View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2687_low_46 (Length: 351)

Name: NF2687_low_46
Description: NF2687
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2687_low_46
NF2687_low_46
[»] chr8 (126 HSPs)
chr8 (41-235)||(40553223-40553417)
chr8 (41-235)||(39700839-39701042)
chr8 (236-343)||(40553089-40553196)
chr8 (86-226)||(11113550-11113690)
chr8 (89-235)||(14871331-14871478)
chr8 (91-235)||(30576635-30576788)
chr8 (89-235)||(6236213-6236359)
chr8 (89-230)||(36359903-36360053)
chr8 (146-327)||(23179046-23179238)
chr8 (89-228)||(9770768-9770916)
chr8 (89-197)||(16197031-16197139)
chr8 (89-235)||(8713848-8714003)
chr8 (90-235)||(44041263-44041417)
chr8 (91-212)||(9770565-9770686)
chr8 (91-235)||(23553359-23553512)
chr8 (91-235)||(25730098-25730252)
chr8 (41-145)||(9276998-9277102)
chr8 (89-197)||(25737106-25737214)
chr8 (93-235)||(25737584-25737736)
chr8 (89-197)||(39701415-39701523)
chr8 (243-338)||(8714037-8714132)
chr8 (82-197)||(43422913-43423028)
chr8 (94-235)||(9276960-9277109)
chr8 (243-332)||(30576343-30576432)
chr8 (91-234)||(8714330-8714482)
chr8 (89-197)||(40553321-40553429)
chr8 (243-322)||(39701076-39701154)
chr8 (247-333)||(39701243-39701330)
chr8 (90-197)||(45017943-45018048)
chr8 (243-333)||(23553546-23553636)
chr8 (89-230)||(29794238-29794388)
chr8 (89-230)||(45017749-45017899)
chr8 (41-142)||(30576677-30576778)
chr8 (85-161)||(29794256-29794332)
chr8 (89-197)||(43423115-43423222)
chr8 (89-234)||(9276484-9276639)
chr8 (91-193)||(39700828-39700931)
chr8 (247-333)||(14871208-14871294)
chr8 (243-333)||(30576511-30576601)
chr8 (248-333)||(14871109-14871194)
chr8 (249-338)||(23553715-23553803)
chr8 (90-179)||(29792558-29792647)
chr8 (89-237)||(31169458-31169614)
chr8 (89-197)||(4613742-4613850)
chr8 (82-162)||(4613795-4613875)
chr8 (243-327)||(8714210-8714294)
chr8 (41-161)||(9770784-9770904)
chr8 (41-161)||(30576166-30576286)
chr8 (89-169)||(36314697-36314777)
chr8 (41-161)||(36359915-36360035)
chr8 (41-145)||(36360089-36360193)
chr8 (89-197)||(36360097-36360205)
chr8 (247-326)||(6236096-6236175)
chr8 (155-233)||(5359047-5359125)
chr8 (248-318)||(44041154-44041224)
chr8 (48-137)||(43422939-43423028)
chr8 (249-333)||(5358921-5359005)
chr8 (41-137)||(11113565-11113661)
chr8 (41-161)||(23553369-23553489)
chr8 (89-193)||(30576154-30576258)
chr8 (89-145)||(35434344-35434400)
chr8 (93-197)||(41190293-41190397)
chr8 (82-145)||(9770667-9770730)
chr8 (82-161)||(16197084-16197163)
chr8 (91-161)||(5358647-5358717)
chr8 (243-333)||(9276842-9276932)
chr8 (260-338)||(12684797-12684875)
chr8 (58-144)||(25737135-25737221)
chr8 (41-137)||(14871369-14871466)
chr8 (248-333)||(16197387-16197472)
chr8 (93-235)||(23553843-23553994)
chr8 (89-162)||(29030175-29030248)
chr8 (249-333)||(6235927-6236011)
chr8 (41-197)||(9770575-9770722)
chr8 (89-145)||(13771881-13771937)
chr8 (41-161)||(39701391-39701511)
chr8 (93-197)||(43422864-43422968)
chr8 (146-197)||(8713845-8713896)
chr8 (243-338)||(9276674-9276769)
chr8 (146-197)||(39701475-39701526)
chr8 (41-180)||(43423072-43423210)
chr8 (82-145)||(44041302-44041365)
chr8 (248-338)||(34686744-34686834)
chr8 (146-235)||(35433896-35433994)
chr8 (84-145)||(45017935-45017994)
chr8 (41-145)||(8713860-8713964)
chr8 (146-194)||(9770871-9770919)
chr8 (145-197)||(25737102-25737154)
chr8 (82-161)||(9276538-9276617)
chr8 (154-228)||(13771425-13771508)
chr8 (243-338)||(16197220-16197314)
chr8 (89-136)||(23179049-23179096)
chr8 (146-197)||(35434352-35434403)
chr8 (188-234)||(6235840-6235886)
chr8 (148-233)||(34686875-34686969)
chr8 (253-327)||(44040963-44041037)
chr8 (244-333)||(4613932-4614021)
chr8 (84-145)||(25730137-25730198)
chr8 (84-145)||(25737623-25737684)
chr8 (145-189)||(4613738-4613782)
chr8 (69-137)||(6236251-6236319)
chr8 (146-194)||(9770560-9770608)
chr8 (146-194)||(23553354-23553402)
chr8 (89-161)||(34686896-34686968)
chr8 (188-232)||(44040872-44040916)
chr8 (146-194)||(45017746-45017794)
chr8 (41-145)||(45017761-45017865)
chr8 (94-145)||(13771425-13771476)
chr8 (146-197)||(13771889-13771940)
chr8 (94-161)||(16208688-16208755)
chr8 (146-197)||(30576742-30576793)
chr8 (146-193)||(31169570-31169617)
chr8 (147-194)||(36359901-36359948)
chr8 (94-197)||(40552769-40552872)
chr8 (151-197)||(5358647-5358693)
chr8 (247-293)||(25730014-25730060)
chr8 (247-293)||(25737500-25737546)
chr8 (249-322)||(31169349-31169420)
chr8 (245-326)||(35434188-35434269)
chr8 (146-194)||(14871433-14871481)
chr8 (146-194)||(16197028-16197076)
chr8 (146-194)||(29794343-29794391)
chr8 (146-194)||(36314732-36314780)
chr8 (146-194)||(36360160-36360208)
chr8 (69-129)||(43423063-43423123)
chr8 (146-194)||(43423177-43423225)
[»] chr6 (68 HSPs)
chr6 (89-235)||(11527539-11527685)
chr6 (89-232)||(2840030-2840173)
chr6 (89-235)||(2839628-2839774)
chr6 (89-228)||(16168468-16168607)
chr6 (97-235)||(9946680-9946818)
chr6 (89-235)||(17180105-17180260)
chr6 (89-197)||(32417472-32417580)
chr6 (89-197)||(32423313-32423421)
chr6 (243-333)||(10962930-10963020)
chr6 (89-235)||(28630592-28630738)
chr6 (89-235)||(10862553-10862709)
chr6 (94-197)||(16168704-16168807)
chr6 (82-161)||(32417702-32417781)
chr6 (82-161)||(32423543-32423622)
chr6 (84-197)||(32417527-32417640)
chr6 (84-197)||(32423368-32423481)
chr6 (93-205)||(9902270-9902382)
chr6 (41-197)||(16168644-16168800)
chr6 (89-224)||(20575415-20575559)
chr6 (41-137)||(11527551-11527647)
chr6 (247-338)||(28630463-28630554)
chr6 (246-327)||(11527893-11527974)
chr6 (94-230)||(32417684-32417829)
chr6 (94-230)||(32423525-32423670)
chr6 (243-326)||(9902091-9902174)
chr6 (247-338)||(17179978-17180069)
chr6 (82-145)||(20575602-20575665)
chr6 (89-233)||(11528013-11528166)
chr6 (82-137)||(16168521-16168576)
chr6 (118-197)||(24139521-24139600)
chr6 (247-333)||(17179820-17179905)
chr6 (87-145)||(20575473-20575531)
chr6 (84-161)||(17179682-17179759)
chr6 (84-145)||(17180144-17180205)
chr6 (243-327)||(2839909-2839993)
chr6 (247-327)||(11527723-11527803)
chr6 (137-197)||(20575610-20575670)
chr6 (175-235)||(24139087-24139147)
chr6 (243-338)||(2839808-2839894)
chr6 (146-197)||(2840125-2840176)
chr6 (90-145)||(10407313-10407368)
chr6 (146-193)||(10862665-10862712)
chr6 (93-212)||(20575646-20575763)
chr6 (249-338)||(10407579-10407668)
chr6 (243-324)||(24139360-24139440)
chr6 (41-137)||(2839640-2839736)
chr6 (89-161)||(9901962-9902034)
chr6 (146-194)||(32417469-32417517)
chr6 (90-138)||(32417593-32417641)
chr6 (146-194)||(32423310-32423358)
chr6 (90-138)||(32423434-32423482)
chr6 (146-197)||(2839625-2839676)
chr6 (188-235)||(9902010-9902057)
chr6 (241-308)||(9946582-9946649)
chr6 (82-137)||(9946718-9946773)
chr6 (82-145)||(10962794-10962857)
chr6 (188-235)||(10962849-10962896)
chr6 (188-234)||(10407709-10407755)
chr6 (160-197)||(17132228-17132265)
chr6 (41-137)||(9902278-9902374)
chr6 (146-194)||(9902341-9902389)
chr6 (249-327)||(28630318-28630393)
chr6 (188-235)||(10407360-10407407)
chr6 (146-193)||(16168465-16168512)
chr6 (251-333)||(24139191-24139273)
chr6 (41-161)||(10862576-10862697)
chr6 (94-171)||(10962746-10962823)
chr6 (84-145)||(24139513-24139574)
[»] chr4 (83 HSPs)
chr4 (89-235)||(19631766-19631916)
chr4 (41-197)||(43098365-43098521)
chr4 (82-197)||(2788928-2789043)
chr4 (41-227)||(26329921-26330116)
chr4 (89-235)||(52183399-52183545)
chr4 (90-235)||(52865960-52866105)
chr4 (89-197)||(43098425-43098533)
chr4 (89-227)||(43098185-43098328)
chr4 (91-235)||(5387131-5387284)
chr4 (93-197)||(2788988-2789092)
chr4 (247-338)||(52181911-52182002)
chr4 (91-180)||(2788795-2788884)
chr4 (89-197)||(41735815-41735923)
chr4 (243-338)||(19681380-19681475)
chr4 (90-197)||(26330020-26330127)
chr4 (150-235)||(44916286-44916371)
chr4 (93-197)||(9320017-9320121)
chr4 (89-235)||(8408826-8408981)
chr4 (89-234)||(31229257-31229412)
chr4 (247-338)||(31229605-31229696)
chr4 (242-324)||(8408711-8408793)
chr4 (94-192)||(22025319-22025417)
chr4 (89-235)||(30543103-30543240)
chr4 (91-197)||(52181720-52181826)
chr4 (94-235)||(52568162-52568311)
chr4 (82-178)||(22025274-22025369)
chr4 (243-338)||(19632084-19632179)
chr4 (82-145)||(26329819-26329882)
chr4 (95-197)||(35046437-35046539)
chr4 (256-338)||(52568036-52568118)
chr4 (93-197)||(2909182-2909286)
chr4 (146-233)||(52567743-52567839)
chr4 (115-197)||(35046560-35046642)
chr4 (243-333)||(52182011-52182100)
chr4 (89-142)||(42116076-42116129)
chr4 (89-232)||(8408354-8408497)
chr4 (243-333)||(8408533-8408624)
chr4 (84-143)||(35046486-35046545)
chr4 (90-145)||(52181779-52181834)
chr4 (91-145)||(2508267-2508321)
chr4 (246-332)||(30542815-30542901)
chr4 (128-197)||(26329805-26329874)
chr4 (48-137)||(41735834-41735923)
chr4 (146-235)||(52866330-52866418)
chr4 (41-145)||(5387141-5387245)
chr4 (151-230)||(36890618-36890706)
chr4 (89-197)||(41735756-41735863)
chr4 (89-161)||(52567746-52567818)
chr4 (82-161)||(22025109-22025188)
chr4 (93-212)||(23085205-23085323)
chr4 (90-137)||(44916324-44916371)
chr4 (146-212)||(8408351-8408417)
chr4 (146-194)||(8408936-8408984)
chr4 (94-142)||(35046555-35046603)
chr4 (247-327)||(52567879-52567958)
chr4 (146-197)||(19632259-19632309)
chr4 (192-235)||(19681304-19681347)
chr4 (136-230)||(22025103-22025206)
chr4 (86-161)||(31229315-31229390)
chr4 (82-145)||(52568200-52568263)
chr4 (90-212)||(35023750-35023872)
chr4 (41-137)||(36890485-36890583)
chr4 (93-138)||(52866366-52866411)
chr4 (41-137)||(2788928-2789024)
chr4 (78-138)||(2909227-2909287)
chr4 (146-194)||(19631763-19631811)
chr4 (146-194)||(52183500-52183548)
chr4 (94-161)||(2508684-2508751)
chr4 (82-145)||(8408398-8408461)
chr4 (248-327)||(30542985-30543064)
chr4 (91-142)||(36890655-36890706)
chr4 (252-327)||(42115917-42115991)
chr4 (82-137)||(52183437-52183492)
chr4 (246-333)||(52866206-52866292)
chr4 (146-180)||(22025066-22025100)
chr4 (188-226)||(30542731-30542769)
chr4 (115-172)||(19681222-19681279)
chr4 (146-179)||(26329776-26329809)
chr4 (94-197)||(36890478-36890583)
chr4 (271-315)||(5387339-5387382)
chr4 (41-145)||(9320025-9320129)
chr4 (176-216)||(26709513-26709553)
chr4 (202-234)||(52181840-52181872)
[»] chr7 (145 HSPs)
chr7 (89-212)||(31893474-31893597)
chr7 (89-235)||(1441408-1441554)
chr7 (89-235)||(5559594-5559738)
chr7 (91-235)||(35214811-35214965)
chr7 (89-235)||(39958690-39958836)
chr7 (93-227)||(31893257-31893391)
chr7 (89-197)||(5805041-5805149)
chr7 (89-235)||(8040122-8040267)
chr7 (89-197)||(5805607-5805714)
chr7 (41-197)||(21412881-21413037)
chr7 (41-197)||(33879470-33879625)
chr7 (89-197)||(33879529-33879637)
chr7 (41-197)||(34951415-34951571)
chr7 (91-197)||(21433149-21433255)
chr7 (247-338)||(5559465-5559556)
chr7 (90-197)||(21412870-21412977)
chr7 (90-235)||(8039667-8039804)
chr7 (91-197)||(22876867-22876972)
chr7 (41-161)||(19925327-19925447)
chr7 (93-197)||(19925351-19925455)
chr7 (89-197)||(39959207-39959315)
chr7 (89-235)||(20366052-20366205)
chr7 (82-161)||(31175946-31176025)
chr7 (41-176)||(40904706-40904841)
chr7 (89-235)||(5559110-5559267)
chr7 (89-197)||(36566281-36566389)
chr7 (41-197)||(36566293-36566449)
chr7 (90-234)||(28256913-28257057)
chr7 (41-197)||(31893438-31893585)
chr7 (89-193)||(40904694-40904798)
chr7 (90-197)||(1286374-1286481)
chr7 (96-231)||(42990988-42991122)
chr7 (91-197)||(1346485-1346591)
chr7 (41-161)||(5559122-5559244)
chr7 (248-338)||(20183963-20184053)
chr7 (94-235)||(33235042-33235192)
chr7 (94-235)||(33235518-33235668)
chr7 (249-338)||(5805236-5805325)
chr7 (91-235)||(28256498-28256651)
chr7 (41-161)||(35214821-35214942)
chr7 (41-145)||(1346495-1346599)
chr7 (89-197)||(20366551-20366659)
chr7 (89-228)||(23150642-23150790)
chr7 (89-197)||(27995064-27995172)
chr7 (243-327)||(28256686-28256770)
chr7 (146-230)||(36566493-36566577)
chr7 (82-161)||(10619856-10619935)
chr7 (82-193)||(19925161-19925271)
chr7 (137-235)||(23679497-23679603)
chr7 (247-338)||(27995415-27995505)
chr7 (243-338)||(35214999-35215093)
chr7 (247-333)||(1348837-1348923)
chr7 (243-338)||(8039838-8039931)
chr7 (91-235)||(35215290-35215443)
chr7 (243-327)||(1286560-1286644)
chr7 (93-235)||(1349115-1349269)
chr7 (41-161)||(5805053-5805173)
chr7 (89-235)||(10620201-10620344)
chr7 (89-197)||(19925108-19925215)
chr7 (82-197)||(21433287-21433403)
chr7 (82-161)||(21413099-21413177)
chr7 (114-197)||(31175970-31176053)
chr7 (94-197)||(34951236-34951338)
chr7 (82-145)||(34951283-34951346)
chr7 (243-317)||(5075475-5075549)
chr7 (249-327)||(5559307-5559385)
chr7 (243-333)||(5805396-5805486)
chr7 (247-333)||(20366243-20366329)
chr7 (245-327)||(27995255-27995337)
chr7 (89-171)||(34951501-34951583)
chr7 (91-197)||(41020137-41020242)
chr7 (115-180)||(5075377-5075441)
chr7 (115-197)||(29591068-29591152)
chr7 (247-323)||(1349001-1349077)
chr7 (41-137)||(5559631-5559726)
chr7 (41-137)||(31893265-31893361)
chr7 (93-193)||(42990507-42990607)
chr7 (243-327)||(42990866-42990950)
chr7 (82-161)||(1286426-1286505)
chr7 (244-327)||(39959042-39959125)
chr7 (95-197)||(4187515-4187617)
chr7 (91-161)||(20366527-20366597)
chr7 (82-164)||(21433200-21433282)
chr7 (249-343)||(33235232-33235326)
chr7 (243-333)||(33235394-33235484)
chr7 (243-333)||(42990692-42990782)
chr7 (84-161)||(33235541-33235618)
chr7 (41-145)||(4187521-4187625)
chr7 (243-327)||(8040009-8040093)
chr7 (137-232)||(10619851-10619955)
chr7 (137-197)||(21433348-21433408)
chr7 (82-161)||(5805583-5805662)
chr7 (146-197)||(27995061-27995112)
chr7 (82-133)||(28256954-28257005)
chr7 (82-145)||(33235090-33235153)
chr7 (146-193)||(36566278-36566325)
chr7 (41-161)||(1349138-1349261)
chr7 (188-233)||(27995548-27995593)
chr7 (41-158)||(39959186-39959303)
chr7 (84-137)||(41020137-41020190)
chr7 (282-338)||(10620088-10620144)
chr7 (89-161)||(27995569-27995641)
chr7 (90-138)||(31893437-31893485)
chr7 (146-194)||(33879592-33879640)
chr7 (246-338)||(39958873-39958964)
chr7 (82-137)||(10620239-10620294)
chr7 (94-193)||(20101831-20101928)
chr7 (266-333)||(20184125-20184192)
chr7 (279-338)||(28256784-28256843)
chr7 (94-145)||(36566406-36566457)
chr7 (91-145)||(1441011-1441065)
chr7 (243-305)||(20366407-20366469)
chr7 (84-161)||(4187679-4187756)
chr7 (41-142)||(20101838-20101937)
chr7 (248-305)||(29590971-29591028)
chr7 (145-197)||(1441005-1441057)
chr7 (41-137)||(1441446-1441542)
chr7 (188-228)||(4187663-4187703)
chr7 (93-197)||(6220389-6220492)
chr7 (146-194)||(20366049-20366096)
chr7 (82-142)||(23679539-23679598)
chr7 (146-194)||(31893250-31893298)
chr7 (146-194)||(34951538-34951586)
chr7 (243-327)||(35215172-35215256)
chr7 (89-137)||(36566526-36566574)
chr7 (146-193)||(5559694-5559741)
chr7 (146-189)||(23150639-23150682)
chr7 (146-197)||(28104297-28104348)
chr7 (125-192)||(33879350-33879417)
chr7 (82-145)||(35215329-35215392)
chr7 (146-193)||(40904691-40904738)
chr7 (89-171)||(21413148-21413230)
chr7 (176-234)||(28104633-28104691)
chr7 (244-326)||(31175804-31175885)
chr7 (146-191)||(39958687-39958732)
chr7 (146-194)||(1346480-1346528)
chr7 (247-327)||(1441153-1441233)
chr7 (146-194)||(1441509-1441557)
chr7 (146-197)||(5559107-5559159)
chr7 (248-304)||(10619997-10620052)
chr7 (191-235)||(20183883-20183927)
chr7 (145-197)||(20366611-20366663)
chr7 (146-194)||(21433144-21433192)
chr7 (145-197)||(28256492-28256544)
chr7 (202-230)||(33879407-33879435)
[»] chr1 (69 HSPs)
chr1 (89-235)||(10685851-10685997)
chr1 (114-327)||(49650865-49651097)
chr1 (89-235)||(10686680-10686835)
chr1 (91-227)||(49650578-49650715)
chr1 (89-235)||(27351054-27351209)
chr1 (242-327)||(34254863-34254947)
chr1 (89-197)||(29419062-29419170)
chr1 (89-191)||(11897845-11897947)
chr1 (82-189)||(44964035-44964142)
chr1 (89-235)||(48352708-48352863)
chr1 (125-235)||(4772612-4772722)
chr1 (82-197)||(17898801-17898916)
chr1 (251-333)||(10686556-10686638)
chr1 (243-333)||(29418887-29418977)
chr1 (236-338)||(37663231-37663333)
chr1 (91-193)||(44964091-44964192)
chr1 (41-197)||(1765881-1766037)
chr1 (93-172)||(4030310-4030390)
chr1 (243-325)||(8902953-8903035)
chr1 (243-333)||(10686388-10686478)
chr1 (89-227)||(27351518-27351656)
chr1 (243-325)||(49650757-49650839)
chr1 (89-197)||(17898861-17898969)
chr1 (250-326)||(34254697-34254773)
chr1 (41-161)||(48352731-48352851)
chr1 (154-233)||(4030721-4030800)
chr1 (82-161)||(8902817-8902896)
chr1 (243-338)||(27351381-27351476)
chr1 (241-327)||(4030601-4030687)
chr1 (91-197)||(34254504-34254610)
chr1 (266-327)||(39302480-39302541)
chr1 (41-145)||(27351066-27351170)
chr1 (236-327)||(27351236-27351330)
chr1 (41-145)||(29419054-29419158)
chr1 (89-232)||(39302663-39302809)
chr1 (244-338)||(8903116-8903210)
chr1 (91-145)||(34254564-34254618)
chr1 (96-161)||(1765763-1765828)
chr1 (84-137)||(4772650-4772703)
chr1 (120-197)||(8902795-8902872)
chr1 (249-333)||(4772291-4772374)
chr1 (146-194)||(11897842-11897890)
chr1 (94-197)||(1765941-1766044)
chr1 (149-224)||(4772174-4772249)
chr1 (82-137)||(10685904-10685959)
chr1 (146-235)||(8903245-8903343)
chr1 (41-131)||(11897857-11897947)
chr1 (115-197)||(44963868-44963950)
chr1 (145-194)||(10685847-10685896)
chr1 (146-194)||(10686790-10686838)
chr1 (41-145)||(44964019-44964123)
chr1 (86-137)||(4772171-4772222)
chr1 (243-327)||(39302546-39302626)
chr1 (146-189)||(39302769-39302812)
chr1 (188-230)||(1765804-1765846)
chr1 (146-194)||(48352818-48352866)
chr1 (82-137)||(49650629-49650685)
chr1 (41-144)||(17898794-17898897)
chr1 (146-197)||(34254499-34254550)
chr1 (188-235)||(48352311-48352358)
chr1 (188-229)||(2965542-2965583)
chr1 (153-194)||(4030310-4030351)
chr1 (153-233)||(39302338-39302427)
chr1 (299-339)||(2965677-2965717)
chr1 (89-145)||(8903284-8903340)
chr1 (146-194)||(27351051-27351099)
chr1 (146-194)||(27351611-27351659)
chr1 (93-161)||(39302338-39302406)
chr1 (90-142)||(44963903-44963955)
[»] scaffold0027 (7 HSPs)
scaffold0027 (90-235)||(9398-9543)
scaffold0027 (248-343)||(9582-9677)
scaffold0027 (254-333)||(9744-9823)
scaffold0027 (90-180)||(9903-9993)
scaffold0027 (41-137)||(9409-9505)
scaffold0027 (150-194)||(9949-9993)
scaffold0027 (41-132)||(9891-9982)
[»] chr5 (96 HSPs)
chr5 (89-235)||(13538472-13538622)
chr5 (93-226)||(26275511-26275644)
chr5 (91-234)||(36417891-36418034)
chr5 (89-235)||(20728531-20728686)
chr5 (89-235)||(36418366-36418521)
chr5 (89-235)||(35190388-35190533)
chr5 (115-235)||(35189943-35190062)
chr5 (89-193)||(18951306-18951410)
chr5 (89-180)||(14235571-14235662)
chr5 (82-197)||(32660255-32660370)
chr5 (89-197)||(1722503-1722611)
chr5 (89-197)||(6336146-6336254)
chr5 (89-197)||(32660202-32660310)
chr5 (41-161)||(36418389-36418509)
chr5 (91-235)||(19278710-19278862)
chr5 (249-338)||(20728726-20728814)
chr5 (91-230)||(38405518-38405654)
chr5 (89-235)||(18248961-18249116)
chr5 (247-333)||(35190100-35190186)
chr5 (89-235)||(5734947-5735101)
chr5 (151-227)||(38082621-38082697)
chr5 (247-338)||(19278900-19278991)
chr5 (58-145)||(32660291-32660378)
chr5 (41-175)||(18951318-18951452)
chr5 (243-333)||(36418240-36418330)
chr5 (258-327)||(26275856-26275925)
chr5 (146-235)||(26275974-26276063)
chr5 (91-235)||(30738223-30738377)
chr5 (89-164)||(13543087-13543162)
chr5 (243-338)||(18249150-18249245)
chr5 (243-338)||(18321059-18321153)
chr5 (146-201)||(31813951-31814006)
chr5 (243-333)||(20728887-20728977)
chr5 (247-333)||(30737936-30738022)
chr5 (146-235)||(32459427-32459525)
chr5 (250-323)||(13543285-13543358)
chr5 (246-327)||(13543450-13543531)
chr5 (246-338)||(5734819-5734911)
chr5 (45-145)||(6336162-6336262)
chr5 (246-338)||(38405392-38405483)
chr5 (89-235)||(5734466-5734620)
chr5 (243-338)||(30738094-30738189)
chr5 (243-333)||(5734657-5734746)
chr5 (91-161)||(20729033-20729103)
chr5 (91-137)||(26276012-26276058)
chr5 (243-333)||(35190264-35190354)
chr5 (91-145)||(35891266-35891320)
chr5 (243-327)||(1722685-1722769)
chr5 (145-197)||(18951302-18951354)
chr5 (41-145)||(20728543-20728647)
chr5 (89-161)||(32459430-32459502)
chr5 (98-161)||(18238327-18238390)
chr5 (94-197)||(30737748-30737851)
chr5 (250-338)||(36418075-36418167)
chr5 (152-235)||(38405112-38405194)
chr5 (91-145)||(19279236-19279290)
chr5 (151-235)||(20729010-20729103)
chr5 (82-142)||(1722983-1723043)
chr5 (93-161)||(18237919-18237987)
chr5 (146-194)||(38405611-38405659)
chr5 (188-235)||(1722941-1722988)
chr5 (189-232)||(35890878-35890921)
chr5 (82-140)||(18321223-18321281)
chr5 (146-212)||(20729093-20729159)
chr5 (247-333)||(26275686-26275772)
chr5 (93-162)||(1722567-1722636)
chr5 (84-161)||(5734970-5735046)
chr5 (41-145)||(13543099-13543206)
chr5 (188-233)||(18238306-18238351)
chr5 (145-194)||(30737739-30737788)
chr5 (248-332)||(19279065-19279149)
chr5 (89-137)||(31813955-31814003)
chr5 (82-145)||(5734519-5734581)
chr5 (82-145)||(6336332-6336395)
chr5 (188-231)||(13543198-13543241)
chr5 (146-197)||(19278705-19278756)
chr5 (236-327)||(32459543-32459634)
chr5 (87-138)||(35189974-35190025)
chr5 (146-197)||(35891274-35891325)
chr5 (82-137)||(36417942-36417997)
chr5 (146-197)||(36418473-36418524)
chr5 (146-193)||(40744974-40745021)
chr5 (148-194)||(5735056-5735102)
chr5 (84-145)||(14235626-14235685)
chr5 (82-136)||(35190426-35190480)
chr5 (125-198)||(6336339-6336412)
chr5 (84-145)||(30738264-30738325)
chr5 (121-162)||(35342324-35342365)
chr5 (146-194)||(13543084-13543132)
chr5 (153-193)||(18237919-18237959)
chr5 (244-276)||(18320898-18320930)
chr5 (146-194)||(20728528-20728576)
chr5 (41-137)||(26275519-26275615)
chr5 (82-142)||(30737796-30737856)
chr5 (298-326)||(32459704-32459732)
chr5 (146-194)||(36417886-36417934)
[»] chr2 (71 HSPs)
chr2 (41-197)||(30907088-30907244)
chr2 (91-229)||(41265226-41265364)
chr2 (89-232)||(27893530-27893682)
chr2 (89-197)||(31263927-31264035)
chr2 (89-234)||(27893037-27893182)
chr2 (89-235)||(36196470-36196623)
chr2 (89-233)||(39301801-39301945)
chr2 (91-197)||(30907327-30907434)
chr2 (241-338)||(36196341-36196438)
chr2 (93-197)||(30907080-30907184)
chr2 (41-197)||(31263939-31264095)
chr2 (91-235)||(31264125-31264280)
chr2 (91-197)||(34336039-34336145)
chr2 (89-233)||(19080631-19080784)
chr2 (118-231)||(20535933-20536046)
chr2 (150-230)||(21813209-21813289)
chr2 (41-197)||(34336227-34336383)
chr2 (89-197)||(34429683-34429791)
chr2 (89-197)||(11871764-11871872)
chr2 (246-338)||(19080823-19080915)
chr2 (243-338)||(20535797-20535892)
chr2 (82-161)||(31264148-31264227)
chr2 (95-212)||(37542956-37543072)
chr2 (243-327)||(20535634-20535718)
chr2 (89-161)||(42117196-42117268)
chr2 (82-137)||(5116900-5116955)
chr2 (84-147)||(16781052-16781115)
chr2 (82-145)||(27893566-27893629)
chr2 (82-161)||(36196493-36196572)
chr2 (247-333)||(11871593-11871679)
chr2 (89-197)||(16781062-16781171)
chr2 (85-197)||(39376360-39376472)
chr2 (118-197)||(8260416-8260495)
chr2 (82-161)||(19080684-19080763)
chr2 (82-161)||(34336090-34336169)
chr2 (243-333)||(27893403-27893493)
chr2 (93-171)||(37543119-37543197)
chr2 (94-228)||(39376181-39376314)
chr2 (146-194)||(27893034-27893082)
chr2 (41-145)||(30907148-30907252)
chr2 (89-197)||(34336287-34336395)
chr2 (58-183)||(37542978-37543094)
chr2 (41-145)||(39376352-39376456)
chr2 (137-212)||(5116895-5116970)
chr2 (190-232)||(20535555-20535597)
chr2 (41-145)||(30907319-30907424)
chr2 (82-139)||(34429736-34429793)
chr2 (141-232)||(15506040-15506140)
chr2 (146-194)||(27893637-27893685)
chr2 (249-333)||(39301675-39301759)
chr2 (147-194)||(34429681-34429728)
chr2 (84-197)||(32341450-32341564)
chr2 (95-197)||(39376420-39376522)
chr2 (41-130)||(37543100-37543189)
chr2 (82-142)||(11871759-11871819)
chr2 (82-142)||(15506041-15506101)
chr2 (146-194)||(31263924-31263972)
chr2 (146-194)||(34336350-34336398)
chr2 (248-324)||(39301512-39301588)
chr2 (146-194)||(41265321-41265369)
chr2 (91-130)||(13315808-13315847)
chr2 (146-193)||(37543157-37543204)
chr2 (188-235)||(42117173-42117220)
chr2 (146-180)||(16781140-16781174)
chr2 (147-177)||(34425107-34425137)
chr2 (121-162)||(11949662-11949703)
chr2 (94-163)||(19081055-19081124)
chr2 (146-198)||(16780938-16780990)
chr2 (154-194)||(19081084-19081124)
chr2 (90-138)||(21813209-21813257)
chr2 (146-194)||(32341392-32341440)
[»] scaffold0070 (6 HSPs)
scaffold0070 (89-235)||(28547-28702)
scaffold0070 (151-233)||(29027-29108)
scaffold0070 (41-161)||(28559-28679)
scaffold0070 (243-326)||(28909-28991)
scaffold0070 (243-291)||(28736-28784)
scaffold0070 (93-137)||(29113-29157)
[»] scaffold0019 (6 HSPs)
scaffold0019 (48-179)||(124328-124459)
scaffold0019 (89-197)||(124146-124253)
scaffold0019 (89-194)||(124373-124478)
scaffold0019 (41-145)||(124158-124261)
scaffold0019 (146-197)||(124143-124194)
scaffold0019 (41-132)||(124315-124406)
[»] scaffold0746 (6 HSPs)
scaffold0746 (89-235)||(501-656)
scaffold0746 (89-233)||(24-176)
scaffold0746 (82-161)||(524-603)
scaffold0746 (145-197)||(20-72)
scaffold0746 (243-293)||(417-467)
scaffold0746 (248-326)||(217-294)
[»] chr3 (55 HSPs)
chr3 (137-229)||(4276597-4276689)
chr3 (89-197)||(31247657-31247765)
chr3 (89-232)||(3088071-3088214)
chr3 (91-227)||(50530251-50530386)
chr3 (243-338)||(21376758-21376853)
chr3 (243-338)||(35555820-35555915)
chr3 (146-232)||(35555952-35556038)
chr3 (146-235)||(14629285-14629374)
chr3 (89-235)||(21376985-21377120)
chr3 (89-235)||(4276138-4276293)
chr3 (243-338)||(14629506-14629601)
chr3 (89-232)||(35555529-35555682)
chr3 (247-338)||(53783071-53783162)
chr3 (243-338)||(4276327-4276423)
chr3 (41-145)||(31247649-31247753)
chr3 (243-338)||(24707599-24707694)
chr3 (82-145)||(54456800-54456863)
chr3 (243-333)||(31247318-31247408)
chr3 (90-195)||(3087086-3087190)
chr3 (82-197)||(54456808-54456923)
chr3 (146-212)||(4276665-4276731)
chr3 (243-317)||(14629407-14629481)
chr3 (82-197)||(5505692-5505809)
chr3 (243-327)||(3087231-3087315)
chr3 (249-333)||(21376862-21376946)
chr3 (248-332)||(31247487-31247571)
chr3 (82-145)||(4276191-4276254)
chr3 (236-327)||(35555712-35555805)
chr3 (91-176)||(14964648-14964732)
chr3 (90-234)||(21376570-21376723)
chr3 (82-137)||(3088106-3088161)
chr3 (82-137)||(4276629-4276684)
chr3 (150-197)||(14964737-14964784)
chr3 (91-145)||(31247192-31247245)
chr3 (91-137)||(50530397-50530443)
chr3 (91-145)||(54456676-54456730)
chr3 (146-182)||(3088181-3088217)
chr3 (89-137)||(14629288-14629336)
chr3 (90-142)||(24707471-24707523)
chr3 (188-228)||(24707518-24707558)
chr3 (89-137)||(35555987-35556035)
chr3 (90-137)||(14964737-14964784)
chr3 (146-197)||(50530246-50530297)
chr3 (130-164)||(14964780-14964814)
chr3 (247-332)||(21410151-21410234)
chr3 (151-197)||(31247192-31247237)
chr3 (41-111)||(50530261-50530331)
chr3 (247-333)||(53783235-53783321)
chr3 (188-230)||(54456722-54456764)
chr3 (243-299)||(3087978-3088034)
chr3 (168-228)||(5505595-5505655)
chr3 (146-182)||(21377087-21377123)
chr3 (202-234)||(21410273-21410305)
chr3 (146-194)||(31247720-31247768)
chr3 (146-197)||(35555526-35555578)
[»] scaffold0041 (3 HSPs)
scaffold0041 (41-176)||(45177-45312)
scaffold0041 (89-193)||(45220-45324)
scaffold0041 (146-193)||(45280-45327)
[»] scaffold0374 (5 HSPs)
scaffold0374 (89-161)||(16176-16248)
scaffold0374 (188-235)||(16224-16271)
scaffold0374 (94-141)||(16081-16128)
scaffold0374 (93-142)||(16615-16664)
scaffold0374 (188-232)||(16576-16620)


Alignment Details
Target: chr8 (Bit Score: 159; Significance: 1e-84; HSPs: 126)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 41 - 235
Target Start/End: Complemental strand, 40553417 - 40553223
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    |||||| |||||||||||||||| ||||||||  || ||| ||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  40553417 ttgacataattcctaacttagtcctttgagtttaaaaagtttcaatcaggtccttttagtttgacaaaatttctaagttagtcttttaagtttcaaaagt 40553318  T
Q  141 ttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  40553317 ttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaatagatcattttacttgataaactatttcaccgttaccc 40553223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 41 - 235
Target Start/End: Original strand, 39700839 - 39701042
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    |||||| ||||| ||  |||||||||| ||||   | ||| ||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||    
T  39700839 ttgacaaaattcttatgttagtcttttaagttttgaaagtttcaattaggtccttttagtttgacaaaattcttaagttagtcctttaagttttaaaagt 39700938  T
Q  141 ttcaatttggtccttttagtttgacagaattctcaagttaatcattt---------aagtttcaaatagatcattttagttgataaactatttcaccgtt 231  Q
    |||||||  ||||||||||||||||| |||||  ||||||||| |||         ||||||||||||  ||||||||||||||||||||||||||||||    
T  39700939 ttcaattatgtccttttagtttgacaaaattcctaagttaatcctttaagtttcaaaagtttcaaatatgtcattttagttgataaactatttcaccgtt 39701038  T
Q  232 accc 235  Q
    ||||    
T  39701039 accc 39701042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 236 - 343
Target Start/End: Complemental strand, 40553196 - 40553089
Alignment:
Q  236 gttggtatagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatct 335  Q
    |||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||| |    
T  40553196 gttgatatagccgttaagttgttgacttgtatcaaaatgttgtcttttaaaagctccagggtgtcaaaacgctacctttaatggtcacaaattatcattt 40553097  T
Q  336 atattgtt 343  Q
    ||||||||    
T  40553096 atattgtt 40553089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 86 - 226
Target Start/End: Original strand, 11113550 - 11113690
Alignment:
Q  86 ttaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcat 185  Q
    |||| |||||||||||||||| |||| ||||||||||||||||| |||  |||||||||||  |||||||||||||||||||||||  ||||||| || |    
T  11113550 ttagatccttttagtttgacataattcctaagttagtcctttaaattttgaaagtttcaatcaggtccttttagtttgacagaatttccaagttagtcct 11113649  T
Q  186 ttaagtttcaaatagatcattttagttgataaactatttca 226  Q
    ||||||||||||||  | |||||||||||||||||||||||    
T  11113650 ttaagtttcaaataagttattttagttgataaactatttca 11113690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 14871478 - 14871331
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttag-tttgacagaattctcaagttaatcattt 187  Q
    |||||||| ||||||||| |||| ||||||||||| |||||||||| |||||||||||| ||| ||||||| ||||||| ||||||||| ||| || |||    
T  14871478 ggtcctttaagtttgacagaattcctaagttagtcttttaagtttcgaaagtttcaattaggttcttttagttttgacataattctcaaattagtccttt 14871379  T
Q  188 aagtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    ||||||||||||| || |||||||||||||||||||| | ||||||||    
T  14871378 aagtttcaaataggtccttttagttgataaactatttaatcgttaccc 14871331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 91 - 235
Target Start/End: Complemental strand, 30576788 - 30576635
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaag 190  Q
    |||||||||||||||| |||||  ||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||| ||||||| || ||||||    
T  30576788 tccttttagtttgacagaattttcaagttagtcttctaagtttcaaaagtttcaattaggtccttttagtttgacagaattcccaagttagtcctttaag 30576689  T
Q  191 tttc---------aaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    ||||         |||||  ||||||||||||||||||||||||||||||||||    
T  30576688 tttcaaaagttttaaatatgtcattttagttgataaactatttcaccgttaccc 30576635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 6236359 - 6236213
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||| |||||||| | |||||| | ||||||||||||| |||||||||| |||||||||| ||||||||| ||| ||||||| |  ||||    
T  6236359 ggtccttttagttttacaaaattcccaagttatttctttaagtttcaatagtttcaattaggtccttttaatttgacagacttcccaagttagtacttta 6236260  T
Q  189 agtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    |||||||||||| |||||||| |||| ||||||||||| | ||||||    
T  6236259 agtttcaaataggtcattttaattgaaaaactatttcatctttaccc 6236213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 89 - 230
Target Start/End: Original strand, 36359903 - 36360053
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattt- 187  Q
    |||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||| |||  ||||||||||||||||||| ||||||| || |||     
T  36359903 ggtccttttagtttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtatttttagtttgacagaattcccaagttagtccttta 36360002  T
Q  188 --------aagtttcaaatagatcattttagttgataaactatttcaccgt 230  Q
            ||||||||||||| ||||||||||||||||||||||| |||||    
T  36360003 agttttaaaagtttcaaataggtcattttagttgataaactattttaccgt 36360053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 146 - 327
Target Start/End: Original strand, 23179046 - 23179238
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaatagatcattttagttgataaactatttcaccgttaccc-----gttgg 240  Q
    ||||||||||||||||||||||||||| ||||||| || |||||||||||| ||| || |||||||||||||||||| ||| | ||||||     ||  |    
T  23179046 tttggtccttttagtttgacagaattcccaagttagtcctttaagtttcaagtaggtcgttttagttgataaactatctcagcattacccctactgtcag 23179145  T
Q  241 t--atagccgttaa----gttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaat 327  Q
    |  |||   |||||    |||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  23179146 ttaataattgttaattaagttgttgacttggatcaaaatactgtcttttaaaagcttcagagtgtcaaaacgctacgtttaatgatcacaaat 23179238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 89 - 228
Target Start/End: Complemental strand, 9770916 - 9770768
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattt- 187  Q
    |||||||||||||||||||||||   |||||||||||||||||||| ||||||||||||  ||| ||||||||||||||||||| ||||||| || |||     
T  9770916 ggtccttttagtttgacaaaattctcaagttagtcctttaagtttcgaaagtttcaattaagtcattttagtttgacagaattcccaagttagtccttta 9770817  T
Q  188 --------aagtttcaaatagatcattttagttgataaactatttcacc 228  Q
            ||||||||||||| || ||||||||||||||||||||||||    
T  9770816 attttcaaaagtttcaaataggtccttttagttgataaactatttcacc 9770768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 16197031 - 16197139
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    ||||||||| |||||||| ||||   |||||||||| ||||||||| ||||||||||||  ||||||||||||||||||||||| |||||||||||||||    
T  16197031 ggtccttttcgtttgacagaattatcaagttagtccattaagtttcgaaagtttcaattatgtccttttagtttgacagaattcccaagttaatcattta 16197130  T
Q  189 agtttcaaa 197  Q
    |||||||||    
T  16197131 agtttcaaa 16197139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 8713848 - 8714003
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||||||| ||||   |||||||||||||||||||||||||||||||||   | |||||||||||||| ||||| ||||||| || ||||    
T  8713848 ggtccttttagtttgacataattctcaagttagtcctttaagtttcaaaagtttcaattaaattcttttagtttgacaaaattcacaagttagtctttta 8713947  T
Q  189 ag---------tttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    ||         |||||||||||||||||||||||||||| | ||||||||||||||    
T  8713948 agtttcaaaaatttcaaatagatcattttagttgataaattgtttcaccgttaccc 8714003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 90 - 235
Target Start/End: Complemental strand, 44041417 - 44041263
Alignment:
Q  90 gtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaa 189  Q
    |||||||||||||||||||||||  |||||||||||||||||||  ||||||||||||  |||||||||||||||||||||||  |||||| || || ||    
T  44041417 gtccttttagtttgacaaaattttcaagttagtcctttaagttttgaaagtttcaattatgtccttttagtttgacagaattcctaagttagtctttaaa 44041318  T
Q  190 g---------tttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    |         |||||||||  ||||||||||||||||||||||||||| ||||||    
T  44041317 gtttcaaaaatttcaaataagtcattttagttgataaactatttcaccattaccc 44041263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 91 - 212
Target Start/End: Original strand, 9770565 - 9770686
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaag 190  Q
    ||||| ||| |||||| |||| | |||||| || |||||||||| ||||||||||||  ||||||||||||||| ||||||||||||||| |||||||||    
T  9770565 tccttgtagattgacagaattcccaagttaatcatttaagtttcgaaagtttcaattaagtccttttagtttgagagaattctcaagttagtcatttaag 9770664  T
Q  191 tttcaaatagatcattttagtt 212  Q
    |||||||||| || ||||||||    
T  9770665 tttcaaataggtccttttagtt 9770686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 91 - 235
Target Start/End: Original strand, 23553359 - 23553512
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattt--- 187  Q
    |||||||||||||||| ||||   || ||  ||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||  || |||       
T  23553359 tccttttagtttgacagaattctcaacttgatcctttaagtttcgaaagtttcaattaggtccttttagtttgacaaaattctcaagttggtcttttaaa 23553458  T
Q  188 ------aagtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
          ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23553459 tttcaaaagtttcaaataggtcattttagttgataaactatttcaccgttaccc 23553512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 91 - 235
Target Start/End: Complemental strand, 25730252 - 25730098
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttc-aatttggtccttttagtttgacagaattctcaagttaatcattt-- 187  Q
    |||||||||||||| | |||||| |||||||||||||||||||  |||||||| |||| |||| ||||| ||||||||||||||||||||| || |||      
T  25730252 tccttttagtttgatagaatttccaagttagtcctttaagttttgaaagtttcaaattaggtcattttaatttgacagaattctcaagttagtcctttaa 25730153  T
Q  188 -------aagtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
           ||||||||||||  |||||||||||||||||||||||||| |||||||    
T  25730152 atttcaaaagtttcaaatatgtcattttagttgataaactatttcactgttaccc 25730098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 41 - 145
Target Start/End: Complemental strand, 9277102 - 9276998
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    ||||||||||||| || |||||||||| |||| | | ||| |||||||| |||||||||||||| | |||||| ||||||||||||||||||||||||||    
T  9277102 ttgacagaattcccaagttagtcttttaagtttcgaaagtttcaattagatccttttagtttgatagaatttccaagttagtcctttaagtttcaaaagt 9277003  T
Q  141 ttcaa 145  Q
    |||||    
T  9277002 ttcaa 9276998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 25737106 - 25737214
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||||||| |||||  ||||||||||||||||||||||||||||||| | | ||||||||||||||| ||||||  |||||| || ||||    
T  25737106 ggtccttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaaatagatccttttagtttgaccgaattcctaagttagtccttta 25737205  T
Q  189 agtttcaaa 197  Q
    | |||||||    
T  25737206 aatttcaaa 25737214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 93 - 235
Target Start/End: Complemental strand, 25737736 - 25737584
Alignment:
Q  93 cttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttc-aatttggtccttttagtttgacagaattctcaagttaatcattt---- 187  Q
    |||||||||||| | |||||| |||||||||||||||||||  |||||||| |||| |||| ||||| ||||||||||||||||||||| || |||        
T  25737736 cttttagtttgatagaatttccaagttagtcctttaagttttgaaagtttcaaattaggtctttttaatttgacagaattctcaagttagtcctttaaat 25737637  T
Q  188 -----aagtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
         ||||||||||||  |||||||||||||||||||||||||| |||||||    
T  25737636 ttcaaaagtttcaaatatttcattttagttgataaactatttcactgttaccc 25737584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 39701523 - 39701415
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||||||| ||||   |||||||| ||||||||||||||||||||||||  ||||||||||||||| ||||||| ||  ||| |||||||    
T  39701523 ggtccttttagtttgacagaattctcaagttagttctttaagtttcaaaagtttcaattaagtccttttagtttgatagaattcccagattagtcattta 39701424  T
Q  189 agtttcaaa 197  Q
    |||||||||    
T  39701423 agtttcaaa 39701415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 243 - 338
Target Start/End: Original strand, 8714037 - 8714132
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    |||||||||||||||||||||| |||||||||||   ||||||||||||||| || ||||||| ||||||||||||||||||||| ||||| ||||    
T  8714037 tagccgttaagttgttgacttgaatcaaaatgctactttttaaaagctccagggtatcaaaacactacgtttaatggtcacaaatgatcatttata 8714132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 82 - 197
Target Start/End: Original strand, 43422913 - 43423028
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaa 181  Q
    ||||||||||||||||| |||  ||||||| | ||||||||||||||||||||||||||||||| | |||| ||||||||||||| ||||  |||||||     
T  43422913 tcaattaggtccttttattttagcaaaattcccaagttagtcctttaagtttcaaaagtttcaaataggtcattttagtttgacaaaatttccaagttag 43423012  T
Q  182 tcatttaagtttcaaa 197  Q
    || ||||| |||||||    
T  43423013 tcctttaaatttcaaa 43423028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 94 - 235
Target Start/End: Complemental strand, 9277109 - 9276960
Alignment:
Q  94 ttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagttt 193  Q
    ||||||||||||| |||| | ||||||||| |||||||||| |||||||||||| | |||||||||||||| ||||||  ||||||| || |||||||||    
T  9277109 ttttagtttgacagaattcccaagttagtcttttaagtttcgaaagtttcaattagatccttttagtttgatagaatttccaagttagtcctttaagttt 9277010  T
Q  194 ---------caaatagatcattttagttgataaactatttcaccgttaccc 235  Q
             ||||||| || |||||||||||||||||||||||||||||||    
T  9277009 caaaagtttcaaataggtc-ttttagttgataaactatttcaccgttaccc 9276960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 243 - 332
Target Start/End: Original strand, 30576343 - 30576432
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatca 332  Q
    |||||||||||||||||||||| ||||||||| || |||||||||||||  | |||||||||| ||||||||||||||||||||| ||||    
T  30576343 tagccgttaagttgttgacttgaatcaaaatgttgccttttaaaagctcgggggtgtcaaaacactacgtttaatggtcacaaatgatca 30576432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 91 - 234
Target Start/End: Complemental strand, 8714482 - 8714330
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaag 190  Q
    |||||||||||||| | |||||| |||||||||||||||| |||||||||||||| | | | |||||||||||| ||||||| ||||||| |  ||||||    
T  8714482 tccttttagtttgatagaatttccaagttagtcctttaagattcaaaagtttcaaatagattcttttagtttgatagaattcgcaagttagttttttaag 8714383  T
Q  191 tttc---------aaatagatcattttagttgataaactatttcaccgttacc 234  Q
    ||||         |||||| || ||||||||||||||||||||||| ||||||    
T  8714382 tttctaaagttttaaataggtctttttagttgataaactatttcactgttacc 8714330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 40553429 - 40553321
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||||||| |||| |||| |||||||||| ||||| ||||||||||||  |||||||||||||||||| ||||   |||||| || ||||    
T  40553429 ggtccttttagtttgacataattcctaacttagtcctttgagtttaaaaagtttcaatcaggtccttttagtttgacaaaatttctaagttagtctttta 40553330  T
Q  189 agtttcaaa 197  Q
    |||||||||    
T  40553329 agtttcaaa 40553321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 243 - 322
Target Start/End: Original strand, 39701076 - 39701154
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtca 322  Q
    ||||||||||||||||||||| |||||||||| || ||||||||||||| || |||||||||||||||||||||||||||    
T  39701076 tagccgttaagttgttgactt-tatcaaaatgttgccttttaaaagctcgagtgtgtcaaaacgctacgtttaatggtca 39701154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 247 - 333
Target Start/End: Complemental strand, 39701330 - 39701243
Alignment:
Q  247 cgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctc-cagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    |||||||||||||||||| ||||||||||||||||||||||||||  || ||||||||| | |||||||||| |||||||||||||||    
T  39701330 cgttaagttgttgacttggatcaaaatgctgtcttttaaaagctctaagggtgtcaaaatgttacgtttaatcgtcacaaattatcat 39701243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 90 - 197
Target Start/End: Complemental strand, 45018048 - 45017943
Alignment:
Q  90 gtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaa 189  Q
    ||||||||||||||||||||| |  |||||||||||||||||||| ||||||| |||| |||||||||||||||||| | ||| ||||||| || |||||    
T  45018048 gtccttttagtttgacaaaatcttcaagttagtcctttaagtttcgaaagttttaattaggtccttttagtttgaca-agttc-caagttagtcctttaa 45017951  T
Q  190 gtttcaaa 197  Q
    ||||||||    
T  45017950 gtttcaaa 45017943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 243 - 333
Target Start/End: Original strand, 23553546 - 23553636
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    |||||||||| ||||||||||| ||||||| |  |||||||||||||||||| ||||||||||| |||||||||| ||||||||| |||||    
T  23553546 tagccgttaaattgttgacttggatcaaaacgtcgtcttttaaaagctccagggtgtcaaaacgttacgtttaatcgtcacaaatgatcat 23553636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 89 - 230
Target Start/End: Complemental strand, 29794388 - 29794238
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||| ||||||||||||| |||| | ||||||||||||||| |||| |||||||  ||| |||||||||||||||||| ||||  ||||||| || ||||    
T  29794388 ggtcattttagtttgacagaattcccaagttagtcctttaaatttcgaaagttttcattaggtccttttagtttgacataatttccaagttagtctttta 29794289  T
Q  189 agttt---------caaatagatcattttagttgataaactatttcaccgt 230  Q
    |||||         |||||||||| |||||||||||||| |||||||||||    
T  29794288 agtttcaaaagtttcaaatagatccttttagttgataaattatttcaccgt 29794238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 89 - 230
Target Start/End: Original strand, 45017749 - 45017899
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||||| | |||| | |||||||||||||||||||| ||||||||||||  ||| ||||||||| ||||||||| ||| ||| || ||||    
T  45017749 ggtccttttagtttgatagaattcccaagttagtcctttaagtttcgaaagtttcaattatgtcattttagtttaacagaattcccaaattagtccttta 45017848  T
Q  189 ag---------tttcaaatagatcattttagttgataaactatttcaccgt 230  Q
    ||         |||||||||  |||||||| ||||||||||||||||||||    
T  45017849 agattcaaaaatttcaaataagtcattttaattgataaactatttcaccgt 45017899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 41 - 142
Target Start/End: Complemental strand, 30576778 - 30576677
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    |||||||||||   || |||||||| | |||| ||| ||| ||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||    
T  30576778 ttgacagaattttcaagttagtcttctaagtttcaaaagtttcaattaggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagt 30576679  T
Q  141 tt 142  Q
    ||    
T  30576678 tt 30576677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 85 - 161
Target Start/End: Complemental strand, 29794332 - 29794256
Alignment:
Q  85 attaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    |||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||| | | |||||||||||    
T  29794332 attaggtccttttagtttgacataatttccaagttagtcttttaagtttcaaaagtttcaaatagatccttttagtt 29794256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 43423222 - 43423115
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||||||| |||| ||||||||||  |||||||||| ||||||||||||  || |||||||||| | ||||||||||| ||| || ||||    
T  43423222 ggtccttttagtttgacataattcctaagttagttatttaagtttcgaaagtttcaattaagt-cttttagtttcatagaattctcaatttactccttta 43423124  T
Q  189 agtttcaaa 197  Q
    |||||||||    
T  43423123 agtttcaaa 43423115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 89 - 234
Target Start/End: Original strand, 9276484 - 9276639
Alignment:
Q  89 ggtccttttagtttgacaaaatt-tctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattt 187  Q
    ||||||||||||||||||||||| || || |   || |||||||||  |||||||||||| |||| || |||||||||||||||||||||||| ||| ||    
T  9276484 ggtccttttagtttgacaaaattctcaaaatagttcttttaagttttgaaagtttcaattaggtctttatagtttgacagaattctcaagttagtcagtt 9276583  T
Q  188 ---------aagtttcaaatagatcattttagttgataaactatttcaccgttacc 234  Q
             ||||||||||||| || ||||||||||||||||||||||| ||||||    
T  9276584 aagttttaaaagtttcaaataggtccttttagttgataaactatttcactgttacc 9276639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 91 - 193
Target Start/End: Original strand, 39700828 - 39700931
Alignment:
Q  91 tccttttagttt-gacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaa 189  Q
    |||||||||||| |||||||||  || ||||||| |||||||||  |||||||||||| |||||||||||||||||| |||||| |||||| || |||||    
T  39700828 tccttttagttttgacaaaattcttatgttagtcttttaagttttgaaagtttcaattaggtccttttagtttgacaaaattcttaagttagtcctttaa 39700927  T
Q  190 gttt 193  Q
    ||||    
T  39700928 gttt 39700931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 247 - 333
Target Start/End: Complemental strand, 14871294 - 14871208
Alignment:
Q  247 cgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    |||||||||||||||||| ||||||| | || |||||||||||| ||| ||||| |||| ||||||||||||||||||||| |||||    
T  14871294 cgttaagttgttgacttggatcaaaacgatgccttttaaaagcttcagggtgtcgaaactctacgtttaatggtcacaaatgatcat 14871208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 243 - 333
Target Start/End: Complemental strand, 30576601 - 30576511
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    |||||||||||||||||||||| |||||||   || |||||||||||||||| ||||||||||| |||||||||| |||||| || |||||    
T  30576601 tagccgttaagttgttgacttggatcaaaacattgccttttaaaagctccagggtgtcaaaacgttacgtttaatcgtcacagatgatcat 30576511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 248 - 333
Target Start/End: Original strand, 14871109 - 14871194
Alignment:
Q  248 gttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    ||||||||||||||||| ||||||| | ||  ||||||||||| ||| ||||||||||| |||||||||||||||||||| |||||    
T  14871109 gttaagttgttgacttggatcaaaacgttggattttaaaagcttcagggtgtcaaaacgttacgtttaatggtcacaaatgatcat 14871194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 249 - 338
Target Start/End: Complemental strand, 23553803 - 23553715
Alignment:
Q  249 ttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    |||||||||||||||| ||||||||| ||| |||||||||||| || |||||||||| || |||||||||||||||||| ||||| ||||    
T  23553803 ttaagttgttgacttggatcaaaatgatgt-ttttaaaagctcgagggtgtcaaaacacttcgtttaatggtcacaaatgatcatttata 23553715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 90 - 179
Target Start/End: Complemental strand, 29792647 - 29792558
Alignment:
Q  90 gtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagtt 179  Q
    ||||||||||||||||| |||| | || |||||||||||| |||| |||||||| ||| | |||||||||||||||| ||||||||||||    
T  29792647 gtccttttagtttgacagaattcccaaattagtcctttaaatttcgaaagtttctattagatccttttagtttgacataattctcaagtt 29792558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 89 - 237
Target Start/End: Complemental strand, 31169614 - 31169458
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattt- 187  Q
    |||| ||||||||||||||||||   |||||||||||||||||||  |||||||||| | | || ||||||||||||  ||||||||| ||| || |||     
T  31169614 ggtcattttagtttgacaaaattctcaagttagtcctttaagttt-taaagtttcaaatagatcattttagtttgacgaaattctcaaattagtccttta 31169516  T
Q  188 --------aagtttcaaatagatcattttagttgataaactatttcaccgttacccgt 237  Q
            ||||||||||||  ||||||||||||||||| ||||||||||||||||||    
T  31169515 agttttaaaagtttcaaatatgtcattttagttgataaaatatttcaccgttacccgt 31169458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 4613742 - 4613850
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||||| | |||||  |||||| |||||||| |||  ||||||||||||  ||||||||||||||||| |||| || ||||| || ||||    
T  4613742 ggtccttttagtttgaaagaattttcaagttaatcctttaaattttgaaagtttcaattaagtccttttagtttgacaaaattttcgagttagtccttta 4613841  T
Q  189 agtttcaaa 197  Q
    |||||||||    
T  4613842 agtttcaaa 4613850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 82 - 162
Target Start/End: Original strand, 4613795 - 4613875
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagttt 162  Q
    ||||||| |||||||||||||||||||||||   |||||||||||||||||||||||||||||| | | | ||||||||||    
T  4613795 tcaattaagtccttttagtttgacaaaattttcgagttagtcctttaagtttcaaaagtttcaaatagattcttttagttt 4613875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 243 - 327
Target Start/End: Complemental strand, 8714294 - 8714210
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaat 327  Q
    ||||||||||||| |||||||| ||||||| |||| |||||||||||||||| ||  ||||||| ||||||||||||||| ||||    
T  8714294 tagccgttaagttattgacttggatcaaaacgctgccttttaaaagctccagggtcacaaaacgttacgtttaatggtcaaaaat 8714210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 9770904 - 9770784
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    |||||| |||||  || |||||| ||| |||| | | ||| ||||||| ||| ||||||||||||| |||| | ||||||||||||||| ||||||||||    
T  9770904 ttgacaaaattctcaagttagtcctttaagtttcgaaagtttcaattaagtcattttagtttgacagaattcccaagttagtcctttaattttcaaaagt 9770805  T
Q  141 ttcaatttggtccttttagtt 161  Q
    ||||| | |||||||||||||    
T  9770804 ttcaaataggtccttttagtt 9770784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 30576166 - 30576286
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    ||||||||||||| || |||||| ||| | ||   | ||| ||||||| |||||||||||||| || |||||| ||||||||| ||||||||| ||||||    
T  30576166 ttgacagaattcccaagttagtcctttaaattttgaaagtttcaattaagtccttttagtttgccagaatttccaagttagtcttttaagtttgaaaagt 30576265  T
Q  141 ttcaatttggtccttttagtt 161  Q
    ||||| |||||| ||||||||    
T  30576266 ttcaaattggtctttttagtt 30576286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 89 - 169
Target Start/End: Complemental strand, 36314777 - 36314697
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaa 169  Q
    |||||||||||||||||||||||   ||||||||| ||||| |||| ||||||||||||  ||||||||||||||||||||    
T  36314777 ggtccttttagtttgacaaaattatcaagttagtcttttaaatttcgaaagtttcaattatgtccttttagtttgacagaa 36314697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 36359915 - 36360035
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    ||||||||||| | || |||||| ||| |||| | | ||| ||||||||||  ||||||||||||| |||| | ||||||||||||||||||| ||||||    
T  36359915 ttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtatttttagtttgacagaattcccaagttagtcctttaagttttaaaagt 36360014  T
Q  141 ttcaatttggtccttttagtt 161  Q
    ||||| | |||| ||||||||    
T  36360015 ttcaaataggtcattttagtt 36360035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 41 - 145
Target Start/End: Complemental strand, 36360193 - 36360089
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    ||||||||||| | || |||||||||| |||| | | ||| |||| || ||| ||||| |||||||||||| | ||||||||||||||||||||||||||    
T  36360193 ttgacagaatttccaagttagtcttttaagtttcgaaagtttcaaataagtctttttaatttgacaaaattgccaagttagtcctttaagtttcaaaagt 36360094  T
Q  141 ttcaa 145  Q
    |||||    
T  36360093 ttcaa 36360089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 36360205 - 36360097
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||| ||||||||||||| |||||| ||||||||| |||||||||| |||||||||| |  ||| ||||| ||||||| ||||  ||||||| || ||||    
T  36360205 ggtcattttagtttgacagaatttccaagttagtcttttaagtttcgaaagtttcaaataagtctttttaatttgacaaaattgccaagttagtccttta 36360106  T
Q  189 agtttcaaa 197  Q
    |||||||||    
T  36360105 agtttcaaa 36360097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 247 - 326
Target Start/End: Complemental strand, 6236175 - 6236096
Alignment:
Q  247 cgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaa 326  Q
    |||||||||||||||||  ||||||| ||||||||||||| | | ||| ||||||||| |||||||||||||||||||||    
T  6236175 cgttaagttgttgacttagatcaaaacgctgtcttttaaatgtttcagggtgtcaaaatgctacgtttaatggtcacaaa 6236096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 155 - 233
Target Start/End: Complemental strand, 5359125 - 5359047
Alignment:
Q  155 tttagtttgacagaattctcaagttaatcatttaagtttcaaatagatcattttagttgataaactatttcaccgttac 233  Q
    ||||||||||||||||| |||| |||||| ||||||||| ||||| | | |||||||||||||| ||||||||||||||    
T  5359125 tttagtttgacagaattatcaaattaatcctttaagttttaaatacaccgttttagttgataaattatttcaccgttac 5359047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 248 - 318
Target Start/End: Complemental strand, 44041224 - 44041154
Alignment:
Q  248 gttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatg 318  Q
    ||||||| ||||||||| |||||||||||  |||||||||||| ||| |||||||||||||||||||||||    
T  44041224 gttaagtagttgacttggatcaaaatgctaccttttaaaagcttcagggtgtcaaaacgctacgtttaatg 44041154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 48 - 137
Target Start/End: Original strand, 43422939 - 43423028
Alignment:
Q  48 aattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaa 137  Q
    |||||| || |||||| ||| |||| ||| ||| |||| |||||| |||||||||||||||||||| ||||||||||||||| |||||||    
T  43422939 aattcccaagttagtcctttaagtttcaaaagtttcaaataggtcattttagtttgacaaaatttccaagttagtcctttaaatttcaaa 43423028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 249 - 333
Target Start/End: Complemental strand, 5359005 - 5358921
Alignment:
Q  249 ttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    |||||||||||||||  ||||||| |||| |||||||||||||||||||||| |||| ||| ||||||| | ||||||| |||||    
T  5359005 ttaagttgttgactttgatcaaaaagctgccttttaaaagctccagagtgtcgaaacactatgtttaattgccacaaatgatcat 5358921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 137
Target Start/End: Original strand, 11113565 - 11113661
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaa 137  Q
    |||||| ||||||||| |||||| ||| | ||   | ||| ||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  11113565 ttgacataattcctaagttagtcctttaaattttgaaagtttcaatcaggtccttttagtttgacagaatttccaagttagtcctttaagtttcaaa 11113661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 23553369 - 23553489
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    ||||||||||||  |||||  || ||| |||| | | ||| ||||||||||||||||||||||||||||||   ||||| ||| ||||| ||||||||||    
T  23553369 ttgacagaattctcaacttgatcctttaagtttcgaaagtttcaattaggtccttttagtttgacaaaattctcaagttggtcttttaaatttcaaaagt 23553468  T
Q  141 ttcaatttggtccttttagtt 161  Q
    ||||| | |||| ||||||||    
T  23553469 ttcaaataggtcattttagtt 23553489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 193
Target Start/End: Original strand, 30576154 - 30576258
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||| |||||| |||||| |||| | ||||||||||||||| |||  ||||||||||||  |||||||||||||| |||||||  ||||||| || ||||    
T  30576154 ggtctttttagcttgacagaattcccaagttagtcctttaaattttgaaagtttcaattaagtccttttagtttgccagaatttccaagttagtctttta 30576253  T
Q  189 agttt 193  Q
    |||||    
T  30576254 agttt 30576258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 35434400 - 35434344
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    |||||||||||||||||| |||| |||||||| ||||||||||||||||||||||||    
T  35434400 ggtccttttagtttgacataattcctaagttaatcctttaagtttcaaaagtttcaa 35434344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 41190397 - 41190293
Alignment:
Q  93 cttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtt 192  Q
    |||||||||||||| ||||   || ||||| |||||| |||| ||| |||||||| |||| ||||||||||| |||||||||||  || |||||||||||    
T  41190397 cttttagtttgacagaattctcaaattagttctttaaatttcgaaaatttcaattaggtcattttagtttgatagaattctcaatctagtcatttaagtt 41190298  T
Q  193 tcaaa 197  Q
    |||||    
T  41190297 tcaaa 41190293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 82 - 145
Target Start/End: Original strand, 9770667 - 9770730
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    |||| |||||||||||||||||||| |||| | |||||||||||||||||||||||| ||||||    
T  9770667 tcaaataggtccttttagtttgacagaattccgaagttagtcctttaagtttcaaaaatttcaa 9770730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 82 - 161
Target Start/End: Original strand, 16197084 - 16197163
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    ||||||| ||||||||||||||||| |||| | |||||| || |||||||||||||||| |||| | |||||||||||||    
T  16197084 tcaattatgtccttttagtttgacagaattcccaagttaatcatttaagtttcaaaagtatcaaataggtccttttagtt 16197163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 161
Target Start/End: Original strand, 5358647 - 5358717
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    |||||||||||||||| |||||  |||||||||||| ||||||||||||||| || | |||||||||||||    
T  5358647 tccttttagtttgacagaattttcaagttagtccttcaagtttcaaaagttttaaataggtccttttagtt 5358717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 333
Target Start/End: Complemental strand, 9276932 - 9276842
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    ||||| |||||||||||||||| | ||||| |||  |||||||||||||||| |||| |||||| ||||||||||  |||||||| |||||    
T  9276932 tagccattaagttgttgacttggagcaaaacgctaccttttaaaagctccagggtgttaaaacgttacgtttaatcatcacaaatgatcat 9276842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 260 - 338
Target Start/End: Original strand, 12684797 - 12684875
Alignment:
Q  260 acttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    ||||| ||||||||| ||| ||||||||||||||| ||||||| ||||| | ||||||||||| |||||||||| ||||    
T  12684797 acttggatcaaaatgatgtgttttaaaagctccagggtgtcaagacgctgcatttaatggtcataaattatcatttata 12684875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 58 - 144
Target Start/End: Original strand, 25737135 - 25737221
Alignment:
Q  58 ttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttca 144  Q
    |||||| ||| |||| ||| ||| |||| ||| |||||||||||||||  |||| ||||||||||||||||| ||||||||||||||    
T  25737135 ttagtcctttaagtttcaaaagtttcaaatagatccttttagtttgaccgaattcctaagttagtcctttaaatttcaaaagtttca 25737221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 41 - 137
Target Start/End: Complemental strand, 14871466 - 14871369
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttag-tttgacaaaatttctaagttagtcctttaagtttcaaa 137  Q
    |||||||||||||||| |||||||||| |||| | | ||| |||||||||| ||||||| ||||||| ||||   || ||||||||||||||||||||    
T  14871466 ttgacagaattcctaagttagtcttttaagtttcgaaagtttcaattaggttcttttagttttgacataattctcaaattagtcctttaagtttcaaa 14871369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 248 - 333
Target Start/End: Complemental strand, 16197472 - 16197387
Alignment:
Q  248 gttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    ||||||||||||||||  ||||||| | || |||||||||| | ||  ||||||||||| |||||||||||||||||||| |||||    
T  16197472 gttaagttgttgacttagatcaaaacgttgccttttaaaagtttcaaggtgtcaaaacgttacgtttaatggtcacaaatgatcat 16197387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 93 - 235
Target Start/End: Complemental strand, 23553994 - 23553843
Alignment:
Q  93 cttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagtta----atca--tt 186  Q
    |||||||||||||| ||||   ||||||||| |||||||||| || |||| ||||  ||| ||||||||||| |||||||||||||||     |||  ||    
T  23553994 cttttagtttgacagaattctaaagttagtcttttaagtttcgaatgttttaattaagtcattttagtttgatagaattctcaagttagttcctcaagtt 23553895  T
Q  187 t---aagtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    |   |||||||||||||||||| |||||| ||||| |||||||| |||||||    
T  23553894 tcaaaagtttcaaatagatcatgttagttaataaattatttcactgttaccc 23553843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 29030248 - 29030175
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagttt 162  Q
    |||| ||||||||||||| |||| || ||||| ||||||||||||| ||||||||||||  |||||||||||||    
T  29030248 ggtcattttagtttgacataattccttagttattcctttaagtttcgaaagtttcaattaagtccttttagttt 29030175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 249 - 333
Target Start/End: Original strand, 6235927 - 6236011
Alignment:
Q  249 ttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    |||||||||||||||| ||||||| | ||  |||||||||||| || || |||||| | |||||||||||||||||||| |||||    
T  6235927 ttaagttgttgacttggatcaaaacgttgcattttaaaagctctagggtatcaaaatgttacgtttaatggtcacaaatgatcat 6236011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 197
Target Start/End: Original strand, 9770575 - 9770722
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    ||||||||||||| || ||| || ||| |||| | | ||| ||||||| ||||||||||||||| | ||||   ||||||||| |||||||||||||       
T  9770575 ttgacagaattcccaagttaatcatttaagtttcgaaagtttcaattaagtccttttagtttgagagaattctcaagttagtcatttaagtttcaaa--- 9770671  T
Q  141 ttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
          | ||||||||||||||||||||||||  |||||| || |||||||||||||    
T  9770672 ------taggtccttttagtttgacagaattccgaagttagtcctttaagtttcaaa 9770722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 13771937 - 13771881
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    |||| ||||||||||||| |||| | |||||||||||||||||||||||||||||||    
T  13771937 ggtcattttagtttgacataattcccaagttagtcctttaagtttcaaaagtttcaa 13771881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 39701511 - 39701391
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    ||||||||||||  || |||||  ||| |||| ||| ||| ||||||| ||||||||||||||| | |||| | |  |||||| |||||||||||||| |    
T  39701511 ttgacagaattctcaagttagttctttaagtttcaaaagtttcaattaagtccttttagtttgatagaattcccagattagtcatttaagtttcaaaact 39701412  T
Q  141 ttcaatttggtccttttagtt 161  Q
    ||||| | |||||||||||||    
T  39701411 ttcaaataggtccttttagtt 39701391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 43422864 - 43422968
Alignment:
Q  93 cttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtt 192  Q
    |||||||||||| | ||||   || ||||||||||||||||  |||||||||||| |||||||||| |||  || ||||| ||||||| || ||||||||    
T  43422864 cttttagtttgatataattctcaaattagtcctttaagttttgaaagtttcaattaggtccttttattttagcaaaattcccaagttagtcctttaagtt 43422963  T
Q  193 tcaaa 197  Q
    |||||    
T  43422964 tcaaa 43422968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 197
Target Start/End: Original strand, 8713845 - 8713896
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    ||||||||||||||||||||| ||||||||||||| || |||||||||||||    
T  8713845 tttggtccttttagtttgacataattctcaagttagtcctttaagtttcaaa 8713896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 338
Target Start/End: Original strand, 9276674 - 9276769
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    ||||| |||||||||||||||| ||||||||| || |||||||||| || ||  |||||||||| || |||||  |||||||||| ||||| ||||    
T  9276674 tagcctttaagttgttgacttggatcaaaatgatgccttttaaaagttcgaggatgtcaaaacgttatgtttagcggtcacaaatgatcatttata 9276769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 39701526 - 39701475
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    ||||||||||||||||||||||||||||||||||| |  |||||||||||||    
T  39701526 tttggtccttttagtttgacagaattctcaagttagttctttaagtttcaaa 39701475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 180
Target Start/End: Complemental strand, 43423210 - 43423072
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    |||||| ||||||||| |||||  ||| |||| | | ||| ||||||| ||| ||||||||| | | ||||   || ||| |||||||||||||||||||    
T  43423210 ttgacataattcctaagttagttatttaagtttcgaaagtttcaattaagtc-ttttagtttcatagaattctcaatttactcctttaagtttcaaaagt 43423112  T
Q  141 ttcaatttggtccttttagtttgacagaattctcaagtta 180  Q
    ||||| | |||| ||||||||||||| ||||| |||||||    
T  43423111 ttcaaataggtcattttagtttgacaaaattcccaagtta 43423072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 145
Target Start/End: Complemental strand, 44041365 - 44041302
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    ||||||| ||||||||||||||||| |||| ||||||||||| || ||||||||||| ||||||    
T  44041365 tcaattatgtccttttagtttgacagaattcctaagttagtctttaaagtttcaaaaatttcaa 44041302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 248 - 338
Target Start/End: Complemental strand, 34686834 - 34686744
Alignment:
Q  248 gttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    ||||||||| ||| ||| ||||||||| ||  ||||||| ||| ||| |||||||||||||| |||||||||||| |||| ||||| ||||    
T  34686834 gttaagttgctgatttggatcaaaatgttgcattttaaatgcttcagggtgtcaaaacgctaggtttaatggtcaaaaatgatcatttata 34686744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 146 - 235
Target Start/End: Original strand, 35433896 - 35433994
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc---------aaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    ||||||||||||| ||||| ||||||| ||||||| |||||||||||||         ||||||||| |||||||||||||| |||||||| |||||||    
T  35433896 tttggtccttttaatttgatagaattcacaagttagtcatttaagtttcaaaagttttaaatagatctttttagttgataaattatttcactgttaccc 35433994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 45017994 - 45017935
Alignment:
Q  84 aattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    ||||||||||||||||||||||||   ||| |||||||||||||||||||||||| ||||||    
T  45017994 aattaggtccttttagtttgacaag--ttccaagttagtcctttaagtttcaaaaatttcaa 45017935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 41 - 145
Target Start/End: Original strand, 8713860 - 8713964
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    |||||| |||||  || |||||| ||| |||| ||| ||| |||||||  | |||||||||||||||||||   ||||||||| |||||||||||||| |    
T  8713860 ttgacataattctcaagttagtcctttaagtttcaaaagtttcaattaaattcttttagtttgacaaaattcacaagttagtcttttaagtttcaaaaat 8713959  T
Q  141 ttcaa 145  Q
    |||||    
T  8713960 ttcaa 8713964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 9770919 - 9770871
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    ||||||||||||||||||||| ||||||||||||| || ||||||||||    
T  9770919 tttggtccttttagtttgacaaaattctcaagttagtcctttaagtttc 9770871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 25737102 - 25737154
Alignment:
Q  145 atttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    |||||||||||||||||||||| |||| |||||||| || |||||||||||||    
T  25737102 atttggtccttttagtttgacataattttcaagttagtcctttaagtttcaaa 25737154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 161
Target Start/End: Original strand, 9276538 - 9276617
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    ||||||||||| || |||||||||| ||||   |||||||||  |||||||| ||||||||||| | |||||||||||||    
T  9276538 tcaattaggtctttatagtttgacagaattctcaagttagtcagttaagttttaaaagtttcaaataggtccttttagtt 9276617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #90
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 154 - 228
Target Start/End: Original strand, 13771425 - 13771508
Alignment:
Q  154 ttttagtttgacagaattctcaagttaatcatttaagt---------ttcaaatagatcattttagttgataaactatttcacc 228  Q
    |||||||||||||||||| |||||||| ||||||||||         |||||||||||  ||||||||||||||||||||||||    
T  13771425 ttttagtttgacagaattttcaagttagtcatttaagttttaaaagtttcaaatagattcttttagttgataaactatttcacc 13771508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #91
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 338
Target Start/End: Original strand, 16197220 - 16197314
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    |||| ||||| ||||||||||| ||||||||  || |||||||||||| ||  |||||||||||||   |||||||||||||||| ||||| ||||    
T  16197220 tagctgttaaattgttgacttggatcaaaatattgccttttaaaagcttcaaggtgtcaaaacgct-tatttaatggtcacaaatgatcatttata 16197314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #92
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 23179049 - 23179096
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaa 136  Q
    |||||||||||||||||| |||| | ||||||||||||||||||||||    
T  23179049 ggtccttttagtttgacagaattcccaagttagtcctttaagtttcaa 23179096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #93
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 35434403 - 35434352
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    ||||||||||||||||||||| |||||  ||||||||| |||||||||||||    
T  35434403 tttggtccttttagtttgacataattcctaagttaatcctttaagtttcaaa 35434352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #94
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 234
Target Start/End: Original strand, 6235840 - 6235886
Alignment:
Q  188 aagtttcaaatagatcattttagttgataaactatttcaccgttacc 234  Q
    ||||||||||||||  ||||||||||||||||||||||||| |||||    
T  6235840 aagtttcaaatagactattttagttgataaactatttcacctttacc 6235886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #95
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 233
Target Start/End: Complemental strand, 34686969 - 34686875
Alignment:
Q  148 tggtccttttagtttgacagaattctcaagttaatcatttaa---------gtttcaaatagatcattttagttgataaactatttcaccgttac 233  Q
    ||||||||||| |||||||||||| |||||||| || |||||         |||| |||||| || |||||||||||||||||||||||||||||    
T  34686969 tggtccttttaatttgacagaattatcaagttagtcctttaaattttaaaagttttaaataggtccttttagttgataaactatttcaccgttac 34686875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #96
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 327
Target Start/End: Original strand, 44040963 - 44041037
Alignment:
Q  253 gttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaat 327  Q
    |||||||| ||||||||||| | || |||||||||||||||  ||||||||| | ||| ||||||||| ||||||    
T  44040963 gttgttgagttgtatcaaaacgttgccttttaaaagctccaaggtgtcaaaatgttacatttaatggtgacaaat 44041037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #97
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 333
Target Start/End: Original strand, 4613932 - 4614021
Alignment:
Q  244 agccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    ||||||||||||||||||||| ||||||||  ||  ||||||||| | ||  ||||||||||| |  ||||||| ||||||||| |||||    
T  4613932 agccgttaagttgttgacttgaatcaaaatattgcattttaaaagttacaaggtgtcaaaacgttgtgtttaatcgtcacaaatgatcat 4614021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #98
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 25730198 - 25730137
Alignment:
Q  84 aattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    ||||||||| ||||| ||||||| ||||   ||||||||||||||| |||||||||||||||    
T  25730198 aattaggtcattttaatttgacagaattctcaagttagtcctttaaatttcaaaagtttcaa 25730137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #99
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 25737684 - 25737623
Alignment:
Q  84 aattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    ||||||||| ||||| ||||||| ||||   ||||||||||||||| |||||||||||||||    
T  25737684 aattaggtctttttaatttgacagaattctcaagttagtcctttaaatttcaaaagtttcaa 25737623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #100
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 189
Target Start/End: Original strand, 4613738 - 4613782
Alignment:
Q  145 atttggtccttttagtttgacagaattctcaagttaatcatttaa 189  Q
    |||||||||||||||||||| |||||| ||||||||||| |||||    
T  4613738 atttggtccttttagtttgaaagaattttcaagttaatcctttaa 4613782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #101
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 137
Target Start/End: Complemental strand, 6236319 - 6236251
Alignment:
Q  69 agttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaa 137  Q
    |||| ||| ||| ||||||||||||||||| ||||||| | || | |||||||| ||||||||||||||    
T  6236319 agtttcaatagtttcaattaggtccttttaatttgacagacttcccaagttagtactttaagtttcaaa 6236251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #102
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 9770560 - 9770608
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    |||| ||||| ||| |||||||||||| |||||||||||||||||||||    
T  9770560 tttgctccttgtagattgacagaattcccaagttaatcatttaagtttc 9770608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #103
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 23553354 - 23553402
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    |||| |||||||||||||||||||||||||| || ||| ||||||||||    
T  23553354 tttgatccttttagtttgacagaattctcaacttgatcctttaagtttc 23553402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #104
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 34686968 - 34686896
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    |||||||||| ||||||| ||||   ||||||||||||||| ||| |||||||| || | |||||||||||||    
T  34686968 ggtccttttaatttgacagaattatcaagttagtcctttaaattttaaaagttttaaataggtccttttagtt 34686896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #105
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 232
Target Start/End: Original strand, 44040872 - 44040916
Alignment:
Q  188 aagtttcaaatagatcattttagttgataaactatttcaccgtta 232  Q
    |||||| |||||| |||||||||||||||||||||||||| ||||    
T  44040872 aagttttaaataggtcattttagttgataaactatttcactgtta 44040916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #106
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 45017746 - 45017794
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    ||||||||||||||||||| ||||||| ||||||| || ||||||||||    
T  45017746 tttggtccttttagtttgatagaattcccaagttagtcctttaagtttc 45017794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #107
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 145
Target Start/End: Original strand, 45017761 - 45017865
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    |||| |||||||| || |||||| ||| |||| | | ||| ||||||| ||| ||||||||| ||| |||| | || ||||||||||||| ||||||| |    
T  45017761 ttgatagaattcccaagttagtcctttaagtttcgaaagtttcaattatgtcattttagtttaacagaattcccaaattagtcctttaagattcaaaaat 45017860  T
Q  141 ttcaa 145  Q
    |||||    
T  45017861 ttcaa 45017865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #108
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 13771425 - 13771476
Alignment:
Q  94 ttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    ||||||||||||| |||||  ||||||||| ||||||||| |||||||||||    
T  13771425 ttttagtttgacagaattttcaagttagtcatttaagttttaaaagtttcaa 13771476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #109
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 13771940 - 13771889
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    ||||||| ||||||||||||| ||||| ||||||| || |||||||||||||    
T  13771940 tttggtcattttagtttgacataattcccaagttagtcctttaagtttcaaa 13771889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #110
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 161
Target Start/End: Complemental strand, 16208755 - 16208688
Alignment:
Q  94 ttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    ||||||||| | | |||||  ||||||||||||| ||||||||||||||||| |  ||||||||||||    
T  16208755 ttttagttttatagaattttcaagttagtcctttgagtttcaaaagtttcaaatatgtccttttagtt 16208688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #111
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 30576793 - 30576742
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    |||| ||||||||||||||||||||| |||||||| || | |||||||||||    
T  30576793 tttgatccttttagtttgacagaattttcaagttagtcttctaagtttcaaa 30576742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #112
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 193
Target Start/End: Complemental strand, 31169617 - 31169570
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagttt 193  Q
    ||||||| ||||||||||||| ||||||||||||| || |||||||||    
T  31169617 tttggtcattttagtttgacaaaattctcaagttagtcctttaagttt 31169570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #113
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 147 - 194
Target Start/End: Original strand, 36359901 - 36359948
Alignment:
Q  147 ttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    |||||||||||||||||||||||||  ||||||| || ||||||||||    
T  36359901 ttggtccttttagtttgacagaatttccaagttagtcctttaagtttc 36359948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #114
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 197
Target Start/End: Original strand, 40552769 - 40552872
Alignment:
Q  94 ttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagttt 193  Q
    ||||||||||||| |||||  |||||| || ||||| |||  ||||||||||||  |   ||||||||||||| |||| ||||||||  ||||||| |||    
T  40552769 ttttagtttgacagaattttcaagttaatcatttaaattttgaaagtttcaattaagatattttagtttgacaaaattttcaagttagccatttaaattt 40552868  T
Q  194 caaa 197  Q
    ||||    
T  40552869 caaa 40552872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #115
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 197
Target Start/End: Original strand, 5358647 - 5358693
Alignment:
Q  151 tccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    ||||||||||||||||||||| |||||||| || || ||||||||||    
T  5358647 tccttttagtttgacagaattttcaagttagtccttcaagtttcaaa 5358693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #116
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 293
Target Start/End: Complemental strand, 25730060 - 25730014
Alignment:
Q  247 cgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctcca 293  Q
    |||||||||||||||||| ||||||||| |  |||||||||||||||    
T  25730060 cgttaagttgttgacttggatcaaaatgttaccttttaaaagctcca 25730014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #117
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 293
Target Start/End: Complemental strand, 25737546 - 25737500
Alignment:
Q  247 cgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctcca 293  Q
    |||||||||||||||||| ||||||||| |  |||||||||||||||    
T  25737546 cgttaagttgttgacttggatcaaaatgttaccttttaaaagctcca 25737500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #118
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 322
Target Start/End: Complemental strand, 31169420 - 31169349
Alignment:
Q  249 ttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtca 322  Q
    |||||||||||||||| ||||||| | | ||||||||||||| ||| ||||||||| | |||||||||| ||||    
T  31169420 ttaagttgttgacttggatcaaaacgttatcttttaaaagct-cag-gtgtcaaaatgttacgtttaatcgtca 31169349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #119
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 326
Target Start/End: Complemental strand, 35434269 - 35434188
Alignment:
Q  245 gccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaa 326  Q
    |||||||||||| ||||||| |||||||  |||  |||||||  || ||| |||||||| || | |||||||||||||||||    
T  35434269 gccgttaagttgctgacttggatcaaaactctgcgttttaaagtcttcagtgtgtcaaatcgatgcgtttaatggtcacaaa 35434188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #120
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 14871481 - 14871433
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    ||||||||||| |||||||||||||||  |||||| || ||||||||||    
T  14871481 tttggtcctttaagtttgacagaattcctaagttagtcttttaagtttc 14871433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #121
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 16197028 - 16197076
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    |||||||||||| ||||||||||||| |||||||| ||  |||||||||    
T  16197028 tttggtccttttcgtttgacagaattatcaagttagtccattaagtttc 16197076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #122
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 29794391 - 29794343
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    ||||||| ||||||||||||||||||| ||||||| || ||||| ||||    
T  29794391 tttggtcattttagtttgacagaattcccaagttagtcctttaaatttc 29794343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #123
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 36314780 - 36314732
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    ||||||||||||||||||||| |||| |||||||| || ||||| ||||    
T  36314780 tttggtccttttagtttgacaaaattatcaagttagtcttttaaatttc 36314732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #124
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 36360208 - 36360160
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    ||||||| ||||||||||||||||||  ||||||| || ||||||||||    
T  36360208 tttggtcattttagtttgacagaatttccaagttagtcttttaagtttc 36360160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #125
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 129
Target Start/End: Complemental strand, 43423123 - 43423063
Alignment:
Q  69 agttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaa 129  Q
    |||| ||| ||| |||| |||||| |||||||||||||||||| | |||||||| ||||||    
T  43423123 agtttcaaaagtttcaaataggtcattttagtttgacaaaattcccaagttagtactttaa 43423063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #126
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 43423225 - 43423177
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    ||||||||||||||||||||| |||||  |||||| | |||||||||||    
T  43423225 tttggtccttttagtttgacataattcctaagttagttatttaagtttc 43423177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 1e-53; HSPs: 68)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 11527539 - 11527685
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||| ||||||| |||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||| ||||||| || ||||    
T  11527539 ggtccttttactttgacataattcctaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacaaaattcacaagttagtccttta 11527638  T
Q  189 agtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||    
T  11527639 agtttcaaataggtcattttagttgataaactatttcaccgttaccc 11527685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 89 - 232
Target Start/End: Complemental strand, 2840173 - 2840030
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||| ||| ||||   ||||||||| ||||||||||||||||||| | | | |||||||||||| |||||||||||||||||||||||||    
T  2840173 ggtccttttagtttaacataattctcaagttagtcatttaagtttcaaaagtttcgaatagatccttttagtttaacagaattctcaagttaatcattta 2840074  T
Q  189 agtttcaaatagatcattttagttgataaactatttcaccgtta 232  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  2840073 agtttcaaataggtcattttagttgataaactatttcaccgtta 2840030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 2839628 - 2839774
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||| ||||| | ||||   ||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| || ||||    
T  2839628 ggtccttttaatttgaaagaattctcaagttagtcgtttaagtttcaaaagtttcaattaggtccttttaatttgacagaattctcaagttagtccttta 2839727  T
Q  189 agtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    | |||||||||| |  ||||||||||||||||||||||  |||||||    
T  2839728 aatttcaaataggtttttttagttgataaactatttcattgttaccc 2839774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 89 - 228
Target Start/End: Original strand, 16168468 - 16168607
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||||| | ||||   | |||||||||||||||||  |||||||||||| |||| ||||||||||||||||||  ||||||| || ||||    
T  16168468 ggtccttttagtttgatagaattctcacgttagtcctttaagttttgaaagtttcaattaggtcattttagtttgacagaatttccaagttagtccttta 16168567  T
Q  189 agtttcaaatagatcattttagttgataaactatttcacc 228  Q
    |||||||||||| || ||||||||||||||||||||||||    
T  16168568 agtttcaaataggtccttttagttgataaactatttcacc 16168607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 97 - 235
Target Start/End: Complemental strand, 9946818 - 9946680
Alignment:
Q  97 tagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaa 196  Q
    |||||||||| |||||||||||||||||||||| | || |||||||||||| |||| ||||||||||||| ||||  ||| ||| || ||||| ||||||    
T  9946818 tagtttgacataatttctaagttagtcctttaaatctcgaaagtttcaattaggtcattttagtttgacataatttccaaattagtcctttaaatttcaa 9946719  T
Q  197 atagatcattttagttgataaactatttcaccgttaccc 235  Q
    | || || |||||||||||||||||||||||||||||||    
T  9946718 agaggtccttttagttgataaactatttcaccgttaccc 9946680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 17180260 - 17180105
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattt- 187  Q
    |||||||||||||| | | ||||| ||| ||| ||||||||||||| ||||||| ||||  ||||||||||||||||| |||| |||||||| || |||     
T  17180260 ggtccttttagttttatataatttttaaattaatcctttaagtttcgaaagttttaattatgtccttttagtttgacataattttcaagttagtccttta 17180161  T
Q  188 --------aagtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
            ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17180160 agttttaaaagtttcaaatagatcattttagttgataaactatttcaccgttaccc 17180105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 32417472 - 32417580
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||||||| |||||  |||||||||||||||||||| ||||||| ||||  ||| ||||||||||||| |||| |||||||| |||||||    
T  32417472 ggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaaagttttaattatgtcattttagtttgacaaaattttcaagttagtcattta 32417571  T
Q  189 agtttcaaa 197  Q
    |||||||||    
T  32417572 agtttcaaa 32417580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 32423313 - 32423421
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||||||| |||||  |||||||||||||||||||| ||||||| ||||  ||| ||||||||||||| |||| |||||||| |||||||    
T  32423313 ggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaaagttttaattatgtcattttagtttgacaaaattttcaagttagtcattta 32423412  T
Q  189 agtttcaaa 197  Q
    |||||||||    
T  32423413 agtttcaaa 32423421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 243 - 333
Target Start/End: Original strand, 10962930 - 10963020
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||||  ||  ||||||||||||||||||||||||||||||| |||||    
T  10962930 tagccgttaagttgttgacttggatcaaaatgctgttttttaaaagctttaggatgtcaaaacgctacgtttaatggtcacaaatgatcat 10963020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 28630738 - 28630592
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||||||| |||| ||||||||||  |||||||||  |||||||||||| |  || |||||||||  |||||||  |||||| |  ||||    
T  28630738 ggtccttttagtttgacataattcctaagttagttttttaagttttgaaagtttcaattagacccatttagtttggtagaattcctaagttagtacttta 28630639  T
Q  189 agtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    || ||||||||| || |||||||||||||||||||||||| ||||||    
T  28630638 agcttcaaataggtccttttagttgataaactatttcacctttaccc 28630592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 10862709 - 10862553
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattt- 187  Q
    |||||||||||||||||| ||||   |||||||||||||||||||  ||||||||||||  ||| ||||||||||| ||||||| | ||||| ||||||     
T  10862709 ggtccttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttcaattaagtcattttagtttgaaagaattccccagttagtcatttt 10862610  T
Q  188 ---------aagtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
             ||||||||||||| || |||||||||||||||||||||||||||||||    
T  10862609 aaatttcaaaagtttcaaataggtccttttagttgataaactatttcaccgttaccc 10862553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 94 - 197
Target Start/End: Complemental strand, 16168807 - 16168704
Alignment:
Q  94 ttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagttt 193  Q
    ||||||||||||| |||||| || |||||| ||||||||||  ||||||||||| |||||||||||||||||||||||||||||||| ||  ||| ||||    
T  16168807 ttttagtttgacagaatttccaaattagtcatttaagtttcgcaagtttcaattaggtccttttagtttgacagaattctcaagttagtctattacgttt 16168708  T
Q  194 caaa 197  Q
    ||||    
T  16168707 caaa 16168704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 82 - 161
Target Start/End: Complemental strand, 32417781 - 32417702
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||| | |||||||||||||    
T  32417781 tcaattaggtcctttcagtttgacaaaatttctaagttagtcatttaagtttcagaagtttcaaataggtccttttagtt 32417702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 82 - 161
Target Start/End: Complemental strand, 32423622 - 32423543
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||| | |||||||||||||    
T  32423622 tcaattaggtcctttcagtttgacaaaatttctaagttagtcatttaagtttcagaagtttcaaataggtccttttagtt 32423543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 197
Target Start/End: Original strand, 32417527 - 32417640
Alignment:
Q  84 aattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatc 183  Q
    ||||| ||| |||||||||||||||||||  ||||||||| |||||||||||||||||| || |  ||||||||||||||||||||||  ||| ||| ||    
T  32417527 aattatgtcattttagtttgacaaaattttcaagttagtcatttaagtttcaaaagttttaaatatgtccttttagtttgacagaatttccaaattagtc 32417626  T
Q  184 atttaagtttcaaa 197  Q
     |||||||||||||    
T  32417627 ctttaagtttcaaa 32417640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 84 - 197
Target Start/End: Original strand, 32423368 - 32423481
Alignment:
Q  84 aattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatc 183  Q
    ||||| ||| |||||||||||||||||||  ||||||||| |||||||||||||||||| || |  ||||||||||||||||||||||  ||| ||| ||    
T  32423368 aattatgtcattttagtttgacaaaattttcaagttagtcatttaagtttcaaaagttttaaatatgtccttttagtttgacagaatttccaaattagtc 32423467  T
Q  184 atttaagtttcaaa 197  Q
     |||||||||||||    
T  32423468 ctttaagtttcaaa 32423481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 93 - 205
Target Start/End: Complemental strand, 9902382 - 9902270
Alignment:
Q  93 cttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtt 192  Q
    |||||||||||||| |||||  ||||||||| |||||||||| ||||||| ||||  ||||||||||||||||| ||||| | ||||| |  ||||||||    
T  9902382 cttttagtttgacagaattttcaagttagtcttttaagtttcgaaagttttaattatgtccttttagtttgacataattcccgagttagttctttaagtt 9902283  T
Q  193 tcaaatagatcat 205  Q
    |||||||||||||    
T  9902282 tcaaatagatcat 9902270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 41 - 197
Target Start/End: Complemental strand, 16168800 - 16168644
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    ||||||||||| | || |||||| ||| |||| |   ||| ||||||||||||||||||||||||| ||||   |||||||||  ||| |||||||||||    
T  16168800 ttgacagaatttccaaattagtcatttaagtttcgcaagtttcaattaggtccttttagtttgacagaattctcaagttagtctattacgtttcaaaagt 16168701  T
Q  141 ttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    ||||| | |||| |||||||||||| ||| || ||||||| || |||||||||||||    
T  16168700 ttcaaataggtctttttagtttgactgaaatcccaagttagtcttttaagtttcaaa 16168644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 89 - 224
Target Start/End: Original strand, 20575415 - 20575559
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||||| | |||||| |||||||||||||||||||| ||||||| || | |||||||||||||||| ||||||  ||||||| || ||||    
T  20575415 ggtccttttagtttgatagaatttccaagttagtcctttaagtttcgaaagttttaaataggtccttttagtttgatagaatttccaagttagtccttta 20575514  T
Q  189 agt---------ttcaaatagatcattttagttgataaactattt 224  Q
    |||         ||||||||| |||||| ||||||||||||||||    
T  20575515 agttttaaaagtttcaaataggtcatttcagttgataaactattt 20575559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 137
Target Start/End: Original strand, 11527551 - 11527647
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaa 137  Q
    |||||| ||||||||| |||||| ||| |||| | | ||| ||||||||||||||||||||||||||||||   |||||||||||||||||||||||    
T  11527551 ttgacataattcctaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacaaaattcacaagttagtcctttaagtttcaaa 11527647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 247 - 338
Target Start/End: Complemental strand, 28630554 - 28630463
Alignment:
Q  247 cgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    |||||||||||||||||| |||||||||||| |||||||||| | ||| |||||||||||| | ||||||| ||||||||| ||||| ||||    
T  28630554 cgttaagttgttgacttggatcaaaatgctgccttttaaaagttacagggtgtcaaaacgccatgtttaatagtcacaaatgatcatttata 28630463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 246 - 327
Target Start/End: Complemental strand, 11527974 - 11527893
Alignment:
Q  246 ccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaat 327  Q
    ||||| ||||||||||||| |||||||  |||||||||||||| ||||| ||||||||||| || |||||||||||||||||    
T  11527974 ccgttcagttgttgacttggatcaaaacactgtcttttaaaagttccagggtgtcaaaacgttatgtttaatggtcacaaat 11527893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 94 - 230
Target Start/End: Complemental strand, 32417829 - 32417684
Alignment:
Q  94 ttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagt-- 191  Q
    ||||||||| ||| |||| | |||||||| |||||| |||| |||||||||||| |||||||| ||||||||| ||||   |||||| ||||||||||      
T  32417829 ttttagttttacagaattcccaagttagttctttaactttcgaaagtttcaattaggtcctttcagtttgacaaaatttctaagttagtcatttaagttt 32417730  T
Q  192 -------ttcaaatagatcattttagttgataaactatttcaccgt 230  Q
           ||||||||| || ||||||||||||||||||||||||||    
T  32417729 cagaagtttcaaataggtccttttagttgataaactatttcaccgt 32417684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 94 - 230
Target Start/End: Complemental strand, 32423670 - 32423525
Alignment:
Q  94 ttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagt-- 191  Q
    ||||||||| ||| |||| | |||||||| |||||| |||| |||||||||||| |||||||| ||||||||| ||||   |||||| ||||||||||      
T  32423670 ttttagttttacagaattcccaagttagttctttaactttcgaaagtttcaattaggtcctttcagtttgacaaaatttctaagttagtcatttaagttt 32423571  T
Q  192 -------ttcaaatagatcattttagttgataaactatttcaccgt 230  Q
           ||||||||| || ||||||||||||||||||||||||||    
T  32423570 cagaagtttcaaataggtccttttagttgataaactatttcaccgt 32423525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 243 - 326
Target Start/End: Original strand, 9902091 - 9902174
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaa 326  Q
    ||||| |||||||||||||||| ||||||| |||| |||||||||||| || ||||| |||||| |||||||||| ||||||||    
T  9902091 tagccattaagttgttgacttggatcaaaacgctgccttttaaaagcttcaaagtgttaaaacgttacgtttaatcgtcacaaa 9902174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 247 - 338
Target Start/End: Complemental strand, 17180069 - 17179978
Alignment:
Q  247 cgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    |||||||||||||||||| |||||||||||| ||||||||| ||| |  |||||||||| |||| |||||||||| ||||| ||||| ||||    
T  17180069 cgttaagttgttgacttgaatcaaaatgctgccttttaaaaactcgatggtgtcaaaacactacatttaatggtcccaaatgatcatttata 17179978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 145
Target Start/End: Complemental strand, 20575665 - 20575602
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    |||| |||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||    
T  20575665 tcaaataggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaa 20575602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 233
Target Start/End: Complemental strand, 11528166 - 11528013
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattt- 187  Q
    |||||||| ||||||||  |||||  ||||||||||||||||||| ||||||||||| |   | |||||||||||||| || || ||| |||||| |||     
T  11528166 ggtcctttaagtttgaccgaattttcaagttagtcctttaagtttaaaaagtttcaaatatattcttttagtttgacataagtcccaacttaatccttta 11528067  T
Q  188 --------aagtttcaaatagatcattttagttgataaactatttcaccgttac 233  Q
            ||||||||||||  |||||||||||||||||||||||||| |||||    
T  11528066 agtttcaaaagtttcaaatatgtcattttagttgataaactatttcactgttac 11528013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 16168521 - 16168576
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaa 137  Q
    ||||||||||| ||||||||||||| |||||| |||||||||||||||||||||||    
T  16168521 tcaattaggtcattttagtttgacagaatttccaagttagtcctttaagtttcaaa 16168576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 118 - 197
Target Start/End: Complemental strand, 24139600 - 24139521
Alignment:
Q  118 ttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    ||||||||||||||||| ||||||| ||||  ||||||||||||||| |||||| ||| |||| || |||||||||||||    
T  24139600 ttagtcctttaagtttcgaaagttttaattaagtccttttagtttgatagaattatcaggttagtcctttaagtttcaaa 24139521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 247 - 333
Target Start/End: Original strand, 17179820 - 17179905
Alignment:
Q  247 cgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    |||||||||||||||||  |||||| || |  |||||||||||||||| ||||||||||| |||| ||||||||||||||| |||||    
T  17179820 cgttaagttgttgacttagatcaaa-tgttaccttttaaaagctccagggtgtcaaaacgttacgcttaatggtcacaaatgatcat 17179905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 87 - 145
Target Start/End: Original strand, 20575473 - 20575531
Alignment:
Q  87 taggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    |||||||||||||||||| | |||||| ||||||||||||||||||| |||||||||||    
T  20575473 taggtccttttagtttgatagaatttccaagttagtcctttaagttttaaaagtttcaa 20575531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 84 - 161
Target Start/End: Original strand, 17179682 - 17179759
Alignment:
Q  84 aattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    |||||||||| |||||||||| | |||||  ||||||||||||||| |||||||| |||||| | |||||||||||||    
T  17179682 aattaggtccctttagtttgatagaattttcaagttagtcctttaaatttcaaaaatttcaaataggtccttttagtt 17179759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 17180205 - 17180144
Alignment:
Q  84 aattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    ||||| ||||||||||||||||| |||||  ||||||||||||||||||| |||||||||||    
T  17180205 aattatgtccttttagtttgacataattttcaagttagtcctttaagttttaaaagtttcaa 17180144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 327
Target Start/End: Complemental strand, 2839993 - 2839909
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaat 327  Q
    |||||||||||| ||||| ||| ||||||| ||||| ||||||||||| ||| |||| | |||| ||||||||||||| ||||||    
T  2839993 tagccgttaagtggttgatttggatcaaaacgctgttttttaaaagcttcagggtgttagaacgttacgtttaatggtaacaaat 2839909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 247 - 327
Target Start/End: Original strand, 11527723 - 11527803
Alignment:
Q  247 cgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaat 327  Q
    |||||||||||||| ||| ||||||||| |  ||||||||||||  ||  |||||||||||||| ||||||||||||||||    
T  11527723 cgttaagttgttgagttggatcaaaatgttaccttttaaaagcttaaggctgtcaaaacgctacttttaatggtcacaaat 11527803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 20575670 - 20575610
Alignment:
Q  137 aagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    ||||||||| | |||||||||||||||||||||||| ||||||| || |||||||||||||    
T  20575670 aagtttcaaataggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaa 20575610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 175 - 235
Target Start/End: Original strand, 24139087 - 24139147
Alignment:
Q  175 aagttaatcatttaagtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    ||||||||||||||||||||||| |  ||||||||||||||||| ||||||||| ||||||    
T  24139087 aagttaatcatttaagtttcaaaaatgtcattttagttgataaattatttcaccattaccc 24139147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 338
Target Start/End: Original strand, 2839808 - 2839894
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    |||||||||||||||||||||| || ||||||||         ||||||||| ||||||||||||||| |||||||||||||||| ||||| ||||    
T  2839808 tagccgttaagttgttgacttggataaaaatgct---------aagctccagggtgtcaaaacgctacatttaatggtcacaaatgatcatttata 2839894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 2840176 - 2840125
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    ||||||||||||||||| ||| ||||||||||||| ||||||||||||||||    
T  2840176 tttggtccttttagtttaacataattctcaagttagtcatttaagtttcaaa 2840125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 10407313 - 10407368
Alignment:
Q  90 gtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    |||||||||||||||||||||| ||| |||| | ||||||||||||||||||||||    
T  10407313 gtccttttagtttgacaaaattcctatgttactgctttaagtttcaaaagtttcaa 10407368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 193
Target Start/End: Complemental strand, 10862712 - 10862665
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagttt 193  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||    
T  10862712 tttggtccttttagtttgacagaattctcaagttagtcctttaagttt 10862665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 212
Target Start/End: Complemental strand, 20575763 - 20575646
Alignment:
Q  93 cttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtt 192  Q
    |||||||||||||| ||||   ||||||||  |||||||||| ||||||| || |  ||||||||||||||||| ||||| ||||||| || || |||||    
T  20575763 cttttagtttgacagaattctcaagttagtt-tttaagtttcgaaagttttaaataagtccttttagtttgacaaaattcccaagttagtc-ttcaagtt 20575666  T
Q  193 tcaaatagatcattttagtt 212  Q
    |||||||| || ||||||||    
T  20575665 tcaaataggtccttttagtt 20575646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 338
Target Start/End: Complemental strand, 10407668 - 10407579
Alignment:
Q  249 ttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    |||||||||||| ||| | ||||||| ||  |||||||  |||||| |||||||||||   |||||||||||||||||| ||||||||||    
T  10407668 ttaagttgttgaattggaacaaaatgttgcgttttaaagtctccagggtgtcaaaacgacgcgtttaatggtcacaaatgatcatctata 10407579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 243 - 324
Target Start/End: Complemental strand, 24139440 - 24139360
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcaca 324  Q
    ||||| |||||||||||||||| |||||||  ||   ||||||||||| ||| |||| ||||||||||||||||||||||||    
T  24139440 tagccattaagttgttgacttggatcaaaacactacattttaaaagcttcag-gtgttaaaacgctacgtttaatggtcaca 24139360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 41 - 137
Target Start/End: Original strand, 2839640 - 2839736
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaa 137  Q
    |||| |||||||  || |||||| ||| |||| ||| ||| ||||||||||||||||| ||||||| ||||   ||||||||||||||| |||||||    
T  2839640 ttgaaagaattctcaagttagtcgtttaagtttcaaaagtttcaattaggtccttttaatttgacagaattctcaagttagtcctttaaatttcaaa 2839736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 9901962 - 9902034
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    ||||||||||||||| || |||||| |||||||| |||| |||||||||||||| || | |||| ||||||||    
T  9901962 ggtccttttagtttgccagaatttccaagttagtgcttttagtttcaaaagttttaaataggtcattttagtt 9902034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 32417469 - 32417517
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    |||||||||||||||||||||||||| |||||||| || ||||||||||    
T  32417469 tttggtccttttagtttgacagaattttcaagttagtcctttaagtttc 32417517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 32417593 - 32417641
Alignment:
Q  90 gtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaa 138  Q
    ||||||||||||||||| |||||| || |||||||||||||||||||||    
T  32417593 gtccttttagtttgacagaatttccaaattagtcctttaagtttcaaaa 32417641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 32423310 - 32423358
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    |||||||||||||||||||||||||| |||||||| || ||||||||||    
T  32423310 tttggtccttttagtttgacagaattttcaagttagtcctttaagtttc 32423358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 32423434 - 32423482
Alignment:
Q  90 gtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaa 138  Q
    ||||||||||||||||| |||||| || |||||||||||||||||||||    
T  32423434 gtccttttagtttgacagaatttccaaattagtcctttaagtttcaaaa 32423482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 197
Target Start/End: Original strand, 2839625 - 2839676
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    ||||||||||||| ||||| ||||||||||||||| || |||||||||||||    
T  2839625 tttggtccttttaatttgaaagaattctcaagttagtcgtttaagtttcaaa 2839676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 9902010 - 9902057
Alignment:
Q  188 aagtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    |||||| |||||| ||||||||||||||||||||||||| ||||||||    
T  9902010 aagttttaaataggtcattttagttgataaactatttcatcgttaccc 9902057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 308
Target Start/End: Complemental strand, 9946649 - 9946582
Alignment:
Q  241 tatagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgct 308  Q
    |||||||||||||||||| ||||| |||| |||| ||  ||||||||||| ||| |||||||||||||    
T  9946649 tatagccgttaagttgttaacttggatcagaatgttgcattttaaaagcttcagggtgtcaaaacgct 9946582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 9946773 - 9946718
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaa 137  Q
    ||||||||||| ||||||||||||| |||||| || |||||||||||| |||||||    
T  9946773 tcaattaggtcattttagtttgacataatttccaaattagtcctttaaatttcaaa 9946718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 145
Target Start/End: Original strand, 10962794 - 10962857
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    |||||||| |||||||| ||| | | ||||||||| |||||||||||||||| |||||||||||    
T  10962794 tcaattagatccttttattttaatagaatttctaaattagtcctttaagttttaaaagtttcaa 10962857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 10962849 - 10962896
Alignment:
Q  188 aagtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    ||||||||||||  ||||||||||||||||||||||| ||||||||||    
T  10962849 aagtttcaaatatgtcattttagttgataaactattttaccgttaccc 10962896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 234
Target Start/End: Complemental strand, 10407755 - 10407709
Alignment:
Q  188 aagtttcaaatagatcattttagttgataaactatttcaccgttacc 234  Q
    ||||||||||||  |||||||||||||||||||||||||| ||||||    
T  10407755 aagtttcaaatatgtcattttagttgataaactatttcactgttacc 10407709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 160 - 197
Target Start/End: Complemental strand, 17132265 - 17132228
Alignment:
Q  160 tttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    |||||||||||||||||||||||| |||||||||||||    
T  17132265 tttgacagaattctcaagttaatcctttaagtttcaaa 17132228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 137
Target Start/End: Complemental strand, 9902374 - 9902278
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaa 137  Q
    |||||||||||   || |||||||||| |||| | | ||| | ||||| ||||||||||||||||| |||| |  ||||||| ||||||||||||||    
T  9902374 ttgacagaattttcaagttagtcttttaagtttcgaaagttttaattatgtccttttagtttgacataattcccgagttagttctttaagtttcaaa 9902278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 9902389 - 9902341
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    |||||| ||||||||||||||||||| |||||||| || ||||||||||    
T  9902389 tttggttcttttagtttgacagaattttcaagttagtcttttaagtttc 9902341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 249 - 327
Target Start/End: Original strand, 28630318 - 28630393
Alignment:
Q  249 ttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaat 327  Q
    |||||||||||||||| || |||||| |   ||||||||||| | | ||||||||| | ||||||||||||||||||||    
T  28630318 ttaagttgttgacttggattaaaatgtt---ttttaaaagcttcggggtgtcaaaatgttacgtttaatggtcacaaat 28630393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 10407360 - 10407407
Alignment:
Q  188 aagtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    ||||||||||||  ||||||||||||||||| |||||||| |||||||    
T  10407360 aagtttcaaatatgtcattttagttgataaattatttcactgttaccc 10407407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 193
Target Start/End: Original strand, 16168465 - 16168512
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagttt 193  Q
    ||||||||||||||||||| |||||||||| |||| || |||||||||    
T  16168465 tttggtccttttagtttgatagaattctcacgttagtcctttaagttt 16168512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 333
Target Start/End: Original strand, 24139191 - 24139273
Alignment:
Q  251 aagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    |||||||||||||  ||||||| | ||| ||||||||| || ||  | | |||||| || |||||||||||||||||||||||    
T  24139191 aagttgttgacttagatcaaaacgttgtattttaaaagttctaggatattaaaacgttatgtttaatggtcacaaattatcat 24139273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 10862697 - 10862576
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtccttt-aagtttcaaaag 139  Q
    ||||||||||||  || |||||| ||| ||||   | ||| ||||||| ||| ||||||||||| | |||| |  |||||||| ||| || |||||||||    
T  10862697 ttgacagaattctcaagttagtcctttaagttttgaaagtttcaattaagtcattttagtttgaaagaattccccagttagtcattttaaatttcaaaag 10862598  T
Q  140 tttcaatttggtccttttagtt 161  Q
    |||||| | |||||||||||||    
T  10862597 tttcaaataggtccttttagtt 10862576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 171
Target Start/End: Original strand, 10962746 - 10962823
Alignment:
Q  94 ttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaatt 171  Q
    |||||||||||||||||| | |||||| ||  | ||||||| |||||||||||| | |||||||| ||| | ||||||    
T  10962746 ttttagtttgacaaaattccaaagttattctgtaaagtttcgaaagtttcaattagatccttttattttaatagaatt 10962823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 24139574 - 24139513
Alignment:
Q  84 aattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    ||||| ||||||||||||||| | ||||   | |||||||||||||||||||||| ||||||    
T  24139574 aattaagtccttttagtttgatagaattatcaggttagtcctttaagtttcaaaaatttcaa 24139513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 98; Significance: 3e-48; HSPs: 83)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 19631766 - 19631916
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaa----tca 184  Q
    |||||||||| ||||||||||||   |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||    ||     
T  19631766 ggtccttttattttgacaaaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaattctcaagttaattagtcc 19631865  T
Q  185 tttaagtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  19631866 tttaagtttcaaataggtcattttagttgataaactattttaccgttaccc 19631916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 41 - 197
Target Start/End: Complemental strand, 43098521 - 43098365
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    ||||||||||| ||||||||||  ||| |||| | | ||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  43098521 ttgacagaatttctaacttagttctttaagtttcgaaagtttcaattaggtccttttagtttgacaaaattcccaagttagtcctttaagtttcaaaagt 43098422  T
Q  141 ttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    ||||| |  ||| ||||||||| ||||||||| ||||||| || |||||||||||||    
T  43098421 ttcaaatatgtcattttagtttaacagaattcccaagttagtcctttaagtttcaaa 43098365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 82 - 197
Target Start/End: Complemental strand, 2789043 - 2788928
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaa 181  Q
    ||||||||||| ||||||||||||| |||||  ||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||     
T  2789043 tcaattaggtcattttagtttgacagaattttcaagttagtcctttaagtttcaaaagtttcaaataggtcattttagtttgacagaattctcaagttag 2788944  T
Q  182 tcatttaagtttcaaa 197  Q
    ||||||||||||||||    
T  2788943 tcatttaagtttcaaa 2788928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 41 - 227
Target Start/End: Complemental strand, 26330116 - 26329921
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    ||||||||||||  || |||||| ||| ||||   | ||| |||||||| |||||||||||| ||| |||| | ||||||||||||||||||||||||||    
T  26330116 ttgacagaattctcaagttagtcctttaagttttgaaagtttcaattagatccttttagttttacagaattcccaagttagtcctttaagtttcaaaagt 26330017  T
Q  141 ttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagttt---------caaatagatcattttagttgataaactatttcac 227  Q
    ||||| | |||||||||||||||||| ||||| ||||||| ||||||||||||         ||||||| ||||||||||||||||||||||||||    
T  26330016 ttcaaataggtccttttagtttgacataattcccaagttagtcatttaagtttcaaaagtttcaaataggtcattttagttgataaactatttcac 26329921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 52183545 - 52183399
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||| ||||||||   |||||||||||||||||||| |||||||||||| || ||||||||||||||||||||| ||||  | || ||||    
T  52183545 ggtccttttagttttacaaaattctcaagttagtcctttaagtttcgaaagtttcaattaggcccttttagtttgacagaattcccaagccagtccttta 52183446  T
Q  189 agtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    |||||||||||  |  ||| |||||||||||||||||||||||||||    
T  52183445 agtttcaaataagttttttaagttgataaactatttcaccgttaccc 52183399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 90 - 235
Target Start/End: Original strand, 52865960 - 52866105
Alignment:
Q  90 gtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaa 189  Q
    ||||||||||||||||| ||||   |||||||||||||||||||  ||||||| ||||  || |||||||||||||| ||| |||||  || || |||||    
T  52865960 gtccttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttaaattatgttcttttagtttgacaaaatgctcaatctagtcctttaa 52866059  T
Q  190 gtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||    
T  52866060 gtttcaaataggtcattttagttgataaactatttcagcgttaccc 52866105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 43098533 - 43098425
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||||||| ||||||||| ||||| ||||||||||| |||||||||||| |||||||||||||||||| ||||| ||||||| || ||||    
T  43098533 ggtccttttagtttgacagaatttctaacttagttctttaagtttcgaaagtttcaattaggtccttttagtttgacaaaattcccaagttagtccttta 43098434  T
Q  189 agtttcaaa 197  Q
    |||||||||    
T  43098433 agtttcaaa 43098425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 89 - 227
Target Start/End: Original strand, 43098185 - 43098328
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatca--tt 186  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||  |||| |||  |||||| |||  ||    
T  43098185 ggtccttttagtttgacaaaatttctaagttagtcctttaagttttgaaagtttcaattaggtccttttagtttaccagagttccgaagttagtcaagtt 43098284  T
Q  187 t---aagtttcaaatagatcattttagttgataaactatttcac 227  Q
    |   ||||||||||||  || |||||||||||||||||||||||    
T  43098285 tcaaaagtttcaaataagtccttttagttgataaactatttcac 43098328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 91 - 235
Target Start/End: Original strand, 5387131 - 5387284
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattt--- 187  Q
    |||||||||||||||  |||||||||||||||||||||||||| |||||||||||||   || ||||||||||||||||||| |||||||  | |||       
T  5387131 tccttttagtttgactgaatttctaagttagtcctttaagttttaaaagtttcaattatatcattttagtttgacagaattcccaagttagccctttaag 5387230  T
Q  188 ------aagtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
          |||||||||||||||| ||||||||||||||| |||||||||||||||    
T  5387231 tttcaaaagtttcaaatagatctttttagttgataaacaatttcaccgttaccc 5387284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 2789092 - 2788988
Alignment:
Q  93 cttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtt 192  Q
    |||||||||||||||||||| ||| ||||||||||||||||   ||||||||||| |||| |||||||||||||||||| |||||||| || ||||||||    
T  2789092 cttttagtttgacaaaatttttaaattagtcctttaagttttggaagtttcaattaggtcattttagtttgacagaattttcaagttagtcctttaagtt 2788993  T
Q  193 tcaaa 197  Q
    |||||    
T  2788992 tcaaa 2788988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 247 - 338
Target Start/End: Original strand, 52181911 - 52182002
Alignment:
Q  247 cgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    |||||||||||||||||  ||||||||| || |||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||    
T  52181911 cgttaagttgttgactttgatcaaaatgttgccttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaatgatcatttata 52182002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 91 - 180
Target Start/End: Original strand, 2788795 - 2788884
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagtta 180  Q
    ||||||||||||||  |||||   |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  2788795 tccttttagtttgatgaaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaattctcaagtta 2788884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 41735815 - 41735923
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||| ||| |||| | ||||||||||||||||||||||||||||||| | |||||||||||||||||||||||  ||||| | || ||||    
T  41735815 ggtccttttagtttaacataattcccaagttagtcctttaagtttcaaaagtttcaaataggtccttttagtttgacagaatttccaagtcagtccttta 41735914  T
Q  189 agtttcaaa 197  Q
    | |||||||    
T  41735915 aatttcaaa 41735923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 243 - 338
Target Start/End: Original strand, 19681380 - 19681475
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    |||||||||||||||||||||| |||| |||| |||||||||||||||| ||  |||||||||| |||||||||||||||||||| ||||| ||||    
T  19681380 tagccgttaagttgttgacttggatcataatgttgtcttttaaaagctcgaggatgtcaaaacgttacgtttaatggtcacaaatgatcatttata 19681475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 90 - 197
Target Start/End: Complemental strand, 26330127 - 26330020
Alignment:
Q  90 gtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaa 189  Q
    ||||||||||||||||| ||||   |||||||||||||||||||  |||||||||||| | |||||||||||| ||||||||| ||||||| || |||||    
T  26330127 gtccttttagtttgacagaattctcaagttagtcctttaagttttgaaagtttcaattagatccttttagttttacagaattcccaagttagtcctttaa 26330028  T
Q  190 gtttcaaa 197  Q
    ||||||||    
T  26330027 gtttcaaa 26330020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 44916371 - 44916286
Alignment:
Q  150 gtccttttagtttgacagaattctcaagttaatcatttaagtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    ||||||||||||||||| |||| |||||||| || |||||||||||||||| | |||||||||||||||||||||||| |||||||    
T  44916371 gtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaataggttattttagttgataaactatttcactgttaccc 44916286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 9320017 - 9320121
Alignment:
Q  93 cttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtt 192  Q
    |||||||||||||||||||   ||||||||  |||||||||| ||||||||||||  || |||||||||||||||||||||||| ||| |||||||| ||    
T  9320017 cttttagtttgacaaaattctcaagttagttttttaagtttcgaaagtttcaattaagttcttttagtttgacagaattctcaatttagtcatttaaatt 9320116  T
Q  193 tcaaa 197  Q
    |||||    
T  9320117 tcaaa 9320121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 8408981 - 8408826
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||| ||||||||||||| ||||   ||||||||| |||||||||| ||| |||||||   || ||||||||||||||||||| |||||||| |||||||    
T  8408981 ggtcattttagtttgacataattctcaagttagtcatttaagtttcgaaaatttcaatgatgttcttttagtttgacagaattttcaagttagtcattta 8408882  T
Q  189 agttt---------caaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    |||||         ||||||| |||| ||||||||||||||||||||||| |||||    
T  8408881 agtttcaaaagtttcaaataggtcatcttagttgataaactatttcaccgctaccc 8408826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 89 - 234
Target Start/End: Original strand, 31229257 - 31229412
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtccttt-aagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattt 187  Q
    |||| ||||| ||||||| |||||  || |||||||||| ||||||| ||||||||| || |||| ||||||||||| ||||||||||||||| ||||||    
T  31229257 ggtctttttaatttgacagaattttcaaattagtccttttaagtttcgaaagtttcacttaggtctttttagtttgatagaattctcaagttagtcattt 31229356  T
Q  188 ---------aagtttcaaatagatcattttagttgataaactatttcaccgttacc 234  Q
             ||||||||||||| |  ||||||||||||||||||||||||||||||    
T  31229357 aagtttcaaaagtttcaaataggttcttttagttgataaactatttcaccgttacc 31229412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 247 - 338
Target Start/End: Complemental strand, 31229696 - 31229605
Alignment:
Q  247 cgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    |||||||||||||||||| |||||||||||  |||| |||||||| || |||||||||||||| ||||||||||||||||| ||||| ||||    
T  31229696 cgttaagttgttgacttgaatcaaaatgcttcctttcaaaagctcgagggtgtcaaaacgctatgtttaatggtcacaaatgatcatttata 31229605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 242 - 324
Target Start/End: Complemental strand, 8408793 - 8408711
Alignment:
Q  242 atagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcaca 324  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||| || | ||||||||||||| |||||||| |||||    
T  8408793 atagccgttaagttgttgacttggatcaaaatgttgtcttttaaaagcttcaaaatgtcaaaacgctatgtttaatgatcaca 8408711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 192
Target Start/End: Complemental strand, 22025417 - 22025319
Alignment:
Q  94 ttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtt 192  Q
    ||||||||||||| ||||   |||||||||||| ||||||| |||||||||||| ||| |||||||||||||||||||| ||||||| || ||||||||    
T  22025417 ttttagtttgacataattatcaagttagtccttgaagtttcgaaagtttcaattaggttcttttagtttgacagaattcccaagttagtcctttaagtt 22025319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 30543240 - 30543103
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||| |||||||||||||| || ||| |||||||||||| |||  ||         | |||||||||||||| |||| |||||||| || ||||    
T  30543240 ggtccttttaatttgacaaaatttccaaattaatcctttaagttttaaatatt---------ttcttttagtttgacaaaattatcaagttagtccttta 30543150  T
Q  189 agtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    | ||||||||| ||||||||| |||||||||||||||||||||||||    
T  30543149 aatttcaaataaatcattttaattgataaactatttcaccgttaccc 30543103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 52181720 - 52181826
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaag 190  Q
    |||||||||||||||||||||   |||||||| |||||| |||  |||||||||||   ||||||||||||||||||||||| ||||||| || ||||||    
T  52181720 tccttttagtttgacaaaattctcaagttagttctttaaattttgaaagtttcaatcatgtccttttagtttgacagaattcccaagttagtcctttaag 52181819  T
Q  191 tttcaaa 197  Q
    |||||||    
T  52181820 tttcaaa 52181826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 235
Target Start/End: Complemental strand, 52568311 - 52568162
Alignment:
Q  94 ttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagttt 193  Q
    ||||||||||||| || | | || ||||| |||||| ||||||||||||||||| |||| ||||||||||| ||||||||||||| | || |||||||||    
T  52568311 ttttagtttgacataactcccaatttagtactttaaatttcaaaagtttcaattaggtcattttagtttgatagaattctcaagtcagtcctttaagttt 52568212  T
Q  194 ---------caaatagatcattttagttgataaactatttcaccgttaccc 235  Q
             ||||||||||  ||||||||||||||||||||||||||||||    
T  52568211 caaaagtttcaaatagatc-ctttagttgataaactatttcaccgttaccc 52568162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 82 - 178
Target Start/End: Complemental strand, 22025369 - 22025274
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagt 178  Q
    |||||||||| |||||||||||||| |||| | |||||||||||||||| |||||| ||||||| | |||  |||||||||||||||||||||||||    
T  22025369 tcaattaggttcttttagtttgacagaattcccaagttagtcctttaag-ttcaaaggtttcaaataggtaattttagtttgacagaattctcaagt 22025274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 243 - 338
Target Start/End: Complemental strand, 19632179 - 19632084
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    |||||||||||||||||||| | ||||||||| |   |||||||||||| ||||||||||||| |||||||||| |||||||||| ||||| ||||    
T  19632179 tagccgttaagttgttgactaggatcaaaatgttacattttaaaagctcaagagtgtcaaaactctacgtttaacggtcacaaatgatcatttata 19632084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 82 - 145
Target Start/End: Original strand, 26329819 - 26329882
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    ||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||    
T  26329819 tcaattaggtccttttagtttgacagaatttccaagttagccctttaagtttcaaaagtttcaa 26329882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 95 - 197
Target Start/End: Original strand, 35046437 - 35046539
Alignment:
Q  95 tttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    |||||||||||| |||||  || ||||||||||||||||| ||||||| |||| | ||||||||||||||||||||||  || ||| || ||||||||||    
T  35046437 tttagtttgacataattttcaatttagtcctttaagtttcgaaagttttaattagatccttttagtttgacagaattcctaaattagtcctttaagtttc 35046536  T
Q  195 aaa 197  Q
    |||    
T  35046537 aaa 35046539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 256 - 338
Target Start/End: Complemental strand, 52568118 - 52568036
Alignment:
Q  256 gttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    ||||||||| ||||||||| ||  |||||||||||| || |||||||||||||||||||||||||||||||| ||||| ||||    
T  52568118 gttgacttggatcaaaatgatgcgttttaaaagctctagggtgtcaaaacgctacgtttaatggtcacaaatgatcatttata 52568036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 2909182 - 2909286
Alignment:
Q  93 cttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtt 192  Q
    |||||||||| ||| ||||   |||||||| ||||||||||| ||||| |||||| ||| |||||||||| ||||||||||||||||| || ||||| ||    
T  2909182 cttttagtttcacagaattctcaagttagttctttaagtttcgaaagtgtcaattaggttcttttagttttacagaattctcaagttagtcctttaaatt 2909281  T
Q  193 tcaaa 197  Q
    |||||    
T  2909282 tcaaa 2909286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 146 - 233
Target Start/End: Original strand, 52567743 - 52567839
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc---------aaatagatcattttagttgataaactatttcaccgttac 233  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||         |||||| |||||||||||||||||||||||||| |||||    
T  52567743 tttggtccttttagtttgacagaattcttaagttagtcatttaagtttcaaaagttttaaataggtcattttagttgataaactatttcactgttac 52567839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 115 - 197
Target Start/End: Complemental strand, 35046642 - 35046560
Alignment:
Q  115 aagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    |||||||| ||||||||||| ||||||| ||||||| | ||||||||||||| ||||| ||||||| || |||||||||||||    
T  35046642 aagttagtgctttaagtttcgaaagttttaatttggccattttagtttgacataattcccaagttagtcctttaagtttcaaa 35046560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 243 - 333
Target Start/End: Complemental strand, 52182100 - 52182011
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    |||||||||||||||||||||  ||||||||| ||||||||||||||||||| || |||||||  || ||||||| ||||||||| |||||    
T  52182100 tagccgttaagttgttgacttaaatcaaaatgatgtcttttaaaagctccagggt-tcaaaacattatgtttaatagtcacaaatgatcat 52182011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 42116129 - 42116076
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagttt 142  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||    
T  42116129 ggtcattttagtttgacaaaatttttaagttagtcctttaagtttcaaaagttt 42116076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 232
Target Start/End: Original strand, 8408354 - 8408497
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattt- 187  Q
    ||||||||||||||||||||||||| |||||||| ||||||||||||||         | | |||||||||||||||| ||||||||||| | || |||     
T  8408354 ggtccttttagtttgacaaaatttccaagttagttctttaagtttcaaa---------tagatccttttagtttgacaaaattctcaagtaagtctttta 8408444  T
Q  188 --------aagtttcaaatagatcattttagttgataaactatttcaccgtta 232  Q
            ||||||||||||  |||||||||||||||| ||||||||||||||    
T  8408445 agtttgaaaagtttcaaataagtcattttagttgataagctatttcaccgtta 8408497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 243 - 333
Target Start/End: Original strand, 8408533 - 8408624
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccaga-gtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    ||||| |||||||||||||||| ||||||||| || |||||| ||||| || | ||||||||||| || ||||||||||||||||| |||||    
T  8408533 tagcctttaagttgttgacttgaatcaaaatgttgccttttacaagcttcaaaggtgtcaaaacgttatgtttaatggtcacaaatgatcat 8408624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 84 - 143
Target Start/End: Original strand, 35046486 - 35046545
Alignment:
Q  84 aattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttc 143  Q
    |||||| |||||||||||||||| |||| |||| ||||||||||||||||||||||||||    
T  35046486 aattagatccttttagtttgacagaattcctaaattagtcctttaagtttcaaaagtttc 35046545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 90 - 145
Target Start/End: Original strand, 52181779 - 52181834
Alignment:
Q  90 gtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    ||||||||||||||||| |||| | |||||||||||||||||||||||||||||||    
T  52181779 gtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaa 52181834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 2508267 - 2508321
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    |||||||||||||||| |||||| |||||||||||||||| ||||||||||||||    
T  2508267 tccttttagtttgacagaatttccaagttagtcctttaagcttcaaaagtttcaa 2508321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 246 - 332
Target Start/End: Original strand, 30542815 - 30542901
Alignment:
Q  246 ccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatca 332  Q
    ||||||||||||| ||||  || |||||| ||| |||||||| ||| || ||||||||||||||||||||||| |||||||| ||||    
T  30542815 ccgttaagttgttaacttagattaaaatgttgtattttaaaaactctagggtgtcaaaacgctacgtttaatgatcacaaataatca 30542901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 128 - 197
Target Start/End: Original strand, 26329805 - 26329874
Alignment:
Q  128 aagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    ||||||| |||||||||||| |||||||||||||||||||||||  |||||||  | |||||||||||||    
T  26329805 aagtttcgaaagtttcaattaggtccttttagtttgacagaatttccaagttagccctttaagtttcaaa 26329874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 48 - 137
Target Start/End: Original strand, 41735834 - 41735923
Alignment:
Q  48 aattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaa 137  Q
    |||||| || |||||| ||| |||| ||| ||| |||| |||||||||||||||||||| |||||| |||| |||||||||| |||||||    
T  41735834 aattcccaagttagtcctttaagtttcaaaagtttcaaataggtccttttagtttgacagaatttccaagtcagtcctttaaatttcaaa 41735923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 146 - 235
Target Start/End: Complemental strand, 52866418 - 52866330
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    |||||| |||||||||||||||||||| ||||||| || ||||||||||||| |  || ||||||||||| ||||||  |||||||||||    
T  52866418 tttggttcttttagtttgacagaattcccaagttagtcctttaagtttcaaaaatgtccttttagttgat-aactatgccaccgttaccc 52866330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 145
Target Start/End: Original strand, 5387141 - 5387245
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    ||||| ||||| |||| |||||| ||| ||||  || ||| |||||||  || ||||||||||||| |||| | ||||||| ||||||||||||||||||    
T  5387141 ttgactgaatttctaagttagtcctttaagttttaaaagtttcaattatatcattttagtttgacagaattcccaagttagccctttaagtttcaaaagt 5387240  T
Q  141 ttcaa 145  Q
    |||||    
T  5387241 ttcaa 5387245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 151 - 230
Target Start/End: Complemental strand, 36890706 - 36890618
Alignment:
Q  151 tccttttagtttgacagaattctcaagttaatcatttaagtttca---------aatagatcattttagttgataaactatttcaccgt 230  Q
    ||||||||||||||||||||| | ||||||||||||||||||| |         ||||| |||||||||||||||||||||||||||||    
T  36890706 tccttttagtttgacagaatttttaagttaatcatttaagttttaaaagtttataataggtcattttagttgataaactatttcaccgt 36890618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 41735756 - 41735863
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||| |||| |||   |||||||| |||| |||||  |||||||||| | |||||||||||||| ||| ||||| ||||||| || ||||    
T  41735756 ggtccttttagtttaacaagattctcaagttagttcttttagttttgaaagtttcaact-ggtccttttagtttaacataattcccaagttagtccttta 41735854  T
Q  189 agtttcaaa 197  Q
    |||||||||    
T  41735855 agtttcaaa 41735863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 52567746 - 52567818
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    |||||||||||||||||| ||||  |||||||||| |||||||||||||||||| || | |||| ||||||||    
T  52567746 ggtccttttagtttgacagaattcttaagttagtcatttaagtttcaaaagttttaaataggtcattttagtt 52567818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 161
Target Start/End: Original strand, 22025109 - 22025188
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    ||||||||||| ||||||||||||| ||||  ||||||||||| ||||| || ||||||||||| | ||| |||||||||    
T  22025109 tcaattaggtcattttagtttgacagaattcttaagttagtccgttaagattaaaaagtttcaaataggttcttttagtt 22025188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 93 - 212
Target Start/End: Complemental strand, 23085323 - 23085205
Alignment:
Q  93 cttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtt 192  Q
    |||||||||||||| || || |||||||||| ||||||||||||||||||||||| |   |||||||||| | |||||| |||| ||| || ||||| ||    
T  23085323 cttttagtttgacagaaattttaagttagtc-tttaagtttcaaaagtttcaattagaatcttttagttttatagaattttcaaattagtcctttaaatt 23085225  T
Q  193 tcaaatagatcattttagtt 212  Q
    | |||||  || ||||||||    
T  23085224 ttaaataagtctttttagtt 23085205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 90 - 137
Target Start/End: Complemental strand, 44916371 - 44916324
Alignment:
Q  90 gtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaa 137  Q
    |||||||||||||||||||||||  |||||||||||||||||||||||    
T  44916371 gtccttttagtttgacaaaattttcaagttagtcctttaagtttcaaa 44916324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 146 - 212
Target Start/End: Original strand, 8408351 - 8408417
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaatagatcattttagtt 212  Q
    ||||||||||||||||||||| ||||  ||||||| |  ||||||||||||||||||| ||||||||    
T  8408351 tttggtccttttagtttgacaaaatttccaagttagttctttaagtttcaaatagatccttttagtt 8408417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 8408984 - 8408936
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    ||||||| ||||||||||||| ||||||||||||| |||||||||||||    
T  8408984 tttggtcattttagtttgacataattctcaagttagtcatttaagtttc 8408936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 94 - 142
Target Start/End: Complemental strand, 35046603 - 35046555
Alignment:
Q  94 ttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagttt 142  Q
    ||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  35046603 ttttagtttgacataattcccaagttagtcctttaagtttcaaaagttt 35046555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 247 - 327
Target Start/End: Original strand, 52567879 - 52567958
Alignment:
Q  247 cgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaat 327  Q
    ||||||||| ||| |||| ||||||||| |||||||||||| || ||| ||||||||||| || | |||||||||||||||    
T  52567879 cgttaagttattgtcttggatcaaaatgttgtcttttaaaaacttcagggtgtcaaaacgttatg-ttaatggtcacaaat 52567958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 19632309 - 19632259
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    ||||||||||||||||||||||||||||||| ||| || |||||||||||||    
T  19632309 tttggtccttttagtttgacagaattctcaaattagtc-tttaagtttcaaa 19632259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 19681304 - 19681347
Alignment:
Q  192 ttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||    
T  19681304 ttcaaataggtcattttagttgataaactatttcaccattaccc 19681347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 230
Target Start/End: Original strand, 22025103 - 22025206
Alignment:
Q  136 aaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattt---------aagtttcaaatagatcattttagttgataaactatttca 226  Q
    |||||||||||| |||| |||||||||||||||||||| |||||| ||  ||         ||||||||||||| |  ||||||||||||||||||||||    
T  22025103 aaagtttcaattaggtcattttagtttgacagaattcttaagttagtccgttaagattaaaaagtttcaaataggttcttttagttgataaactatttca 22025202  T
Q  227 ccgt 230  Q
    ||||    
T  22025203 ccgt 22025206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 161
Target Start/End: Original strand, 31229315 - 31229390
Alignment:
Q  86 ttaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    ||||||| ||||||||||| | ||||   ||||||||| ||||||||||||||||||||| | ||| |||||||||    
T  31229315 ttaggtctttttagtttgatagaattctcaagttagtcatttaagtttcaaaagtttcaaataggttcttttagtt 31229390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 145
Target Start/End: Complemental strand, 52568263 - 52568200
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    ||||||||||| ||||||||||| | ||||   |||| ||||||||||||||||||||||||||    
T  52568263 tcaattaggtcattttagtttgatagaattctcaagtcagtcctttaagtttcaaaagtttcaa 52568200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 90 - 212
Target Start/End: Original strand, 35023750 - 35023872
Alignment:
Q  90 gtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaa 189  Q
    ||||||||||||||| | ||||  ||| |||||| |||| |||| ||||||||||||| | || |||||||| || | |||||| || ||| || |||||    
T  35023750 gtccttttagtttgaaagaattattaaattagtcttttacgttttaaaagtttcaattagatcattttagttcgataaaattcttaaattagtcttttaa 35023849  T
Q  190 gtttcaaatagatcattttagtt 212  Q
     ||| |||||| || ||||||||    
T  35023850 attttaaataggtccttttagtt 35023872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 137
Target Start/End: Original strand, 36890485 - 36890583
Alignment:
Q  41 ttgacagaattcctaactt-agtcttttgagttgcaagagtgtcaattaggtcctttt-agtttgacaaaatttctaagttagtcctttaagtttcaaa 137  Q
    ||||||||||||| || || |||||||| |||| ||| ||| |||| || ||| |||| | ||||||| |||||| |||||||||||||||||||||||    
T  36890485 ttgacagaattccgaagtttagtcttttaagtttcaaaagtttcaaataagtcatttttaatttgacataatttccaagttagtcctttaagtttcaaa 36890583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 93 - 138
Target Start/End: Complemental strand, 52866411 - 52866366
Alignment:
Q  93 cttttagtttgacaaaatttctaagttagtcctttaagtttcaaaa 138  Q
    |||||||||||||| |||| | ||||||||||||||||||||||||    
T  52866411 cttttagtttgacagaattcccaagttagtcctttaagtttcaaaa 52866366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 137
Target Start/End: Complemental strand, 2789024 - 2788928
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaa 137  Q
    |||||||||||   || |||||| ||| |||| ||| ||| |||| |||||| ||||||||||||| ||||   ||||||||| |||||||||||||    
T  2789024 ttgacagaattttcaagttagtcctttaagtttcaaaagtttcaaataggtcattttagtttgacagaattctcaagttagtcatttaagtttcaaa 2788928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 138
Target Start/End: Original strand, 2909227 - 2909287
Alignment:
Q  78 agtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaa 138  Q
    |||||||||||||| |||||||||| ||| ||||   ||||||||||||||| ||||||||    
T  2909227 agtgtcaattaggttcttttagttttacagaattctcaagttagtcctttaaatttcaaaa 2909287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 19631763 - 19631811
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    ||||||||||||| ||||||| ||||||||||||| || ||||||||||    
T  19631763 tttggtccttttattttgacaaaattctcaagttagtcctttaagtttc 19631811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 52183548 - 52183500
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    ||||||||||||||||| ||| ||||||||||||| || ||||||||||    
T  52183548 tttggtccttttagttttacaaaattctcaagttagtcctttaagtttc 52183500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 161
Target Start/End: Complemental strand, 2508751 - 2508684
Alignment:
Q  94 ttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    ||||| ||||| ||||||| ||||||| |||||||| |||||||||||| || |  ||||||||||||    
T  2508751 ttttaatttgataaaatttttaagttactcctttaaatttcaaaagttttaaatatgtccttttagtt 2508684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 82 - 145
Target Start/End: Original strand, 8408398 - 8408461
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    |||| ||| |||||||||||||||||||||   |||| |||| ||||||||| |||||||||||    
T  8408398 tcaaatagatccttttagtttgacaaaattctcaagtaagtcttttaagtttgaaaagtttcaa 8408461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 248 - 327
Target Start/End: Complemental strand, 30543064 - 30542985
Alignment:
Q  248 gttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaat 327  Q
    ||||| ||||||||||  ||||||| | || |||||||||||| ||  ||||||||||  |||||||||||||| |||||    
T  30543064 gttaaattgttgacttaaatcaaaacgttgacttttaaaagcttcatggtgtcaaaacattacgtttaatggtcgcaaat 30542985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 36890706 - 36890655
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagttt 142  Q
    |||||||||||||||| ||||| ||||||| || ||||||||| ||||||||    
T  36890706 tccttttagtttgacagaatttttaagttaatcatttaagttttaaaagttt 36890655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 252 - 327
Target Start/End: Complemental strand, 42115991 - 42115917
Alignment:
Q  252 agttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaat 327  Q
    ||||| ||||||| ||||||| ||||| ||||||   |||||| ||||||||||||||||||||||| || |||||    
T  42115991 agttgatgacttggatcaaaacgctgtgttttaagt-ctccagggtgtcaaaacgctacgtttaatgatctcaaat 42115917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 52183492 - 52183437
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaa 137  Q
    ||||||||| ||||||||||||||| |||| | |||  ||||||||||||||||||    
T  52183492 tcaattaggcccttttagtttgacagaattcccaagccagtcctttaagtttcaaa 52183437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 246 - 333
Target Start/End: Complemental strand, 52866292 - 52866206
Alignment:
Q  246 ccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    ||||||||||||| ||||| ||||||| | |   ||||||||||||||| ||||||||||  || ||||||| ||||||||| |||||    
T  52866292 ccgttaagttgttcacttggatcaaaacgtttctttttaaaagctccagggtgtcaaaacatta-gtttaatcgtcacaaatgatcat 52866206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 180
Target Start/End: Original strand, 22025066 - 22025100
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagtta 180  Q
    ||||||||||||||||||||||||||| |||||||    
T  22025066 tttggtccttttagtttgacagaattcccaagtta 22025100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 226
Target Start/End: Original strand, 30542731 - 30542769
Alignment:
Q  188 aagtttcaaatagatcattttagttgataaactatttca 226  Q
    |||||||||| ||||| ||||||||||||||||||||||    
T  30542731 aagtttcaaacagatccttttagttgataaactatttca 30542769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 172
Target Start/End: Original strand, 19681222 - 19681279
Alignment:
Q  115 aagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattc 172  Q
    ||||||||  |||||||||| ||| |||||||| | || |||||||||||||||||||    
T  19681222 aagttagttttttaagtttcgaaattttcaattagatcattttagtttgacagaattc 19681279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 179
Target Start/End: Original strand, 26329776 - 26329809
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagtt 179  Q
    ||||||||||||| ||||||||||||||||||||    
T  26329776 tttggtccttttaatttgacagaattctcaagtt 26329809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 197
Target Start/End: Original strand, 36890478 - 36890583
Alignment:
Q  94 ttttagtttgacaaaatttctaagtt-agtcctttaagtttcaaaagtttcaatttggtc-cttttagtttgacagaattctcaagttaatcatttaagt 191  Q
    |||| |||||||| |||| | ||||| |||| ||||||||||||||||||||| |  |||  ||||| ||||||| ||||  ||||||| || |||||||    
T  36890478 ttttggtttgacagaattccgaagtttagtcttttaagtttcaaaagtttcaaataagtcatttttaatttgacataatttccaagttagtcctttaagt 36890577  T
Q  192 ttcaaa 197  Q
    ||||||    
T  36890578 ttcaaa 36890583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 271 - 315
Target Start/End: Original strand, 5387339 - 5387382
Alignment:
Q  271 aatgctgtcttttaaaagctccagagtgtcaaaacgctacgttta 315  Q
    ||||||| |||||||||||||||| |||||||||||||| |||||    
T  5387339 aatgctgccttttaaaagctccag-gtgtcaaaacgctatgttta 5387382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 145
Target Start/End: Original strand, 9320025 - 9320129
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    |||||| |||||  || ||||| |||| |||| | | ||| ||||||| || |||||||||||||| ||||   || |||||| ||||| ||||||||||    
T  9320025 ttgacaaaattctcaagttagttttttaagtttcgaaagtttcaattaagttcttttagtttgacagaattctcaatttagtcatttaaatttcaaaagt 9320124  T
Q  141 ttcaa 145  Q
    |||||    
T  9320125 ttcaa 9320129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 216
Target Start/End: Original strand, 26709513 - 26709553
Alignment:
Q  176 agttaatcatttaagtttcaaatagatcattttagttgata 216  Q
    |||||||| ||||||||||||||||||| ||| ||||||||    
T  26709513 agttaatcctttaagtttcaaatagatcgtttaagttgata 26709553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 52181840 - 52181872
Alignment:
Q  202 tcattttagttgataaactatttcaccgttacc 234  Q
    |||||||| ||||||||||||||||||||||||    
T  52181840 tcattttaattgataaactatttcaccgttacc 52181872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 1e-44; HSPs: 145)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 89 - 212
Target Start/End: Complemental strand, 31893597 - 31893474
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||| || ||||    
T  31893597 ggtccttttagtttgacagaatttctaagttagtcctttaagttttaaaagtttcaattaggtccttttagtttgacagaattctcaagttagtccttta 31893498  T
Q  189 agtttcaaatagatcattttagtt 212  Q
    |||||||||||  || ||||||||    
T  31893497 agtttcaaataagtccttttagtt 31893474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 1441554 - 1441408
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||||||| |||| | |||||||||||||| ||||| |||||||||||| |||| ||||||||||| ||||||| ||||||| || ||||    
T  1441554 ggtccttttagtttgacataattcccaagttagtcctttaggtttcgaaagtttcaattaggtcattttagtttgatagaattcccaagttagtctttta 1441455  T
Q  189 agtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    |||||||||||| || ||||||||||||||||||||||| |||||||    
T  1441454 agtttcaaataggtccttttagttgataaactatttcactgttaccc 1441408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 5559738 - 5559594
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    ||||||||||||||||||||||| | ||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||| ||||||| || ||||    
T  5559738 ggtccttttagtttgacaaaattcccaagttagtcctttaagttttaaa-gtttcaattaggtccttttagtttgacagaattcccaagttagtccttta 5559640  T
Q  189 agtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    |||||||||||  || ||||||||||| |||||||||||||||||||    
T  5559639 agtttcaaataagtctttttagttgat-aactatttcaccgttaccc 5559594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 91 - 235
Target Start/End: Original strand, 35214811 - 35214965
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtccttt-aagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaa 189  Q
    |||||||||||||||| ||||||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| || |||||    
T  35214811 tccttttagtttgacagaatttctaagttagttcttttaagtttcaaaagtttcaattaggtccttttagtttgacagaattctcaagttagtcttttaa 35214910  T
Q  190 g---------tttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    |         |||||||||| || |||||||||||||||||||||||||||||||    
T  35214911 gtttcaaaaatttcaaataggtctttttagttgataaactatttcaccgttaccc 35214965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 39958690 - 39958836
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| || ||||||||||||  ||| ||||||||||||||||||| ||   ||||| ||||    
T  39958690 ggtccttttagtttgacataatttttaagttagtcatttaagtctcgaaagtttcaattaagtcattttagtttgacagaattcccattctaatccttta 39958789  T
Q  189 agtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    |||||||||||| || |||||||||||||||||||||||| ||||||    
T  39958790 agtttcaaataggtccttttagttgataaactatttcaccattaccc 39958836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 93 - 227
Target Start/End: Original strand, 31893257 - 31893391
Alignment:
Q  93 cttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtt 192  Q
    |||||||||||||| ||||   ||||||||  |||||||||| |||||||||||| |||| |||||||||||||||||||  |||||| || ||||||||    
T  31893257 cttttagtttgacagaattctcaagttagttttttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcctaagttagtcttttaagtt 31893356  T
Q  193 tcaaatagatcattttagttgataaactatttcac 227  Q
    |||||||| |||||||||| |||||||||||||||    
T  31893357 tcaaataggtcattttagtcgataaactatttcac 31893391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 5805041 - 5805149
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||||||| ||||   |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| || || ||||    
T  5805041 ggtccttttagtttgacagaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaattctcaagctattccttta 5805140  T
Q  189 agtttcaaa 197  Q
    |||||||||    
T  5805141 agtttcaaa 5805149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 8040267 - 8040122
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||| ||  |||||| || |||||| |||||||||||||| |||||| | | ||||||||| |||||||||| | ||||||| || ||||    
T  8040267 ggtccttttagtttaacggaatttccaaattagtcttttaagtttcaaaaatttcaaatagatccttttagcttgacagaatcc-caagttagtccttta 8040169  T
Q  189 agtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    |||||||||||| || ||||||||||| |||||||||||||||||||    
T  8040168 agtttcaaataggtccttttagttgatgaactatttcaccgttaccc 8040122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 5805714 - 5805607
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||||||||||||| |||||||||| |||||||||  ||||||||||||  |||||||||||||||| ||||| ||||||||||| ||||    
T  5805714 ggtccttttagtttgacaaaattt-taagttagtcatttaagttttgaaagtttcaattatgtccttttagtttgactgaattttcaagttaatctttta 5805616  T
Q  189 agtttcaaa 197  Q
    |||||||||    
T  5805615 agtttcaaa 5805607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 41 - 197
Target Start/End: Original strand, 21412881 - 21413037
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    |||||||||||| ||| ||| || ||| ||||   | ||| |||||||| |||||||||||||||| |||||  ||||||||||||||||||||||||||    
T  21412881 ttgacagaattcttaagttaatcctttaagttttgaaagtttcaattagatccttttagtttgacagaattttcaagttagtcctttaagtttcaaaagt 21412980  T
Q  141 ttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    || || | | || ||||||||| ||||||||||||||||| || |||||||||||||    
T  21412981 tttaaatagatcattttagtttcacagaattctcaagttagtcttttaagtttcaaa 21413037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 41 - 197
Target Start/End: Complemental strand, 33879625 - 33879470
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    ||||||||||||  || |||||| ||| |||| | | ||| ||||||||||||||||| ||||||| |||||| |||||| |||||||||||||||||||    
T  33879625 ttgacagaattcacaagttagtcctttaagtttcgaaagtttcaattaggtccttttaatttgacagaatttccaagttaatcctttaagtttcaaaagt 33879526  T
Q  141 ttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    ||||| | ||||||||||||| |||| ||||| ||||||| ||  ||||||||||||    
T  33879525 ttcaaataggtccttttagttcgacataattcccaagttagtc-cttaagtttcaaa 33879470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 33879637 - 33879529
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||||||| ||||   |||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||  |||||||||| ||||    
T  33879637 ggtccttttagtttgacagaattcacaagttagtcctttaagtttcgaaagtttcaattaggtccttttaatttgacagaatttccaagttaatccttta 33879538  T
Q  189 agtttcaaa 197  Q
    |||||||||    
T  33879537 agtttcaaa 33879529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 41 - 197
Target Start/End: Complemental strand, 34951571 - 34951415
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    |||||||||||   || |||||| ||| |||| | | ||| |||||||| |||||||||||||||| ||||||||| | |||||||||||||||||||||    
T  34951571 ttgacagaattatcaagttagtcctttaagtttcgaaagtttcaattagatccttttagtttgacacaatttctaaatcagtcctttaagtttcaaaagt 34951472  T
Q  141 ttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
     | || |  | ||||||||||||||| ||||||||||||| ||||||||||||||||    
T  34951471 ataaaatatgaccttttagtttgacacaattctcaagttagtcatttaagtttcaaa 34951415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 21433149 - 21433255
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaag 190  Q
    |||||||||||||||||||||   |||||||||||||||||||| || |||||||||  ||||||||||||||| ||||||| ||||||| |||||||||    
T  21433149 tccttttagtttgacaaaattcacaagttagtcctttaagtttcgaatgtttcaattaagtccttttagtttgaaagaattcccaagttagtcatttaag 21433248  T
Q  191 tttcaaa 197  Q
    |||||||    
T  21433249 tttcaaa 21433255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 247 - 338
Target Start/End: Complemental strand, 5559556 - 5559465
Alignment:
Q  247 cgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    |||||||||||||| ||  |||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||||    
T  5559556 cgttaagttgttgagtttgatcaaaatgctgccttttaaaagctccagggtgtcaaaacgctacgtttaatggtcacaaataatcatttata 5559465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 90 - 197
Target Start/End: Original strand, 21412870 - 21412977
Alignment:
Q  90 gtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaa 189  Q
    ||||||||||||||||| ||||  ||||||| ||||||||||||  |||||||||||| | ||||||||||||||||||||| |||||||| || |||||    
T  21412870 gtccttttagtttgacagaattcttaagttaatcctttaagttttgaaagtttcaattagatccttttagtttgacagaattttcaagttagtcctttaa 21412969  T
Q  190 gtttcaaa 197  Q
    ||||||||    
T  21412970 gtttcaaa 21412977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 90 - 235
Target Start/End: Original strand, 8039667 - 8039804
Alignment:
Q  90 gtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaa 189  Q
    ||||||||||||||||| ||||   |||||||| ||||||||||| |||||||||||| |||||||||||||||| |||||    |||||  |||   ||    
T  8039667 gtccttttagtttgacataattctcaagttagttctttaagtttcgaaagtttcaattaggtccttttagtttgaaagaat----aagtt--tca--aaa 8039758  T
Q  190 gtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    ||||||||||| || |||||||||||||||||||||||||||||||    
T  8039759 gtttcaaataggtccttttagttgataaactatttcaccgttaccc 8039804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 91 - 197
Target Start/End: Complemental strand, 22876972 - 22876867
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaag 190  Q
    |||||||||||||||| |||||| |||||| |  |||||||||| ||||||||||||  ||| |||||||||||||||||||||||||||||| ||||||    
T  22876972 tccttttagtttgacataatttccaagttaatt-tttaagtttcgaaagtttcaattaagtcattttagtttgacagaattctcaagttaatcctttaag 22876874  T
Q  191 tttcaaa 197  Q
    |||||||    
T  22876873 tttcaaa 22876867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 19925447 - 19925327
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    |||||| |||||| ||||||||| ||| |||||| | ||| | |||||| |||||||||||||||| |||| | ||||||||||||||||||||||||||    
T  19925447 ttgacaaaattcccaacttagtcctttaagttgcgaaagttttaattagatccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagt 19925348  T
Q  141 ttcaatttggtccttttagtt 161  Q
    ||||| | |||||||| ||||    
T  19925347 ttcaaataggtcctttcagtt 19925327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 19925455 - 19925351
Alignment:
Q  93 cttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtt 192  Q
    ||||||||||||||||||| | || ||||||||||||||| | ||||||| |||| | |||||||||||||||||||||| ||||||| || ||||||||    
T  19925455 cttttagtttgacaaaattcccaacttagtcctttaagttgcgaaagttttaattagatccttttagtttgacagaattcccaagttagtcctttaagtt 19925356  T
Q  193 tcaaa 197  Q
    |||||    
T  19925355 tcaaa 19925351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 39959315 - 39959207
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||||||| ||||| ||| |||||| ||||| ||| ||||||||||| | | | |||||||||||||||||||  |||||||||||||||    
T  39959315 ggtccttttagtttgacagaatttttaaattagtcatttaaatttgaaaagtttcaaatagattcttttagtttgacagaatttccaagttaatcattta 39959216  T
Q  189 agtttcaaa 197  Q
    |||||||||    
T  39959215 agtttcaaa 39959207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 20366052 - 20366205
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||| ||| ||||   |||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||| ||| ||||  |||    
T  20366052 ggtccttttagttt-acagaattctcaagttagtcctttaagtttcgaaagtttcaattatgtccttttagtttgacagaattctc-agtcaatccctta 20366149  T
Q  189 ---------agtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
             |||||||||||| || |||||||||||||||||||||||||||||||    
T  20366150 tatttcaagagtttcaaataggtctttttagttgataaactatttcaccgttaccc 20366205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 82 - 161
Target Start/End: Complemental strand, 31176025 - 31175946
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||   |||||||||||||    
T  31176025 tcaattaggtccttttagtttgacagaatttccaagttagtcctttaagtttcaaaagtttcaaagaggtccttttagtt 31175946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 41 - 176
Target Start/End: Original strand, 40904706 - 40904841
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    |||||| |||||  || |||||||||| ||||  || ||| ||||||||||||||||||||||||| |||||  || |||||| ||||||||| ||||||    
T  40904706 ttgacataattctcaagttagtcttttaagttttaaaagtttcaattaggtccttttagtttgacataattttcaaattagtcatttaagttttaaaagt 40904805  T
Q  141 ttcaatttggtccttttagtttgacagaattctcaa 176  Q
    ||||| | | |||||||| |||||||||||||||||    
T  40904806 ttcaaatagatccttttaatttgacagaattctcaa 40904841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 5559110 - 5559267
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtccttt-aagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattt 187  Q
    |||||||||| ||||||| |||| | ||||||||||||| |||||||||||||||||| | | |||||||||||||| | ||||| ||||||| || |||    
T  5559110 ggtccttttaatttgacagaattcccaagttagtccttttaagtttcaaaagtttcaaatagatccttttagtttgataaaattcccaagttagtccttt 5559209  T
Q  188 ----------aagtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
              ||||||||||||| || |||||||||||||||||||||||||||||||    
T  5559210 taagtttcaaaagtttcaaataggtccttttagttgataaactatttcaccgttaccc 5559267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 36566281 - 36566389
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctc-aagttaatcattt 187  Q
    |||||||||||||||||| ||||  |||||||||| |||||||||  |||||||||||| |||| ||||||||||||||||||||| |||||| || |||    
T  36566281 ggtccttttagtttgacagaattcttaagttagtcatttaagttttgaaagtttcaattaggtcattttagtttgacagaattctcaaagttagtc-ttt 36566379  T
Q  188 aagtttcaaa 197  Q
    ||||||||||    
T  36566380 aagtttcaaa 36566389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 41 - 197
Target Start/End: Original strand, 36566293 - 36566449
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatt-tctaagttagtcctttaagtttcaaaag 139  Q
    |||||||||||| ||| |||||| ||| ||||   | ||| ||||||||||| ||||||||||||| |||| || ||||||||| ||||||||||||||     
T  36566293 ttgacagaattcttaagttagtcatttaagttttgaaagtttcaattaggtcattttagtttgacagaattctcaaagttagtc-tttaagtttcaaaat 36566391  T
Q  140 tttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    |||||| |  ||| ||||||||||||| ||||||||||||| || ||||| |||||||    
T  36566392 tttcaaataagtcattttagtttgacaaaattctcaagttagtcctttaaatttcaaa 36566449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 90 - 234
Target Start/End: Complemental strand, 28257057 - 28256913
Alignment:
Q  90 gtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaa 189  Q
    ||||||||||||||| | ||||   ||||||||  |||||||||  ||| |||||||| |||| ||||||||||||| |||| |||||||| || |||||    
T  28257057 gtccttttagtttgatataattctaaagttagttttttaagttttgaaaatttcaattaggtcattttagtttgacaaaattttcaagttagtcctttaa 28256958  T
Q  190 gtttcaaatagatcattttagttgataaactatttcaccgttacc 234  Q
    |||| |||||  | ||||||||||||||| |||||||||| ||||    
T  28256957 gttttaaatatgttattttagttgataaattatttcaccgctacc 28256913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 41 - 197
Target Start/End: Complemental strand, 31893585 - 31893438
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    ||||||||||| |||| |||||| ||| ||||  || ||| ||||||||||||||||||||||||| ||||   |||||||||||||||||||||||       
T  31893585 ttgacagaatttctaagttagtcctttaagttttaaaagtttcaattaggtccttttagtttgacagaattctcaagttagtcctttaagtttcaaa--- 31893489  T
Q  141 ttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
          |  ||||||||||||||||| ||||||||||||| || |||||||||||||    
T  31893488 ------taagtccttttagtttgacaaaattctcaagttagtcctttaagtttcaaa 31893438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 89 - 193
Target Start/End: Original strand, 40904694 - 40904798
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    ||||||||| |||||||| ||||   ||||||||| ||||||||| ||||||||||||| |||||||||||||||||| |||| |||| ||| |||||||    
T  40904694 ggtccttttggtttgacataattctcaagttagtcttttaagttttaaaagtttcaattaggtccttttagtttgacataattttcaaattagtcattta 40904793  T
Q  189 agttt 193  Q
    |||||    
T  40904794 agttt 40904798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 90 - 197
Target Start/End: Original strand, 1286374 - 1286481
Alignment:
Q  90 gtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaa 189  Q
    ||||||||||||||| | |||||  || |||||  ||||| ||||||||||||||||| |||||||||||||||| |||||||| |||||| || |||||    
T  1286374 gtccttttagtttgatagaattttcaaattagttttttaaatttcaaaagtttcaattaggtccttttagtttgagagaattctaaagttagtcttttaa 1286473  T
Q  190 gtttcaaa 197  Q
    ||||||||    
T  1286474 gtttcaaa 1286481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 96 - 231
Target Start/End: Complemental strand, 42991122 - 42990988
Alignment:
Q  96 ttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttca 195  Q
    ||||||||| |||| ||  |||||| |||||||| ||||  |||||| |||   ||| |||||||||||||||||| ||||||||||| ||||| ||| |    
T  42991122 ttagtttgaaaaaaatttcaagttaatcctttaaatttcggaagttttaatcaagtcattttagtttgacagaattttcaagttaatc-tttaaatttta 42991024  T
Q  196 aatagatcattttagttgataaactatttcaccgtt 231  Q
    ||||| || |||||||||||||||||||||||||||    
T  42991023 aataggtctttttagttgataaactatttcaccgtt 42990988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 1346485 - 1346591
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaag 190  Q
    |||||||||||||||| ||||  ||||||||| ||||||||||| ||||||||||||   |||||||||||||||| ||||  ||||||| || ||||||    
T  1346485 tccttttagtttgacagaattcttaagttagtgctttaagtttcgaaagtttcaattaaatccttttagtttgacataatttccaagttagtcctttaag 1346584  T
Q  191 tttcaaa 197  Q
    |||||||    
T  1346585 tttcaaa 1346591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 5559122 - 5559244
Alignment:
Q  41 ttgacagaattcctaacttagtc-ttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcc-tttaagtttcaaaa 138  Q
    ||||||||||||| || |||||| |||| |||| ||| ||| |||| ||| |||||||||||||| |||||| | |||||||||| ||||||||||||||    
T  5559122 ttgacagaattcccaagttagtccttttaagtttcaaaagtttcaaatagatccttttagtttgataaaattcccaagttagtccttttaagtttcaaaa 5559221  T
Q  139 gtttcaatttggtccttttagtt 161  Q
    ||||||| | |||||||||||||    
T  5559222 gtttcaaataggtccttttagtt 5559244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 248 - 338
Target Start/End: Original strand, 20183963 - 20184053
Alignment:
Q  248 gttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    ||||||||||||||||| ||||||| | |||||||||||||||  || |||||||||| ||||||||||||||||||||| ||||| ||||    
T  20183963 gttaagttgttgacttggatcaaaacgttgtcttttaaaagcttgagggtgtcaaaaccctacgtttaatggtcacaaatgatcatttata 20184053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 235
Target Start/End: Original strand, 33235042 - 33235192
Alignment:
Q  94 ttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattt------ 187  Q
    ||||||||||||| ||||   |||||| |||||||| ||| ||||||||||||| ||||||||| |||||||||||||| |||||||  | |||          
T  33235042 ttttagtttgacagaattctcaagttaatcctttaaattttaaaagtttcaattaggtccttttggtttgacagaattcccaagttagacctttaaattt 33235141  T
Q  188 ---aagtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
       |||||||||| || ||||||||||||||||||||||||| ||||||||    
T  33235142 caaaagtttcaaagaggtcattttagttgataaactatttcatcgttaccc 33235192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 94 - 235
Target Start/End: Complemental strand, 33235668 - 33235518
Alignment:
Q  94 ttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagttt 193  Q
    ||||||||| ||| |||| |||| ||| | ||||| ||||  ||||||| ||||||||||||||||||||||| |||| |||||||| || |||||||||    
T  33235668 ttttagtttcacagaattcctaaattatttctttacgttttgaaagttttaatttggtccttttagtttgacaaaattatcaagttagtcctttaagttt 33235569  T
Q  194 ---------caaatagatcattttagttgataaactatttcaccgttaccc 235  Q
             ||||||| |||||||||||||||||||||||||| |||||||    
T  33235568 caaaaacttcaaataggtcattttagttgataaactatttcactgttaccc 33235518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 249 - 338
Target Start/End: Original strand, 5805236 - 5805325
Alignment:
Q  249 ttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    |||||||||||||||| ||||||||||||  ||||||||| || || |||||||||||||| ||||||||||||||||| ||||| ||||    
T  5805236 ttaagttgttgacttggatcaaaatgctgcattttaaaagttcgagggtgtcaaaacgctatgtttaatggtcacaaatgatcatttata 5805325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 91 - 235
Target Start/End: Original strand, 28256498 - 28256651
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattt--- 187  Q
    |||||||||||||||| |||| | |||||| | |||||| |||||||||||| ||   | |||||||||||||||||||||||||||||| || |||       
T  28256498 tccttttagtttgacagaattcccaagttacttctttaaatttcaaaagttttaaagagatccttttagtttgacagaattctcaagttagtcctttaaa 28256597  T
Q  188 ------aagtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
          ||||||||||||| |  ||||||||||||||||||||||| |||||||    
T  28256598 tttcaaaagtttcaaataggttcttttagttgataaactatttcactgttaccc 28256651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 35214821 - 35214942
Alignment:
Q  41 ttgacagaattcctaacttagt-cttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaag 139  Q
    ||||||||||| |||| ||||| ||||| |||| ||| ||| ||||||||||||||||||||||||| ||||   ||||||||| ||||||||||||||     
T  35214821 ttgacagaatttctaagttagttcttttaagtttcaaaagtttcaattaggtccttttagtttgacagaattctcaagttagtcttttaagtttcaaaaa 35214920  T
Q  140 tttcaatttggtccttttagtt 161  Q
    |||||| | |||| ||||||||    
T  35214921 tttcaaataggtctttttagtt 35214942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 41 - 145
Target Start/End: Original strand, 1346495 - 1346599
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    |||||||||||| ||| |||||  ||| |||| | | ||| |||||||  |||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  1346495 ttgacagaattcttaagttagtgctttaagtttcgaaagtttcaattaaatccttttagtttgacataatttccaagttagtcctttaagtttcaaaagt 1346594  T
Q  141 ttcaa 145  Q
    |||||    
T  1346595 ttcaa 1346599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 20366659 - 20366551
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||  ||| |||||| ||||||||||||||||||||||||||||| |   | |||||||||||||||| ||||| ||||||| || ||||    
T  20366659 ggtccttttagttaaacagaatttccaagttagtcctttaagtttcaaaagtttccaaaagatccttttagtttgacaaaattcgcaagttagtccttta 20366560  T
Q  189 agtttcaaa 197  Q
     ||||||||    
T  20366559 ggtttcaaa 20366551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 228
Target Start/End: Original strand, 23150642 - 23150790
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattt- 187  Q
    |||||||||||||||||| ||||   ||||||||||||||| |||  ||||||||||||  ||| ||||| ||||||||||||||||  ||| || |||     
T  23150642 ggtccttttagtttgacataattctcaagttagtcctttaaattttgaaagtttcaattaagtcattttaatttgacagaattctcagattagtctttta 23150741  T
Q  188 --------aagtttcaaatagatcattttagttgataaactatttcacc 228  Q
            |||||||||||| ||||||||||||||||||||||||||||    
T  23150742 agtttcaaaagtttcaaataaatcattttagttgataaactatttcacc 23150790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 27995064 - 27995172
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||||||| ||||   ||||||||  |||||||||||||| ||| || | | || ||||| |||||||||||||||||||||||| ||||    
T  27995064 ggtccttttagtttgacagaattctcaagttagtgttttaagtttcaaaaatttgaaatagatcattttaatttgacagaattctcaagttaatccttta 27995163  T
Q  189 agtttcaaa 197  Q
    |||||||||    
T  27995164 agtttcaaa 27995172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 243 - 327
Target Start/End: Original strand, 28256686 - 28256770
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaat 327  Q
    |||| ||||||||||||||||| ||||||| |||| ||||||||| ||| || ||||||||||| ||||||||||||||||||||    
T  28256686 tagcagttaagttgttgacttggatcaaaacgctgccttttaaaaactctagggtgtcaaaacgttacgtttaatggtcacaaat 28256770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 146 - 230
Target Start/End: Complemental strand, 36566577 - 36566493
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaatagatcattttagttgataaactatttcaccgt 230  Q
    |||||||| |||||||||||||||||  ||||||| || |||||||||||||||  || ||||||||||||||||||||||||||    
T  36566577 tttggtccctttagtttgacagaatttccaagttagtcttttaagtttcaaatatgtctttttagttgataaactatttcaccgt 36566493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 82 - 161
Target Start/End: Original strand, 10619856 - 10619935
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    |||||||||| |||||||||||||| ||||   ||||||||||||||||||||||||||||||| | |||||||||||||    
T  10619856 tcaattaggttcttttagtttgacacaattgtcaagttagtcctttaagtttcaaaagtttcaaataggtccttttagtt 10619935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 82 - 193
Target Start/End: Original strand, 19925161 - 19925271
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaa 181  Q
    |||||||| |||||||||||||||| |||||| || ||||||||||||||||||||| | |||| | || ||||||||||| ||||||||  |||||||     
T  19925161 tcaattagatccttttagtttgacacaatttccaa-ttagtcctttaagtttcaaaaatatcaaataggaccttttagtttaacagaatttccaagttag 19925259  T
Q  182 tcatttaagttt 193  Q
    || |||||||||    
T  19925260 tcctttaagttt 19925271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 137 - 235
Target Start/End: Complemental strand, 23679603 - 23679497
Alignment:
Q  137 aagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttc---------aaatagatcattttagttgataaactatttcac 227  Q
    ||||||||||| ||| |||||||||||||||||||||||||||| || ||||||||||         |||||||| ||||||||||||||||||||||||    
T  23679603 aagtttcaattaggttcttttagtttgacagaattctcaagttagtc-tttaagtttcaaaagtttaaaatagattattttagttgataaactatttcac 23679505  T
Q  228 cgttaccc 235  Q
    ||||||||    
T  23679504 cgttaccc 23679497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 247 - 338
Target Start/End: Complemental strand, 27995505 - 27995415
Alignment:
Q  247 cgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    |||||||||||||||||| ||||||||| || |||||||||| | ||| ||||||||||||||||||||||||||||| || ||||| ||||    
T  27995505 cgttaagttgttgacttggatcaaaatgttgccttttaaaaggttcag-gtgtcaaaacgctacgtttaatggtcacatatgatcatttata 27995415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 243 - 338
Target Start/End: Original strand, 35214999 - 35215093
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    |||||||| ||||||||||||| |||||||||||| ||||||||||||| || |||||||||  ||||||||| ||||||||||| ||||| ||||    
T  35214999 tagccgtttagttgttgacttggatcaaaatgctg-cttttaaaagctcgagggtgtcaaaatcctacgtttattggtcacaaatgatcatttata 35215093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 247 - 333
Target Start/End: Original strand, 1348837 - 1348923
Alignment:
Q  247 cgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    |||||| || |||||||| ||||||||| || |||||||||||||||| |||||| |||| |||||||||||||||||||| |||||    
T  1348837 cgttaaattattgacttggatcaaaatgttgccttttaaaagctccagggtgtcataacgttacgtttaatggtcacaaatgatcat 1348923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 243 - 338
Target Start/End: Original strand, 8039838 - 8039931
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctc-cagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    |||||||||||||||||||||  |||||||||||| ||||||||||||| ||| ||||||||||||||||||   ||||||||||| ||||| ||||    
T  8039838 tagccgttaagttgttgactttgatcaaaatgctgccttttaaaagctcgcagggtgtcaaaacgctacgtt---tggtcacaaatgatcatttata 8039931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 91 - 235
Target Start/End: Complemental strand, 35215443 - 35215290
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattt--- 187  Q
    ||||||||||||||||||||||  ||||||||||||||| |||| ||| ||||||||  ||| ||||| ||||||||||||  ||| ||| || |||       
T  35215443 tccttttagtttgacaaaattttcaagttagtcctttaaatttcgaaaatttcaattaagtcattttaatttgacagaatttccaaattagtcttttaag 35215344  T
Q  188 ------aagtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
          ||||||||||||  |||||||||||||||||||||||||  |||||||    
T  35215343 ttttaaaagtttcaaataactcattttagttgataaactatttcattgttaccc 35215290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 243 - 327
Target Start/End: Original strand, 1286560 - 1286644
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaat 327  Q
    |||||||||||||||||||||| ||| |||  ||   ||||||||||||||| |||||||||||||| |||||||||||||||||    
T  1286560 tagccgttaagttgttgacttggatccaaacactactttttaaaagctccagggtgtcaaaacgctatgtttaatggtcacaaat 1286644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 93 - 235
Target Start/End: Complemental strand, 1349269 - 1349115
Alignment:
Q  93 cttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagtt---aatcattt-- 187  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||| || |   || ||||||||||||||||||  ||| ||   | || |||      
T  1349269 cttttagtttgacataatttctaagttagtcttttaagtttcaaaagttttaaataaatcattttagtttgacagaatttccaacttataagtcctttaa 1349170  T
Q  188 -------aagtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
           ||||||||||||| |||||||||||||||||| |||||||||||||||    
T  1349169 gtttcaaaagtttcaaataggtcattttagttgataaaccatttcaccgttaccc 1349115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 5805053 - 5805173
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    ||||||||||||  || |||||| ||| |||| | | ||| ||||||||||||||||||||||||| ||||   ||| || |||||||||||||||||||    
T  5805053 ttgacagaattctcaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaattctcaagctattcctttaagtttcaaaagt 5805152  T
Q  141 ttcaatttggtccttttagtt 161  Q
    || || | |||||||||||||    
T  5805153 tttaactaggtccttttagtt 5805173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 10620344 - 10620201
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||| ||||||  ||||  ||||||||||||   | | || |||||||||||| || ||||||||||| ||||||||  ||||| | || ||||    
T  10620344 ggtccttttattttgactgaattcttaagttagtcct---aatatcgaaagtttcaattaggcccttttagtttaacagaatttccaagtaagtccttta 10620248  T
Q  189 agtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    |||||||||||  | ||||||||||||||| |||| |||||||||||    
T  10620247 agtttcaaataagttattttagttgataaattattccaccgttaccc 10620201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 19925108 - 19925215
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||| ||||||||||||| |||||| |||||| ||||| ||||||| |||||||||||| | |||||||||||||||| |||| || | ||| || ||||    
T  19925108 ggtctttttagtttgacagaatttccaagttactccttcaagtttcgaaagtttcaattagatccttttagtttgacacaatt-tccaattagtccttta 19925206  T
Q  189 agtttcaaa 197  Q
    |||||||||    
T  19925207 agtttcaaa 19925215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 82 - 197
Target Start/End: Complemental strand, 21433403 - 21433287
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaa 181  Q
    ||||||| ||| ||||||||||||| |||| | |||||| |||||||||||||||||||||||| |  ||  |||| |||||||||||||| |||||||     
T  21433403 tcaattacgtcattttagtttgacagaattcccaagttaatcctttaagtttcaaaagtttcaaataagttatttttgtttgacagaattcccaagttag 21433304  T
Q  182 t-catttaagtttcaaa 197  Q
    | | |||||||||||||    
T  21433303 tacttttaagtttcaaa 21433287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 161
Target Start/End: Complemental strand, 21413177 - 21413099
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    ||||||||| ||||||| ||||||| |||||||||||||||  ||||||||||||||||||||| | |||||||||||||    
T  21413177 tcaattaggcccttttaatttgacagaatttctaagttagtt-tttaagtttcaaaagtttcaaataggtccttttagtt 21413099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 197
Target Start/End: Complemental strand, 31176053 - 31175970
Alignment:
Q  114 taagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    ||||||| |||||||| |||  |||||||||||| |||||||||||||||||||||||  ||||||| || |||||||||||||    
T  31176053 taagttaatcctttaatttttgaaagtttcaattaggtccttttagtttgacagaatttccaagttagtcctttaagtttcaaa 31175970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 94 - 197
Target Start/End: Original strand, 34951236 - 34951338
Alignment:
Q  94 ttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagttt 193  Q
    |||||||||||||| ||| | ||  ||||| |||||||||| |||||||||||| ||||||||| |||||||| |||||| |||||| || |||||||||    
T  34951236 ttttagtttgacaatattcccaacatagtc-tttaagtttcgaaagtttcaattaggtccttttcgtttgacataattcttaagttagtcctttaagttt 34951334  T
Q  194 caaa 197  Q
    ||||    
T  34951335 caaa 34951338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 145
Target Start/End: Original strand, 34951283 - 34951346
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    |||||||||||||||| |||||||| ||||  ||||||||||||||||||||||||||||||||    
T  34951283 tcaattaggtccttttcgtttgacataattcttaagttagtcctttaagtttcaaaagtttcaa 34951346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 243 - 317
Target Start/End: Original strand, 5075475 - 5075549
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaat 317  Q
    |||||||||||||||||||||| ||||||| ||||  |||||||||||| || ||||||||||| ||||||||||    
T  5075475 tagccgttaagttgttgacttggatcaaaacgctgcattttaaaagctcgagggtgtcaaaacgttacgtttaat 5075549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 249 - 327
Target Start/End: Original strand, 5559307 - 5559385
Alignment:
Q  249 ttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaat 327  Q
    |||||||||||||||| ||||||| || | ||||||||| |||||| ||||||||||| |||| |||||||||||||||    
T  5559307 ttaagttgttgacttggatcaaaacgccgccttttaaaatctccagggtgtcaaaacgttacggttaatggtcacaaat 5559385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 243 - 333
Target Start/End: Complemental strand, 5805486 - 5805396
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    ||||| |||||||||||||||| ||||||| ||||||||||||||| || || ||||||||||  ||||| |||| ||||||||| |||||    
T  5805486 tagcctttaagttgttgacttggatcaaaacgctgtcttttaaaagttctagggtgtcaaaactttacgtgtaatcgtcacaaatgatcat 5805396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 247 - 333
Target Start/End: Original strand, 20366243 - 20366329
Alignment:
Q  247 cgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    |||||||||||||| ||  ||||||||| || |||||||||| | ||| || ||||||| |||||||||||||||||||||||||||    
T  20366243 cgttaagttgttgattttgatcaaaatgttgccttttaaaagtttcagggtatcaaaacactacgtttaatggtcacaaattatcat 20366329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 245 - 327
Target Start/End: Original strand, 27995255 - 27995337
Alignment:
Q  245 gccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaat 327  Q
    |||||||||||||||||||  |||||||||||  || ||||||||| ||| ||||||||| | ||||||||||||||||||||    
T  27995255 gccgttaagttgttgactttgatcaaaatgcttcctattaaaagcttcagggtgtcaaaatgttacgtttaatggtcacaaat 27995337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 89 - 171
Target Start/End: Complemental strand, 34951583 - 34951501
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaatt 171  Q
    |||| ||||||||||||| ||||   |||||||||||||||||||| |||||||||||| | |||||||||||||||| ||||    
T  34951583 ggtctttttagtttgacagaattatcaagttagtcctttaagtttcgaaagtttcaattagatccttttagtttgacacaatt 34951501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 91 - 197
Target Start/End: Complemental strand, 41020242 - 41020137
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaag 190  Q
    |||||||||||||||| |||||| ||||||||  |||||||||  ||||||| |||| | |||||||||||||||||||||   ||||||||  ||||||    
T  41020242 tccttttagtttgacataatttccaagttagtt-tttaagttttgaaagttttaattagatccttttagtttgacagaatttctaagttaattctttaag 41020144  T
Q  191 tttcaaa 197  Q
    |||||||    
T  41020143 tttcaaa 41020137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 115 - 180
Target Start/End: Original strand, 5075377 - 5075441
Alignment:
Q  115 aagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagtta 180  Q
    ||||||||||||||||||| |||||||||||||  ||||||||| |||||||||||||||||||||    
T  5075377 aagttagtcctttaagttttaaaagtttcaattgagtcctttta-tttgacagaattctcaagtta 5075441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 115 - 197
Target Start/End: Complemental strand, 29591152 - 29591068
Alignment:
Q  115 aagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagt--taatcatttaagtttcaaa 197  Q
    |||||||||||||||||||||||||||| |||| |||| ||||||||||||| ||| | |||||  ||||| |||||||||||||    
T  29591152 aagttagtcctttaagtttcaaaagttttaattaggtcattttagtttgacaaaatccgcaagttataatcctttaagtttcaaa 29591068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 247 - 323
Target Start/End: Complemental strand, 1349077 - 1349001
Alignment:
Q  247 cgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcac 323  Q
    |||||||||||||||||  ||||||| |||| |||||||||| | ||||||||||||||| ||||||||||| ||||    
T  1349077 cgttaagttgttgactttgatcaaaacgctgccttttaaaagtttcagagtgtcaaaacgttacgtttaatgatcac 1349001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 137
Target Start/End: Complemental strand, 5559726 - 5559631
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaa 137  Q
    |||||| |||||| || |||||| ||| ||||  || ||| ||||||||||||||||||||||||| |||| | |||||||||||||||||||||||    
T  5559726 ttgacaaaattcccaagttagtcctttaagttttaa-agtttcaattaggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaa 5559631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 137
Target Start/End: Original strand, 31893265 - 31893361
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaa 137  Q
    ||||||||||||  || ||||| |||| |||| | | ||| ||||||||||| ||||||||||||| |||| ||||||||||| |||||||||||||    
T  31893265 ttgacagaattctcaagttagttttttaagtttcgaaagtttcaattaggtcattttagtttgacagaattcctaagttagtcttttaagtttcaaa 31893361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 93 - 193
Target Start/End: Original strand, 42990507 - 42990607
Alignment:
Q  93 cttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtt 192  Q
    ||||||||| || | ||||| ||| ||||||||||||||||  ||||||| |||| |||| |||||||| ||||||||| ||||||||||  ||||||||    
T  42990507 cttttagttggaaagaatttttaaattagtcctttaagttttgaaagttttaattaggtcattttagttcgacagaattttcaagttaattttttaagtt 42990606  T
Q  193 t 193  Q
    |    
T  42990607 t 42990607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 243 - 327
Target Start/End: Complemental strand, 42990950 - 42990866
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaat 327  Q
    |||||||||||||||||||||| ||||||||||||  |||||||| ||| || |||| |||||||||| |||||| |||| ||||    
T  42990950 tagccgttaagttgttgacttggatcaaaatgctgaattttaaaaactcaagggtgttaaaacgctacatttaatagtcataaat 42990866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 82 - 161
Target Start/End: Original strand, 1286426 - 1286505
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    ||||||||||||||||||||||| | ||||   ||||||||| ||||||||||||||||||||| | ||| |||||||||    
T  1286426 tcaattaggtccttttagtttgagagaattctaaagttagtcttttaagtttcaaaagtttcaaataggttcttttagtt 1286505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 244 - 327
Target Start/End: Complemental strand, 39959125 - 39959042
Alignment:
Q  244 agccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaat 327  Q
    ||||||||||||||||||||| ||||||| |||| ||| || ||| | |||  |||||||||| ||||||||||||||||||||    
T  39959125 agccgttaagttgttgacttggatcaaaacgctgccttgtagaagtttcaggatgtcaaaacgttacgtttaatggtcacaaat 39959042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 95 - 197
Target Start/End: Original strand, 4187515 - 4187617
Alignment:
Q  95 tttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    |||||||||||| ||||  ||| ||| ||||||||||||  |||||||||||| ||| ||||| |||||||| ||||| ||||||| |  ||||||||||    
T  4187515 tttagtttgacagaattcataaattaatcctttaagtttagaaagtttcaattaggtactttttgtttgacataattcccaagttagttctttaagtttc 4187614  T
Q  195 aaa 197  Q
    |||    
T  4187615 aaa 4187617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 161
Target Start/End: Complemental strand, 20366597 - 20366527
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    |||||||||||||||||||||   |||||||||||||| |||||||||||||||| |  ||||||||||||    
T  20366597 tccttttagtttgacaaaattcgcaagttagtcctttaggtttcaaaagtttcaaatatgtccttttagtt 20366527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 21433200 - 21433282
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttga 164  Q
    ||||||| ||||||||||||||| | |||| | ||||||||| ||||||||||||||||||||| |  || ||||||||||||    
T  21433200 tcaattaagtccttttagtttgaaagaattcccaagttagtcatttaagtttcaaaagtttcaaataagttcttttagtttga 21433282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 249 - 343
Target Start/End: Original strand, 33235232 - 33235326
Alignment:
Q  249 ttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctatattgtt 343  Q
    ||||||||||||| ||  |||||||  || |||||||||| || || ||||||||| |||||||||||||||||||||| ||||| |||| ||||    
T  33235232 ttaagttgttgacgtgcgtcaaaatattgccttttaaaagttctagggtgtcaaaatgctacgtttaatggtcacaaatgatcatttatagtgtt 33235326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 333
Target Start/End: Complemental strand, 33235484 - 33235394
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    ||||||| |||||||||||||| |||||||||  |  ||||||||||| ||| ||| ||||| | |||||||||||||||||||| |||||    
T  33235484 tagccgtcaagttgttgacttggatcaaaatgtcgcattttaaaagcttcagggtgccaaaatgttacgtttaatggtcacaaatgatcat 33235394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 333
Target Start/End: Original strand, 42990692 - 42990782
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    |||||||||||||||||||||| ||||||| |||| |||||||||| |  || ||||||||| | |||||||||| |||||| || |||||    
T  42990692 tagccgttaagttgttgacttggatcaaaacgctgccttttaaaagttatagggtgtcaaaatgttacgtttaatcgtcacagatgatcat 42990782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 84 - 161
Target Start/End: Complemental strand, 33235618 - 33235541
Alignment:
Q  84 aattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    |||| |||||||||||||||||||||||   ||||||||||||||||||||||||  ||||| | |||| ||||||||    
T  33235618 aatttggtccttttagtttgacaaaattatcaagttagtcctttaagtttcaaaaacttcaaataggtcattttagtt 33235541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 145
Target Start/End: Original strand, 4187521 - 4187625
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    |||||||||||| ||| ||| || ||| ||||   | ||| |||||||||| ||||| |||||||| |||| | |||||||| |||||||||||||||||    
T  4187521 ttgacagaattcataaattaatcctttaagtttagaaagtttcaattaggtactttttgtttgacataattcccaagttagttctttaagtttcaaaagt 4187620  T
Q  141 ttcaa 145  Q
    |||||    
T  4187621 ttcaa 4187625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 327
Target Start/End: Complemental strand, 8040093 - 8040009
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaat 327  Q
    |||||||||||||||||||||  || |||| |||| ||||||||||||||||  |||||||| | || |||||||||||| ||||    
T  8040093 tagccgttaagttgttgactttgattaaaacgctgccttttaaaagctccaggatgtcaaaatgttatgtttaatggtcataaat 8040009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 232
Target Start/End: Original strand, 10619851 - 10619955
Alignment:
Q  137 aagtttcaatttggtccttttagtttgacagaattctcaagttaatcattt---------aagtttcaaatagatcattttagttgataaactatttcac 227  Q
    ||||||||||| ||| |||||||||||||| |||| |||||||| || |||         ||||||||||||| || |||||||||||||||||||||||    
T  10619851 aagtttcaattaggttcttttagtttgacacaattgtcaagttagtcctttaagtttcaaaagtttcaaataggtccttttagttgataaactatttcac 10619950  T
Q  228 cgtta 232  Q
    |||||    
T  10619951 cgtta 10619955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 21433408 - 21433348
Alignment:
Q  137 aagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    |||||||||||  ||| ||||||||||||||||||| |||||||||| |||||||||||||    
T  21433408 aagtttcaattacgtcattttagtttgacagaattcccaagttaatcctttaagtttcaaa 21433348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 161
Target Start/End: Complemental strand, 5805662 - 5805583
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    ||||||| ||||||||||||||||  |||||  |||||| || ||||||||||||||||||||| | |||| ||||||||    
T  5805662 tcaattatgtccttttagtttgactgaattttcaagttaatcttttaagtttcaaaagtttcaaataggtcattttagtt 5805583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 197
Target Start/End: Original strand, 27995061 - 27995112
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    ||||||||||||||||||||||||||||||||||| |  |||||||||||||    
T  27995061 tttggtccttttagtttgacagaattctcaagttagtgttttaagtttcaaa 27995112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 133
Target Start/End: Complemental strand, 28257005 - 28256954
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagttt 133  Q
    ||||||||||| |||||||||||||||||||  |||||||||||||||||||    
T  28257005 tcaattaggtcattttagtttgacaaaattttcaagttagtcctttaagttt 28256954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 145
Target Start/End: Original strand, 33235090 - 33235153
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    |||||||||||||||| |||||||| |||| | ||||||| ||||||| |||||||||||||||    
T  33235090 tcaattaggtccttttggtttgacagaattcccaagttagacctttaaatttcaaaagtttcaa 33235153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 146 - 193
Target Start/End: Original strand, 36566278 - 36566325
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagttt 193  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||    
T  36566278 tttggtccttttagtttgacagaattcttaagttagtcatttaagttt 36566325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 1349261 - 1349138
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagtta---gtcctttaagtttcaaa 137  Q
    |||||| |||| |||| |||||||||| |||| ||| ||| | || ||  || ||||||||||||| |||||| || |||   |||||||||||||||||    
T  1349261 ttgacataatttctaagttagtcttttaagtttcaaaagttttaaataaatcattttagtttgacagaatttccaacttataagtcctttaagtttcaaa 1349162  T
Q  138 agtttcaatttggtccttttagtt 161  Q
    |||||||| | |||| ||||||||    
T  1349161 agtttcaaataggtcattttagtt 1349138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 27995593 - 27995548
Alignment:
Q  188 aagtttcaaatagatcattttagttgataaactatttcaccgttac 233  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||    
T  27995593 aagttttaaatagatccttttagttgataaactatttcaccgttac 27995548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #99
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 158
Target Start/End: Complemental strand, 39959303 - 39959186
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    |||||||||||  ||| |||||| ||| | ||  || ||| |||| ||| | |||||||||||||| |||||| |||||| || ||||||||||||||||    
T  39959303 ttgacagaatttttaaattagtcatttaaatttgaaaagtttcaaatagattcttttagtttgacagaatttccaagttaatcatttaagtttcaaaagt 39959204  T
Q  141 ttcaatttggtcctttta 158  Q
    ||||| | ||| ||||||    
T  39959203 ttcaaataggttctttta 39959186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #100
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 41020190 - 41020137
Alignment:
Q  84 aattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaa 137  Q
    |||||| |||||||||||||||| ||||||||||||| | ||||||||||||||    
T  41020190 aattagatccttttagtttgacagaatttctaagttaattctttaagtttcaaa 41020137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #101
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 282 - 338
Target Start/End: Complemental strand, 10620144 - 10620088
Alignment:
Q  282 ttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    ||||||| | ||| |||||||||||||||||||||||||||||||| ||||| ||||    
T  10620144 ttaaaagtttcagggtgtcaaaacgctacgtttaatggtcacaaatgatcatttata 10620088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #102
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 27995641 - 27995569
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    |||| ||||||| ||||| | ||| ||||||||||||||||||||||||||||| || | | |||||||||||    
T  27995641 ggtctttttagtatgacatattttttaagttagtcctttaagtttcaaaagttttaaatagatccttttagtt 27995569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #103
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 90 - 138
Target Start/End: Complemental strand, 31893485 - 31893437
Alignment:
Q  90 gtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaa 138  Q
    ||||||||||||||||||||||   ||||||||||||||||||||||||    
T  31893485 gtccttttagtttgacaaaattctcaagttagtcctttaagtttcaaaa 31893437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #104
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 33879640 - 33879592
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    ||||||||||||||||||||||||||| ||||||| || ||||||||||    
T  33879640 tttggtccttttagtttgacagaattcacaagttagtcctttaagtttc 33879592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #105
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 246 - 338
Target Start/End: Original strand, 39958873 - 39958964
Alignment:
Q  246 ccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    ||||||||||||||||||  ||||||||  || ||||||| |||||| | ||||||||  | |||||||||||||||||||| ||||| ||||    
T  39958873 ccgttaagttgttgactttgatcaaaatattgccttttaagagctcc-gtgtgtcaaagtgttacgtttaatggtcacaaatgatcatttata 39958964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #106
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 10620294 - 10620239
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaa 137  Q
    ||||||||| ||||||||||| ||| |||||| |||| ||||||||||||||||||    
T  10620294 tcaattaggcccttttagtttaacagaatttccaagtaagtcctttaagtttcaaa 10620239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #107
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 193
Target Start/End: Original strand, 20101831 - 20101928
Alignment:
Q  94 ttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagttt 193  Q
    ||||||||||||  |||| | ||||||||  |||||||||| |||||||||||| | ||||||||||| ||||| ||| |||||||| || |||||||||    
T  20101831 ttttagtttgactgaattcccaagttagtt-tttaagtttcgaaagtttcaattagatccttttagttcgacag-attttcaagttagtcctttaagttt 20101928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #108
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 266 - 333
Target Start/End: Complemental strand, 20184192 - 20184125
Alignment:
Q  266 atcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    ||||||| ||||||||||||||||| ||  ||||||||||| ||| |||||||||| ||||| |||||    
T  20184192 atcaaaacgctgtcttttaaaagcttcaaggtgtcaaaacgttacatttaatggtcgcaaatgatcat 20184125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #109
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 279 - 338
Target Start/End: Complemental strand, 28256843 - 28256784
Alignment:
Q  279 cttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    ||||||||||||| || |||||||||  ||||||||||||||||||||| ||||| ||||    
T  28256843 cttttaaaagctctagggtgtcaaaattctacgtttaatggtcacaaatgatcatttata 28256784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #110
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 94 - 145
Target Start/End: Original strand, 36566406 - 36566457
Alignment:
Q  94 ttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    ||||||||||||||||||   ||||||||||||||| |||||||||||||||    
T  36566406 ttttagtttgacaaaattctcaagttagtcctttaaatttcaaaagtttcaa 36566457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #111
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 1441011 - 1441065
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    |||||||||||||||| |||| | ||||||||  |||||||||||||||||||||    
T  1441011 tccttttagtttgacagaattcccaagttagtattttaagtttcaaaagtttcaa 1441065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #112
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 305
Target Start/End: Complemental strand, 20366469 - 20366407
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaac 305  Q
    ||||| |||||||||||||||| |||||||   ||||| ||||||||||||| ||||||||||    
T  20366469 tagccattaagttgttgacttggatcaaaacaatgtctgttaaaagctccagggtgtcaaaac 20366407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #113
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 161
Target Start/End: Complemental strand, 4187756 - 4187679
Alignment:
Q  84 aattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    |||||| |||||||| ||||||| |||||  ||||||||||||||| ||| |||||||| || | |||| ||||||||    
T  4187756 aattagatccttttaatttgacagaattttcaagttagtcctttaaattttaaaagttttaaataggtcattttagtt 4187679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #114
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 142
Target Start/End: Original strand, 20101838 - 20101937
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    ||||| ||||||| || ||||| |||| |||| | | ||| |||||||| ||||||||||| |||| | |||| ||||||||||||||||||| ||||||    
T  20101838 ttgactgaattcccaagttagt-ttttaagtttcgaaagtttcaattagatccttttagttcgacagattttc-aagttagtcctttaagttttaaaagt 20101935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #115
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 305
Target Start/End: Complemental strand, 29591028 - 29590971
Alignment:
Q  248 gttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaac 305  Q
    ||||||||||||||||| ||||||||| ||  |||||||||||||||  |||||||||    
T  29591028 gttaagttgttgacttgaatcaaaatgatgctttttaaaagctccaggatgtcaaaac 29590971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #116
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 1441005 - 1441057
Alignment:
Q  145 atttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    ||||| |||||||||||||||||||||| ||||||| |  |||||||||||||    
T  1441005 atttgatccttttagtttgacagaattcccaagttagtattttaagtttcaaa 1441057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #117
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 137
Target Start/End: Complemental strand, 1441542 - 1441446
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaa 137  Q
    |||||| |||||| || |||||| |||  ||| | | ||| ||||||||||| ||||||||||| | |||| | ||||||||| |||||||||||||    
T  1441542 ttgacataattcccaagttagtcctttaggtttcgaaagtttcaattaggtcattttagtttgatagaattcccaagttagtcttttaagtttcaaa 1441446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #118
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 228
Target Start/End: Complemental strand, 4187703 - 4187663
Alignment:
Q  188 aagtttcaaatagatcattttagttgataaactatttcacc 228  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  4187703 aagttttaaataggtcattttagttgataaactatttcacc 4187663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #119
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 93 - 197
Target Start/End: Complemental strand, 6220492 - 6220389
Alignment:
Q  93 cttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtt 192  Q
    |||||||||||| | |||||  |||||| | ||||||  ||  |||||||||||  ||| |||||||||| | ||||||||||||||| || ||||||||    
T  6220492 cttttagtttgatataattttcaagttaattctttaaaattataaagtttcaataaggtacttttagtttcatagaattctcaagttagtc-tttaagtt 6220394  T
Q  193 tcaaa 197  Q
    |||||    
T  6220393 tcaaa 6220389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #120
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 20366049 - 20366096
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    ||||||||||||||||| ||||||||||||||||| || ||||||||||    
T  20366049 tttggtccttttagttt-acagaattctcaagttagtcctttaagtttc 20366096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #121
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 142
Target Start/End: Complemental strand, 23679598 - 23679539
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagttt 142  Q
    |||||||||| |||||||||||||| ||||   |||||||| |||||||||||||||||||    
T  23679598 tcaattaggttcttttagtttgacagaattctcaagttagt-ctttaagtttcaaaagttt 23679539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #122
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 31893250 - 31893298
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    |||||| |||||||||||||||||||||||||||| |  ||||||||||    
T  31893250 tttggttcttttagtttgacagaattctcaagttagttttttaagtttc 31893298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #123
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 34951586 - 34951538
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    ||||||| |||||||||||||||||| |||||||| || ||||||||||    
T  34951586 tttggtctttttagtttgacagaattatcaagttagtcctttaagtttc 34951538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #124
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 243 - 327
Target Start/End: Complemental strand, 35215256 - 35215172
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaat 327  Q
    |||||||||||||||| || || ||||||  | || |||||||||||| ||  ||||||||| | |||||||||| |||||||||    
T  35215256 tagccgttaagttgttaacatggatcaaagcgttgccttttaaaagcttcaaggtgtcaaaatgttacgtttaatcgtcacaaat 35215172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #125
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 36566574 - 36566526
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaa 137  Q
    ||||| |||||||||||| |||||| ||||||||| |||||||||||||    
T  36566574 ggtccctttagtttgacagaatttccaagttagtcttttaagtttcaaa 36566526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #126
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 193
Target Start/End: Complemental strand, 5559741 - 5559694
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagttt 193  Q
    ||||||||||||||||||||| ||||| ||||||| || |||||||||    
T  5559741 tttggtccttttagtttgacaaaattcccaagttagtcctttaagttt 5559694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #127
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 189
Target Start/End: Original strand, 23150639 - 23150682
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaa 189  Q
    ||||||||||||||||||||| ||||||||||||| || |||||    
T  23150639 tttggtccttttagtttgacataattctcaagttagtcctttaa 23150682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #128
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 197
Target Start/End: Original strand, 28104297 - 28104348
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    |||||||||||||||||| || ||||| |||| || ||||||||||||||||    
T  28104297 tttggtccttttagtttggcataattcacaaggtagtcatttaagtttcaaa 28104348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #129
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 125 - 192
Target Start/End: Original strand, 33879350 - 33879417
Alignment:
Q  125 tttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtt 192  Q
    |||||||||  ||||||| |||| | |||||||| |||||||||||| |||||||| |||||| ||||    
T  33879350 tttaagttttgaaagttttaattagatccttttattttgacagaattatcaagttagtcattttagtt 33879417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #130
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 82 - 145
Target Start/End: Complemental strand, 35215392 - 35215329
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    ||||||| ||| ||||| ||||||| |||||| || |||||| ||||||||| |||||||||||    
T  35215392 tcaattaagtcattttaatttgacagaatttccaaattagtcttttaagttttaaaagtttcaa 35215329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #131
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 193
Target Start/End: Original strand, 40904691 - 40904738
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagttt 193  Q
    |||||||||||| |||||||| ||||||||||||| || |||||||||    
T  40904691 tttggtccttttggtttgacataattctcaagttagtcttttaagttt 40904738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #132
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 171
Target Start/End: Complemental strand, 21413230 - 21413148
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaatt 171  Q
    ||||||||||||| |||| |||| | || |||||  ||| |||||| ||| |||||||| || ||||||| ||||||||||||    
T  21413230 ggtccttttagttcgacagaattcccaaattagttattttagtttcgaaaatttcaattaggcccttttaatttgacagaatt 21413148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #133
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 234
Target Start/End: Complemental strand, 28104691 - 28104633
Alignment:
Q  176 agttaatcatttaagtttcaaatagatcattttagttgataaactatttcaccgttacc 234  Q
    ||||| || ||||||||| |||||  |||||| |||||||||| |||||||||||||||    
T  28104691 agttattcctttaagttttaaataagtcatttcagttgataaattatttcaccgttacc 28104633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #134
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 326
Target Start/End: Complemental strand, 31175885 - 31175804
Alignment:
Q  244 agccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaa 326  Q
    ||||||||||||||||||||| || ||||||||   |||||||||||| ||  |||||||||  || |||| |||||||||||    
T  31175885 agccgttaagttgttgacttggatgaaaatgcttcattttaaaagctcgaggatgtcaaaaccttatgttt-atggtcacaaa 31175804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #135
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 146 - 191
Target Start/End: Original strand, 39958687 - 39958732
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagt 191  Q
    ||||||||||||||||||||| |||| | |||||| ||||||||||    
T  39958687 tttggtccttttagtttgacataatttttaagttagtcatttaagt 39958732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #136
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 1346480 - 1346528
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    |||| ||||||||||||||||||||||| |||||| |  ||||||||||    
T  1346480 tttgatccttttagtttgacagaattcttaagttagtgctttaagtttc 1346528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #137
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 247 - 327
Target Start/End: Original strand, 1441153 - 1441233
Alignment:
Q  247 cgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaat 327  Q
    |||||| ||||| ||||| ||||||| ||||  ||||||||| ||    ||||||||||| || |||||||||||||||||    
T  1441153 cgttaaattgttaacttggatcaaaacgctgcattttaaaagttctgcggtgtcaaaacgttatgtttaatggtcacaaat 1441233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #138
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 1441557 - 1441509
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    ||||||||||||||||||||| ||||| ||||||| || |||| |||||    
T  1441557 tttggtccttttagtttgacataattcccaagttagtcctttaggtttc 1441509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #139
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 197
Target Start/End: Original strand, 5559107 - 5559159
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaat-catttaagtttcaaa 197  Q
    ||||||||||||| ||||||||||||| ||||||| | | |||||||||||||    
T  5559107 tttggtccttttaatttgacagaattcccaagttagtccttttaagtttcaaa 5559159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #140
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 304
Target Start/End: Original strand, 10619997 - 10620052
Alignment:
Q  248 gttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaa 304  Q
    ||||||||||||||||| ||||||||| || ||||||||| ||||||  ||||||||    
T  10619997 gttaagttgttgacttggatcaaaatgttg-cttttaaaaactccaggctgtcaaaa 10620052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #141
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 20183883 - 20183927
Alignment:
Q  191 tttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    |||||||||  ||||||||||||||||| |||||||| |||||||    
T  20183883 tttcaaataagtcattttagttgataaattatttcactgttaccc 20183927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #142
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 197
Target Start/End: Complemental strand, 20366663 - 20366611
Alignment:
Q  145 atttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    |||||||||||||||||  ||||||||  ||||||| || |||||||||||||    
T  20366663 atttggtccttttagttaaacagaatttccaagttagtcctttaagtttcaaa 20366611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #143
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 21433144 - 21433192
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    |||| |||||||||||||||| ||||| ||||||| || ||||||||||    
T  21433144 tttgatccttttagtttgacaaaattcacaagttagtcctttaagtttc 21433192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #144
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 28256492 - 28256544
Alignment:
Q  145 atttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    ||||| |||||||||||||||||||||| ||||||| |  ||||| |||||||    
T  28256492 atttgatccttttagtttgacagaattcccaagttacttctttaaatttcaaa 28256544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #145
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 230
Target Start/End: Original strand, 33879407 - 33879435
Alignment:
Q  202 tcattttagttgataaactatttcaccgt 230  Q
    |||||||||||||||||||||||||||||    
T  33879407 tcattttagttgataaactatttcaccgt 33879435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 87; Significance: 1e-41; HSPs: 69)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 10685851 - 10685997
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||||||| |||||  |||||||||||||||||||| || |||||||||  ||| ||||||||||||||||||  ||||||| || ||||    
T  10685851 ggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaacgtttcaattacgtctttttagtttgacagaatttccaagttagtccttta 10685950  T
Q  189 agtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    |||||||||||  ||||||||||||||||||||||| ||||||||||    
T  10685951 agtttcaaatatgtcattttagttgataaactattttaccgttaccc 10685997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 114 - 327
Target Start/End: Complemental strand, 49651097 - 49650865
Alignment:
Q  114 taagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaatagatcattttagttg 213  Q
    ||||||||||||| ||||||| ||||||| || | | || ||||||||||||||||||||||||||| || |||||||||||||||| ||  ||||||||    
T  49651097 taagttagtccttcaagtttcgaaagttttaaatagatcattttagtttgacagaattctcaagttagtcctttaagtttcaaataggtccctttagttg 49650998  T
Q  214 ataaactatttcaccgttaccc-------------------gttggtatagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccag 294  Q
    |||||||||||||| |||||||                   |||| | ||| |||||||||||||||||| ||||||| |||| ||||||||| ||||||    
T  49650997 ataaactatttcactgttacccctgctaataattaattgatgttgatgtagtcgttaagttgttgacttggatcaaaacgctgccttttaaaatctccag 49650898  T
Q  295 agtgtcaaaacgctacgtttaatggtcacaaat 327  Q
     ||||||||| ||||||||||||||||||||||    
T  49650897 ggtgtcaaaatgctacgtttaatggtcacaaat 49650865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 10686835 - 10686680
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||||||| |||||  |||||||||||||||||||| ||||||| | || |||||||||| ||  ||||||||||||||||| |||||||    
T  10686835 ggtccttttagtttgacagaattttcaagttagtcctttaagtttcgaaagtttaagttaggtccttttacttcaacagaattctcaagttagtcattta 10686736  T
Q  189 a---------gtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    |         ||||||||||| ||||||||||||||||||||||||||||||||||    
T  10686735 agttttaaaagtttcaaataggtcattttagttgataaactatttcaccgttaccc 10686680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 91 - 227
Target Start/End: Original strand, 49650578 - 49650715
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaat-catttaa 189  Q
    |||||||||||||||| ||||   ||||||||||||||| |||  ||| |||||||| |||||||||||||||||||||||||||||||| | | |||||    
T  49650578 tccttttagtttgacataattctcaagttagtcctttaaattttgaaaatttcaattaggtccttttagtttgacagaattctcaagttagtccttttaa 49650677  T
Q  190 gtttcaaatagatcattttagttgataaactatttcac 227  Q
    ||||||||||| |  ||||||||||||||| |||||||    
T  49650678 gtttcaaataggttcttttagttgataaaccatttcac 49650715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 27351054 - 27351209
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||| ||||| ||||||| ||||   |||||||||||||||||||| ||||||||||||  ||||||||||||||||| ||||||||||||| || ||||    
T  27351054 ggtctttttactttgacagaattcgcaagttagtcctttaagtttcgaaagtttcaattaagtccttttagtttgacataattctcaagttagtccttta 27351153  T
Q  189 agtt---------tcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    ||||         |||||||  ||||||||||||||||||||||||||||||||||    
T  27351154 agtttcaaaagtatcaaataagtcattttagttgataaactatttcaccgttaccc 27351209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 242 - 327
Target Start/End: Complemental strand, 34254947 - 34254863
Alignment:
Q  242 atagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaat 327  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  34254947 atagccgttaagttgttgacttgtatcaaaacgctgtcttttaaaagcttcag-gtgtcaaaacgttacgtttaatggtcacaaat 34254863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 29419170 - 29419062
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||||||| |||||| ||||||||| || ||||||| |||||||||||| ||||||||||||||||||||||||  || ||| || ||||    
T  29419170 ggtccttttagtttgacataatttccaagttagtctttcaagtttcgaaagtttcaattaggtccttttagtttgacagaattccaaaattagtctttta 29419071  T
Q  189 agtttcaaa 197  Q
    |||||||||    
T  29419070 agtttcaaa 29419062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 89 - 191
Target Start/End: Original strand, 11897845 - 11897947
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||| ||||||||||||| ||||   ||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||| ||||    
T  11897845 ggtcattttagtttgacagaattctcaagttagtcatttaagtttcgaaagtttcaattaggtccttttagtttgacagaattcccaagttaatccttta 11897944  T
Q  189 agt 191  Q
    |||    
T  11897945 agt 11897947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 44964142 - 44964035
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaa 181  Q
    |||||||| || ||||||||||||| ||||   |||||| |||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||     
T  44964142 tcaattagatcattttagtttgacagaattctcaagttattcctttaagttttaaaagtttcaaataggtccttttagtttgacagaattctcaagttag 44964043  T
Q  182 tcatttaa 189  Q
    || |||||    
T  44964042 tcctttaa 44964035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 48352863 - 48352708
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||||||| |||| |  |||||||| |||||||||| |||| ||||||| ||||  |||||||||||| ||||| ||||||| || ||||    
T  48352863 ggtccttttagtttgacagaattcccgagttagtcttttaagtttcgaaagattcaattaggtctatttagtttgacataattcccaagttagtccttta 48352764  T
Q  189 agtttc---------aaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    ||||||         |||||| |||||||||||||||||||||||||| |||||||    
T  48352763 agtttcaaaagttttaaataggtcattttagttgataaactatttcactgttaccc 48352708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 125 - 235
Target Start/End: Complemental strand, 4772722 - 4772612
Alignment:
Q  125 tttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaatagatcattttagttgataaactattt 224  Q
    |||||||||  ||| ||| |||| |||||||||||||||||||||||  ||||||| || ||||||||||||||| ||  ||||||||||||||||||||    
T  4772722 tttaagttttgaaatttttaattgggtccttttagtttgacagaatttccaagttagtcctttaagtttcaaataaattcttttagttgataaactattt 4772623  T
Q  225 caccgttaccc 235  Q
    || ||||||||    
T  4772622 catcgttaccc 4772612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 82 - 197
Target Start/End: Complemental strand, 17898916 - 17898801
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaa 181  Q
    ||||||||||||||||||||||| | ||||   || |||||||||||||||||||||||||||| |  ||| |||||||||||||||||| |||| |||     
T  17898916 tcaattaggtccttttagtttgatagaattcacaaattagtcctttaagtttcaaaagtttcaaataagtcattttagtttgacagaattatcaaattag 17898817  T
Q  182 tcatttaagtttcaaa 197  Q
    || ||||| |||||||    
T  17898816 tcctttaaatttcaaa 17898801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 251 - 333
Target Start/End: Complemental strand, 10686638 - 10686556
Alignment:
Q  251 aagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    |||||||| ||||| ||||||||| |||||||||||||||| || |||||||||| ||||||||||||||||||||| |||||    
T  10686638 aagttgtttacttggatcaaaatgttgtcttttaaaagctcgagggtgtcaaaacactacgtttaatggtcacaaatgatcat 10686556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 243 - 333
Target Start/End: Complemental strand, 29418977 - 29418887
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    |||||||||||||||||||||| |||||||| ||||||||||||| |||||| ||||||| ||| ||||||||||  |||||||| |||||    
T  29418977 tagccgttaagttgttgacttggatcaaaatactgtcttttaaaaactccagggtgtcaacacgttacgtttaatcatcacaaataatcat 29418887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 236 - 338
Target Start/End: Original strand, 37663231 - 37663333
Alignment:
Q  236 gttggtatagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatct 335  Q
    |||||| |||||| |||||||||| |||| ||||||||| |||||||||||||||| |  ||| ||||| |||||||||||||||||||||| ||||| |    
T  37663231 gttggtgtagccgataagttgttgtcttggatcaaaatgttgtcttttaaaagctcgaaggtgacaaaatgctacgtttaatggtcacaaatgatcattt 37663330  T
Q  336 ata 338  Q
    |||    
T  37663331 ata 37663333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 91 - 193
Target Start/End: Complemental strand, 44964192 - 44964091
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaag 190  Q
    ||||||||||| |||||||||   ||||||||| |||||||||| |||||||||||| | || ||||||||||||||||||||||||||| || ||||||    
T  44964192 tccttttagttagacaaaattctcaagttagtc-tttaagtttcgaaagtttcaattagatcattttagtttgacagaattctcaagttattcctttaag 44964094  T
Q  191 ttt 193  Q
    |||    
T  44964093 ttt 44964091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 41 - 197
Target Start/End: Complemental strand, 1766037 - 1765881
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgaca-aaatttctaagttagtcctttaagtttcaaaag 139  Q
    ||||||||||||  || |||||||||| | || ||| ||| | ||||| ||| ||||||||||||| |||| || | |||||||||||||| ||||||||    
T  1766037 ttgacagaattctcaagttagtcttttaaatttcaaaagtttaaattatgtcattttagtttgacagaaatctc-atgttagtcctttaagcttcaaaag 1765939  T
Q  140 tttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    |||||| |  ||| ||||||||||||||||||  ||||||| || |||||||||||||    
T  1765938 tttcaaataagtcattttagtttgacagaatttccaagttactcctttaagtttcaaa 1765881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 93 - 172
Target Start/End: Original strand, 4030310 - 4030390
Alignment:
Q  93 cttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtcc-ttttagtttgacagaattc 172  Q
    |||||||||||||||||||  ||||||| ||||||||||||| |||||||||||| ||||| |||||||||||||||||||    
T  4030310 cttttagtttgacaaaattcttaagttaatcctttaagtttcgaaagtttcaattaggtcctttttagtttgacagaattc 4030390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 243 - 325
Target Start/End: Original strand, 8902953 - 8903035
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaa 325  Q
    |||||||||||||||||||||| ||||||| | || |||||||||||||||  ||||||||||| |||||||||| |||||||    
T  8902953 tagccgttaagttgttgacttggatcaaaacgatgccttttaaaagctccaccgtgtcaaaacgttacgtttaatcgtcacaa 8903035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 243 - 333
Target Start/End: Original strand, 10686388 - 10686478
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    |||||||||||||||||||||||||||||||  || |||||||||||||  | ||||||||||  |||||||||| ||||||||| |||||    
T  10686388 tagccgttaagttgttgacttgtatcaaaatattgccttttaaaagctctggggtgtcaaaacattacgtttaatcgtcacaaatgatcat 10686478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 89 - 227
Target Start/End: Complemental strand, 27351656 - 27351518
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||| ||||||| ||||   |||||  | ||||||||||| ||||||| ||||  ||| ||||| ||||| ||||||||||| ||| || ||||    
T  27351656 ggtccttttaatttgacataattctcaagttgatactttaagtttcgaaagttttaattatgtcgttttattttgatagaattctcaaattagtccttta 27351557  T
Q  189 agtttcaaatagatcattttagttgataaactatttcac 227  Q
    |||||||||||| |  ||||| |||||||||||||||||    
T  27351556 agtttcaaataggtgcttttacttgataaactatttcac 27351518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 243 - 325
Target Start/End: Original strand, 49650757 - 49650839
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaa 325  Q
    |||||||||||||||||| ||| ||||||||| ||||||||||||| | ||| ||||||||||| ||||||||||| ||||||    
T  49650757 tagccgttaagttgttgatttggatcaaaatgttgtcttttaaaagtttcagggtgtcaaaacgatacgtttaatgatcacaa 49650839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 17898969 - 17898861
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    ||||||||||||||||||  |||   || ||||| |||||||||| |||| |||||||| |||||||||||||||| ||||||| ||| ||| || ||||    
T  17898969 ggtccttttagtttgacatgattctcaaattagttctttaagttttaaaaatttcaattaggtccttttagtttgatagaattcacaaattagtccttta 17898870  T
Q  189 agtttcaaa 197  Q
    |||||||||    
T  17898869 agtttcaaa 17898861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 250 - 326
Target Start/End: Original strand, 34254697 - 34254773
Alignment:
Q  250 taagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaa 326  Q
    ||||||||||||||| |||||||||||| |||||||||||| ||  |||| ||||||||| ||||||||||||||||    
T  34254697 taagttgttgacttggatcaaaatgctgccttttaaaagcttcatggtgttaaaacgctatgtttaatggtcacaaa 34254773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 48352851 - 48352731
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    |||||||||||||  | |||||||||| |||| | | ||  |||||||||||  |||||||||||| |||| | ||||||||||||||||||||||||||    
T  48352851 ttgacagaattcccgagttagtcttttaagtttcgaaagattcaattaggtctatttagtttgacataattcccaagttagtcctttaagtttcaaaagt 48352752  T
Q  141 ttcaatttggtccttttagtt 161  Q
    || || | |||| ||||||||    
T  48352751 tttaaataggtcattttagtt 48352731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 154 - 233
Target Start/End: Complemental strand, 4030800 - 4030721
Alignment:
Q  154 ttttagtttgacagaattctcaagttaatcatttaagtttcaaatagatcattttagttgataaactatttcaccgttac 233  Q
    ||||||||| |||||||| ||||| |||||  ||||||||||||||| |||||||||||| |||||||||||||| ||||    
T  4030800 ttttagtttcacagaattttcaagctaatcccttaagtttcaaataggtcattttagttggtaaactatttcacctttac 4030721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 161
Target Start/End: Original strand, 8902817 - 8902896
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    ||||||| ||| |||||||||||||||||| | |||||||||||||||||||||||||||| || |  ||||||||||||    
T  8902817 tcaattaagtcattttagtttgacaaaattcccaagttagtcctttaagtttcaaaagttttaaataagtccttttagtt 8902896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 243 - 338
Target Start/End: Complemental strand, 27351476 - 27351381
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    |||||||||||||||||||||  ||||||||| ||| |||||||||||| || ||||| ||| ||||  |||||||||||||||| ||||| ||||    
T  27351476 tagccgttaagttgttgactttgatcaaaatgttgttttttaaaagctctagggtgtcgaaatgctaattttaatggtcacaaatgatcatttata 27351381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 241 - 327
Target Start/End: Complemental strand, 4030687 - 4030601
Alignment:
Q  241 tatagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaat 327  Q
    ||||| ||||||||| |||||||  |||||||| |||| |||||||||||  || ||||||||||||| ||||||||||||||||||    
T  4030687 tataggcgttaagtttttgactttaatcaaaatactgtattttaaaagcttgagggtgtcaaaacgctgcgtttaatggtcacaaat 4030601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 34254504 - 34254610
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaag 190  Q
    |||||||||||||||| ||||   ||||| |||||||||| ||||||||||| || | | ||||||||||||||||||||||  |||| | || ||||||    
T  34254504 tccttttagtttgacagaattctcaagttggtcctttaaggttcaaaagttttaaatagatccttttagtttgacagaattcctaagtcagtcctttaag 34254603  T
Q  191 tttcaaa 197  Q
    |||||||    
T  34254604 tttcaaa 34254610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 266 - 327
Target Start/End: Original strand, 39302480 - 39302541
Alignment:
Q  266 atcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaat 327  Q
    ||||||||| || |||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  39302480 atcaaaatgttgccttttaaaagcttcagggtgtcaaaacgctacgtttaatggtcacaaat 39302541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 145
Target Start/End: Original strand, 27351066 - 27351170
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    ||||||||||||  || |||||| ||| |||| | | ||| ||||||| ||||||||||||||||| ||||   ||||||||||||||||||||||||||    
T  27351066 ttgacagaattcgcaagttagtcctttaagtttcgaaagtttcaattaagtccttttagtttgacataattctcaagttagtcctttaagtttcaaaagt 27351165  T
Q  141 ttcaa 145  Q
     ||||    
T  27351166 atcaa 27351170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 236 - 327
Target Start/End: Original strand, 27351236 - 27351330
Alignment:
Q  236 gttggtatagccgttaagtt---gttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaat 327  Q
    |||| |||||||||||||||   ||||||||| ||||||||| || |||||||||| | ||| ||||||||||| |||||||||| |||||||||    
T  27351236 gttgatatagccgttaagtttttgttgacttgaatcaaaatgttgccttttaaaagatacagggtgtcaaaacgttacgtttaatcgtcacaaat 27351330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 145
Target Start/End: Complemental strand, 29419158 - 29419054
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    |||||| |||| | || |||||||||  |||| | | ||| ||||||||||||||||||||||||| |||| | || |||||| ||||||||||||||||    
T  29419158 ttgacataatttccaagttagtctttcaagtttcgaaagtttcaattaggtccttttagtttgacagaattccaaaattagtcttttaagtttcaaaagt 29419059  T
Q  141 ttcaa 145  Q
    |||||    
T  29419058 ttcaa 29419054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 89 - 232
Target Start/End: Complemental strand, 39302809 - 39302663
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattt- 187  Q
    |||||||||||||||||| ||||   ||||||||||||||| ||| ||||||||||| |   || ||||||||| ||| |||| |||||||| || |||     
T  39302809 ggtccttttagtttgacagaattctcaagttagtcctttaaattttaaaagtttcaactatatcgttttagtttaacaaaattttcaagttactcctttc 39302710  T
Q  188 --aagtttcaaatagatcattttagttgataaactatttcaccgtta 232  Q
      | ||||||||||| |  |||||||||||||| |||||||| ||||    
T  39302709 aaatgtttcaaatagcttcttttagttgataaattatttcactgtta 39302663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 338
Target Start/End: Complemental strand, 8903210 - 8903116
Alignment:
Q  244 agccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    ||||||||| ||||| ||||| ||||||||| || |||||||||| || || |||| ||||||||| |||||||||||| |||| ||||| ||||    
T  8903210 agccgttaaattgttaacttggatcaaaatggtgccttttaaaagttcgagggtgtaaaaacgctaagtttaatggtcataaatgatcatttata 8903116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 34254564 - 34254618
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    |||||||||||||||| |||| |||||| ||||||||||||||||||||||||||    
T  34254564 tccttttagtttgacagaattcctaagtcagtcctttaagtttcaaaagtttcaa 34254618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 96 - 161
Target Start/End: Original strand, 1765763 - 1765828
Alignment:
Q  96 ttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||| || | | |||||||||||    
T  1765763 ttagtttgacataatttctaaattagtcctttaagtttcaaaagttttaaatagatccttttagtt 1765828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 84 - 137
Target Start/End: Complemental strand, 4772703 - 4772650
Alignment:
Q  84 aattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaa 137  Q
    |||| |||||||||||||||||| |||||| |||||||||||||||||||||||    
T  4772703 aattgggtccttttagtttgacagaatttccaagttagtcctttaagtttcaaa 4772650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 120 - 197
Target Start/End: Original strand, 8902795 - 8902872
Alignment:
Q  120 agtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    ||||||| ||||||| ||||||||||||  ||| ||||||||||||| ||||| ||||||| || |||||||||||||    
T  8902795 agtccttgaagtttcgaaagtttcaattaagtcattttagtttgacaaaattcccaagttagtcctttaagtttcaaa 8902872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 249 - 333
Target Start/End: Original strand, 4772291 - 4772374
Alignment:
Q  249 ttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    |||||||||||||||| ||| |||  ||| |||||||||||| | | ||||||||||| |||||||||||||||||||| |||||    
T  4772291 ttaagttgttgacttggatcgaaactctgccttttaaaagcttctg-gtgtcaaaacgttacgtttaatggtcacaaatgatcat 4772374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 11897842 - 11897890
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  11897842 tttggtcattttagtttgacagaattctcaagttagtcatttaagtttc 11897890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 197
Target Start/End: Complemental strand, 1766044 - 1765941
Alignment:
Q  94 ttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagttt 193  Q
    ||||| ||||||| ||||   ||||||||| ||||| |||||||||||| ||||  ||| |||||||||||||||| ||||| |||| || |||||| ||    
T  1766044 ttttaatttgacagaattctcaagttagtcttttaaatttcaaaagtttaaattatgtcattttagtttgacagaaatctcatgttagtcctttaagctt 1765945  T
Q  194 caaa 197  Q
    ||||    
T  1765944 caaa 1765941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 224
Target Start/End: Original strand, 4772174 - 4772249
Alignment:
Q  149 ggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaatagatcattttagttgataaactattt 224  Q
    |||||||||||||||||| ||||| |||| || || |||||||||||||||  |  ||||||||||||||||||||    
T  4772174 ggtccttttagtttgacaaaattcacaaggtagtcctttaagtttcaaataagttcttttagttgataaactattt 4772249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 10685904 - 10685959
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaa 137  Q
    ||||||| ||| ||||||||||||| |||||| |||||||||||||||||||||||    
T  10685904 tcaattacgtctttttagtttgacagaatttccaagttagtcctttaagtttcaaa 10685959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 146 - 235
Target Start/End: Complemental strand, 8903343 - 8903245
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcattt---------aagtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    ||||||| ||||||||||||| |||||||||||||||| |||         |||||||||||| ||||||||||||| |||| |||||||| |||||||    
T  8903343 tttggtctttttagtttgacataattctcaagttaatcctttaagtttcgaaagtttcaaatatatcattttagttgctaaattatttcactgttaccc 8903245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 11897857 - 11897947
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagt 131  Q
    ||||||||||||  || |||||| ||| |||| | | ||| ||||||||||||||||||||||||| |||| | |||||| ||||||||||    
T  11897857 ttgacagaattctcaagttagtcatttaagtttcgaaagtttcaattaggtccttttagtttgacagaattcccaagttaatcctttaagt 11897947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 115 - 197
Target Start/End: Original strand, 44963868 - 44963950
Alignment:
Q  115 aagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    |||| ||||||||||||||| |||||||||||   ||||||||||||||| || |||| ||| ||| || |||||||||||||    
T  44963868 aagtaagtcctttaagtttcgaaagtttcaataaagtccttttagtttgataggattcccaaattagtcctttaagtttcaaa 44963950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 194
Target Start/End: Original strand, 10685847 - 10685896
Alignment:
Q  145 atttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    ||||||||||||||||||||||||||| |||||||| || ||||||||||    
T  10685847 atttggtccttttagtttgacagaattttcaagttagtcctttaagtttc 10685896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 10686838 - 10686790
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    |||||||||||||||||||||||||| |||||||| || ||||||||||    
T  10686838 tttggtccttttagtttgacagaattttcaagttagtcctttaagtttc 10686790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 41 - 145
Target Start/End: Complemental strand, 44964123 - 44964019
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    ||||||||||||  || ||| || ||| ||||  || ||| |||| |||||||||||||||||||| ||||   ||||||||||||||| ||| ||||||    
T  44964123 ttgacagaattctcaagttattcctttaagttttaaaagtttcaaataggtccttttagtttgacagaattctcaagttagtcctttaaattttaaaagt 44964024  T
Q  141 ttcaa 145  Q
    |||||    
T  44964023 ttcaa 44964019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 86 - 137
Target Start/End: Original strand, 4772171 - 4772222
Alignment:
Q  86 ttaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaa 137  Q
    ||||||||||||||||||||||||||   ||| |||||||||||||||||||    
T  4772171 ttaggtccttttagtttgacaaaattcacaaggtagtcctttaagtttcaaa 4772222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 327
Target Start/End: Complemental strand, 39302626 - 39302546
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaat 327  Q
    |||||||||||||||||||||| ||    | | ||||||||||||||| ||| ||||||||| |  |||||||||||||||||||    
T  39302626 tagccgttaagttgttgacttggat----acgttgtcttttaaaagcttcagggtgtcaaaatgtcacgtttaatggtcacaaat 39302546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 189
Target Start/End: Complemental strand, 39302812 - 39302769
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaa 189  Q
    ||||||||||||||||||||||||||||||||||| || |||||    
T  39302812 tttggtccttttagtttgacagaattctcaagttagtcctttaa 39302769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 230
Target Start/End: Original strand, 1765804 - 1765846
Alignment:
Q  188 aagtttcaaatagatcattttagttgataaactatttcaccgt 230  Q
    |||||| ||||||||| ||||||||||||||||||||||||||    
T  1765804 aagttttaaatagatccttttagttgataaactatttcaccgt 1765846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 48352866 - 48352818
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    ||||||||||||||||||||||||||| | ||||| || ||||||||||    
T  48352866 tttggtccttttagtttgacagaattcccgagttagtcttttaagtttc 48352818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 49650629 - 49650685
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcc-tttaagtttcaaa 137  Q
    ||||||||||||||||||||||||| ||||   |||||||||| |||||||||||||    
T  49650629 tcaattaggtccttttagtttgacagaattctcaagttagtccttttaagtttcaaa 49650685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 144
Target Start/End: Complemental strand, 17898897 - 17898794
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    |||| |||||||  || |||||| ||| |||| ||| ||| |||| || ||| ||||||||||||| ||||   || |||||||||||| ||||||||||    
T  17898897 ttgatagaattcacaaattagtcctttaagtttcaaaagtttcaaataagtcattttagtttgacagaattatcaaattagtcctttaaatttcaaaagt 17898798  T
Q  141 ttca 144  Q
    ||||    
T  17898797 ttca 17898794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 197
Target Start/End: Original strand, 34254499 - 34254550
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    |||| |||||||||||||||||||||||||||||  || |||||| ||||||    
T  34254499 tttgttccttttagtttgacagaattctcaagttggtcctttaaggttcaaa 34254550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 48352311 - 48352358
Alignment:
Q  188 aagtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    ||||||||||||| |  ||||||||||||||||||||||||| |||||    
T  48352311 aagtttcaaataggttcttttagttgataaactatttcaccgctaccc 48352358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 229
Target Start/End: Original strand, 2965542 - 2965583
Alignment:
Q  188 aagtttcaaatagatcattttagttgataaactatttcaccg 229  Q
    |||||| |||||  ||||||||||||||||||||||||||||    
T  2965542 aagttttaaatatgtcattttagttgataaactatttcaccg 2965583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 194
Target Start/End: Original strand, 4030310 - 4030351
Alignment:
Q  153 cttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    |||||||||||||| |||||| ||||||||| ||||||||||    
T  4030310 cttttagtttgacaaaattcttaagttaatcctttaagtttc 4030351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 233
Target Start/End: Original strand, 39302338 - 39302427
Alignment:
Q  153 cttttagtttgacagaattctcaagttaatcatttaagtttcaaa---------tagatcattttagttgataaactatttcaccgttac 233  Q
    |||||||||||||||||||| ||| |||||  |||||||||||||         ||| |  |||||||||||||||||||||||||||||    
T  39302338 cttttagtttgacagaattcacaaattaattctttaagtttcaaaagtttcgattaggttcttttagttgataaactatttcaccgttac 39302427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 299 - 339
Target Start/End: Original strand, 2965677 - 2965717
Alignment:
Q  299 tcaaaacgctacgtttaatggtcacaaattatcatctatat 339  Q
    |||||||||| |||||||||||||||||| ||||| |||||    
T  2965677 tcaaaacgctgcgtttaatggtcacaaatgatcatttatat 2965717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 8903340 - 8903284
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    |||| ||||||||||||| ||||   |||||| ||||||||||||| ||||||||||    
T  8903340 ggtctttttagtttgacataattctcaagttaatcctttaagtttcgaaagtttcaa 8903284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 27351051 - 27351099
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    ||||||| ||||| ||||||||||||| ||||||| || ||||||||||    
T  27351051 tttggtctttttactttgacagaattcgcaagttagtcctttaagtttc 27351099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 27351659 - 27351611
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    ||||||||||||| ||||||| |||||||||||| ||  ||||||||||    
T  27351659 tttggtccttttaatttgacataattctcaagttgatactttaagtttc 27351611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 39302338 - 39302406
Alignment:
Q  93 cttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    |||||||||||||| ||||   || ||| | |||||||||||||||||||| ||| ||| |||||||||    
T  39302338 cttttagtttgacagaattcacaaattaattctttaagtttcaaaagtttcgattaggttcttttagtt 39302406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 44963903 - 44963955
Alignment:
Q  90 gtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagttt 142  Q
    ||||||||||||||| |  ||| | || |||||||||||||||||||||||||    
T  44963903 gtccttttagtttgataggattcccaaattagtcctttaagtttcaaaagttt 44963955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 86; Significance: 5e-41; HSPs: 7)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 90 - 235
Target Start/End: Original strand, 9398 - 9543
Alignment:
Q  90 gtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaa 189  Q
    ||||||||||||||||| ||||  |||||||||| ||||||||||  ||||||||||| |||||||||||||| | ||||||||||||||| |  |||||    
T  9398 gtccttttagtttgacagaattcttaagttagtcatttaagtttcggaagtttcaattaggtccttttagtttaatagaattctcaagttagttctttaa 9497  T
Q  190 gtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    ||||||||||| || ||||||||||||||||||||||| |||||||    
T  9498 gtttcaaataggtccttttagttgataaactatttcactgttaccc 9543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 248 - 343
Target Start/End: Original strand, 9582 - 9677
Alignment:
Q  248 gttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctatattgtt 343  Q
    ||||||||||||||||  ||||||||  || ||||||||||||| || |||||||||||||||||||||||||||||||| ||||| |||| ||||    
T  9582 gttaagttgttgactttgatcaaaatattgccttttaaaagctcgagggtgtcaaaacgctacgtttaatggtcacaaatgatcatttatagtgtt 9677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #3
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 254 - 333
Target Start/End: Complemental strand, 9823 - 9744
Alignment:
Q  254 ttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    ||||||||||| ||||||| ||||||||||||||||||||| ||||||||||| ||| |||||| ||||||||| |||||    
T  9823 ttgttgacttggatcaaaacgctgtcttttaaaagctccagggtgtcaaaacgttacatttaatcgtcacaaatgatcat 9744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 9993 - 9903
Alignment:
Q  90 gtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagtta 180  Q
    ||||||||||||||||| ||||   |||||||| ||||||||||| |||||||||||| | |||||||||||||||| ||||| |||||||    
T  9993 gtccttttagtttgacagaattctcaagttagttctttaagtttcgaaagtttcaattagttccttttagtttgacataattcccaagtta 9903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 137
Target Start/End: Original strand, 9409 - 9505
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaa 137  Q
    |||||||||||| ||| |||||| ||| |||| |   ||| ||||||||||||||||||||| | | ||||   |||||||| ||||||||||||||    
T  9409 ttgacagaattcttaagttagtcatttaagtttcggaagtttcaattaggtccttttagtttaatagaattctcaagttagttctttaagtttcaaa 9505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 150 - 194
Target Start/End: Complemental strand, 9993 - 9949
Alignment:
Q  150 gtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    ||||||||||||||||||||||||||||||| |  ||||||||||    
T  9993 gtccttttagtttgacagaattctcaagttagttctttaagtttc 9949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 9982 - 9891
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtt 132  Q
    ||||||||||||  || |||||  ||| |||| | | ||| |||||||| |||||||||||||||| |||| | ||||||||||||| ||||    
T  9982 ttgacagaattctcaagttagttctttaagtttcgaaagtttcaattagttccttttagtttgacataattcccaagttagtccttttagtt 9891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 82; Significance: 1e-38; HSPs: 96)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 13538472 - 13538622
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaat----ca 184  Q
    |||||||||||||||||| |||| |||||||||||||||| ||||| |||||||||||| ||||  |||||||||| |||||| |||||||| |    |     
T  13538472 ggtccttttagtttgacataattcctaagttagtcctttacgtttcgaaagtttcaattaggtctgtttagtttgatagaattttcaagttattagtcct 13538571  T
Q  185 tttaagtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    |||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  13538572 tttaagtttcaaatatgtcattttagttgataaactatttcaccgttaccc 13538622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 93 - 226
Target Start/End: Original strand, 26275511 - 26275644
Alignment:
Q  93 cttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtt 192  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||| | | || |||||||||||| |||||| ||||||| ||||| |||||    
T  26275511 cttttagtttgacagaatttctaagttagttctttaagtttcaaaagtttcaaatagatcattttagtttgacggaattcccaagttagtcattcaagtt 26275610  T
Q  193 tcaaatagatcattttagttgataaactatttca 226  Q
    |||||||| |  |||||||||| |||||||||||    
T  26275611 tcaaataggttcttttagttgacaaactatttca 26275644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 91 - 234
Target Start/End: Original strand, 36417891 - 36418034
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaag 190  Q
    |||||||||||| ||| ||||   ||||||||||||||| |||| |||||||||||| ||| ||||| |||||||| ||||||||||||| || ||||||    
T  36417891 tccttttagtttaacagaattctcaagttagtcctttaaatttcgaaagtttcaattaggttcttttggtttgacataattctcaagttagtcctttaag 36417990  T
Q  191 tttcaaatagatcattttagttgataaactatttcaccgttacc 234  Q
    |||||||||| || |||||||||||||| |||||||| ||||||    
T  36417991 tttcaaataggtccttttagttgataaattatttcactgttacc 36418034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 20728531 - 20728686
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattt- 187  Q
    |||| ||||||||||||| |||||| |||||||||||||||||||| |||| ||||||| |||||||||||||| ||||||||||||||||| || |||     
T  20728531 ggtctttttagtttgacagaatttccaagttagtcctttaagtttcgaaagattcaattaggtccttttagtttaacagaattctcaagttagtccttta 20728630  T
Q  188 --------aagtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
            ||||||||||||  || |||||||||| ||||||||||||||||||||    
T  20728631 agttttaaaagtttcaaatatgtctttttagttgaaaaactatttcaccgttaccc 20728686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 36418521 - 36418366
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||| ||||||||||||| ||||   |||||||||||||| |||||||||||||||||| |||||||||||||||||| |||| |||||||| || ||||    
T  36418521 ggtctttttagtttgacataattctcaagttagtcctttacgtttcaaaagtttcaattaggtccttttagtttgacataattttcaagttagtccttta 36418422  T
Q  189 agttt---------caaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    |||||         ||||||| || |||||||||||||||||||||||||||||||    
T  36418421 agtttcaaaagtttcaaataggtccttttagttgataaactatttcaccgttaccc 36418366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 35190533 - 35190388
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||| ||||||| |||||  |||||| | ||||||||||  |||||||||||| |||||||||||||||||| ||||||||| ||  || ||||    
T  35190533 ggtccttttaatttgacagaattttcaagttacttctttaagttttgaaagtttcaattaggtccttttagtttgacaaaattctcaaatttgtctttta 35190434  T
Q  189 agtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    |||||| ||| | || |||||||||||||||||||||||||||||||    
T  35190433 agtttc-aattggtctttttagttgataaactatttcaccgttaccc 35190388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 115 - 235
Target Start/End: Original strand, 35189943 - 35190062
Alignment:
Q  115 aagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaatagatcattttagttga 214  Q
    ||||||||| |||||||||| ||||||| || | |||| |||||||||||||||| || ||||||| || ||||||||||||| ||||||||||||||||    
T  35189943 aagttagtc-tttaagtttcgaaagttttaaataggtcattttagtttgacagaactcccaagttagtcctttaagtttcaaaaagatcattttagttga 35190041  T
Q  215 taaactatttcaccgttaccc 235  Q
    ||||||||||||| |||||||    
T  35190042 taaactatttcactgttaccc 35190062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 89 - 193
Target Start/End: Original strand, 18951306 - 18951410
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||||||| |||| | |||||||||||||||||||||||||||| || | | |||||||||||||| ||||||||||||||| || ||||    
T  18951306 ggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaaagttttaaatagatccttttagtttgatagaattctcaagttagtccttta 18951405  T
Q  189 agttt 193  Q
    |||||    
T  18951406 agttt 18951410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 89 - 180
Target Start/End: Original strand, 14235571 - 14235662
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagtta 180  Q
    |||||||||||||||| | ||||| |||||||||||||||||||  |||||||| |||| ||||||||||||||||||||||||||||||||    
T  14235571 ggtccttttagtttgaaataatttttaagttagtcctttaagttctaaaagttttaattaggtccttttagtttgacagaattctcaagtta 14235662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 82 - 197
Target Start/End: Original strand, 32660255 - 32660370
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaa 181  Q
    ||||||| || |||||||||| ||||||||   ||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||  ||||||     
T  32660255 tcaattatgttcttttagttttacaaaattctcaagttagtcctttaagtttcaaaagtttcaaataggtcattttagtttgacagaattcctaagttag 32660354  T
Q  182 tcatttaagtttcaaa 197  Q
    || |||||||||||||    
T  32660355 tcctttaagtttcaaa 32660370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 1722503 - 1722611
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||| ||||||||   ||||||||||||||| |||||||||||| || | | | |||||||||||||| |||||||||||||||| ||||    
T  1722503 ggtccttttagtttaacaaaattcacaagttagtcctttaattttcaaaagttttaaatagattcttttagtttgacataattctcaagttaatccttta 1722602  T
Q  189 agtttcaaa 197  Q
    |||||||||    
T  1722603 agtttcaaa 1722611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 6336146 - 6336254
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    ||||||||||||||| || |||||| |||||||||||||||||||||||||||| || | |||| ||||||||||| ||||||  ||||||| || ||||    
T  6336146 ggtccttttagtttggcagaatttccaagttagtcctttaagtttcaaaagttttaaataggtcattttagtttgaaagaatttccaagttagtccttta 6336245  T
Q  189 agtttcaaa 197  Q
    |||||||||    
T  6336246 agtttcaaa 6336254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 32660202 - 32660310
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||| ||||||||| ||| ||||||||||||| ||||||||||||| ||||||||||||  || |||||||||| ||| ||||||||||||| || ||||    
T  32660202 ggtctttttagttttacataatttctaagttaatcctttaagtttcgaaagtttcaattatgttcttttagttttacaaaattctcaagttagtccttta 32660301  T
Q  189 agtttcaaa 197  Q
    |||||||||    
T  32660302 agtttcaaa 32660310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 41 - 161
Target Start/End: Complemental strand, 36418509 - 36418389
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    |||||| |||||  || |||||| |||  ||| ||| ||| ||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||    
T  36418509 ttgacataattctcaagttagtcctttacgtttcaaaagtttcaattaggtccttttagtttgacataattttcaagttagtcctttaagtttcaaaagt 36418410  T
Q  141 ttcaatttggtccttttagtt 161  Q
    ||||| | |||||||||||||    
T  36418409 ttcaaataggtccttttagtt 36418389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 235
Target Start/End: Original strand, 19278710 - 19278862
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaag 190  Q
    |||||||||||||||| ||||  |||||||||||||||| |||||||| ||| |||| | | ||||||||||||||||||||||||||||    ||||||    
T  19278710 tccttttagtttgacagaattcttaagttagtcctttaaatttcaaaa-ttttaattagcttcttttagtttgacagaattctcaagttacctctttaag 19278808  T
Q  191 ---------tttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
             ||||||||| ||||||||||||||||||||||||||| |||||||    
T  19278809 tttcaataatttcaaataaatcattttagttgataaactatttcactgttaccc 19278862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 249 - 338
Target Start/End: Original strand, 20728726 - 20728814
Alignment:
Q  249 ttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    ||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||| ||||    
T  20728726 ttaagttgt-gacttggatcaaaacgctgtcttttaaaagctccagagtgtcaaaacactatgtttaatggtcacaaatgatcatttata 20728814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 230
Target Start/End: Complemental strand, 38405654 - 38405518
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaag 190  Q
    |||||||||||| ||| |||| | |||||| || |||||||||| ||||||||||||  ||| |||||||||| ||||||||||||   | || ||||||    
T  38405654 tccttttagtttcacagaattcccaagttaatcatttaagtttcgaaagtttcaattatgtcattttagtttggcagaattctcaa---agtcctttaag 38405558  T
Q  191 tttcaaatagatcattttagttgataaactatttcaccgt 230  Q
    ||| |||||  || ||||||||||||||||||||||||||    
T  38405557 ttttaaatatgtccttttagttgataaactatttcaccgt 38405518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 18248961 - 18249116
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||||| | ||||| ||||||| || |||| ||||  ||||||| || |  ||||||||||||| ||||||||||||||||| |||||||    
T  18248961 ggtccttttagtttgatagaatttttaagttaatcttttacgttttgaaagttttaactatgtccttttagtttaacagaattctcaagttagtcattta 18249060  T
Q  189 agtttc---------aaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    ||||||         |||||| || |||||||||||||||||||||| ||||||||    
T  18249061 agtttcaaaagttttaaataggtctttttagttgataaactatttcatcgttaccc 18249116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 247 - 333
Target Start/End: Original strand, 35190100 - 35190186
Alignment:
Q  247 cgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    |||||||||||||||||| ||||||||| || |||| |||||||| || ||||| |||||||||||||||||||||||||| |||||    
T  35190100 cgttaagttgttgacttggatcaaaatgttgcctttcaaaagctctagggtgtccaaacgctacgtttaatggtcacaaatgatcat 35190186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 5735101 - 5734947
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    ||||||||||||||||   ||||   ||||||||| ||||| |||| ||| ||| ||||  ||||||||||||| ||||||||||||||||| || ||||    
T  5735101 ggtccttttagtttgatcgaattctcaagttagtcatttaaatttcgaaaattttaattatgtccttttagtttaacagaattctcaagttagtccttta 5735002  T
Q  189 agtt--------tcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    ||||        |||||||| ||||||||||||||||||||||||||| ||||||    
T  5735001 agttcaaaagtttcaaataggtcattttagttgataaactatttcaccattaccc 5734947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 151 - 227
Target Start/End: Original strand, 38082621 - 38082697
Alignment:
Q  151 tccttttagtttgacagaattctcaagttaatcatttaagtttcaaatagatcattttagttgataaactatttcac 227  Q
    |||||||||||| ||||||||||||||||| || ||||| ||| |||||| ||||||||||||||||||||||||||    
T  38082621 tccttttagtttcacagaattctcaagttagtcttttaaattttaaataggtcattttagttgataaactatttcac 38082697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 247 - 338
Target Start/End: Original strand, 19278900 - 19278991
Alignment:
Q  247 cgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    |||||||||||||||||| ||||||| | ||||||||||||| |||||  |||||||||||||||||||||  |||||||| ||||| ||||    
T  19278900 cgttaagttgttgacttggatcaaaacgttgtcttttaaaagttccaggatgtcaaaacgctacgtttaattatcacaaatgatcatttata 19278991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 58 - 145
Target Start/End: Original strand, 32660291 - 32660378
Alignment:
Q  58 ttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    |||||| ||| |||| ||| ||| |||| |||||| ||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  32660291 ttagtcctttaagtttcaaaagtttcaaataggtcattttagtttgacagaattcctaagttagtcctttaagtttcaaaagtttcaa 32660378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 41 - 175
Target Start/End: Original strand, 18951318 - 18951452
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    ||||||||||||| || |||||| ||| |||| ||| ||| | || ||| |||||||||||||| | ||||   ||||||||||||||||||| ||||||    
T  18951318 ttgacagaattcccaagttagtcctttaagtttcaaaagttttaaatagatccttttagtttgatagaattctcaagttagtcctttaagttttaaaagt 18951417  T
Q  141 ttcaatttggtccttttagtttgacagaattctca 175  Q
    || || | |||| ||||||||||| ||||||||||    
T  18951418 tttaaataggtcattttagtttgatagaattctca 18951452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 243 - 333
Target Start/End: Complemental strand, 36418330 - 36418240
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    |||||||||||||||||||||| ||||||| | ||||||||||||||||| | | ||||||||  |||||||||| ||||||||| |||||    
T  36418330 tagccgttaagttgttgacttgaatcaaaacgttgtcttttaaaagctccggtgagtcaaaacattacgtttaatcgtcacaaatgatcat 36418240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 258 - 327
Target Start/End: Complemental strand, 26275925 - 26275856
Alignment:
Q  258 tgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaat 327  Q
    ||||||| |||||||||||| ||||||||||||| | |||||||||||| ||||||||||||||||||||    
T  26275925 tgacttggatcaaaatgctgccttttaaaagctctatagtgtcaaaacggtacgtttaatggtcacaaat 26275856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 146 - 235
Target Start/End: Complemental strand, 26276063 - 26275974
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    |||| |||||||||||||||| ||||  ||||||| || |||||||||||||||  || ||||||||||||| |||||||||||||||||    
T  26276063 tttgatccttttagtttgacaaaatttccaagttagtcctttaagtttcaaatatgtccttttagttgataagctatttcaccgttaccc 26275974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 91 - 235
Target Start/End: Complemental strand, 30738377 - 30738223
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattt--- 187  Q
    |||||||||||||||| |||||| ||||||||  |||||||||| ||| ||| |||| |||| ||||| ||||||||||||||||||||  || |||       
T  30738377 tccttttagtttgacagaatttcgaagttagtattttaagtttcgaaa-ttttaattaggtcattttaatttgacagaattctcaagtttgtcctttatg 30738279  T
Q  188 ------aagtttcaaatagatcattttagt--tgataaactatttcaccgttaccc 235  Q
          ||||||||||||  ||||||||||  ||||||||||||||||||||||||    
T  30738278 tttcaaaagtttcaaatatgtcattttagttgtgataaactatttcaccgttaccc 30738223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 164
Target Start/End: Original strand, 13543087 - 13543162
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttga 164  Q
    |||||||||||||||||| |||| |||||||| | ||||||||||| |||||||||||| |||| |||||||||||    
T  13543087 ggtccttttagtttgacataattcctaagttaattctttaagtttcgaaagtttcaattaggtctttttagtttga 13543162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 243 - 338
Target Start/End: Original strand, 18249150 - 18249245
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    |||||||| ||||||||| ||| ||||||||||||  |||||||||||| || ||||||||||| ||| |||||| ||||||||| ||||| ||||    
T  18249150 tagccgttgagttgttgatttggatcaaaatgctgcattttaaaagctctagggtgtcaaaacgttacatttaatagtcacaaatgatcatttata 18249245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 243 - 338
Target Start/End: Complemental strand, 18321153 - 18321059
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    |||||||||||| ||||| ||| ||||||||| ||||||||||||| || || ||| ||||| |||||||||||||||||||||| ||||| ||||    
T  18321153 tagccgttaagtagttga-ttggatcaaaatgttgtcttttaaaagttcgagggtgccaaaatgctacgtttaatggtcacaaatgatcatttata 18321059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 201
Target Start/End: Complemental strand, 31814006 - 31813951
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaataga 201  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  31814006 tttggtccttttagtttgacagaattcccaagttagtcatttaagtttcaaataga 31813951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 243 - 333
Target Start/End: Complemental strand, 20728977 - 20728887
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    |||| ||||||||||||||||  ||||||| ||||  ||||||||||||||| ||||||||||| || ||||||| ||||||||| |||||    
T  20728977 tagctgttaagttgttgactttgatcaaaacgctgcattttaaaagctccagggtgtcaaaacgttaagtttaattgtcacaaatgatcat 20728887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 247 - 333
Target Start/End: Original strand, 30737936 - 30738022
Alignment:
Q  247 cgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    |||||||||||||||||| |||||||| |||| |||||||||| |||  ||||||||| | |||||||||| ||||||||| |||||    
T  30737936 cgttaagttgttgacttggatcaaaatactgttttttaaaagccccaaggtgtcaaaatgttacgtttaatcgtcacaaatgatcat 30738022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 146 - 235
Target Start/End: Original strand, 32459427 - 32459525
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc---------aaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    ||||||||||||||||||||| ||||| ||||||| |||||||||||||         |||||| |||||||||||||||||||||||||| |||||||    
T  32459427 tttggtccttttagtttgacaaaattcacaagttagtcatttaagtttcaaaagttttaaataggtcattttagttgataaactatttcactgttaccc 32459525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 250 - 323
Target Start/End: Original strand, 13543285 - 13543358
Alignment:
Q  250 taagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcac 323  Q
    ||||||||||||||| ||||||| | || |||||||||| | ||| ||||||||||||||||||||||||||||    
T  13543285 taagttgttgacttggatcaaaacgttgccttttaaaagtttcagggtgtcaaaacgctacgtttaatggtcac 13543358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 246 - 327
Target Start/End: Complemental strand, 13543531 - 13543450
Alignment:
Q  246 ccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaat 327  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||| ||  || |||||||  ||||||||||||||| ||||    
T  13543531 ccgttaagttgttgacttggatcaaaatgttgtcttttaaaagcttcaaggtatcaaaacattacgtttaatggtcaaaaat 13543450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 338
Target Start/End: Complemental strand, 5734911 - 5734819
Alignment:
Q  246 ccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    ||||||||||||||||||  |||||||||||| ||||||||||| | |  ||||||||| |||||||||| || |||||||| ||||| ||||    
T  5734911 ccgttaagttgttgacttaaatcaaaatgctgccttttaaaagcccgatggtgtcaaaatgctacgtttattgatcacaaatgatcatttata 5734819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 45 - 145
Target Start/End: Original strand, 6336162 - 6336262
Alignment:
Q  45 cagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttca 144  Q
    ||||||| | || |||||| ||| |||| ||| ||| | || |||||| ||||||||||| | |||||| ||||||||||||||||||||||||||||||    
T  6336162 cagaatttccaagttagtcctttaagtttcaaaagttttaaataggtcattttagtttgaaagaatttccaagttagtcctttaagtttcaaaagtttca 6336261  T
Q  145 a 145  Q
    |    
T  6336262 a 6336262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 338
Target Start/End: Complemental strand, 38405483 - 38405392
Alignment:
Q  246 ccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    ||||||||||||| ||||| ||||||||| ||| ||||||||||||||  |||| |||||| |||||||||||| ||||||| ||||| ||||    
T  38405483 ccgttaagttgttaacttggatcaaaatgttgtattttaaaagctcca-tgtgttaaaacgttacgtttaatgggcacaaatgatcatttata 38405392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 5734466 - 5734620
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattt- 187  Q
    |||||||||| ||||||  ||||| ||||||| | ||||||||||  ||||||||||||  ||| ||||| |||||||||||||  ||||| ||| |||     
T  5734466 ggtccttttaatttgactgaatttttaagttacttctttaagttttgaaagtttcaattatgtcattttaatttgacagaattcctaagtt-atccttta 5734564  T
Q  188 --------aagtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
            ||||||||||||  ||||||||||| ||||||||||||||||||||||    
T  5734565 agttttaaaagtttcaaataagtcattttagttaataaactatttcaccgttaccc 5734620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 243 - 338
Target Start/End: Complemental strand, 30738189 - 30738094
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    |||||||||||||||||||||  ||||||||  ||||||||||||| |  || |||||||| | ||| ||||||| ||||||||||||||| ||||    
T  30738189 tagccgttaagttgttgacttagatcaaaataatgtcttttaaaagtttaagggtgtcaaaccactatgtttaatagtcacaaattatcatttata 30738094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 333
Target Start/End: Original strand, 5734657 - 5734746
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    ||||||||||||| |||||||  ||||||| | ||||||| ||||||||||  ||||||||||| |||||||||| ||||||||| |||||    
T  5734657 tagccgttaagtttttgactttgatcaaaacgttgtcttt-aaaagctccaaggtgtcaaaacgttacgtttaatcgtcacaaatgatcat 5734746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 161
Target Start/End: Complemental strand, 20729103 - 20729033
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    |||||||||||||||| |||||  ||||||||||||||| ||| ||||||||||| | |||||||||||||    
T  20729103 tccttttagtttgacagaattttcaagttagtcctttaaattttaaaagtttcaaataggtccttttagtt 20729033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 137
Target Start/End: Complemental strand, 26276058 - 26276012
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaa 137  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  26276058 tccttttagtttgacaaaatttccaagttagtcctttaagtttcaaa 26276012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 333
Target Start/End: Complemental strand, 35190354 - 35190264
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    |||| ||||| ||||||||||  |||||||||||| |||||||||||| ||| ||||||||| | |||||||||| ||| ||||| |||||    
T  35190354 tagcggttaatttgttgactttgatcaaaatgctgccttttaaaagcttcagggtgtcaaaatgttacgtttaatcgtcgcaaatgatcat 35190264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 145
Target Start/End: Complemental strand, 35891320 - 35891266
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    |||||||||||||||| |||||  |||||||||||||||||||||||||||||||    
T  35891320 tccttttagtttgacataattttcaagttagtcctttaagtttcaaaagtttcaa 35891266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 327
Target Start/End: Original strand, 1722685 - 1722769
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaat 327  Q
    |||||||||| ||||||||||| ||||||| |||| |||||||||||| ||| ||||||||| | ||| || |||| ||||||||    
T  1722685 tagccgttaaattgttgacttggatcaaaacgctgccttttaaaagcttcagggtgtcaaaatgttacattcaatgatcacaaat 1722769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 18951302 - 18951354
Alignment:
Q  145 atttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    |||||||||||||||||||||||||||| ||||||| || |||||||||||||    
T  18951302 atttggtccttttagtttgacagaattcccaagttagtcctttaagtttcaaa 18951354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 145
Target Start/End: Original strand, 20728543 - 20728647
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    ||||||||||| | || |||||| ||| |||| | | ||  ||||||||||||||||||||| ||| ||||   ||||||||||||||||||| ||||||    
T  20728543 ttgacagaatttccaagttagtcctttaagtttcgaaagattcaattaggtccttttagtttaacagaattctcaagttagtcctttaagttttaaaagt 20728642  T
Q  141 ttcaa 145  Q
    |||||    
T  20728643 ttcaa 20728647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 32459430 - 32459502
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    |||||||||||||||||||||||   ||||||||| |||||||||||||||||| || | |||| ||||||||    
T  32459430 ggtccttttagtttgacaaaattcacaagttagtcatttaagtttcaaaagttttaaataggtcattttagtt 32459502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 161
Target Start/End: Complemental strand, 18238390 - 18238327
Alignment:
Q  98 agtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    |||||||||||||||| ||||||||| |||||||||||||||||| || | |||| ||||||||    
T  18238390 agtttgacaaaatttccaagttagtcgtttaagtttcaaaagttttaaataggtcattttagtt 18238327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 94 - 197
Target Start/End: Original strand, 30737748 - 30737851
Alignment:
Q  94 ttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagttt 193  Q
    ||||| ||||||| ||||   |||||| || ||||| |||| ||||||||||||  ||| ||||||||||||| ||||||||| ||| || |||||||||    
T  30737748 ttttaatttgacagaattctcaagttaatcatttaaatttcgaaagtttcaattacgtctttttagtttgacataattctcaaattagtcttttaagttt 30737847  T
Q  194 caaa 197  Q
    ||||    
T  30737848 caaa 30737851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 250 - 338
Target Start/End: Original strand, 36418075 - 36418167
Alignment:
Q  250 taagttgttgacttgtatcaaaatgctgtcttttaaaagctccagag----tgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    ||||||||||||||| ||| |||||||| ||||||| ||||| || |    |||| |||||||||||||||||||||||||| ||||| ||||    
T  36418075 taagttgttgacttgaatcgaaatgctgccttttaatagctcgagggtgcatgtctaaacgctacgtttaatggtcacaaatgatcatttata 36418167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 235
Target Start/End: Original strand, 38405112 - 38405194
Alignment:
Q  152 ccttttagtttgacagaattctcaagttaatcatttaagtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    ||||| ||||||||| ||||  |||||||||  |||||||||||||||  ||||||||||||||||||| ||| ||||||||||    
T  38405112 cctttaagtttgacataattaccaagttaatt-tttaagtttcaaatatgtcattttagttgataaactgttttaccgttaccc 38405194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 91 - 145
Target Start/End: Complemental strand, 19279290 - 19279236
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    |||||||||||||||||||||  |||||||||  |||||||||||||||||||||    
T  19279290 tccttttagtttgacaaaattcttaagttagttttttaagtttcaaaagtttcaa 19279236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 151 - 235
Target Start/End: Complemental strand, 20729103 - 20729010
Alignment:
Q  151 tccttttagtttgacagaattctcaagttaatcatttaa---------gtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    ||||||||||||||||||||| |||||||| || |||||         ||||||||||| || |||||||||||||||||||||||| ||||||    
T  20729103 tccttttagtttgacagaattttcaagttagtcctttaaattttaaaagtttcaaataggtccttttagttgataaactatttcaccattaccc 20729010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 82 - 142
Target Start/End: Complemental strand, 1723043 - 1722983
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagttt 142  Q
    |||||||  |||||||||||| |||||||||||||||||||  ||||||||| ||||||||    
T  1723043 tcaattaaatccttttagtttaacaaaatttctaagttagtgttttaagttttaaaagttt 1722983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 93 - 161
Target Start/End: Original strand, 18237919 - 18237987
Alignment:
Q  93 cttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    |||||||||||||| ||||| ||||||| |||||||||||| |||||||| || |  ||||||||||||    
T  18237919 cttttagtttgacagaatttttaagttaatcctttaagttttaaaagttttaaataagtccttttagtt 18237987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 38405659 - 38405611
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    |||| |||||||||||| ||||||||| |||||||||||||||||||||    
T  38405659 tttgatccttttagtttcacagaattcccaagttaatcatttaagtttc 38405611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 1722988 - 1722941
Alignment:
Q  188 aagtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    |||||| ||||| ||||||||||||||||||||||||||| |||||||    
T  1722988 aagttttaaatatatcattttagttgataaactatttcactgttaccc 1722941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 232
Target Start/End: Original strand, 35890878 - 35890921
Alignment:
Q  189 agtttcaaatagatcattttagttgataaactatttcaccgtta 232  Q
    ||||||| |||| |||||||||||||||||||||||||||||||    
T  35890878 agtttcagatagctcattttagttgataaactatttcaccgtta 35890921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 82 - 140
Target Start/End: Complemental strand, 18321281 - 18321223
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    |||||||||| |||||| ||||||| ||||| |||||||||||||||| ||| ||||||    
T  18321281 tcaattaggttcttttaatttgacagaatttttaagttagtcctttaaattttaaaagt 18321223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 146 - 212
Target Start/End: Complemental strand, 20729159 - 20729093
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaatagatcattttagtt 212  Q
    ||||||||||||||||||| | |||| |||||||| || ||||| ||| ||||||||| ||||||||    
T  20729159 tttggtccttttagtttgataaaattatcaagttagtcctttaaattttaaatagatccttttagtt 20729093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 247 - 333
Target Start/End: Original strand, 26275686 - 26275772
Alignment:
Q  247 cgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    |||||||||||| ||||  ||||||||| || ||||||||||||| ||  |||||||| | |||||| | ||||||||||| |||||    
T  26275686 cgttaagttgttaacttagatcaaaatgatgccttttaaaagctctaggatgtcaaaaagttacgttcagtggtcacaaatgatcat 26275772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 93 - 162
Target Start/End: Original strand, 1722567 - 1722636
Alignment:
Q  93 cttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagttt 162  Q
    |||||||||||||| ||||   |||||| |||||||||||||||||||||||| |  ||| |||||||||    
T  1722567 cttttagtttgacataattctcaagttaatcctttaagtttcaaaagtttcaaatatgtcattttagttt 1722636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 161
Target Start/End: Complemental strand, 5735046 - 5734970
Alignment:
Q  84 aattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    ||||| ||||||||||||| ||| ||||   |||||||||||||||| |||||||||||||| | |||| ||||||||    
T  5735046 aattatgtccttttagtttaacagaattctcaagttagtcctttaag-ttcaaaagtttcaaataggtcattttagtt 5734970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 145
Target Start/End: Original strand, 13543099 - 13543206
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagtta---gtcctttaagtttcaaa 137  Q
    |||||| ||||||||| ||| |  ||| |||| | | ||| ||||||||||| |||||||||||   |||||| ||||||   |||||||||||||||||    
T  13543099 ttgacataattcctaagttaattctttaagtttcgaaagtttcaattaggtctttttagtttgatggaatttccaagttattagtcctttaagtttcaaa 13543198  T
Q  138 agtttcaa 145  Q
    ||||||||    
T  13543199 agtttcaa 13543206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 18238351 - 18238306
Alignment:
Q  188 aagtttcaaatagatcattttagttgataaactatttcaccgttac 233  Q
    |||||| |||||| ||||||||||||||||| ||||||||||||||    
T  18238351 aagttttaaataggtcattttagttgataaattatttcaccgttac 18238306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 145 - 194
Target Start/End: Original strand, 30737739 - 30737788
Alignment:
Q  145 atttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    |||| ||| ||||| |||||||||||||||||||||||||||||| ||||    
T  30737739 atttcgtctttttaatttgacagaattctcaagttaatcatttaaatttc 30737788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 332
Target Start/End: Complemental strand, 19279149 - 19279065
Alignment:
Q  248 gttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatca 332  Q
    ||||||||||| ||||| ||||||| | ||  |||||||| |||||| ||||||||||  ||| ||||||||||| |||| ||||    
T  19279149 gttaagttgttaacttggatcaaaacgttgcattttaaaatctccagggtgtcaaaacattacatttaatggtcataaatgatca 19279065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 31814003 - 31813955
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaa 137  Q
    |||||||||||||||||| |||| | ||||||||| |||||||||||||    
T  31814003 ggtccttttagtttgacagaattcccaagttagtcatttaagtttcaaa 31813955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 82 - 145
Target Start/End: Original strand, 5734519 - 5734581
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    ||||||| ||| ||||| ||||||| |||| |||||||| |||||||||||| |||||||||||    
T  5734519 tcaattatgtcattttaatttgacagaattcctaagtta-tcctttaagttttaaaagtttcaa 5734581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 82 - 145
Target Start/End: Complemental strand, 6336395 - 6336332
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    |||||||| | |||||| |||| || |||| ||||||||||||||||| ||||||| |||||||    
T  6336395 tcaattagattcttttaatttgtcagaattcctaagttagtcctttaaatttcaaatgtttcaa 6336332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 231
Target Start/End: Original strand, 13543198 - 13543241
Alignment:
Q  188 aagtttcaaatagatcattttagttgataaactatttcaccgtt 231  Q
    ||||||||||||  ||||||||||||||||| ||||||||||||    
T  13543198 aagtttcaaatatgtcattttagttgataaattatttcaccgtt 13543241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 197
Target Start/End: Original strand, 19278705 - 19278756
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    |||| ||||||||||||||||||||||| |||||| || ||||| |||||||    
T  19278705 tttgatccttttagtttgacagaattcttaagttagtcctttaaatttcaaa 19278756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 236 - 327
Target Start/End: Original strand, 32459543 - 32459634
Alignment:
Q  236 gttggtatagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaat 327  Q
    |||| ||| |||||||||||| || |||  ||||||| |||   ||||||| ||||||| |||||||||| || | ||||||||||||||||    
T  32459543 gttgatatggccgttaagttgctgccttagatcaaaacgctacattttaaaggctccagtgtgtcaaaactctgcatttaatggtcacaaat 32459634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 87 - 138
Target Start/End: Original strand, 35189974 - 35190025
Alignment:
Q  87 taggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaa 138  Q
    |||||| ||||||||||||| || | | ||||||||||||||||||||||||    
T  35189974 taggtcattttagtttgacagaactcccaagttagtcctttaagtttcaaaa 35190025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 35891325 - 35891274
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    |||| |||||||||||||||| |||| |||||||| || |||||||||||||    
T  35891325 tttgatccttttagtttgacataattttcaagttagtcctttaagtttcaaa 35891274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 36417942 - 36417997
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaa 137  Q
    |||||||||| ||||| |||||||| ||||   |||||||||||||||||||||||    
T  36417942 tcaattaggttcttttggtttgacataattctcaagttagtcctttaagtttcaaa 36417997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 197
Target Start/End: Complemental strand, 36418524 - 36418473
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    ||||||| ||||||||||||| ||||||||||||| || |||| ||||||||    
T  36418524 tttggtctttttagtttgacataattctcaagttagtcctttacgtttcaaa 36418473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 193
Target Start/End: Original strand, 40744974 - 40745021
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagttt 193  Q
    |||| |||||||||||||| |||||| ||||||||||| |||||||||    
T  40744974 tttgctccttttagtttgatagaattttcaagttaatcttttaagttt 40745021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 194
Target Start/End: Complemental strand, 5735102 - 5735056
Alignment:
Q  148 tggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    |||||||||||||||||  |||||||||||||| |||||||| ||||    
T  5735102 tggtccttttagtttgatcgaattctcaagttagtcatttaaatttc 5735056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 84 - 145
Target Start/End: Original strand, 14235626 - 14235685
Alignment:
Q  84 aattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    ||||||||||||||||||||||| ||||   |||||||||||||  |||||| |||||||||    
T  14235626 aattaggtccttttagtttgacagaattctcaagttagtccttt--gtttcacaagtttcaa 14235685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 82 - 136
Target Start/End: Complemental strand, 35190480 - 35190426
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaa 136  Q
    ||||||||||||||||||||||||||||||   || || ||| ||||||||||||    
T  35190480 tcaattaggtccttttagtttgacaaaattctcaaatttgtcttttaagtttcaa 35190426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 198
Target Start/End: Complemental strand, 6336412 - 6336339
Alignment:
Q  125 tttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaat 198  Q
    |||||||||| |||||||||||| | | |||||| |||| ||||||||  |||||| || ||||| ||||||||    
T  6336412 tttaagtttcgaaagtttcaattagattcttttaatttgtcagaattcctaagttagtcctttaaatttcaaat 6336339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 30738325 - 30738264
Alignment:
Q  84 aattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    ||||||||| ||||| ||||||| ||||   ||||| |||||||| ||||||||||||||||    
T  30738325 aattaggtcattttaatttgacagaattctcaagtttgtcctttatgtttcaaaagtttcaa 30738264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 162
Target Start/End: Complemental strand, 35342365 - 35342324
Alignment:
Q  121 gtcctttaagtttcaaaagtttcaatttggtccttttagttt 162  Q
    ||||||||||||||||||||||||| |  |||||||||||||    
T  35342365 gtcctttaagtttcaaaagtttcaaataagtccttttagttt 35342324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 13543084 - 13543132
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    ||||||||||||||||||||| |||||  ||||||||  ||||||||||    
T  13543084 tttggtccttttagtttgacataattcctaagttaattctttaagtttc 13543132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #90
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 153 - 193
Target Start/End: Original strand, 18237919 - 18237959
Alignment:
Q  153 cttttagtttgacagaattctcaagttaatcatttaagttt 193  Q
    ||||||||||||||||||| | ||||||||| |||||||||    
T  18237919 cttttagtttgacagaatttttaagttaatcctttaagttt 18237959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #91
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 276
Target Start/End: Original strand, 18320898 - 18320930
Alignment:
Q  244 agccgttaagttgttgacttgtatcaaaatgct 276  Q
    ||||||||||||||||||||| |||||||||||    
T  18320898 agccgttaagttgttgacttggatcaaaatgct 18320930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #92
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 20728528 - 20728576
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    ||||||| ||||||||||||||||||  ||||||| || ||||||||||    
T  20728528 tttggtctttttagtttgacagaatttccaagttagtcctttaagtttc 20728576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #93
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 137
Target Start/End: Original strand, 26275519 - 26275615
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaa 137  Q
    ||||||||||| |||| |||||  ||| |||| ||| ||| |||| ||| || ||||||||||||  |||| | ||||||||| || ||||||||||    
T  26275519 ttgacagaatttctaagttagttctttaagtttcaaaagtttcaaatagatcattttagtttgacggaattcccaagttagtcattcaagtttcaaa 26275615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #94
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 82 - 142
Target Start/End: Original strand, 30737796 - 30737856
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagttt 142  Q
    ||||||| ||| ||||||||||||| ||||   || |||||| ||||||||||||||||||    
T  30737796 tcaattacgtctttttagtttgacataattctcaaattagtcttttaagtttcaaaagttt 30737856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #95
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 326
Target Start/End: Complemental strand, 32459732 - 32459704
Alignment:
Q  298 gtcaaaacgctacgtttaatggtcacaaa 326  Q
    |||||||||||||||||||||||||||||    
T  32459732 gtcaaaacgctacgtttaatggtcacaaa 32459704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #96
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 36417886 - 36417934
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    |||| |||||||||||| ||||||||||||||||| || ||||| ||||    
T  36417886 tttgatccttttagtttaacagaattctcaagttagtcctttaaatttc 36417934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 4e-38; HSPs: 71)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 41 - 197
Target Start/End: Original strand, 30907088 - 30907244
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    ||||||||||||  || |||||||||| |||| | | ||| ||||||||||||||||||||||||| ||||   ||||||||||||||||||||||||||    
T  30907088 ttgacagaattctcaagttagtcttttaagtttcgaaagtttcaattaggtccttttagtttgacataattctcaagttagtcctttaagtttcaaaagt 30907187  T
Q  141 ttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    ||||| | | ||||||||| |||||| ||||| ||||||| ||||||||||||||||    
T  30907188 ttcaaatagatccttttagattgacataattcccaagttagtcatttaagtttcaaa 30907244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 91 - 229
Target Start/End: Complemental strand, 41265364 - 41265226
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaag 190  Q
    |||||||||||||| | ||||   ||||||||| |||||||||| ||||||||||||  ||||| ||| ||||||||||||||||||||| || ||||||    
T  41265364 tccttttagtttgagagaattatcaagttagtcatttaagtttcgaaagtttcaattatgtcctcttaatttgacagaattctcaagttagtcctttaag 41265265  T
Q  191 tttcaaatagatcattttagttgataaactatttcaccg 229  Q
    |||||||||  ||||||||||||||||||||||||||||    
T  41265264 tttcaaataagtcattttagttgataaactatttcaccg 41265226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 89 - 232
Target Start/End: Complemental strand, 27893682 - 27893530
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||||||||||||   ||||||||||||||||||||  ||||||||||| ||| |||||||||||||||||||| ||||||| || ||||    
T  27893682 ggtccttttagtttgacaaaattctcaagttagtcctttaagtttcgtaagtttcaattaggttcttttagtttgacagaattcccaagttagtccttta 27893583  T
Q  189 agttt---------caaatagatcattttagttgataaactatttcaccgtta 232  Q
    |||||         ||||||||||||||||||||||||||||||||| |||||    
T  27893582 agtttcaaaagtttcaaatagatcattttagttgataaactatttcatcgtta 27893530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 31263927 - 31264035
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||| ||||||||||||| |||||| |||||| ||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||| || ||||    
T  31263927 ggtctttttagtttgacagaatttccaagttaatcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaattctcaagttagtccttta 31264026  T
Q  189 agtttcaaa 197  Q
    |||||||||    
T  31264027 agtttcaaa 31264035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 89 - 234
Target Start/End: Original strand, 27893037 - 27893182
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||||||| ||||   |||||| |||||||| |||| ||||||||||||   || |||||||||||||| |||| ||||||| || ||||    
T  27893037 ggtccttttagtttgacagaattctcaagttaatcctttaaatttcgaaagtttcaattatatctttttagtttgacagtattcccaagttagtccttta 27893136  T
Q  189 agtttcaaatagatcattttagttgataaactatttcaccgttacc 234  Q
    |||||||||||| || |||||||||||||||||||||| |||||||    
T  27893137 agtttcaaataggtctttttagttgataaactatttcaacgttacc 27893182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 36196623 - 36196470
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattt- 187  Q
    |||||||||||||||||||  |||  || ||||||||||||||||| |||||||||||| |||| ||||||||||||||||||  ||||||| ||||||     
T  36196623 ggtccttttagtttgacaa--ttttcaaattagtcctttaagtttcgaaagtttcaattaggtctttttagtttgacagaatttccaagttagtcatttg 36196526  T
Q  188 --------aagtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
            ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  36196525 agtttcaaaagtttcaaataggtcattttagttgataaactatttcaccgttaccc 36196470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 89 - 233
Target Start/End: Complemental strand, 39301945 - 39301801
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||||| | ||||| |||||||||||||||| ||| |||||||| ||||   || |||||||||||||||||| | |||||| |  ||||    
T  39301945 ggtccttttagtttgatagaatttttaagttagtcctttaaattttaaaagttttaattaaatctttttagtttgacagaatttttaagttatttcttta 39301846  T
Q  189 agtttcaaatagatcattttagttgataaactatttcaccgttac 233  Q
    ||||||||||||  ||||||||||||||||||||||||| |||||    
T  39301845 agtttcaaataggccattttagttgataaactatttcactgttac 39301801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 91 - 197
Target Start/End: Complemental strand, 30907434 - 30907327
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtcctttt-agtttgacagaattctcaagttaatcatttaa 189  Q
    |||||||||||||||||||||| |||||||||| |||||||||| |||||||||||| ||||||||| ||||||| ||||||||||||||| || |||||    
T  30907434 tccttttagtttgacaaaatttataagttagtcatttaagtttcgaaagtttcaattaggtccttttaagtttgaaagaattctcaagttagtcctttaa 30907335  T
Q  190 gtttcaaa 197  Q
    ||||||||    
T  30907334 gtttcaaa 30907327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 241 - 338
Target Start/End: Complemental strand, 36196438 - 36196341
Alignment:
Q  241 tatagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||| ||| || |||||||||||||||||||||||||||||||| ||||| ||||    
T  36196438 tatagccgttaagttgttgacttggatcaaaatgctgccttttaaaaactcgagggtgtcaaaacgctacgtttaatggtcacaaatgatcatttata 36196341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 93 - 197
Target Start/End: Original strand, 30907080 - 30907184
Alignment:
Q  93 cttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtt 192  Q
    |||||||||||||| ||||   ||||||||| |||||||||| |||||||||||| |||||||||||||||||| ||||||||||||| || ||||||||    
T  30907080 cttttagtttgacagaattctcaagttagtcttttaagtttcgaaagtttcaattaggtccttttagtttgacataattctcaagttagtcctttaagtt 30907179  T
Q  193 tcaaa 197  Q
    |||||    
T  30907180 tcaaa 30907184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 41 - 197
Target Start/End: Original strand, 31263939 - 31264095
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    ||||||||||| | || ||| || ||| |||| | | ||| ||||||||||||||||||||||||| ||||   ||||||||||||||||||||||||||    
T  31263939 ttgacagaatttccaagttaatcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaattctcaagttagtcctttaagtttcaaaagt 31264038  T
Q  141 ttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    ||||| | ||| |||||  ||||||||||||| ||||||| |  |||||||||||||    
T  31264039 ttcaaataggttctttttctttgacagaattcccaagttagtactttaagtttcaaa 31264095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 91 - 235
Target Start/End: Complemental strand, 31264280 - 31264125
Alignment:
Q  91 tccttttagtttgacaaaatttctaagtta--gtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||||| |||||| ||||||  || ||||||||||| ||||||||||||  ||||||||||||||||||||||  ||||||| | |||||    
T  31264280 tccttttagtttgacagaatttccaagttatagtactttaagtttcgaaagtttcaattaagtccttttagtttgacagaatttccaagttagttattta 31264181  T
Q  189 agttt---------caaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    |||||         ||||||| || |||||||||||||||||||||||||| ||||    
T  31264180 agtttcaaaagtttcaaataggtccttttagttgataaactatttcaccgtcaccc 31264125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 91 - 197
Target Start/End: Original strand, 34336039 - 34336145
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaag 190  Q
    |||||||||||||| |||||||  || ||||||||||||||||  ||||||||||||  ||| ||||||||||||||||||| ||||||| || ||||||    
T  34336039 tccttttagtttgataaaattttcaaattagtcctttaagttttgaaagtttcaattatgtcattttagtttgacagaattcccaagttagtcctttaag 34336138  T
Q  191 tttcaaa 197  Q
    |||||||    
T  34336139 tttcaaa 34336145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 233
Target Start/End: Original strand, 19080631 - 19080784
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||| |||||||| |||| |||| || | ||| ||||||||||||  |||||||||||| |||| |||||||||||||||||| ||||||||  ||||||    
T  19080631 ggtcattttagttcgacagaattccttaattaatcctttaagttttgaaagtttcaattaggtcattttagtttgacagaattttcaagttagacattta 19080730  T
Q  189 agtttcaa---------atagatcattttagttgataaactatttcaccgttac 233  Q
    ||||||||         |||| || |||||||||||||||||||||||||||||    
T  19080731 agtttcaaaagtttcatataggtccttttagttgataaactatttcaccgttac 19080784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 231
Target Start/End: Complemental strand, 20536046 - 20535933
Alignment:
Q  118 ttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaatagatcattttagttgataa 217  Q
    ||||||||||||||| | ||||||| ||||   || ||||||||||||| ||||||||||||| || |||||||||||||||  || | |||||||||||    
T  20536046 ttagtcctttaagttacgaaagttttaattatatcattttagtttgacataattctcaagttagtcttttaagtttcaaataagtcttgttagttgataa 20535947  T
Q  218 actatttcaccgtt 231  Q
    ||||||||||||||    
T  20535946 actatttcaccgtt 20535933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 150 - 230
Target Start/End: Original strand, 21813209 - 21813289
Alignment:
Q  150 gtccttttagtttgacagaattctcaagttaatcatttaagtttcaaatagatcattttagttgataaactatttcaccgt 230  Q
    ||||||||||||||| ||||||||||||||| || ||||||||||||| || || ||||||||||||||||||||||||||    
T  21813209 gtccttttagtttgatagaattctcaagttagtcctttaagtttcaaaaaggtccttttagttgataaactatttcaccgt 21813289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 41 - 197
Target Start/End: Complemental strand, 34336383 - 34336227
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    ||||||||||||  || |||||| ||| | || | | ||| ||| ||| ||||||||| ||||||||||||   || ||||| |||||| ||||||||||    
T  34336383 ttgacagaattctcaaattagtcctttaaatttcgaaagtttcagttaagtccttttaatttgacaaaattctcaaattagttctttaaatttcaaaagt 34336284  T
Q  141 ttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    ||||| |  |||||| ||||||||||||||| ||||||||||| |||||||||||||    
T  34336283 ttcaaataagtccttgtagtttgacagaattttcaagttaatcttttaagtttcaaa 34336227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 34429683 - 34429791
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||||||| ||||   ||||||||||||||| |||| ||| |||||||| |||||||||| ||||| ||||||  |||||||||| ||||    
T  34429683 ggtccttttagtttgacagaattctcaagttagtcctttaaatttcgaaaatttcaattaggtccttttaatttgaaagaatttccaagttaatccttta 34429782  T
Q  189 agtttcaaa 197  Q
    |||||||||    
T  34429783 agtttcaaa 34429791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 11871872 - 11871764
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||||||| |||||| |||  ||||| ||||||||  ||| ||||||||  ||||| ||||||||||||||||||| ||||| || ||||    
T  11871872 ggtccttttagtttgacagaatttccaagccagtccgttaagttttgaaactttcaattatgtcctcttagtttgacagaattctcgagttagtccttta 11871773  T
Q  189 agtttcaaa 197  Q
    |||||||||    
T  11871772 agtttcaaa 11871764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 246 - 338
Target Start/End: Original strand, 19080823 - 19080915
Alignment:
Q  246 ccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    |||||||||||||||| || |||||||| ||||||||||||||||| || ||||||||| |||| |||||||| |||||||| ||||| ||||    
T  19080823 ccgttaagttgttgacatggatcaaaatactgtcttttaaaagctcgagggtgtcaaaatgctatgtttaatgatcacaaatgatcatttata 19080915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 243 - 338
Target Start/End: Complemental strand, 20535892 - 20535797
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    ||||||||||||| |||||||| |||||||||  | ||||||||||||| || |||| ||||| ||||||||||||||||||||| ||||| ||||    
T  20535892 tagccgttaagttattgacttggatcaaaatgtagccttttaaaagctcgagggtgttaaaacactacgtttaatggtcacaaataatcatttata 20535797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 82 - 161
Target Start/End: Complemental strand, 31264227 - 31264148
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    ||||||| ||||||||||||||||| |||||| ||||||||  ||||||||||||||||||||| | |||||||||||||    
T  31264227 tcaattaagtccttttagtttgacagaatttccaagttagttatttaagtttcaaaagtttcaaataggtccttttagtt 31264148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 95 - 212
Target Start/End: Original strand, 37542956 - 37543072
Alignment:
Q  95 tttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    |||||||||||| || ||| ||||||||| |||||||||| ||||||| ||||  ||| ||||||||||||| ||||  ||||||| || ||||||||||    
T  37542956 tttagtttgacagaacttc-aagttagtcttttaagtttcgaaagttttaattaagtcattttagtttgacataatttccaagttagtcctttaagtttc 37543054  T
Q  195 aaatagatcattttagtt 212  Q
    ||| || |||||||||||    
T  37543055 aaacaggtcattttagtt 37543072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 243 - 327
Target Start/End: Original strand, 20535634 - 20535718
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaat 327  Q
    |||||||||||||||||||||| ||||||| | || ||||||||||||| | |||||||||| | |||||||||| |||||||||    
T  20535634 tagccgttaagttgttgacttggatcaaaacgttgccttttaaaagctcaaaagtgtcaaaatgttacgtttaatcgtcacaaat 20535718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 89 - 161
Target Start/End: Complemental strand, 42117268 - 42117196
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    ||||||||||||||| || || |||||||||||||||||||||||||||||||| || | |||||||||||||    
T  42117268 ggtccttttagtttgtcagaaattctaagttagtcctttaagtttcaaaagttttaaataggtccttttagtt 42117196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 137
Target Start/End: Original strand, 5116900 - 5116955
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaa 137  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  5116900 tcaattaggtccttttagtttgacaaaatttttaaattagtcctttaagtttcaaa 5116955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 84 - 147
Target Start/End: Complemental strand, 16781115 - 16781052
Alignment:
Q  84 aattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatt 147  Q
    ||||||||||||||||||||||||||||   ||||||||||||||| |||||||||||||||||    
T  16781115 aattaggtccttttagtttgacaaaattcacaagttagtcctttaaatttcaaaagtttcaatt 16781052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 145
Target Start/End: Complemental strand, 27893629 - 27893566
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    |||||||||| |||||||||||||| |||| | |||||||||||||||||||||||||||||||    
T  27893629 tcaattaggttcttttagtttgacagaattcccaagttagtcctttaagtttcaaaagtttcaa 27893566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 161
Target Start/End: Complemental strand, 36196572 - 36196493
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    ||||||||||| ||||||||||||| |||||| ||||||||| ||| ||||||||||||||||| | |||| ||||||||    
T  36196572 tcaattaggtctttttagtttgacagaatttccaagttagtcatttgagtttcaaaagtttcaaataggtcattttagtt 36196493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 247 - 333
Target Start/End: Complemental strand, 11871679 - 11871593
Alignment:
Q  247 cgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    |||||| ||||||||||  ||||||||| || |||||||||||| ||| ||||||||||| |||||||||| ||||||||| |||||    
T  11871679 cgttaaattgttgactttgatcaaaatggtggcttttaaaagcttcagggtgtcaaaacgttacgtttaatcgtcacaaatgatcat 11871593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 16781171 - 16781062
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtccttt-aagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattt 187  Q
    |||| ||||||||||||| ||||   ||||||||||||| ||||||  ||||||| |||| |||||||||||||||||| ||||| ||||||| || |||    
T  16781171 ggtcattttagtttgacagaattctcaagttagtccttttaagttttgaaagttttaattaggtccttttagtttgacaaaattcacaagttagtccttt 16781072  T
Q  188 aagtttcaaa 197  Q
    || |||||||    
T  16781071 aaatttcaaa 16781062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 85 - 197
Target Start/End: Complemental strand, 39376472 - 39376360
Alignment:
Q  85 attaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatca 184  Q
    |||||||| |||||  |||||| |||||| ||||||||||||||||||||||| ||||||| | |||| ||||| ||||||| | |||  |||||| ||     
T  39376472 attaggtctttttaaattgacagaatttccaagttagtcctttaagtttcaaacgtttcaaataggtctttttaatttgacaaatttcctaagttagtcc 39376373  T
Q  185 tttaagtttcaaa 197  Q
    |||| ||||||||    
T  39376372 tttatgtttcaaa 39376360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 118 - 197
Target Start/End: Original strand, 8260416 - 8260495
Alignment:
Q  118 ttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    ||||||||||||||||| |||||||||||| | || ||||||||||||||| ||||||| ||| || ||||| |||||||    
T  8260416 ttagtcctttaagtttcgaaagtttcaattagatcattttagtttgacagagttctcaaattactcttttaattttcaaa 8260495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 82 - 161
Target Start/End: Original strand, 19080684 - 19080763
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    ||||||||||| ||||||||||||| |||||  ||||||| | ||||||||||||||||||||  | |||||||||||||    
T  19080684 tcaattaggtcattttagtttgacagaattttcaagttagacatttaagtttcaaaagtttcatataggtccttttagtt 19080763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 82 - 161
Target Start/End: Original strand, 34336090 - 34336169
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    ||||||| ||| ||||||||||||| |||| | |||||||||||||||||||||||||||| || | |||| ||||||||    
T  34336090 tcaattatgtcattttagtttgacagaattcccaagttagtcctttaagtttcaaaagttttaaataggtctttttagtt 34336169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 333
Target Start/End: Complemental strand, 27893493 - 27893403
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    |||||||||| ||||||||||| ||||||||| || | |||||||| || ||  |||||||| ||||||| |||||||||||||| |||||    
T  27893493 tagccgttaaattgttgacttggatcaaaatgttgccatttaaaaggtcgaggatgtcaaaatgctacgtgtaatggtcacaaatgatcat 27893403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 37543197 - 37543119
Alignment:
Q  93 cttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaatt 171  Q
    |||||||||||||| |||||  ||||||||| |||||||||  ||||||||||||  ||||||||||||||||| ||||    
T  37543197 cttttagtttgacagaattttcaagttagtcttttaagttttgaaagtttcaattaagtccttttagtttgacataatt 37543119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 228
Target Start/End: Original strand, 39376181 - 39376314
Alignment:
Q  94 ttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagttt 193  Q
    ||||||||| ||| ||||   ||||| |||||| ||||||  |||||||||| | | |||||||||||| || ||||||  |||||| || ||||| |||    
T  39376181 ttttagtttaacataattctcaagttggtccttcaagttttgaaagtttcaactagatccttttagttttacggaattcctaagttagtc-tttaaattt 39376279  T
Q  194 caaatagatcattttagttgataaactatttcacc 228  Q
    ||||||  || ||||||||||||||||||||||||    
T  39376280 caaataagtctttttagttgataaactatttcacc 39376314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 27893034 - 27893082
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||    
T  27893034 tttggtccttttagtttgacagaattctcaagttaatcctttaaatttc 27893082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 145
Target Start/End: Original strand, 30907148 - 30907252
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    |||||| |||||  || |||||| ||| |||| ||| ||| |||| ||| ||||||||| |||||| |||| | ||||||||| ||||||||||||||||    
T  30907148 ttgacataattctcaagttagtcctttaagtttcaaaagtttcaaatagatccttttagattgacataattcccaagttagtcatttaagtttcaaaagt 30907247  T
Q  141 ttcaa 145  Q
    |||||    
T  30907248 ttcaa 30907252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 34336395 - 34336287
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||||||| ||||   || |||||||||||| |||| ||||||||| ||  ||||||||| ||||||| ||||||||| ||| |  ||||    
T  34336395 ggtccttttagtttgacagaattctcaaattagtcctttaaatttcgaaagtttcagttaagtccttttaatttgacaaaattctcaaattagttcttta 34336296  T
Q  189 agtttcaaa 197  Q
    | |||||||    
T  34336295 aatttcaaa 34336287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 58 - 183
Target Start/End: Original strand, 37542978 - 37543094
Alignment:
Q  58 ttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtcctttt 157  Q
    |||||||||| |||| | | ||| | ||||| ||| ||||||||||||| |||||| |||||||||||||||||||||||     ||    |||| ||||    
T  37542978 ttagtcttttaagtttcgaaagttttaattaagtcattttagtttgacataatttccaagttagtcctttaagtttcaaa-----ca----ggtcatttt 37543068  T
Q  158 agtttgacagaattctcaagttaatc 183  Q
    ||||||||||||||| ||||||||||    
T  37543069 agtttgacagaattcccaagttaatc 37543094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 145
Target Start/End: Complemental strand, 39376456 - 39376352
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    ||||||||||| | || |||||| ||| |||| |||  || |||| |||||| ||||| ||||||||| || |||||||||||||||| |||||||||||    
T  39376456 ttgacagaatttccaagttagtcctttaagtttcaaacgtttcaaataggtctttttaatttgacaaatttcctaagttagtcctttatgtttcaaaagt 39376357  T
Q  141 ttcaa 145  Q
     ||||    
T  39376356 ctcaa 39376352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 137 - 212
Target Start/End: Original strand, 5116895 - 5116970
Alignment:
Q  137 aagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaatagatcattttagtt 212  Q
    ||||||||||| |||||||||||||||||| |||| | || ||| || |||||||||||||||  |||||||||||    
T  5116895 aagtttcaattaggtccttttagtttgacaaaatttttaaattagtcctttaagtttcaaataagtcattttagtt 5116970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 190 - 232
Target Start/End: Original strand, 20535555 - 20535597
Alignment:
Q  190 gtttcaaatagatcattttagttgataaactatttcaccgtta 232  Q
    ||||||||||| |||||||||||||||||||||||||||||||    
T  20535555 gtttcaaataggtcattttagttgataaactatttcaccgtta 20535597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 145
Target Start/End: Complemental strand, 30907424 - 30907319
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtcctttta-gtttgacaaaatttctaagttagtcctttaagtttcaaaag 139  Q
    |||||| ||||  ||| |||||| ||| |||| | | ||| ||||||||||||||||| |||||| | ||||   |||||||||||||||||||||||||    
T  30907424 ttgacaaaatttataagttagtcatttaagtttcgaaagtttcaattaggtccttttaagtttgaaagaattctcaagttagtcctttaagtttcaaaag 30907325  T
Q  140 tttcaa 145  Q
    ||||||    
T  30907324 tttcaa 30907319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 82 - 139
Target Start/End: Original strand, 34429736 - 34429793
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaag 139  Q
    ||||||||||||||||| ||||| | |||||| |||||| ||||||||||||||||||    
T  34429736 tcaattaggtccttttaatttgaaagaatttccaagttaatcctttaagtttcaaaag 34429793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 141 - 232
Target Start/End: Original strand, 15506040 - 15506140
Alignment:
Q  141 ttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaat---------agatcattttagttgataaactatttcaccgtt 231  Q
    ||||||| |||||||||||||||||| ||||||||| |||||| ||||||||| |||          || |||||||| |||||||||||||||||||||    
T  15506040 ttcaattaggtccttttagtttgacataattctcaaattaatcctttaagtttaaaaagttttaaagaggtcattttaattgataaactatttcaccgtt 15506139  T
Q  232 a 232  Q
    |    
T  15506140 a 15506140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 27893685 - 27893637
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    ||||||||||||||||||||| ||||||||||||| || ||||||||||    
T  27893685 tttggtccttttagtttgacaaaattctcaagttagtcctttaagtttc 27893637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 249 - 333
Target Start/End: Complemental strand, 39301759 - 39301675
Alignment:
Q  249 ttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    |||| ||| ||||||| ||||||| | ||||||||||||||||||  ||||||||||  |||||||||| |||| |||| |||||    
T  39301759 ttaaattggtgacttggatcaaaacgttgtcttttaaaagctccatggtgtcaaaactttacgtttaattgtcagaaatgatcat 39301675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 194
Target Start/End: Original strand, 34429681 - 34429728
Alignment:
Q  147 ttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    |||||||||||||||||||||||||||||||||| || ||||| ||||    
T  34429681 ttggtccttttagtttgacagaattctcaagttagtcctttaaatttc 34429728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 197
Target Start/End: Original strand, 32341450 - 32341564
Alignment:
Q  84 aattaggtccttttagtttgacaaaatttctaagttagtccttt-aagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaat 182  Q
    ||||| || |||||||||||| | |||||  || |||||||||| |||||| |||| |||||| | ||| |||||| ||||||||||||||||| ||| |    
T  32341450 aattaagttcttttagtttgaaagaattttcaaattagtccttttaagttttaaaaatttcaaataggttcttttattttgacagaattctcaatttagt 32341549  T
Q  183 catttaagtttcaaa 197  Q
    | | ||| |||||||    
T  32341550 cctataaatttcaaa 32341564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 197
Target Start/End: Complemental strand, 39376522 - 39376420
Alignment:
Q  95 tttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    |||||||| ||| |||||| |||||| | | ||||||||| |||||||  ||| |||| |||||  |||||||||||  ||||||| || ||||||||||    
T  39376522 tttagtttcacagaatttcgaagttaattcattaagtttcgaaagttttgattaggtctttttaaattgacagaatttccaagttagtcctttaagtttc 39376423  T
Q  195 aaa 197  Q
    |||    
T  39376422 aaa 39376420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 130
Target Start/End: Complemental strand, 37543189 - 37543100
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaag 130  Q
    |||||||||||   || |||||||||| ||||   | ||| ||||||| ||||||||||||||||| |||||| ||| ||||||||||||    
T  37543189 ttgacagaattttcaagttagtcttttaagttttgaaagtttcaattaagtccttttagtttgacataatttccaaggtagtcctttaag 37543100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 142
Target Start/End: Complemental strand, 11871819 - 11871759
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagttt 142  Q
    ||||||| ||||| ||||||||||| ||||    |||||||||||||||||||||||||||    
T  11871819 tcaattatgtcctcttagtttgacagaattctcgagttagtcctttaagtttcaaaagttt 11871759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 82 - 142
Target Start/End: Original strand, 15506041 - 15506101
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagttt 142  Q
    ||||||||||||||||||||||||| ||||   || ||| |||||||||||| ||||||||    
T  15506041 tcaattaggtccttttagtttgacataattctcaaattaatcctttaagtttaaaaagttt 15506101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 31263924 - 31263972
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    ||||||| ||||||||||||||||||  |||||||||| ||||||||||    
T  31263924 tttggtctttttagtttgacagaatttccaagttaatcctttaagtttc 31263972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 34336398 - 34336350
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    ||||||||||||||||||||||||||||||| ||| || ||||| ||||    
T  34336398 tttggtccttttagtttgacagaattctcaaattagtcctttaaatttc 34336350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 39301512 - 39301588
Alignment:
Q  248 gttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcaca 324  Q
    ||||||||||||||||  ||||||||| |   ||| ||||| |  || |||||||||||||||||||||||||||||    
T  39301512 gttaagttgttgacttagatcaaaatgtttcatttaaaaagtttgagggtgtcaaaacgctacgtttaatggtcaca 39301588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 41265369 - 41265321
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    |||| |||||||||||||| |||||| |||||||| |||||||||||||    
T  41265369 tttgatccttttagtttgagagaattatcaagttagtcatttaagtttc 41265321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 91 - 130
Target Start/End: Complemental strand, 13315847 - 13315808
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaag 130  Q
    |||||||||||||||| |||||| ||||||||||||||||    
T  13315847 tccttttagtttgacataatttccaagttagtcctttaag 13315808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 193
Target Start/End: Complemental strand, 37543204 - 37543157
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagttt 193  Q
    |||||| ||||||||||||||||||| |||||||| || |||||||||    
T  37543204 tttggttcttttagtttgacagaattttcaagttagtcttttaagttt 37543157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 235
Target Start/End: Complemental strand, 42117220 - 42117173
Alignment:
Q  188 aagtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    |||||| |||||| || ||||||||||||||| |||||||||||||||    
T  42117220 aagttttaaataggtccttttagttgataaacaatttcaccgttaccc 42117173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 146 - 180
Target Start/End: Complemental strand, 16781174 - 16781140
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagtta 180  Q
    ||||||| |||||||||||||||||||||||||||    
T  16781174 tttggtcattttagtttgacagaattctcaagtta 16781140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 147 - 177
Target Start/End: Original strand, 34425107 - 34425137
Alignment:
Q  147 ttggtccttttagtttgacagaattctcaag 177  Q
    |||||||||||||||||||||||||||||||    
T  34425107 ttggtccttttagtttgacagaattctcaag 34425137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 162
Target Start/End: Complemental strand, 11949703 - 11949662
Alignment:
Q  121 gtcctttaagtttcaaaagtttcaatttggtccttttagttt 162  Q
    |||||||||||||||||||||||||  ||||||||| |||||    
T  11949703 gtcctttaagtttcaaaagtttcaaagtggtcctttaagttt 11949662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 94 - 163
Target Start/End: Complemental strand, 19081124 - 19081055
Alignment:
Q  94 ttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttg 163  Q
    ||||||||||||| ||||   || |||||| |||||||||| |||||||||||| |||  ||||||||||    
T  19081124 ttttagtttgacagaattctcaaattagtcttttaagtttcgaaagtttcaattaggtgtttttagtttg 19081055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 198
Target Start/End: Original strand, 16780938 - 16780990
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaat 198  Q
    |||| |||||||| || ||||||||| |||||||| || ||||||||||||||    
T  16780938 tttgatccttttaattcgacagaattttcaagttagtcctttaagtttcaaat 16780990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 194
Target Start/End: Complemental strand, 19081124 - 19081084
Alignment:
Q  154 ttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    ||||||||||||||||||||||| ||| || ||||||||||    
T  19081124 ttttagtttgacagaattctcaaattagtcttttaagtttc 19081084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 138
Target Start/End: Original strand, 21813209 - 21813257
Alignment:
Q  90 gtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaa 138  Q
    ||||||||||||||| | ||||   ||||||||||||||||||||||||    
T  21813209 gtccttttagtttgatagaattctcaagttagtcctttaagtttcaaaa 21813257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 194
Target Start/End: Original strand, 32341392 - 32341440
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    |||||| ||||||||||||||| ||||| ||||||||| ||||| ||||    
T  32341392 tttggttcttttagtttgacaggattcttaagttaatcctttaaatttc 32341440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 80; Significance: 2e-37; HSPs: 6)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 28547 - 28702
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattt- 187  Q
    |||||||||| ||||||| |||||| |||||||||||||||||||  |||||||||||| |||||||||| ||||||||||||||||||||| || |||     
T  28547 ggtccttttaatttgacagaatttccaagttagtcctttaagttttgaaagtttcaattaggtccttttaatttgacagaattctcaagttagtccttta 28646  T
Q  188 --------aagtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
            ||||||||||||| |||||||||||||||||||||||||| |||||||    
T  28647 aaattcaaaagtttcaaataggtcattttagttgataaactatttcactgttaccc 28702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 151 - 233
Target Start/End: Complemental strand, 29108 - 29027
Alignment:
Q  151 tccttttagtttgacagaattctcaagttaatcatttaagtttcaaatagatcattttagttgataaactatttcaccgttac 233  Q
    ||||||||||||||| ||||||  |||||| || |||||||||||||||  ||||||||||||||||| |||||||| |||||    
T  29108 tccttttagtttgaccgaattcctaagttagtc-tttaagtttcaaatatgtcattttagttgataaattatttcactgttac 29027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 161
Target Start/End: Original strand, 28559 - 28679
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    ||||||||||| | || |||||| ||| ||||   | ||| ||||||||||||||||| ||||||| ||||   |||||||||||||||  |||||||||    
T  28559 ttgacagaatttccaagttagtcctttaagttttgaaagtttcaattaggtccttttaatttgacagaattctcaagttagtcctttaaaattcaaaagt 28658  T
Q  141 ttcaatttggtccttttagtt 161  Q
    ||||| | |||| ||||||||    
T  28659 ttcaaataggtcattttagtt 28679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 326
Target Start/End: Complemental strand, 28991 - 28909
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaa 326  Q
    |||| ||||||||||||| ||| ||||||| | || |||||||||||| | | ||||||||||| ||||||||||| |||||||    
T  28991 tagcggttaagttgttgatttggatcaaaacgatgccttttaaaagcttc-gggtgtcaaaacgttacgtttaatgatcacaaa 28909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 291
Target Start/End: Original strand, 28736 - 28784
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctc 291  Q
    ||||| |||||||||||||||| |||| |||| || |||||||||||||    
T  28736 tagccattaagttgttgacttggatcacaatgttgccttttaaaagctc 28784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 93 - 137
Target Start/End: Complemental strand, 29157 - 29113
Alignment:
Q  93 cttttagtttgacaaaatttctaagttagtcctttaagtttcaaa 137  Q
    |||||||||||||| |||| |||||||||||||| |||||| |||    
T  29157 cttttagtttgacataattcctaagttagtccttcaagttttaaa 29113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 76; Significance: 4e-35; HSPs: 6)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 48 - 179
Target Start/End: Complemental strand, 124459 - 124328
Alignment:
Q  48 aattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatt 147  Q
    |||||| || |||||| ||| |||| | | ||| ||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||||||||||||    
T  124459 aattcccaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaatttccaagttagtcctttaagtttcgaaagtttcaatt 124360  T
Q  148 tggtccttttagtttgacagaattctcaagtt 179  Q
     |||| ||||||||||||||||||| ||||||    
T  124359 aggtctttttagtttgacagaattcccaagtt 124328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 124146 - 124253
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||   ||| |||||||||||||||||||| ||| ||| || ||||    
T  124146 ggtccttttagtttgacaaaattcccaagttagtcctttaagtttcaaaagtttcaaacaggtgcttttagtttgacagaattcccaatttagtc-ttta 124244  T
Q  189 agtttcaaa 197  Q
    |||||||||    
T  124245 agtttcaaa 124253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 89 - 194
Target Start/End: Complemental strand, 124478 - 124373
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    ||||||||| |||||| | |||| | |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||  ||||||| || ||||    
T  124478 ggtcctttttgtttgatataattcccaagttagtcctttaagtttcgaaagtttcaattaggtccttttagtttgacagaatttccaagttagtccttta 124379  T
Q  189 agtttc 194  Q
    ||||||    
T  124378 agtttc 124373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 41 - 145
Target Start/End: Original strand, 124158 - 124261
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    |||||| |||||| || |||||| ||| |||| ||| ||| ||||  |||| |||||||||||||| |||| | || ||||| |||||||||||||||||    
T  124158 ttgacaaaattcccaagttagtcctttaagtttcaaaagtttcaaacaggtgcttttagtttgacagaattcccaatttagt-ctttaagtttcaaaagt 124256  T
Q  141 ttcaa 145  Q
    |||||    
T  124257 ttcaa 124261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 146 - 197
Target Start/End: Original strand, 124143 - 124194
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    ||||||||||||||||||||| ||||| ||||||| || |||||||||||||    
T  124143 tttggtccttttagtttgacaaaattcccaagttagtcctttaagtttcaaa 124194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 132
Target Start/End: Complemental strand, 124406 - 124315
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtt 132  Q
    ||||||||||| | || |||||| ||| |||| | | ||| ||||||||||| ||||||||||||| |||| | ||||| ||||||| ||||    
T  124406 ttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtctttttagtttgacagaattcccaagttggtccttttagtt 124315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746 (Bit Score: 72; Significance: 1e-32; HSPs: 6)
Name: scaffold0746
Description:

Target: scaffold0746; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 656 - 501
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattt- 187  Q
    |||||||||| ||||| | |||||  |||||||||||||||||||  |||||||||||| |||||||||| ||||||||||||||||||||| || |||     
T  656 ggtccttttaatttgatagaattttcaagttagtcctttaagttttgaaagtttcaattaggtccttttaatttgacagaattctcaagttagtccttta 557  T
Q  188 --------aagtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
            ||||||||||||| |||||||||||||||||||||||||| |||||||    
T  556 aatttcaaaagtttcaaataggtcattttagttgataaactatttcactgttaccc 501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 89 - 233
Target Start/End: Original strand, 24 - 176
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattt- 187  Q
    |||||||||||||||||| ||||   |||||||||||| ||||||||||||||| || |   ||||||||||||||| ||||||  |||||| | ||||     
T  24 ggtccttttagtttgacataattctcaagttagtccttcaagtttcaaaagttttaaatatatccttttagtttgaccgaattcctaagttagt-attta 122  T
Q  188 --------aagtttcaaatagatcattttagttgataaactatttcaccgttac 233  Q
            ||||||||||||  |||||||||||||||||||||||||| |||||    
T  123 agtttgaaaagtttcaaatatgtcattttagttgataaactatttcactgttac 176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 82 - 161
Target Start/End: Complemental strand, 603 - 524
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    ||||||||||||||||| ||||||| ||||   ||||||||||||||| ||||||||||||||| | |||| ||||||||    
T  603 tcaattaggtccttttaatttgacagaattctcaagttagtcctttaaatttcaaaagtttcaaataggtcattttagtt 524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746; HSP #4
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 20 - 72
Alignment:
Q  145 atttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    |||||||||||||||||||||| ||||||||||||| || || ||||||||||    
T  20 atttggtccttttagtttgacataattctcaagttagtccttcaagtttcaaa 72  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 243 - 293
Target Start/End: Complemental strand, 467 - 417
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctcca 293  Q
    |||||||||||||||||||||| |||| |||| || |||||||||||||||    
T  467 tagccgttaagttgttgacttggatcacaatgttgccttttaaaagctcca 417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0746; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 248 - 326
Target Start/End: Original strand, 217 - 294
Alignment:
Q  248 gttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaa 326  Q
    |||||||||||||  || ||||||  | || |||||||||||| | | ||||||||||| |||||||||||||||||||    
T  217 gttaagttgttgatgtggatcaaagcgatgccttttaaaagcttcgg-gtgtcaaaacgttacgtttaatggtcacaaa 294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 6e-31; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 137 - 229
Target Start/End: Complemental strand, 4276689 - 4276597
Alignment:
Q  137 aagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaatagatcattttagttgataaactatttcaccg 229  Q
    ||||||||||| | || ||||||||||||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  4276689 aagtttcaattagatcattttagtttgacagaattcccaagttagtcctttaagtttcaaatagatcattttagttgataaactatttcaccg 4276597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 89 - 197
Target Start/End: Complemental strand, 31247765 - 31247657
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||| ||||||| |||||| |||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||| ||||||| |  ||||    
T  31247765 ggtccttttaatttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtccttttagttggacagaattcccaagttagtgcttta 31247666  T
Q  189 agtttcaaa 197  Q
    |||||||||    
T  31247665 agtttcaaa 31247657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 89 - 232
Target Start/End: Complemental strand, 3088214 - 3088071
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||||||| |||||  |||||| | |||||| |||| ||||||||||||  |||||||||||||||||  |||  | ||||| || ||||    
T  3088214 ggtccttttagtttgacagaattttcaagttaatgctttaaatttcgaaagtttcaattatgtccttttagtttgacatgatttcctagttagtccttta 3088115  T
Q  189 agtttcaaatagatcattttagttgataaactatttcaccgtta 232  Q
    |||||||||||| || ||||| ||||||||||||||||||||||    
T  3088114 agtttcaaataggtccttttaattgataaactatttcaccgtta 3088071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 91 - 227
Target Start/End: Original strand, 50530251 - 50530386
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaag 190  Q
    |||||||||||||||| |||||  || |||||| |||||||||||||||| | |||| |||| ||||||||||||||||||||||| ||  ||  |||||    
T  50530251 tccttttagtttgacagaattttcaacttagtcttttaagtttcaaaagtattaattaggtcattttagtttgacagaattctcaaatttgtc-cttaag 50530349  T
Q  191 tttcaaatagatcattttagttgataaactatttcac 227  Q
    ||| |||||| |||||||| |||||||||||||||||    
T  50530350 ttttaaataggtcattttaattgataaactatttcac 50530386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 243 - 338
Target Start/End: Original strand, 21376758 - 21376853
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    |||||||||||||||||||||| || |||||| |||||||||||||||| |  |||||||||||||||||||||||||||||||| ||||| ||||    
T  21376758 tagccgttaagttgttgacttgaattaaaatgttgtcttttaaaagctcgatggtgtcaaaacgctacgtttaatggtcacaaatgatcatttata 21376853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 243 - 338
Target Start/End: Complemental strand, 35555915 - 35555820
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    |||||||||||||||||||||| |||||||||||   |||||||||||| || ||||||||||||||||||||||| |||||||||||||| ||||    
T  35555915 tagccgttaagttgttgacttggatcaaaatgcttcattttaaaagctcaagggtgtcaaaacgctacgtttaatgatcacaaattatcatttata 35555820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 146 - 232
Target Start/End: Complemental strand, 35556038 - 35555952
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaatagatcattttagttgataaactatttcaccgtta 232  Q
    |||||||||||||||||| || ||||| |||||||||| |||||||||||||||| ||||||||||| |||||||||||||||||||    
T  35556038 tttggtccttttagtttggcaaaattcccaagttaatcctttaagtttcaaataggtcattttagttaataaactatttcaccgtta 35555952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 146 - 235
Target Start/End: Original strand, 14629285 - 14629374
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    ||||||||||||| ||||||||||||| ||||||| || |||||||||||||||| |  |||||||||||||| ||||||||||||||||    
T  14629285 tttggtccttttactttgacagaattcccaagttagtcctttaagtttcaaataggttcttttagttgataaattatttcaccgttaccc 14629374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 89 - 235
Target Start/End: Complemental strand, 21377120 - 21376985
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    |||||||||||||||||| |||||| |||||| | |||||| |||| |||||||||||| |||| ||||||||||||| |||           || ||||    
T  21377120 ggtccttttagtttgacagaatttccaagttaatactttaaatttcgaaagtttcaattaggtcattttagtttgacataat-----------tccttta 21377032  T
Q  189 agtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    |||||||||||| || |||||||| ||||||||||||||||||||||    
T  21377031 agtttcaaataggtccttttagtttataaactatttcaccgttaccc 21376985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 4276138 - 4276293
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattt- 187  Q
    ||||||||||||||||||| |||| ||||||||| ||||||||||  ||||||||||||  ||| ||||||||||||| |||| | | |||| |  |||     
T  4276138 ggtccttttagtttgacaatatttttaagttagttctttaagttttgaaagtttcaattaagtctttttagtttgacataatttttatgttagttcttta 4276237  T
Q  188 --------aagtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
            ||||||||||||| |||||||||||||||||||||||||| |||||||    
T  4276238 agtttcaaaagtttcaaatagttcattttagttgataaactatttcactgttaccc 4276293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 243 - 338
Target Start/End: Complemental strand, 14629601 - 14629506
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    ||||||||||||| |||||||| |||||||||||| ||||||||||||| || |||||||||  ||| ||||||||||||||||| ||||| ||||    
T  14629601 tagccgttaagttattgacttggatcaaaatgctgccttttaaaagctcgagggtgtcaaaaaactatgtttaatggtcacaaatgatcatttata 14629506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 89 - 232
Target Start/End: Original strand, 35555529 - 35555682
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttag-tcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatc---- 183  Q
    ||||||||||  |||||| ||||   ||||||| || |||||||||||||||||||||||   || |||||||||||||||||| |||||||| ||        
T  35555529 ggtccttttaaattgacagaattcacaagttagatcttttaagtttcaaaagtttcaattaaatcattttagtttgacagaattatcaagttagtccatt 35555628  T
Q  184 --attt---aagtttcaaatagatcattttagttgataaactatttcaccgtta 232  Q
      ||||   |||||||||||| ||||||||||||||||||||||||||||||||    
T  35555629 aaattttgaaagtttcaaataaatcattttagttgataaactatttcaccgtta 35555682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 247 - 338
Target Start/End: Original strand, 53783071 - 53783162
Alignment:
Q  247 cgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    |||||||||||||| ||| ||||||||||||  |||||||||  | || |||||||||||||||||||||||||||||||| ||||| ||||    
T  53783071 cgttaagttgttgatttggatcaaaatgctgcattttaaaagaccgagggtgtcaaaacgctacgtttaatggtcacaaatgatcatttata 53783162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 243 - 338
Target Start/End: Original strand, 4276327 - 4276423
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtc-aaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    |||| ||||||||||||| ||  ||||||||| || ||||||||||||| || ||||| ||||||||||||||||||||||||||| ||||| ||||    
T  4276327 tagcggttaagttgttgatttagatcaaaatggtgccttttaaaagctcgagggtgtcaaaaacgctacgtttaatggtcacaaataatcatttata 4276423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 41 - 145
Target Start/End: Complemental strand, 31247753 - 31247649
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    ||||||||||| | || |||||| ||| |||| | | ||| |||||||||||||||||||| |||| |||| | |||||||| |||||||||||||||||    
T  31247753 ttgacagaatttccaagttagtcctttaagtttcgaaagtttcaattaggtccttttagttggacagaattcccaagttagtgctttaagtttcaaaagt 31247654  T
Q  141 ttcaa 145  Q
    |||||    
T  31247653 ttcaa 31247649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 243 - 338
Target Start/End: Original strand, 24707599 - 24707694
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcatctata 338  Q
    |||||||||| ||||||| ||  ||||||||| || |||| |||||||| || ||||||||||||||| |||||||||||||||| ||||| ||||    
T  24707599 tagccgttaaattgttgatttagatcaaaatgttgcctttaaaaagctcgagggtgtcaaaacgctacatttaatggtcacaaataatcatttata 24707694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 82 - 145
Target Start/End: Complemental strand, 54456863 - 54456800
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    |||| |||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||    
T  54456863 tcaaataggtccttttaatttgacataatttccaagttagtcctttaagtttcaaaagtttcaa 54456800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 243 - 333
Target Start/End: Original strand, 31247318 - 31247408
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    |||||||||||||||||||||| ||||||| | ||||||||||||| ||||  |||||||||   ||||||||||||| |||||| |||||    
T  31247318 tagccgttaagttgttgacttggatcaaaacgttgtcttttaaaagttccatggtgtcaaaatattacgtttaatggttacaaatgatcat 31247408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 90 - 195
Target Start/End: Original strand, 3087086 - 3087190
Alignment:
Q  90 gtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaa 189  Q
    ||||||||| ||||| | |||||  ||||||||| |||||||||||||||||| || |   |||||||||||||||||||||||||||| |||| |||||    
T  3087086 gtccttttaatttgatagaattttcaagttagtc-tttaagtttcaaaagttttaaataaatccttttagtttgacagaattctcaagtaaatcttttaa 3087184  T
Q  190 gtttca 195  Q
     |||||    
T  3087185 atttca 3087190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 82 - 197
Target Start/End: Complemental strand, 54456923 - 54456808
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaa 181  Q
    |||||||| | |||||||||||| | || ||| || ||| ||| |||||| ||||||||||||| | |||||||||| ||||||| ||||  |||||||     
T  54456923 tcaattagattcttttagtttgatagaacttccaaattattcccttaagtatcaaaagtttcaaataggtccttttaatttgacataatttccaagttag 54456824  T
Q  182 tcatttaagtttcaaa 197  Q
    || |||||||||||||    
T  54456823 tcctttaagtttcaaa 54456808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 146 - 212
Target Start/End: Complemental strand, 4276731 - 4276665
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaatagatcattttagtt 212  Q
    |||||| |||||||||||||||||||| ||| | |||| |||||||||||| |||||||||||||||    
T  4276731 tttggtacttttagtttgacagaattcccaaataaatcctttaagtttcaattagatcattttagtt 4276665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 317
Target Start/End: Original strand, 14629407 - 14629481
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaat 317  Q
    |||||||||||||||||| ||| ||||||| |||| ||||||||||||| || ||||||||| | ||||||||||    
T  14629407 tagccgttaagttgttgatttgaatcaaaacgctgccttttaaaagctctagggtgtcaaaatgttacgtttaat 14629481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 82 - 197
Target Start/End: Complemental strand, 5505809 - 5505692
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtccttt-aagtttcaaaagtttcaatttggtccttttag-tttgacagaattctcaagtt 179  Q
    |||||||| ||||||| |||||||| |||||| || |||||||||| ||||||||||||||| || | | ||||||||| ||| ||||||||   |||||    
T  5505809 tcaattagatcctttttgtttgacataatttcaaaattagtccttttaagtttcaaaagttttaaatagatccttttagttttaacagaatttctaagtt 5505710  T
Q  180 aatcatttaagtttcaaa 197  Q
    | || |||||||||||||    
T  5505709 agtcctttaagtttcaaa 5505692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 327
Target Start/End: Original strand, 3087231 - 3087315
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaat 327  Q
    ||||| |||||||||||||||| ||||||| ||||  |||||||| ||| |  ||||||||||| ||||||||||||||| ||||    
T  3087231 tagcctttaagttgttgacttggatcaaaacgctgcattttaaaatctcaaaggtgtcaaaacgttacgtttaatggtcataaat 3087315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 249 - 333
Target Start/End: Complemental strand, 21376946 - 21376862
Alignment:
Q  249 ttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    ||||||||||| |||| ||||||| | |||||||||||||||| || ||| ||||||| || ||||||| ||||||||| |||||    
T  21376946 ttaagttgttgtcttggatcaaaacgttgtcttttaaaagctctagggtgccaaaacgatatgtttaatcgtcacaaatgatcat 21376862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 248 - 332
Target Start/End: Complemental strand, 31247571 - 31247487
Alignment:
Q  248 gttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatca 332  Q
    ||||||||||||||||  |||||||||||| |||||||||||| ||   ||| ||||| ||||||||||| ||||||||| ||||    
T  31247571 gttaagttgttgactttgatcaaaatgctgccttttaaaagcttcaagatgttaaaacactacgtttaattgtcacaaatgatca 31247487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 145
Target Start/End: Original strand, 4276191 - 4276254
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    ||||||| ||| ||||||||||||| ||||| || |||||| ||||||||||||||||||||||    
T  4276191 tcaattaagtctttttagtttgacataatttttatgttagttctttaagtttcaaaagtttcaa 4276254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 236 - 327
Target Start/End: Original strand, 35555712 - 35555805
Alignment:
Q  236 gttggtatagccgttaagttgttgacttgtatcaaaatgct--gtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaat 327  Q
    |||| |||||||||||||||| ||||||  ||||||| |||   |||||||||| |||||| |||| |||||| |||||||||| |||||||||    
T  35555712 gttgatatagccgttaagttgctgacttagatcaaaacgcttcctcttttaaaaactccagggtgttaaaacgttacgtttaatagtcacaaat 35555805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 176
Target Start/End: Original strand, 14964648 - 14964732
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaa 176  Q
    |||||||||||| ||  |||| | ||||||||| |||||||||  ||||||||||||  ||| |||||||||||||||||||||||    
T  14964648 tccttttagtttaacttaattcccaagttagtc-tttaagttttgaaagtttcaattatgtctttttagtttgacagaattctcaa 14964732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 90 - 234
Target Start/End: Original strand, 21376570 - 21376723
Alignment:
Q  90 gtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcatttaa 189  Q
    ||||||||| ||||||  || || |||||||| | ||||| ||| |||||||| ||||  || |||||||||||| |||||| ||| |||  || |||||    
T  21376570 gtccttttaatttgactgaacttttaagttagacttttaaattttaaaagttttaattaagttcttttagtttgatagaattttcaggttggtcctttaa 21376669  T
Q  190 gtttcaaa---------tagatcattttagttgataaactatttcaccgttacc 234  Q
    ||||||||         ||  |||||||||||||||||||||||||||||||||    
T  21376670 gtttcaaaagttttaaatatgtcattttagttgataaactatttcaccgttacc 21376723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 3088161 - 3088106
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaa 137  Q
    ||||||| |||||||||||||||||  |||||  ||||||||||||||||||||||    
T  3088161 tcaattatgtccttttagtttgacatgatttcctagttagtcctttaagtttcaaa 3088106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 137
Target Start/End: Complemental strand, 4276684 - 4276629
Alignment:
Q  82 tcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaa 137  Q
    |||||||| || ||||||||||||| |||| | |||||||||||||||||||||||    
T  4276684 tcaattagatcattttagtttgacagaattcccaagttagtcctttaagtttcaaa 4276629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 150 - 197
Target Start/End: Original strand, 14964737 - 14964784
Alignment:
Q  150 gtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    |||||||||||||||||||||| |||||||| || |||||||||||||    
T  14964737 gtccttttagtttgacagaattttcaagttagtcttttaagtttcaaa 14964784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 31247192 - 31247245
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    |||||||||||||||||||||   ||||||||| |||||||||||||||||||||    
T  31247192 tccttttagtttgacaaaattctcaagttagtc-tttaagtttcaaaagtttcaa 31247245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 137
Target Start/End: Complemental strand, 50530443 - 50530397
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaa 137  Q
    |||||||||||| ||  ||||||||||||||||||||||||||||||    
T  50530443 tccttttagtttcacttaatttctaagttagtcctttaagtttcaaa 50530397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 91 - 145
Target Start/End: Original strand, 54456676 - 54456730
Alignment:
Q  91 tccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaa 145  Q
    |||||||||||||||| |||||| || |||||| |||||||||| ||||||||||    
T  54456676 tccttttagtttgacagaatttcgaaattagtcatttaagtttcgaaagtttcaa 54456730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 3088217 - 3088181
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaat 182  Q
    |||||||||||||||||||||||||| ||||||||||    
T  3088217 tttggtccttttagtttgacagaattttcaagttaat 3088181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 137
Target Start/End: Original strand, 14629288 - 14629336
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaa 137  Q
    |||||||||| ||||||| |||| | |||||||||||||||||||||||    
T  14629288 ggtccttttactttgacagaattcccaagttagtcctttaagtttcaaa 14629336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 90 - 142
Target Start/End: Original strand, 24707471 - 24707523
Alignment:
Q  90 gtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagttt 142  Q
    ||||||||||||| ||| |||||| |||||||||||||||||||  |||||||    
T  24707471 gtccttttagttttacagaatttccaagttagtcctttaagttttcaaagttt 24707523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 228
Target Start/End: Original strand, 24707518 - 24707558
Alignment:
Q  188 aagtttcaaatagatcattttagttgataaactatttcacc 228  Q
    |||||| ||||| ||||||||||||||||||||||||||||    
T  24707518 aagttttaaatatatcattttagttgataaactatttcacc 24707558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 89 - 137
Target Start/End: Complemental strand, 35556035 - 35555987
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaa 137  Q
    ||||||||||||||| ||||||| | |||||| ||||||||||||||||    
T  35556035 ggtccttttagtttggcaaaattcccaagttaatcctttaagtttcaaa 35555987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 90 - 137
Target Start/End: Original strand, 14964737 - 14964784
Alignment:
Q  90 gtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaa 137  Q
    ||||||||||||||||| |||||  ||||||||| |||||||||||||    
T  14964737 gtccttttagtttgacagaattttcaagttagtcttttaagtttcaaa 14964784  T

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Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 197
Target Start/End: Original strand, 50530246 - 50530297
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    |||| ||||||||||||||||||||| |||| ||| || |||||||||||||    
T  50530246 tttgatccttttagtttgacagaattttcaacttagtcttttaagtttcaaa 50530297  T

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Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 164
Target Start/End: Complemental strand, 14964814 - 14964780
Alignment:
Q  130 gtttcaaaagtttcaatttggtccttttagtttga 164  Q
    |||||||||||||||| ||||||||||||||||||    
T  14964814 gtttcaaaagtttcaacttggtccttttagtttga 14964780  T

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Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 332
Target Start/End: Complemental strand, 21410234 - 21410151
Alignment:
Q  247 cgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatca 332  Q
    |||||||||||||  ||| ||||||| | | | ||| ||| ||| ||| ||||||||||||| |||||||||||||||||| ||||    
T  21410234 cgttaagttgttg--ttggatcaaaacgatatgtttcaaaggcttcagggtgtcaaaacgctgcgtttaatggtcacaaatgatca 21410151  T

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Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 151 - 197
Target Start/End: Original strand, 31247192 - 31247237
Alignment:
Q  151 tccttttagtttgacagaattctcaagttaatcatttaagtttcaaa 197  Q
    |||||||||||||||| ||||||||||||| || |||||||||||||    
T  31247192 tccttttagtttgacaaaattctcaagttagtc-tttaagtttcaaa 31247237  T

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Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 111
Target Start/End: Original strand, 50530261 - 50530331
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatt 111  Q
    |||||||||||   ||||||||||||| |||| ||| ||| | ||||||||| ||||||||||||| ||||    
T  50530261 ttgacagaattttcaacttagtcttttaagtttcaaaagtattaattaggtcattttagtttgacagaatt 50530331  T

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Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 247 - 333
Target Start/End: Complemental strand, 53783321 - 53783235
Alignment:
Q  247 cgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgtcaaaacgctacgtttaatggtcacaaattatcat 333  Q
    |||||||||||||| ||  |||||||  |||  ||||||||||||||  |||||||||   |||||||||| ||||||||| |||||    
T  53783321 cgttaagttgttgatttagatcaaaacactgcattttaaaagctccaaggtgtcaaaatattacgtttaatagtcacaaatgatcat 53783235  T

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Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 230
Target Start/End: Original strand, 54456722 - 54456764
Alignment:
Q  188 aagtttcaaatagatcattttagttgataaactatttcaccgt 230  Q
    ||||||||||||  |||||||||||||||||||| ||||||||    
T  54456722 aagtttcaaatatgtcattttagttgataaactaattcaccgt 54456764  T

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Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 299
Target Start/End: Complemental strand, 3088034 - 3087978
Alignment:
Q  243 tagccgttaagttgttgacttgtatcaaaatgctgtcttttaaaagctccagagtgt 299  Q
    |||||||||||||||| ||||| |  ||| || ||||||||||||||||| ||||||    
T  3088034 tagccgttaagttgttaacttgaagaaaagtgttgtcttttaaaagctcccgagtgt 3087978  T

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Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 5505595 - 5505655
Alignment:
Q  168 aattctcaagttaatcatttaagtttcaaatagatcattttagttgataaactatttcacc 228  Q
    |||| |||||||| ||||||| |||| ||| || ||||||||||||||||| | |||||||    
T  5505595 aattttcaagttactcatttaggttttaaaaaggtcattttagttgataaattttttcacc 5505655  T

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Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 182
Target Start/End: Complemental strand, 21377123 - 21377087
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaat 182  Q
    ||||||||||||||||||||||||||  |||||||||    
T  21377123 tttggtccttttagtttgacagaatttccaagttaat 21377087  T

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Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 21410305 - 21410273
Alignment:
Q  202 tcattttagttgataaactatttcaccgttacc 234  Q
    |||||||||||||||||||||||||| ||||||    
T  21410305 tcattttagttgataaactatttcactgttacc 21410273  T

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Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 31247768 - 31247720
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagtttc 194  Q
    ||||||||||||| ||||||||||||  ||||||| || ||||||||||    
T  31247768 tttggtccttttaatttgacagaatttccaagttagtcctttaagtttc 31247720  T

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Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 146 - 197
Target Start/End: Original strand, 35555526 - 35555578
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagtta-atcatttaagtttcaaa 197  Q
    |||||||||||||  |||||||||||| ||||||| ||| |||||||||||||    
T  35555526 tttggtccttttaaattgacagaattcacaagttagatcttttaagtttcaaa 35555578  T

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Target: scaffold0041 (Bit Score: 60; Significance: 2e-25; HSPs: 3)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 41 - 176
Target Start/End: Complemental strand, 45312 - 45177
Alignment:
Q  41 ttgacagaattcctaacttagtcttttgagttgcaagagtgtcaattaggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagt 140  Q
    |||||| |||||  || |||||||||| ||||  || ||| ||||||||||||||||||||||||| |||||  || |||||| ||||||||| ||||||    
T  45312 ttgacataattctcaagttagtcttttaagttttaaaagtttcaattaggtccttttagtttgacataattttcaaattagtcatttaagttttaaaagt 45213  T
Q  141 ttcaatttggtccttttagtttgacagaattctcaa 176  Q
    ||||| | | |||||||| |||||||||||||||||    
T  45212 ttcaaatagatccttttaatttgacagaattctcaa 45177  T

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Target: scaffold0041; HSP #2
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 89 - 193
Target Start/End: Complemental strand, 45324 - 45220
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtttgacagaattctcaagttaatcattta 188  Q
    ||||||||| |||||||| ||||   ||||||||| ||||||||| ||||||||||||| |||||||||||||||||| |||| |||| ||| |||||||    
T  45324 ggtccttttggtttgacataattctcaagttagtcttttaagttttaaaagtttcaattaggtccttttagtttgacataattttcaaattagtcattta 45225  T
Q  189 agttt 193  Q
    |||||    
T  45224 agttt 45220  T

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Target: scaffold0041; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 146 - 193
Target Start/End: Complemental strand, 45327 - 45280
Alignment:
Q  146 tttggtccttttagtttgacagaattctcaagttaatcatttaagttt 193  Q
    |||||||||||| |||||||| ||||||||||||| || |||||||||    
T  45327 tttggtccttttggtttgacataattctcaagttagtcttttaagttt 45280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 5)
Name: scaffold0374
Description:

Target: scaffold0374; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 89 - 161
Target Start/End: Original strand, 16176 - 16248
Alignment:
Q  89 ggtccttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtttcaatttggtccttttagtt 161  Q
    |||||||||||||||| |||||||| || |||||||||||||||| |||||||| || | |||| ||||||||    
T  16176 ggtccttttagtttgataaaatttccaaattagtcctttaagtttaaaaagttttaaataggtcattttagtt 16248  T

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Target: scaffold0374; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 188 - 235
Target Start/End: Original strand, 16224 - 16271
Alignment:
Q  188 aagtttcaaatagatcattttagttgataaactatttcaccgttaccc 235  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||    
T  16224 aagttttaaataggtcattttagttgataaactatttcaccgttaccc 16271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 94 - 141
Target Start/End: Original strand, 16081 - 16128
Alignment:
Q  94 ttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagtt 141  Q
    ||||||||| ||||||||  |||||||||| |||||||||||||||||    
T  16081 ttttagtttcacaaaattcttaagttagtcttttaagtttcaaaagtt 16128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 93 - 142
Target Start/End: Complemental strand, 16664 - 16615
Alignment:
Q  93 cttttagtttgacaaaatttctaagttagtcctttaagtttcaaaagttt 142  Q
    ||||| |||||| |||||||| |||||| |||||||||||| ||||||||    
T  16664 ctttttgtttgataaaatttccaagttaatcctttaagtttaaaaagttt 16615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0374; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 188 - 232
Target Start/End: Complemental strand, 16620 - 16576
Alignment:
Q  188 aagtttcaaatagatcattttagttgataaactatttcaccgtta 232  Q
    |||||| |||||  |||||||||||||||||||||||||| ||||    
T  16620 aagttttaaataagtcattttagttgataaactatttcacagtta 16576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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