View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2687_low_78 (Length: 267)

Name: NF2687_low_78
Description: NF2687
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2687_low_78
NF2687_low_78
[»] chr3 (20 HSPs)
chr3 (11-173)||(42767487-42767649)
chr3 (173-214)||(16884083-16884124)
chr3 (173-214)||(34641083-34641124)
chr3 (173-214)||(42699724-42699765)
chr3 (173-214)||(42772123-42772164)
chr3 (173-214)||(40858656-40858697)
chr3 (173-214)||(41414169-41414210)
chr3 (173-214)||(44412452-44412493)
chr3 (173-214)||(48683703-48683744)
chr3 (175-213)||(18086095-18086133)
chr3 (180-214)||(21090190-21090224)
chr3 (173-214)||(10943726-10943767)
chr3 (173-214)||(17474318-17474359)
chr3 (173-214)||(18654712-18654753)
chr3 (173-214)||(24253813-24253854)
chr3 (173-214)||(26135888-26135929)
chr3 (173-214)||(36727268-36727308)
chr3 (173-214)||(46978518-46978559)
chr3 (173-214)||(54996792-54996833)
chr3 (174-214)||(46204977-46205017)
[»] chr8 (10 HSPs)
chr8 (173-214)||(12022255-12022296)
chr8 (173-214)||(43732778-43732819)
chr8 (173-213)||(16024246-16024286)
chr8 (177-214)||(20472808-20472845)
chr8 (175-214)||(8671908-8671947)
chr8 (173-214)||(9933332-9933373)
chr8 (173-214)||(26167847-26167888)
chr8 (173-214)||(43826423-43826464)
chr8 (173-213)||(27483652-27483692)
chr8 (173-213)||(34196402-34196441)
[»] chr5 (10 HSPs)
chr5 (173-214)||(10204667-10204708)
chr5 (173-214)||(8551530-8551571)
chr5 (173-214)||(34980901-34980942)
chr5 (175-214)||(15986738-15986777)
chr5 (173-214)||(10043121-10043162)
chr5 (173-214)||(10043343-10043384)
chr5 (173-214)||(21581038-21581079)
chr5 (173-214)||(33744305-33744346)
chr5 (173-214)||(40305777-40305818)
chr5 (173-213)||(12036047-12036087)
[»] chr4 (15 HSPs)
chr4 (173-214)||(14539363-14539404)
chr4 (173-214)||(17182597-17182638)
chr4 (173-214)||(43961501-43961542)
chr4 (173-214)||(56135840-56135881)
chr4 (173-214)||(4437537-4437578)
chr4 (173-214)||(22186810-22186851)
chr4 (173-214)||(47846167-47846208)
chr4 (173-204)||(54001215-54001246)
chr4 (173-214)||(5730942-5730983)
chr4 (173-210)||(7977608-7977645)
chr4 (173-214)||(27735836-27735877)
chr4 (173-214)||(34995142-34995183)
chr4 (173-214)||(37711234-37711275)
chr4 (173-214)||(55080670-55080711)
chr4 (173-213)||(54576439-54576479)
[»] chr2 (10 HSPs)
chr2 (173-214)||(15085812-15085853)
chr2 (173-214)||(33265697-33265738)
chr2 (173-214)||(45098260-45098301)
chr2 (173-214)||(45257398-45257439)
chr2 (173-213)||(31928156-31928196)
chr2 (173-214)||(21502124-21502165)
chr2 (173-214)||(31061450-31061491)
chr2 (173-214)||(35325360-35325401)
chr2 (177-214)||(2381103-2381140)
chr2 (173-214)||(41778864-41778905)
[»] chr1 (10 HSPs)
chr1 (173-214)||(1085602-1085643)
chr1 (173-214)||(2506630-2506671)
chr1 (173-214)||(25268355-25268396)
chr1 (173-214)||(51303496-51303537)
chr1 (176-214)||(33643359-33643397)
chr1 (173-214)||(35927904-35927945)
chr1 (172-213)||(40287366-40287407)
chr1 (173-214)||(40709404-40709445)
chr1 (173-214)||(50079496-50079537)
chr1 (180-213)||(20607311-20607344)
[»] chr7 (14 HSPs)
chr7 (173-213)||(28074215-28074255)
chr7 (173-213)||(33519140-33519180)
chr7 (173-214)||(3143571-3143612)
chr7 (173-213)||(12670948-12670988)
chr7 (173-204)||(36267665-36267696)
chr7 (172-202)||(31364153-31364183)
chr7 (173-214)||(3215972-3216013)
chr7 (173-214)||(16833786-16833827)
chr7 (173-214)||(18063673-18063714)
chr7 (173-214)||(21857438-21857479)
chr7 (173-214)||(33655220-33655261)
chr7 (173-214)||(35422055-35422096)
chr7 (173-213)||(20393693-20393733)
chr7 (173-213)||(48015299-48015339)
[»] chr6 (9 HSPs)
chr6 (173-214)||(3841176-3841217)
chr6 (173-214)||(25468511-25468552)
chr6 (173-214)||(26318396-26318437)
chr6 (173-214)||(4097347-4097388)
chr6 (173-214)||(29692969-29693010)
chr6 (173-213)||(15353456-15353495)
chr6 (173-209)||(28477076-28477112)
chr6 (173-201)||(31799025-31799053)
chr6 (173-213)||(32926737-32926777)
[»] scaffold0119 (1 HSPs)
scaffold0119 (173-214)||(37474-37515)
[»] scaffold0007 (1 HSPs)
scaffold0007 (173-214)||(242307-242348)
[»] scaffold0071 (1 HSPs)
scaffold0071 (173-213)||(52977-53017)
[»] scaffold0026 (1 HSPs)
scaffold0026 (173-213)||(1509-1549)


Alignment Details
Target: chr3 (Bit Score: 142; Significance: 1e-74; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 11 - 173
Target Start/End: Complemental strand, 42767649 - 42767487
Alignment:
Q  11 cagagattgtgtagaagaagctgctgacgctttctcgtatttgaaagcaaattacacctgtgggcatgtgagacaaaaactaactccgctgaataactat 110  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42767649 cagagattgtgtagaagaagctgctgacgctttctcgtatttgaaagcaaattacacctgtgggcatgtgagacaaaaactaactccgctgaataactat 42767550  T
Q  111 taaaacttcatgannnnnnnccataattataaatgtcaagattaatctagtgtattccatcca 173  Q
    |||||||||||||       |||||||||||||||||||||||||||||||||||||||||||    
T  42767549 taaaacttcatgatttttttccataattataaatgtcaagattaatctagtgtattccatcca 42767487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 16884083 - 16884124
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  16884083 ataaatgatcatataatacttcaaaaacacttaatttatttt 16884124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 34641124 - 34641083
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  34641124 ataaatgatcatataatacttcaaaaacacttaatttatttt 34641083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 42699724 - 42699765
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  42699724 ataaatgatcatataatacttcaaaaacacttaatttatttt 42699765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 42772164 - 42772123
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  42772164 ataaatgatcatataatacttcaaaaacacttaatttatttt 42772123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 40858697 - 40858656
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||||||||||||||||||||||||||||  |||||||||    
T  40858697 ataaatgatcatataatacttcaaaaacactaaatttatttt 40858656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 41414210 - 41414169
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||||||||||||||||||||||||| ||| |||||||||    
T  41414210 ataaatgatcatataatacttcaaaaacgcttgatttatttt 41414169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 44412493 - 44412452
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||| ||||||||||||||||||||||||| |||||||||    
T  44412493 ataaatcatcatataatacttcaaaaacacttaatttatttt 44412452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 48683744 - 48683703
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  48683744 ataaatgatcatataatatttcaaaaacacttaatttatttt 48683703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 213
Target Start/End: Original strand, 18086095 - 18086133
Alignment:
Q  175 aaatgatcatataatacttcaaaaacacttcatttattt 213  Q
    ||||||||||| |||||||||||||||||| ||||||||    
T  18086095 aaatgatcataaaatacttcaaaaacacttaatttattt 18086133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 21090190 - 21090224
Alignment:
Q  180 atcatataatacttcaaaaacacttcatttatttt 214  Q
    ||||||||||||||||||||||||| |||||||||    
T  21090190 atcatataatacttcaaaaacacttaatttatttt 21090224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 10943726 - 10943767
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||| || |||||||||||||||||||||| |||||||||    
T  10943726 ataaataattatataatacttcaaaaacacttaatttatttt 10943767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 17474318 - 17474359
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||| |||| |||||||||||||||||||| |||||||||    
T  17474318 ataaataatcaaataatacttcaaaaacacttaatttatttt 17474359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 18654712 - 18654753
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    ||||||||||||||||||||||||  |||||| |||||||||    
T  18654712 ataaatgatcatataatacttcaattacacttaatttatttt 18654753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 24253854 - 24253813
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    ||||||||| |||||| ||||||||||||||| |||||||||    
T  24253854 ataaatgattatataacacttcaaaaacacttaatttatttt 24253813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 26135929 - 26135888
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||| || |||||||||||||||||||||| |||||||||    
T  26135929 ataaataattatataatacttcaaaaacacttaatttatttt 26135888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 36727308 - 36727268
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||| ||||||||||||||||||||||||| |||||||||    
T  36727308 ataaattatcatataatacttcaaaaacactt-atttatttt 36727268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 46978559 - 46978518
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    ||||||||| ||||||||||||||||||| || |||||||||    
T  46978559 ataaatgattatataatacttcaaaaacatttaatttatttt 46978518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 54996792 - 54996833
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    ||||||||||||||||||||||||  |||||||||| |||||    
T  54996792 ataaatgatcatataatacttcaatcacacttcattcatttt 54996833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 214
Target Start/End: Complemental strand, 46205017 - 46204977
Alignment:
Q  174 taaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||||||||||||||||||||  |||||| |||||||||    
T  46205017 taaatgatcatataatacttcaatcacacttaatttatttt 46204977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 12022255 - 12022296
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  12022255 ataaatgatcatataatacttcaaaaacacttaatttatttt 12022296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 43732819 - 43732778
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  43732819 ataaatgatcatataatacttcaaaaacacttaatttatttt 43732778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 16024286 - 16024246
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttattt 213  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  16024286 ataaatgatcatataatacttcaaaaacacttaatttattt 16024246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 20472808 - 20472845
Alignment:
Q  177 atgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||||||||||||||||||||||||| |||||||||    
T  20472808 atgatcatataatacttcaaaaacacttgatttatttt 20472845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 214
Target Start/End: Original strand, 8671908 - 8671947
Alignment:
Q  175 aaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    ||||||||||||||||||||||||| |||| |||||||||    
T  8671908 aaatgatcatataatacttcaaaaatacttaatttatttt 8671947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 9933373 - 9933332
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||||||||||||||| |||||||| |||| |||||||||    
T  9933373 ataaatgatcatataatatttcaaaaatacttaatttatttt 9933332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 26167888 - 26167847
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||||||||||||||||||||| ||| ||| |||||||||    
T  26167888 ataaatgatcatataatacttcaataactctttatttatttt 26167847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 43826464 - 43826423
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    ||||||||||||| |||||||||||||||||| | |||||||    
T  43826464 ataaatgatcataaaatacttcaaaaacacttaacttatttt 43826423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 27483692 - 27483652
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttattt 213  Q
    |||||| ||||||||||||||||| ||||||| ||||||||    
T  27483692 ataaattatcatataatacttcaataacactttatttattt 27483652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 34196441 - 34196402
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttattt 213  Q
    ||||| |||||||||||||||||||||||||| ||||||||    
T  34196441 ataaacgatcatataatacttcaaaaacactt-atttattt 34196402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 38; Significance: 0.000000000002; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 10204708 - 10204667
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  10204708 ataaatgatcatataatacttcaaaaacacttaatttatttt 10204667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 8551530 - 8551571
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    ||||||||||||||||||||| |||||||||| |||||||||    
T  8551530 ataaatgatcatataatactttaaaaacacttaatttatttt 8551571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 34980942 - 34980901
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    ||||||||| |||||||||||||||||||||| |||||||||    
T  34980942 ataaatgattatataatacttcaaaaacacttaatttatttt 34980901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 214
Target Start/End: Original strand, 15986738 - 15986777
Alignment:
Q  175 aaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    ||||||||||||||||||| |||||||||| |||||||||    
T  15986738 aaatgatcatataatactttaaaaacacttaatttatttt 15986777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 10043121 - 10043162
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    ||||||||||||||||||||| |||||||||| ||| |||||    
T  10043121 ataaatgatcatataatactttaaaaacacttaattaatttt 10043162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 10043384 - 10043343
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||| ||||||||||||||||||||||||| |||| ||||    
T  10043384 ataaataatcatataatacttcaaaaacacttaatttctttt 10043343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 21581079 - 21581038
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    ||||||| |||||| ||||||||||||||||| |||||||||    
T  21581079 ataaatgttcatatgatacttcaaaaacacttaatttatttt 21581038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 33744305 - 33744346
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    ||||||||||||||| | |||||||||||||| |||||||||    
T  33744305 ataaatgatcatatatttcttcaaaaacacttaatttatttt 33744346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 40305777 - 40305818
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    ||||||||||||||| |||||||||||| ||| |||||||||    
T  40305777 ataaatgatcatatagtacttcaaaaacccttaatttatttt 40305818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 12036047 - 12036087
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttattt 213  Q
    |||||| |||||||||||||| |||||||||| ||||||||    
T  12036047 ataaattatcatataatacttaaaaaacacttaatttattt 12036087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 38; Significance: 0.000000000002; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 14539404 - 14539363
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  14539404 ataaatgatcatataatacttcaaaaacacttaatttatttt 14539363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 17182597 - 17182638
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  17182597 ataaatgatcatataatacttcaaaaacacttaatttatttt 17182638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 43961542 - 43961501
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  43961542 ataaatgatcatataatacttcaaaaacacttaatttatttt 43961501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 56135881 - 56135840
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  56135881 ataaatgatcatataatacttcaaaaacacttaatttatttt 56135840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 4437537 - 4437578
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||| ||||||||||||||||||||||||||| |||||||||    
T  4437537 ataattgatcatataatacttcaaaaacacttgatttatttt 4437578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 22186851 - 22186810
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    ||||||||| |||||||||||||||||||||| |||||||||    
T  22186851 ataaatgattatataatacttcaaaaacactttatttatttt 22186810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 47846167 - 47846208
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||| ||||||||||||||||||||||||| |||||||||    
T  47846167 ataaataatcatataatacttcaaaaacacttaatttatttt 47846208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 204
Target Start/End: Original strand, 54001215 - 54001246
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacactt 204  Q
    ||||||||||||||||||||||||||||||||    
T  54001215 ataaatgatcatataatacttcaaaaacactt 54001246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 5730942 - 5730983
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    ||||||||||||||||||||||||  |||||| |||||||||    
T  5730942 ataaatgatcatataatacttcaattacacttaatttatttt 5730983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 7977608 - 7977645
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcattta 210  Q
    ||||||||||||||||||||||||||||| || |||||    
T  7977608 ataaatgatcatataatacttcaaaaacaattaattta 7977645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 27735877 - 27735836
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    ||||||||||||||||||||||||  |||||| |||||||||    
T  27735877 ataaatgatcatataatacttcaatcacacttaatttatttt 27735836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 34995183 - 34995142
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||| ||| ||||||||||||||||||||| |||||||||    
T  34995183 ataaataatcttataatacttcaaaaacacttaatttatttt 34995142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 37711275 - 37711234
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    ||||||||||||||||||||||||  |||||| |||||||||    
T  37711275 ataaatgatcatataatacttcaatcacacttaatttatttt 37711234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 55080711 - 55080670
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    ||||||||||||| |||||||||||||||||| | |||||||    
T  55080711 ataaatgatcataaaatacttcaaaaacacttaacttatttt 55080670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 54576439 - 54576479
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttattt 213  Q
    ||||||||| ||||||||||||||||||| || ||||||||    
T  54576439 ataaatgattatataatacttcaaaaacatttaatttattt 54576479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 15085812 - 15085853
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  15085812 ataaatgatcatataatacttcaaaaacacttaatttatttt 15085853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 33265738 - 33265697
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  33265738 ataaatgatcatataatacttcaaaaacacttaatttatttt 33265697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 45098301 - 45098260
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  45098301 ataaatgatcatataatacttcaaaaacacttaatttatttt 45098260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 45257439 - 45257398
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  45257439 ataaatgatcatataatacttcaaaaacacttaatttatttt 45257398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 31928156 - 31928196
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttattt 213  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  31928156 ataaatgatcatataatacttcaaaaacacttaatttattt 31928196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 21502165 - 21502124
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    ||||||| |||||||||||||||||||||||| |||||||||    
T  21502165 ataaatggtcatataatacttcaaaaacacttaatttatttt 21502124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 31061491 - 31061450
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||||||||||||||| ||||||||||||| |||||||||    
T  31061491 ataaatgatcatataatatttcaaaaacacttaatttatttt 31061450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 35325401 - 35325360
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    ||||||||||||||||||||||||||| |||| |||||||||    
T  35325401 ataaatgatcatataatacttcaaaaatacttaatttatttt 35325360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 177 - 214
Target Start/End: Original strand, 2381103 - 2381140
Alignment:
Q  177 atgatcatataatacttcaaaaacacttcatttatttt 214  Q
    ||||| |||||||||||||||||||||| |||||||||    
T  2381103 atgatgatataatacttcaaaaacacttaatttatttt 2381140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 41778905 - 41778864
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    ||||||||||||||||||||||||  |||||| |||||||||    
T  41778905 ataaatgatcatataatacttcaatcacacttaatttatttt 41778864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000002; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 1085602 - 1085643
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  1085602 ataaatgatcatataatacttcaaaaacacttaatttatttt 1085643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 2506671 - 2506630
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  2506671 ataaatgatcatataatacttcaaaaacacttaatttatttt 2506630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 25268396 - 25268355
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  25268396 ataaatgatcatataatacttcaaaaacacttaatttatttt 25268355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 51303496 - 51303537
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  51303496 ataaatgatcatataatacttcaaaaacacttaatttatttt 51303537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 176 - 214
Target Start/End: Complemental strand, 33643397 - 33643359
Alignment:
Q  176 aatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  33643397 aatgatcatataatacttcaaaaacacttaatttatttt 33643359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 35927945 - 35927904
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    ||||||||||||||||||||||||||| |||| |||||||||    
T  35927945 ataaatgatcatataatacttcaaaaatacttaatttatttt 35927904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 213
Target Start/End: Original strand, 40287366 - 40287407
Alignment:
Q  172 cataaatgatcatataatacttcaaaaacacttcatttattt 213  Q
    |||||||||| |||||||||||||||||||||| ||||||||    
T  40287366 cataaatgattatataatacttcaaaaacacttaatttattt 40287407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 40709404 - 40709445
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||||||||||||||||||||||||||||| |||| ||||    
T  40709404 ataaatgatcatataatacttcaaaaacacttaatttctttt 40709445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 50079496 - 50079537
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    ||||||||||||||||||||| |||||||||| |||||||||    
T  50079496 ataaatgatcatataatactttaaaaacacttaatttatttt 50079537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 180 - 213
Target Start/End: Complemental strand, 20607344 - 20607311
Alignment:
Q  180 atcatataatacttcaaaaacacttcatttattt 213  Q
    ||||||||||||||||||||||||| ||||||||    
T  20607344 atcatataatacttcaaaaacacttaatttattt 20607311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000006; HSPs: 14)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 28074215 - 28074255
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttattt 213  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  28074215 ataaatgatcatataatacttcaaaaacacttaatttattt 28074255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 33519180 - 33519140
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttattt 213  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  33519180 ataaatgatcatataatacttcaaaaacacttaatttattt 33519140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 3143612 - 3143571
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    ||||||||||||||||||||||||||| |||| |||||||||    
T  3143612 ataaatgatcatataatacttcaaaaaaacttaatttatttt 3143571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 12670948 - 12670988
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttattt 213  Q
    |||||||||||||||||||||||||||||||| ||| ||||    
T  12670948 ataaatgatcatataatacttcaaaaacacttaattcattt 12670988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 204
Target Start/End: Original strand, 36267665 - 36267696
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacactt 204  Q
    ||||||||||||||||||||||||||||||||    
T  36267665 ataaatgatcatataatacttcaaaaacactt 36267696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 202
Target Start/End: Original strand, 31364153 - 31364183
Alignment:
Q  172 cataaatgatcatataatacttcaaaaacac 202  Q
    |||||||||||||||||||||||||||||||    
T  31364153 cataaatgatcatataatacttcaaaaacac 31364183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 3215972 - 3216013
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    ||||||||||||||||||||||| ||| |||| |||||||||    
T  3215972 ataaatgatcatataatacttcataaatacttgatttatttt 3216013  T

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Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 16833827 - 16833786
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||||||||| ||||||||||||||||||| |||| ||||    
T  16833827 ataaatgatcatgtaatacttcaaaaacacttaatttttttt 16833786  T

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Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 18063673 - 18063714
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    ||||||||||||||||||||||||  |||||| |||||||||    
T  18063673 ataaatgatcatataatacttcaatcacacttaatttatttt 18063714  T

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Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 21857479 - 21857438
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    ||||||||||||| |||| ||||||||||||| |||||||||    
T  21857479 ataaatgatcatacaatatttcaaaaacacttaatttatttt 21857438  T

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Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 33655220 - 33655261
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    ||||||||||||||||||||||||  |||||| |||||||||    
T  33655220 ataaatgatcatataatacttcaatcacacttaatttatttt 33655261  T

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Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 35422096 - 35422055
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||| ||||||| ||||||||||||||||| |||||||||    
T  35422096 ataaataatcatatgatacttcaaaaacacttaatttatttt 35422055  T

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Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 20393733 - 20393693
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttattt 213  Q
    ||||||||||||||||||||||||  |||||| ||||||||    
T  20393733 ataaatgatcatataatacttcaatcacacttaatttattt 20393693  T

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Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 48015339 - 48015299
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttattt 213  Q
    |||||||||||||||||  ||||||||||||| ||||||||    
T  48015339 ataaatgatcatataatttttcaaaaacacttaatttattt 48015299  T

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Target: chr6 (Bit Score: 34; Significance: 0.0000000004; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 3841217 - 3841176
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    ||||||||| |||||||||||||||||||||| |||||||||    
T  3841217 ataaatgatgatataatacttcaaaaacacttaatttatttt 3841176  T

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Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 25468511 - 25468552
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    ||||||||| |||||||||||||||||||||| |||||||||    
T  25468511 ataaatgattatataatacttcaaaaacacttaatttatttt 25468552  T

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Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 26318437 - 26318396
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||| ||||||||||||||||||||||||||| |||||||||    
T  26318437 ataattgatcatataatacttcaaaaacacttaatttatttt 26318396  T

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Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Original strand, 4097347 - 4097388
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    ||||||||||||| |||||||| ||||||||| |||||||||    
T  4097347 ataaatgatcatacaatacttccaaaacacttaatttatttt 4097388  T

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Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 29693010 - 29692969
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||||||||||| ||||||||||||||||||| |||| ||||    
T  29693010 ataaatgatcatgtaatacttcaaaaacacttaatttgtttt 29692969  T

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Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 15353495 - 15353456
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttattt 213  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  15353495 ataaatgatcatataatacatcaaaaacactt-atttattt 15353456  T

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Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 28477112 - 28477076
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcattt 209  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  28477112 ataaatgatcatgtaatacttcaaaaacacttaattt 28477076  T

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Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 201
Target Start/End: Complemental strand, 31799053 - 31799025
Alignment:
Q  173 ataaatgatcatataatacttcaaaaaca 201  Q
    |||||||||||||||||||||||||||||    
T  31799053 ataaatgatcatataatacttcaaaaaca 31799025  T

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Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 32926777 - 32926737
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttattt 213  Q
    ||||||||||||||||||||||||  |||||| ||||||||    
T  32926777 ataaatgatcatataatacttcaatcacacttaatttattt 32926737  T

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Target: scaffold0119 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 37515 - 37474
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    |||| ||||||||||| ||||||||||||||| |||||||||    
T  37515 ataagtgatcatataacacttcaaaaacacttgatttatttt 37474  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 173 - 214
Target Start/End: Complemental strand, 242348 - 242307
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttatttt 214  Q
    ||||||||| |||||||| |||||||| ||||||||||||||    
T  242348 ataaatgatgatataataattcaaaaatacttcatttatttt 242307  T

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Target: scaffold0071 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 53017 - 52977
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttattt 213  Q
    |||||||||||||||||| ||||||||||||| || |||||    
T  53017 ataaatgatcatataatatttcaaaaacacttaatgtattt 52977  T

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Target: scaffold0026 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 173 - 213
Target Start/End: Original strand, 1509 - 1549
Alignment:
Q  173 ataaatgatcatataatacttcaaaaacacttcatttattt 213  Q
    ||||||||||||||||||||| ||||| |||| ||||||||    
T  1509 ataaatgatcatataatacttaaaaaatacttaatttattt 1549  T

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