View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2687_low_63 (Length: 300)
Name: NF2687_low_63
Description: NF2687
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2687_low_63 |
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Alignment Details
Target: chr1 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 52874764 - 52874484
Alignment:
| Q |
1 |
tagtcaaagatgaaaggaaaggcatagtagcattcatgatgaggtaattcattgattataaatttccaatttaagcatcgttaaaacactagttaaatga |
100 |
Q |
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| T |
52874764 |
tagtcaaagatgaaaggaaaggcatagtagcattcatgatgaggtaattcattgattataaatttccaatttaagcatcgttaaaacactagttaaatga |
52874665 |
T |
|
| Q |
101 |
aagtgtaactttacatcatgatataccaaatgatttaaaagtcactccataacatatttaagaaactatcataaactagtacaaatataaggttacatga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52874664 |
aagtgtaactttacatcatgatataccaaatgatttaaaagtcactccataacatatttaagaaactatcataaactagtacaaatataaggttacatga |
52874565 |
T |
|
| Q |
201 |
aaaaaccttgggagataattcattatagcgttcatcaagctgatcacgagcagttaagtctgaccataacgaagcacatat |
281 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
52874564 |
aaaaaccttgggagataattcattatagcgttcatcaagctgatcacgagcagttaagtctgaccataacgaagcacatat |
52874484 |
T |
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