||||| ||||  |||||||||    
T  28044598 agggttaataggtctttaccccctataatataggtcattttcggttttccccctgtaaattttttatttt 28044667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 123 - 206
Target Start/End: Complemental strand, 39683075 - 39682990
Alignment:
Q  123 ttttaattagggttaataggactttacc-tcctataatatagggcacttttg-gtttcccccctataaaacttttattttagattc 206  Q
    |||||||||| ||||||||  ||||||| | |||||||||||||||||||||  ||| ||||||||||||  ||| ||||||||||    
T  39683075 ttttaattagtgttaatagtgctttacccttctataatatagggcacttttgattttgccccctataaaatattttttttagattc 39682990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 209
Target Start/End: Complemental strand, 39810148 - 39810065
Alignment:
Q  128 attagggttaataggactttacctcc-tataatatagggcacttttgg-tttcccccctataaaacttttattttagattccgt 209  Q
    ||||||||||||||| ||||||| || | ||||||||||||||||||| ||| |||||| ||||   ||| |||||||||||||    
T  39810148 attagggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaaattattttttttagattccgt 39810065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 31985007 - 31985057
Alignment:
Q  128 attagggttaataggactttacct-cctataatatagggcacttttggttt 177  Q
    ||||||||||||||| |||||||| ||| ||||||||| ||||||||||||    
T  31985007 attagggttaataggtctttacctccctgtaatataggtcacttttggttt 31985057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 190
Target Start/End: Original strand, 1600071 - 1600136
Alignment:
Q  126 taattagggttaataggactttacctcctataatatagggcacttttgg-tttcccccctataaaa 190  Q
    ||||| ||||||||||| ||||||| ||| ||||||| | ||||||||| ||| ||||||||||||    
T  1600071 taattggggttaataggtctttaccccctgtaatataagccacttttggttttgccccctataaaa 1600136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 209
Target Start/End: Complemental strand, 30222156 - 30222067
Alignment:
Q  120 tcattttaattagggttaataggactttacctcctataatatagggcacttttggtttcccccctataaaacttttattttagattccgt 209  Q
    ||||||| | ||||||||||||  ||||||| ||| ||||||||| || ||| ||||| |||||| |||||  ||| |||| ||||||||    
T  30222156 tcatttttagtagggttaatagtgctttaccccctgtaatataggtcattttcggttttccccctgtaaaatattttttttggattccgt 30222067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 177
Target Start/End: Complemental strand, 39515183 - 39515134
Alignment:
Q  128 attagggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    ||||||||||||||| ||||||  ||| ||||||||| ||||||||||||    
T  39515183 attagggttaataggcctttactccctgtaatataggtcacttttggttt 39515134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 39808649 - 39808693
Alignment:
Q  132 gggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    ||||||||||| ||||||| ||| ||||||||||||||||||||||    
T  39808649 gggttaataggtctttacc-cctgtaatatagggcacttttggttt 39808693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 130 - 190
Target Start/End: Original strand, 5873685 - 5873745
Alignment:
Q  130 tagggttaataggactttacctcctataatatagggcacttttggtttcccccctataaaa 190  Q
    ||||||||||||| ||||| | |||  |||||||| |||||||||||| |||||| |||||    
T  5873685 tagggttaatagggctttaacccctgcaatataggtcacttttggttttccccctgtaaaa 5873745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 1832037 - 1831962
Alignment:
Q  131 agggttaataggactttacctcctataatatagggcacttttggtttcccccctataaaacttttattttagattc 206  Q
    |||||||||||| ||||||| ||| |||||||||||||||||| ||| |||||| ||||  |||| ||||||||||    
T  1832037 agggttaatagggctttaccccctgtaatatagggcacttttgattttccccctgtaaatttttttttttagattc 1831962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 209
Target Start/End: Original strand, 17763331 - 17763415
Alignment:
Q  127 aattagggttaataggactttacctc-ctataatatagggcacttttgg-tttcccccctataaaacttttattttagattccgt 209  Q
    |||||||||||||||| ||||||| | || ||||||||| ||||||||| ||| |||||| ||||| |||| |||||||||||||    
T  17763331 aattagggttaataggtctttacccctctgtaatataggacacttttggttttgccccctgtaaaattttttttttagattccgt 17763415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 9553399 - 9553445
Alignment:
Q  131 agggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    |||||||||||| ||||||| ||| ||||||||||||||||||||||    
T  9553399 agggttaataggtctttaccccctgtaatatagggcacttttggttt 9553445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 258 - 311
Target Start/End: Original strand, 1675826 - 1675879
Alignment:
Q  258 attatagtggaaaaatctctcaagtgtgaggggactggacttaatccaagattt 311  Q
    |||||||||||||| |||||||||||||| |||| ||||| |||||| ||||||    
T  1675826 attatagtggaaaagtctctcaagtgtgaagggattggacgtaatcccagattt 1675879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 124 - 200
Target Start/End: Original strand, 23371440 - 23371517
Alignment:
Q  124 tttaatta-gggttaataggactttacctcctataatatagggcacttttggtttcccccctataaaacttttatttt 200  Q
    |||||||| ||||||||||| ||||||| ||| ||||||||| || || |||||| |||||| ||||| |||||||||    
T  23371440 tttaattatgggttaataggtctttaccccctgtaatataggtcatttatggttttccccctgtaaaaattttatttt 23371517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 132 - 200
Target Start/End: Complemental strand, 48104785 - 48104717
Alignment:
Q  132 gggttaataggactttacctcctataatatagggcacttttggtttcccccctataaaacttttatttt 200  Q
    ||||||||||| ||||||||||| ||||||||| || ||| ||||| ||| || ||||| |||||||||    
T  48104785 gggttaataggtctttacctcctgtaatataggtcattttcggttttccctctgtaaaatttttatttt 48104717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 1830809 - 1830904
Alignment:
Q  129 ttagggttaataggactttacctcctataatatagggcacttttg-gtttcccccctataaaacttttattttagattccgttgttgcaaaataaa 223  Q
    |||||||||||||| ||||||| ||| |||||||||  |||||||  |||||||| | ||||  |||| |||||||||||||  ||| ||||||||    
T  1830809 ttagggttaatagggctttaccccctgtaatataggatacttttgattttcccccttgtaaatttttttttttagattccgtctttgtaaaataaa 1830904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 134 - 177
Target Start/End: Original strand, 48896481 - 48896524
Alignment:
Q  134 gttaataggactttacctcctataatatagggcacttttggttt 177  Q
    ||||||||| ||||||||||| ||||||||| ||||||||||||    
T  48896481 gttaataggtctttacctcctgtaatataggtcacttttggttt 48896524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 1594182 - 1594136
Alignment:
Q  131 agggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    |||||||||||| ||||||| ||| ||||||||| ||||||||||||    
T  1594182 agggttaataggtctttaccccctgtaatataggtcacttttggttt 1594136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 200
Target Start/End: Complemental strand, 16902395 - 16902326
Alignment:
Q  130 tagggttaataggactttacctcctataatatagggcacttttggtttcccccctataaaacttttatttt 200  Q
    ||||||||||||| ||||||| ||| ||||||||| || |||||||||  ||||| ||||| |||||||||    
T  16902395 tagggttaataggtctttacc-cctgtaatataggtcatttttggtttttcccctgtaaaatttttatttt 16902326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 21237403 - 21237357
Alignment:
Q  131 agggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    ||||||||||||  |||||| ||||||||||||| ||||||||||||    
T  21237403 agggttaataggcatttaccccctataatataggtcacttttggttt 21237357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 190
Target Start/End: Original strand, 42202161 - 42202219
Alignment:
Q  132 gggttaataggactttacctcctataatatagggcacttttggtttcccccctataaaa 190  Q
    ||||||||||| ||||||| |||  |||||||| |||||||| |||||||||| |||||    
T  42202161 gggttaataggtctttaccccctgcaatataggtcacttttgatttcccccctgtaaaa 42202219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 48168849 - 48168895
Alignment:
Q  131 agggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    |||||||||||| |||||||  || ||||||||||||||||||||||    
T  48168849 agggttaataggtctttaccctctgtaatatagggcacttttggttt 48168895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 23784583 - 23784652
Alignment:
Q  131 agggttaataggactttacctcctataatatagggcacttttggtttcccccctataaaacttttatttt 200  Q
    |||||||||||| ||||||| ||| ||||||||| || |  |||||| |||||| ||||| |||||||||    
T  23784583 agggttaataggtctttaccccctgtaatataggtcattactggttttccccctgtaaaaattttatttt 23784652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 130 - 182
Target Start/End: Original strand, 24845636 - 24845688
Alignment:
Q  130 tagggttaataggactttacctcctataatatagggcacttttggtttccccc 182  Q
    ||||||||||||| ||||||||||| ||||||||| || ||| ||||| ||||    
T  24845636 tagggttaataggtctttacctcctgtaatataggtcattttcggttttcccc 24845688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 30796579 - 30796657
Alignment:
Q  132 gggttaataggactttacctcctataatatagggcacttttgg-tttcccccctataaaacttttattttagattccgt 209  Q
    ||||||||||| ||||||| ||||||||||||||||||||||| ||| |||| | ||||  |||| |||||||||||||    
T  30796579 gggttaataggtctttaccccctataatatagggcacttttggttttgccccttgtaaatttttttttttagattccgt 30796657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 41064141 - 41064223
Alignment:
Q  129 ttagggttaataggactttacctcc-tataatatagggcacttttgg-tttcccccctataaaacttttattttagattccgt 209  Q
    |||||||||||||| ||||||| || | ||||||||||||||||||| ||| |||||| ||||| |||| |||||||||||||    
T  41064141 ttagggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaaaattttttttttagattccgt 41064223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 11439857 - 11439796
Alignment:
Q  129 ttagggttaataggactttacctcctataatatagggcacttttggtttcccccctataaaa 190  Q
    |||||||||||||| ||||| ||||| |||||||| |||||||||||||  |||||||||||    
T  11439857 ttagggttaataggtctttatctcctgtaatatagagcacttttggttttgcccctataaaa 11439796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 130 - 209
Target Start/End: Complemental strand, 11957708 - 11957627
Alignment:
Q  130 tagggttaataggactttacctcc-tataatatagggcacttttgg-tttcccccctataaaacttttattttagattccgt 209  Q
    ||||||||||||| ||||||| || | ||||||||||||||||||| ||| |||||| ||||| |||| |||||||||||||    
T  11957708 tagggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaaaattttttttttagattccgt 11957627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 133 - 177
Target Start/End: Complemental strand, 13948638 - 13948594
Alignment:
Q  133 ggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||    
T  13948638 ggttaataggcctttacctcctgtaatatagggcacttttggttt 13948594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 130 - 209
Target Start/End: Original strand, 15615101 - 15615181
Alignment:
Q  130 tagggttaataggactttacctcctataatatagggcacttttgg-tttcccccctataaaacttttattttagattccgt 209  Q
    ||||||||||||| ||||||| ||| ||||||||||||||||||| |||  ||||  ||||| |||| |||||||||||||    
T  15615101 tagggttaataggtctttaccccctgtaatatagggcacttttggttttgtccccggtaaaattttttttttagattccgt 15615181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 177
Target Start/End: Complemental strand, 15061882 - 15061835
Alignment:
Q  130 tagggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    ||||||||||||| ||||||| ||| ||||||||||||||||||||||    
T  15061882 tagggttaataggtctttaccccctgtaatatagggcacttttggttt 15061835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 125 - 209
Target Start/End: Complemental strand, 21776971 - 21776885
Alignment:
Q  125 ttaattagggttaataggactttacctc-ctataatatagggcacttttgg-tttcccccctataaaacttttattttagattccgt 209  Q
    |||||| ||||||||||| ||||||| | || ||||||||||||||||||| ||| |||||| ||||  |||| |||||||||||||    
T  21776971 ttaatttgggttaataggtctttacccctctgtaatatagggcacttttggttttgccccctgtaaatttttttttttagattccgt 21776885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 11956138 - 11956218
Alignment:
Q  131 agggttaataggactttacctcc-tataatatagggcacttttgg-tttcccccctataaaacttttattttagattccgt 209  Q
    |||||||||||| ||||||| || | ||||||||||||||||||| |||  ||||| ||||| |||| |||||||||||||    
T  11956138 agggttaataggtctttacccccctgtaatatagggcacttttggttttggcccctgtaaaattttttttttagattccgt 11956218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 15060162 - 15060242
Alignment:
Q  131 agggttaataggactttacctcc-tataatatagggcacttttggtttc-ccccctataaaacttttattttagattccgt 209  Q
    |||||||||||| ||||||| || | ||||||||| ||||||||||||  |||||| ||||| |||| |||||||||||||    
T  15060162 agggttaataggtctttacccccctgtaatataggacacttttggttttgccccctgtaaaaatttttttttagattccgt 15060242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 182
Target Start/End: Original strand, 15395535 - 15395594
Alignment:
Q  123 ttttaattagggttaataggactttacctcctataatatagggcacttttggtttccccc 182  Q
    ||||| ||||||||||||||  |||||| ||| ||| ||||| |||||||||||||||||    
T  15395535 ttttatttagggttaataggtttttaccccctgtaaaataggtcacttttggtttccccc 15395594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 258 - 332
Target Start/End: Complemental strand, 15051397 - 15051323
Alignment:
Q  258 attatagtggaaaaatctctcaagtgtgaggggactggacttaatccaagattttggactgaattaggataaata 332  Q
    |||| ||| ||||| |||||||||||||||| || ||||| |||||| ||||| |||  |||| |||||||||||    
T  15051397 attaaagttgaaaagtctctcaagtgtgaggagattggacgtaatcccagattgtggggtgaactaggataaata 15051323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 207
Target Start/End: Complemental strand, 41065715 - 41065637
Alignment:
Q  131 agggttaataggactttacctcc-tataatatagggcacttttgg-tttcccccctataaaacttttattttagattcc 207  Q
    |||||||||||| ||||||| || | ||||||||||||||||||| |||  ||||| ||||| |||| |||||||||||    
T  41065715 agggttaataggtctttacccccctgtaatatagggcacttttggttttggcccctgtaaaattttttttttagattcc 41065637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 209
Target Start/End: Original strand, 11438336 - 11438417
Alignment:
Q  129 ttagggttaataggactttacctcctataatatagggcacttttgg-tttcccccctataaaacttttattttagattccgt 209  Q
    |||||||||||||  ||||||| ||| |||||||||| |||||||| ||| | |||| ||||  |||| |||||||||||||    
T  11438336 ttagggttaatagagctttaccccctgtaatatagggtacttttggttttgctccctgtaaatttttttttttagattccgt 11438417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 209
Target Start/End: Complemental strand, 30798642 - 30798557
Alignment:
Q  125 ttaattagggttaataggactttacctcctataatatagggcacttttg-gtttcccccctataaaacttttattttagattccgt 209  Q
    |||||||||||||||||| ||||||| ||  |||||||||||||| |||  ||| |||||| |||   |||| |||||||||||||    
T  30798642 ttaattagggttaataggtctttaccccccttaatatagggcactattgattttgccccctgtaattttttttttttagattccgt 30798557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 177
Target Start/End: Original strand, 37274748 - 37274793
Alignment:
Q  132 gggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    ||||||||||  ||||||| |||||||||||||| |||||||||||    
T  37274748 gggttaatagagctttaccccctataatatagggtacttttggttt 37274793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 133 - 177
Target Start/End: Original strand, 28819537 - 28819581
Alignment:
Q  133 ggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    |||||||||| ||||||| ||| ||||||||| ||||||||||||    
T  28819537 ggttaataggcctttaccccctgtaatataggtcacttttggttt 28819581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 43860971 - 43860925
Alignment:
Q  131 agggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||    
T  43860971 agggttaataggtctttacctcctgtaatatagggcacttttggttt 43860925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 20962193 - 20962272
Alignment:
Q  131 agggttaataggactttacctcctataatatagggcacttttgg-tttcccccctataaaacttttattttagattccgt 209  Q
    |||||||||||  ||||||| ||| ||||||| ||||||||||| ||| |||||| ||||| |||| |||||||||||||    
T  20962193 agggttaatagatctttaccccctgtaatatatggcacttttggttttgccccctgtaaaaatttttttttagattccgt 20962272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 34741454 - 34741372
Alignment:
Q  129 ttagggttaataggactttacctcc-tataatatagggcacttttgg-tttcccccctataaaacttttattttagattccgt 209  Q
    ||||| |||||||| ||||||| || | ||||||||||||||||||| ||| |||||| ||||| |||| |||||||||||||    
T  34741454 ttaggcttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaaaattttttttttagattccgt 34741372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 54554382 - 54554428
Alignment:
Q  131 agggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    |||||||||||| ||||||| ||| ||||||||||||||||||||||    
T  54554382 agggttaataggtctttaccccctgtaatatagggcacttttggttt 54554428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 21780121 - 21780190
Alignment:
Q  131 agggttaataggactttacctcctataatatagggcacttttggtttcccccctataaaacttttatttt 200  Q
    |||||||||||| ||||||| ||| ||||||||| || ||| ||||| |||||| ||||| |||||||||    
T  21780121 agggttaataggtctttaccccctgtaatataggtcattttcggttttccccctgtaaaatttttatttt 21780190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 41332795 - 41332750
Alignment:
Q  132 gggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    |||||||||||  |||||||||||||||||||| ||||||||||||    
T  41332795 gggttaataggcttttacctcctataatataggtcacttttggttt 41332750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 17290032 - 17289964
Alignment:
Q  133 ggttaataggactttacctcctataatatagggca-cttttggtttcccccctataaaacttttatttt 200  Q
    |||||||||| ||||||| ||||||||||||| ||  ||||| |||||||||| ||||| |||||||||    
T  17290032 ggttaataggtctttaccccctataatataggtcattttttgttttcccccctttaaaatttttatttt 17289964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 20963757 - 20963678
Alignment:
Q  132 gggttaataggactttacctcc-tataatatagggcacttttgg-tttcccccctataaaacttttattttagattccgt 209  Q
    ||||||||||| ||||||| || | ||||||||||||||||||| ||| |||||| ||||  |||| |||||||||||||    
T  20963757 gggttaataggtctttacccccctgtaatatagggcacttttggctttgccccctgtaaatttttttttttagattccgt 20963678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 50879907 - 50879954
Alignment:
Q  130 tagggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    ||||||||||||| |||||| |||| ||||||||| ||||||||||||    
T  50879907 tagggttaataggtctttacttcctgtaatataggccacttttggttt 50879954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 51164075 - 51164032
Alignment:
Q  134 gttaataggactttacctcctataatatagggcacttttggttt 177  Q
    ||||||||| ||||||| ||||||||||||| ||||||||||||    
T  51164075 gttaataggcctttaccccctataatataggtcacttttggttt 51164032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 29248241 - 29248287
Alignment:
Q  131 agggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    |||||||||||| ||||||| ||| ||||||||| ||||||||||||    
T  29248241 agggttaataggtctttaccccctgtaatataggacacttttggttt 29248287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 50881480 - 50881434
Alignment:
Q  131 agggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    |||||||||||| ||||||| ||| ||||||||| ||||||||||||    
T  50881480 agggttaataggtctttaccccctgtaatataggccacttttggttt 50881434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 34027251 - 34027206
Alignment:
Q  132 gggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    ||||||||||| ||||||| ||| ||||||||| ||||||||||||    
T  34027251 gggttaataggcctttaccccctgtaatataggtcacttttggttt 34027206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 11861900 - 11861948
Alignment:
Q  129 ttagggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    ||||||||||| || ||||||| ||| |||||||| |||||||||||||    
T  11861900 ttagggttaatgggcctttaccccctgtaatatagagcacttttggttt 11861948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 134 - 189
Target Start/End: Complemental strand, 12352514 - 12352458
Alignment:
Q  134 gttaataggactttacctcctataatatagggcacttttgg-tttcccccctataaa 189  Q
    ||||||||| ||||||| ||| ||||||||| ||||||||| |||||| ||||||||    
T  12352514 gttaataggcctttaccccctgtaatataggtcacttttggttttccctcctataaa 12352458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 130 - 177
Target Start/End: Original strand, 34739886 - 34739934
Alignment:
Q  130 tagggttaataggactttacctcc-tataatatagggcacttttggttt 177  Q
    ||||||||||||| ||||||| || | ||||||||||||||||||||||    
T  34739886 tagggttaataggtctttacccccctgtaatatagggcacttttggttt 34739934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000003; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 130 - 209
Target Start/End: Original strand, 1902928 - 1903009
Alignment:
Q  130 tagggttaataggactttacctcc-tataatatagggcacttttgg-tttcccccctataaaacttttattttagattccgt 209  Q
    ||||||||||||| ||||||| || | ||||||||||||||||||| ||| |||||| ||||| |||| |||||||||||||    
T  1902928 tagggttaataggtctttacccccctgtaatatagggcacttttggttttgccccctgtaaaattttttttttagattccgt 1903009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 130 - 190
Target Start/End: Complemental strand, 38937567 - 38937506
Alignment:
Q  130 tagggttaataggactttacctcctataatatagggcacttttgg-tttcccccctataaaa 190  Q
    ||||||||||||| ||||||| ||| ||||||||||||||||||| ||| ||||||||||||    
T  38937567 tagggttaataggtctttaccccctgtaatatagggcacttttggttttgccccctataaaa 38937506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 133 - 200
Target Start/End: Complemental strand, 22535739 - 22535672
Alignment:
Q  133 ggttaataggactttacctcctataatatagggcacttttggtttcccccctataaaacttttatttt 200  Q
    |||||||||| ||||||||||| ||||||||| || || |||||| |||||| ||||| |||||||||    
T  22535739 ggttaataggtctttacctcctgtaatataggtcatttctggttttccccctgtaaaatttttatttt 22535672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 130 - 223
Target Start/End: Complemental strand, 38877080 - 38876986
Alignment:
Q  130 tagggttaataggactttacctcctataatatagggcacttttgg-tttcccccctataaaacttttattttagattccgttgttgcaaaataaa 223  Q
    ||||||||||||| ||||||| ||| ||||||| ||||||||||| |||||  ||| ||||  |||| |||||||||||||  ||| ||||||||    
T  38877080 tagggttaatagggctttaccccctgtaatataaggcacttttggttttccttcctgtaaatttttttttttagattccgtccttgtaaaataaa 38876986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 133 - 209
Target Start/End: Original strand, 16670500 - 16670577
Alignment:
Q  133 ggttaataggactttacctcctataatatagggcacttttgg-tttcccccctataaaacttttattttagattccgt 209  Q
    |||||||||| ||||||| ||| ||||||||||||||||||| ||| |||||| |||   |||| |||||||||||||    
T  16670500 ggttaataggtctttaccccctgtaatatagggcacttttggttttgccccctgtaattttttttttttagattccgt 16670577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 7577835 - 7577755
Alignment:
Q  131 agggttaataggactttacctcc-tataatatagggcacttttgg-tttcccccctataaaacttttattttagattccgt 209  Q
    |||||||||||| ||||||| || | ||||||||||||||||||| ||| |||||| ||||  |||| |||||||||||||    
T  7577835 agggttaataggtctttacccccctgtaatatagggcacttttggttttaccccctgtaaatttttttttttagattccgt 7577755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 177
Target Start/End: Complemental strand, 1904471 - 1904420
Alignment:
Q  127 aattagggttaataggactttacctcc-tataatatagggcacttttggttt 177  Q
    |||||||||||||||| ||||||| || | ||||||||||||||||||||||    
T  1904471 aattagggttaataggtctttacccccctgtaatatagggcacttttggttt 1904420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 7576325 - 7576404
Alignment:
Q  132 gggttaataggacttta-cctcctataatatagggcacttttgg-tttcccccctataaaacttttattttagattccgt 209  Q
    ||||||||||| ||||| || ||| ||||||||||||||||||| ||| |||||| |||||  ||| |||||||||||||    
T  7576325 gggttaataggtctttatccccctgtaatatagggcacttttggttttgccccctgtaaaatattttttttagattccgt 7576404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 200
Target Start/End: Original strand, 30371383 - 30371454
Alignment:
Q  130 tagggttaataggactttacctcctataatatagggcacttttgg-tttcccccctataaaacttttatttt 200  Q
    ||||||||||||| ||||||  ||| ||||||||| || |||||| |||||||||| ||||| |||||||||    
T  30371383 tagggttaataggtctttactccctgtaatataggtcatttttggttttcccccctgtaaaatttttatttt 30371454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 44366867 - 44366946
Alignment:
Q  132 gggttaataggactttacctcc-tataatatagggcacttttgg-tttcccccctataaaacttttattttagattccgt 209  Q
    ||||||||||| ||||| |||| | ||||||||||||||||||| ||| |||||| ||||  |||| |||||||||||||    
T  44366867 gggttaataggtctttaactccctgtaatatagggcacttttggttttgccccctgtaaatttttttttttagattccgt 44366946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 19686237 - 19686191
Alignment:
Q  131 agggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    |||||||||||  ||||||| ||| ||||||||||||||||||||||    
T  19686237 agggttaatagtgctttaccccctgtaatatagggcacttttggttt 19686191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 23835830 - 23835784
Alignment:
Q  131 agggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    |||||||||||| ||||||| ||| ||||||||||||||||| ||||    
T  23835830 agggttaataggtctttaccccctgtaatatagggcacttttagttt 23835784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 200
Target Start/End: Complemental strand, 17328383 - 17328314
Alignment:
Q  131 agggttaataggactttacctcctataatatagggcacttttggtttcccccctataaaacttttatttt 200  Q
    |||||||||||| ||||||| ||| || |||| | || || |||||| |||||||||||| |||||||||    
T  17328383 agggttaataggtctttaccccctgtattatatgtcatttctggttttccccctataaaatttttatttt 17328314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 182
Target Start/End: Original strand, 31551525 - 31551578
Alignment:
Q  129 ttagggttaataggactttacctcctataatatagggcacttttggtttccccc 182  Q
    |||||||||||||| ||||| | | |||||||||| ||||||||||||| ||||    
T  31551525 ttagggttaatagggctttatcccttataatatagtgcacttttggttttcccc 31551578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 164
Target Start/End: Complemental strand, 34428923 - 34428890
Alignment:
Q  131 agggttaataggactttacctcctataatatagg 164  Q
    |||||||||||| |||||||||||||||||||||    
T  34428923 agggttaataggtctttacctcctataatatagg 34428890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 41305876 - 41305924
Alignment:
Q  127 aattagggttaataggactttacctcctataatatagggcacttttggtt 176  Q
    |||||||||||||||| ||||||| ||| ||||||||||| |||||||||    
T  41305876 aattagggttaataggtctttacc-cctgtaatatagggcgcttttggtt 41305924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 44242412 - 44242367
Alignment:
Q  132 gggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    ||||||||||| ||||||||||| ||||||||  ||||||||||||    
T  44242412 gggttaataggcctttacctcctgtaatatagatcacttttggttt 44242367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 34762179 - 34762227
Alignment:
Q  129 ttagggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    |||||| ||||||| ||||||||||| ||||||||||||||||||||||    
T  34762179 ttagggctaataggtctttacctcctgtaatatagggcacttttggttt 34762227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 130 - 189
Target Start/End: Complemental strand, 3120393 - 3120334
Alignment:
Q  130 tagggttaataggactttacctcctataatatagggcacttttggtttcccccctataaa 189  Q
    ||||||||||||| ||||||| |||  |||||||| ||||||||||||||||||| ||||    
T  3120393 tagggttaataggcctttaccccctgcaatataggtcacttttggtttcccccctgtaaa 3120334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 183
Target Start/End: Complemental strand, 30409729 - 30409675
Alignment:
Q  129 ttagggttaataggactttacctcctataatatagggcacttttggtttcccccc 183  Q
    |||||||||||||| |||||||||||  |||||||| |||||||||||| |||||    
T  30409729 ttagggttaataggcctttacctcctgcaatataggtcacttttggttttccccc 30409675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 130 - 173
Target Start/End: Complemental strand, 56171 - 56128
Alignment:
Q  130 tagggttaataggactttacctcctataatatagggcacttttg 173  Q
    ||||||||||||| ||||||| ||| ||||||||||||||||||    
T  56171 tagggttaataggtctttaccccctgtaatatagggcacttttg 56128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 184
Target Start/End: Complemental strand, 6000731 - 6000676
Alignment:
Q  129 ttagggttaataggactttacctcctataatatagggcacttttggtttcccccct 184  Q
    |||||||||||||  ||||||| ||| |||||||| ||||||||||||| ||||||    
T  6000731 ttagggttaatagagctttaccccctgtaatatagagcacttttggttttccccct 6000676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 22056482 - 22056561
Alignment:
Q  132 gggttaataggactttacctcc-tataatatagggcacttttgg-tttcccccctataaaacttttattttagattccgt 209  Q
    ||||||||||| ||||| |||| | ||||||||||||||||||| ||| |||||| ||||  |||| |||||||||||||    
T  22056482 gggttaataggtctttaactccctgtaatatagggcacttttggttttgccccctgtaaatttttttttttagattccgt 22056561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 177
Target Start/End: Complemental strand, 3063541 - 3063495
Alignment:
Q  131 agggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    |||||||||||| ||||||| ||| ||||||||| ||||||||||||    
T  3063541 agggttaataggtctttaccccctgtaatataggtcacttttggttt 3063495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 5999715 - 5999769
Alignment:
Q  130 tagggttaataggactttacctcctataatatagggcacttttggtttcccccct 184  Q
    ||||||||||||  ||||||| ||| |||||||||||| ||||||||| ||||||    
T  5999715 tagggttaatagagctttaccccctctaatatagggcatttttggttttccccct 5999769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 14328703 - 14328658
Alignment:
Q  132 gggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    ||||||||||| ||||||| ||| ||||||||| ||||||||||||    
T  14328703 gggttaataggtctttaccccctgtaatataggtcacttttggttt 14328658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 14421713 - 14421668
Alignment:
Q  132 gggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    ||||||||||| ||||||| ||| ||||||||| ||||||||||||    
T  14421713 gggttaataggtctttaccccctgtaatataggtcacttttggttt 14421668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 195
Target Start/End: Original strand, 22365832 - 22365897
Alignment:
Q  130 tagggttaataggactttacctcctataatatagggcacttttggtttcccccctataaaactttt 195  Q
    ||||||||||||| ||||||| ||   |||||||| |||||||||||| |||||| ||||| ||||    
T  22365832 tagggttaataggcctttacccccctcaatataggtcacttttggttttccccctgtaaaaatttt 22365897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 24235689 - 24235612
Alignment:
Q  131 agggttaataggactttacctc-ctataatatagggcacttttgg-tttcccccctataaaacttttattttagattc 206  Q
    |||||||||||| ||||||| | || ||||||||||||||||||| ||| |||||| ||||| |||  ||||||||||    
T  24235689 agggttaataggtctttacccctctgtaatatagggcacttttggttttgccccctgtaaaaatttatttttagattc 24235612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 209
Target Start/End: Complemental strand, 18984063 - 18983983
Alignment:
Q  131 agggttaataggactttacc-tcctataatatagggcacttttgg-tttcccccctataaaacttttattttagattccgt 209  Q
    |||||||||||| ||||||| ||||  |||||||| ||||||||| |||||||||| | ||| |||| | |||||||||||    
T  18984063 agggttaataggcctttaccctcctgcaatataggtcacttttggttttcccccctgtgaaatttttttgttagattccgt 18983983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 35595 - 35644
Alignment:
Q  128 attagggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    ||||||||||||||| ||||||| |||| |||||||| ||||||||||||    
T  35595 attagggttaataggtctttaccccctaaaatataggtcacttttggttt 35644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 430
Target Start/End: Original strand, 5383 - 5414
Alignment:
Q  399 ttttcagaaaaaggcaacacaattcaactcca 430  Q
    ||||||||||||||||||||||||||||||||    
T  5383 ttttcagaaaaaggcaacacaattcaactcca 5414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 200
Target Start/End: Original strand, 7856 - 7927
Alignment:
Q  129 ttagggttaataggactttacctcctataatatagggcacttttggtttcccccctataaaacttttatttt 200  Q
    |||||||||||||| ||||||| ||| ||||||| | || || |||||| |||||| ||||| |||||||||    
T  7856 ttagggttaataggtctttaccccctgtaatatatgtcatttctggttttccccctgtaaaatttttatttt 7927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 348 - 265
Alignment:
Q  129 ttagggttaataggactttacctcc-tataatatagggcacttttgg-tttcccccctat-aaaacttttattttagattccgt 209  Q
    |||||||||||||| ||||||| || | ||||||||||||||||||| ||| |||||| | |||| |||| |||||||||||||    
T  348 ttagggttaataggtctttacccccatgtaatatagggcacttttggttttgccccctgtaaaaagtttttttttagattccgt 265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 10079 - 10125
Alignment:
Q  131 agggttaataggactttacctcctataatatagggcacttttggttt 177  Q
    |||||||||||| ||||||| ||| ||||||||||||||||| ||||    
T  10079 agggttaataggtctttaccccctgtaatatagggcacttttagttt 10125  T

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Target: scaffold0210 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 132 - 177
Target Start/End: Complemental strand, 5953 - 5907
Alignment:
Q  132 gggttaataggactttac-ctcctataatatagggcacttttggttt 177  Q
    ||||||||||| |||||| ||||| ||||||||||||||||||||||    
T  5953 gggttaataggtctttacactcctgtaatatagggcacttttggttt 5907  T

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Target: scaffold0210; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 177
Target Start/End: Original strand, 4704 - 4753
Alignment:
Q  129 ttagggttaataggactttacctcc-tataatatagggcacttttggttt 177  Q
    |||||||||||||| ||||||| || | ||||||||||||||||||||||    
T  4704 ttagggttaataggtctttacccccctgtaatatagggcacttttggttt 4753  T

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Target: scaffold0014 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 128 - 177
Target Start/End: Original strand, 227365 - 227415
Alignment:
Q  128 attagggttaataggactttacct-cctataatatagggcacttttggttt 177  Q
    ||||||||||||||| |||||||| ||| ||||||||| ||||||||||||    
T  227365 attagggttaataggtctttacctccctgtaatataggtcacttttggttt 227415  T

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Target: scaffold0804 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0804
Description:

Target: scaffold0804; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 131 - 209
Target Start/End: Original strand, 2732 - 2812
Alignment:
Q  131 agggttaataggactttac-ctcctataatatagggcacttttgg-tttcccccctataaaacttttattttagattccgt 209  Q
    |||||||||||| |||||| | ||| ||||||||||||||||||| ||| || ||| ||||  |||| |||||||||||||    
T  2732 agggttaataggtctttactcccctgtaatatagggcacttttggttttgcctcctgtaaatttttttttttagattccgt 2812  T

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Target: scaffold0384 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 122 - 182
Target Start/End: Complemental strand, 4494 - 4434
Alignment:
Q  122 attttaattagggttaataggactttacctcctataatatagggcacttttggtttccccc 182  Q
    |||| |||| ||||||||||| ||||||| ||| ||||||||| || ||| ||||||||||    
T  4494 atttaaatttgggttaataggtctttaccccctgtaatataggtcattttcggtttccccc 4434  T

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