View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2688_high_2 (Length: 467)

Name: NF2688_high_2
Description: NF2688
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2688_high_2
NF2688_high_2
[»] scaffold0038 (4 HSPs)
scaffold0038 (128-392)||(45174-45441)
scaffold0038 (191-351)||(37888-38050)
scaffold0038 (1-146)||(37740-37889)
scaffold0038 (415-459)||(45457-45501)
[»] chr6 (5 HSPs)
chr6 (128-392)||(28245012-28245279)
chr6 (2-351)||(28523723-28524075)
chr6 (191-351)||(28237726-28237888)
chr6 (1-146)||(28237578-28237727)
chr6 (415-459)||(28245295-28245339)
[»] chr2 (2 HSPs)
chr2 (18-348)||(32600874-32601207)
chr2 (2-165)||(36064999-36065157)
[»] chr5 (5 HSPs)
chr5 (6-83)||(16993523-16993600)
chr5 (272-332)||(6434890-6434949)
chr5 (1-59)||(6434631-6434689)
chr5 (272-333)||(16993272-16993333)
chr5 (290-322)||(13502347-13502379)
[»] chr1 (5 HSPs)
chr1 (214-352)||(21424818-21424958)
chr1 (2-107)||(21425109-21425216)
chr1 (214-333)||(28217061-28217173)
chr1 (3-83)||(24780742-24780820)
chr1 (272-333)||(40936588-40936649)
[»] chr8 (3 HSPs)
chr8 (2-165)||(30838021-30838184)
chr8 (289-351)||(16054685-16054749)
chr8 (289-351)||(30837903-30837967)
[»] scaffold0010 (2 HSPs)
scaffold0010 (2-92)||(171109-171199)
scaffold0010 (274-351)||(235612-235691)
[»] chr3 (2 HSPs)
chr3 (2-83)||(45884578-45884660)
chr3 (274-332)||(27047774-27047832)
[»] chr7 (4 HSPs)
chr7 (285-351)||(22384091-22384159)
chr7 (270-351)||(9699155-9699238)
chr7 (273-324)||(9698916-9698967)
chr7 (415-455)||(22384252-22384292)
[»] chr4 (2 HSPs)
chr4 (270-351)||(13565532-13565615)
chr4 (273-324)||(13565293-13565344)


Alignment Details
Target: scaffold0038 (Bit Score: 189; Significance: 1e-102; HSPs: 4)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 128 - 392
Target Start/End: Original strand, 45174 - 45441
Alignment:
Q  128 tgtcagtgttgtatagatataatagtctcctaagagtataatgcaaacaatctattgatttactaa-tagtcatgcaattcttttccttatagatataat 226  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||    
T  45174 tgtcagtgtcgtatagatataatagtctcctaagagtataatgcaaacaatctattgatttattaaatattcatgcaattcttttccttatagatataat 45273  T
Q  227 agtaaaaattcaaacgatttcttggaggaggnnnnnnnngaattttctttatagtgagttatgaatataaacactgaattatgatccatgtgtgttattg 326  Q
    |||||||||||||||||||||||||||||||        ||| | |||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  45274 agtaaaaattcaaacgatttcttggaggaggagaaagaagaagtctctttatagtgagttatgaatataaacattgaattatgatccatgtgtgctattg 45373  T
Q  327 tgtaaa--aaattctctttagttactagcttagagtcacttggttcacatttcaaattccaactcatg 392  Q
    ||||||  | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  45374 tgtaaaacatattctctttagttactagcttagagccacttggttcacatttcaaattccaactcatg 45441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 191 - 351
Target Start/End: Original strand, 37888 - 38050
Alignment:
Q  191 taatagtcatgcaattcttttccttatagatataatagtaaaaattcaaacgatttcttggaggaggnnnnnnnngaattttctttatagtgagttatga 290  Q
    |||||||||| ||||||||||||||||||||| | |||||||||||||||| ||||||||||||| |        ||| | |||||||||||  ||||||    
T  37888 taatagtcatacaattcttttccttatagataaagtagtaaaaattcaaacaatttcttggaggatgagaaagaagaagtctctttatagtggattatga 37987  T
Q  291 atataaacactgaattatgatccatgtgtgttattgtgtaaaaaat--tctctttagttacta 351  Q
    ||||||||| | |||||| ||||||||| | |||||||||||| ||  |||||||||||||||    
T  37988 atataaacattaaattataatccatgtgcgctattgtgtaaaacatgctctctttagttacta 38050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 37740 - 37889
Alignment:
Q  1 ctcatattattttacacgagtttatatgtatcatttctttctaattctcaatctttaatctct---tcatctcaattctgttaacaaaagaacac-agtc 96  Q
    ||||||||||||||| ||| ||||| ||| || ||||||||||||||||||||||||||||||   | ||||||||| |||||||| || ||||| | ||    
T  37740 ctcatattattttactcgaatttatgtgtttcctttctttctaattctcaatctttaatctcttaattatctcaattttgttaacacaaaaacacaaatc 37839  T
Q  97 attgactttcggcaacaaccaaaagcataggtgtcagtgttgtatagata 146  Q
    ||| ||||||| |||   ||||||||||| |||||| ||| |||||||||    
T  37840 atttactttcgacaaactccaaaagcataagtgtcaatgtcgtatagata 37889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 415 - 459
Target Start/End: Original strand, 45457 - 45501
Alignment:
Q  415 gcacaatgtcaaatgaaaatgtagaataatcttcctattcatctc 459  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  45457 gcacaatgtcaaatgaaaatgtggaataatcttcctattcatctc 45501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 189; Significance: 1e-102; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 128 - 392
Target Start/End: Original strand, 28245012 - 28245279
Alignment:
Q  128 tgtcagtgttgtatagatataatagtctcctaagagtataatgcaaacaatctattgatttactaa-tagtcatgcaattcttttccttatagatataat 226  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||    
T  28245012 tgtcagtgtcgtatagatataatagtctcctaagagtataatgcaaacaatctattgatttattaaatattcatgcaattcttttccttatagatataat 28245111  T
Q  227 agtaaaaattcaaacgatttcttggaggaggnnnnnnnngaattttctttatagtgagttatgaatataaacactgaattatgatccatgtgtgttattg 326  Q
    |||||||||||||||||||||||||||||||        ||| | |||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  28245112 agtaaaaattcaaacgatttcttggaggaggagaaagaagaagtctctttatagtgagttatgaatataaacattgaattatgatccatgtgtgctattg 28245211  T
Q  327 tgtaaa--aaattctctttagttactagcttagagtcacttggttcacatttcaaattccaactcatg 392  Q
    ||||||  | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  28245212 tgtaaaacatattctctttagttactagcttagagccacttggttcacatttcaaattccaactcatg 28245279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 2 - 351
Target Start/End: Original strand, 28523723 - 28524075
Alignment:
Q  2 tcatattattttacacgagtttatatgtatcatttctttctaattctcaatctttaatctcttcatctcaattctgttaacaaaagaacaca-gtcattg 100  Q
    ||||||||||||||  |||||||| |||||| |||||||||||||||||||||  |||||||  | ||||||| |||||||||||||||||| |||||||    
T  28523723 tcatattattttacctgagtttatgtgtatcctttctttctaattctcaatctccaatctctaaa-ctcaattgtgttaacaaaagaacacaagtcattg 28523821  T
Q  101 actttcggcaacaaccaaaagcataggtgtcagtgttgtatagatataatagtctcctaagagtataatgcaaacaatctattgatttacta-atagtca 199  Q
    ||||||| |||   |||||||||||  ||||| ||| ||||||||||||||||||||||| ||||   | ||||| ||||||||||||| || |||||||    
T  28523822 actttcgacaaactccaaaagcataaatgtcaatgtagtatagatataatagtctcctaaaagtaggttccaaactatctattgatttattatatagtca 28523921  T
Q  200 tgcaattcttttccttatagatataatagtaaaaattcaaacgatttcttggaggaggnnnnnnnngaattttctttatagtgagttatgaatataaaca 299  Q
    | |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |        ||| | ||||||||||| ||||||||||||||||    
T  28523922 tacaattcttttccttatagatataatagtaaaaattcaaacgatttcttagaggaagagaaagaagaagtctctttatagtgggttatgaatataaaca 28524021  T
Q  300 ctgaattatgatccatgtgtgttattgtgtaaaaaat--tctctttagttacta 351  Q
     |||||||||||| ||||||| |||||||||||| ||  |||||||| ||||||    
T  28524022 ttgaattatgatctatgtgtgctattgtgtaaaacatgctctctttaattacta 28524075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 191 - 351
Target Start/End: Original strand, 28237726 - 28237888
Alignment:
Q  191 taatagtcatgcaattcttttccttatagatataatagtaaaaattcaaacgatttcttggaggaggnnnnnnnngaattttctttatagtgagttatga 290  Q
    |||||||||| ||||||||||||||||||||| | |||||||||||||||| ||||||||||||| |        ||| | |||||||||||  ||||||    
T  28237726 taatagtcatacaattcttttccttatagataaagtagtaaaaattcaaacaatttcttggaggatgagaaagaagaagtctctttatagtggattatga 28237825  T
Q  291 atataaacactgaattatgatccatgtgtgttattgtgtaaaaaat--tctctttagttacta 351  Q
    ||||||||| | |||||| ||||||||| | |||||||||||| ||  |||||||||||||||    
T  28237826 atataaacattaaattataatccatgtgcgctattgtgtaaaacatgctctctttagttacta 28237888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 28237578 - 28237727
Alignment:
Q  1 ctcatattattttacacgagtttatatgtatcatttctttctaattctcaatctttaatctct---tcatctcaattctgttaacaaaagaacac-agtc 96  Q
    ||||||||||||||| ||| ||||| ||| || ||||||||||||||||||||||||||||||   | ||||||||| |||||||| || ||||| | ||    
T  28237578 ctcatattattttactcgaatttatgtgtttcctttctttctaattctcaatctttaatctcttaattatctcaattttgttaacacaaaaacacaaatc 28237677  T
Q  97 attgactttcggcaacaaccaaaagcataggtgtcagtgttgtatagata 146  Q
    ||| ||||||| |||   ||||||||||| |||||| ||| |||||||||    
T  28237678 atttactttcgacaaactccaaaagcataagtgtcaatgtcgtatagata 28237727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 415 - 459
Target Start/End: Original strand, 28245295 - 28245339
Alignment:
Q  415 gcacaatgtcaaatgaaaatgtagaataatcttcctattcatctc 459  Q
    |||||||||||||||||||||| ||||||||||||||||||||||    
T  28245295 gcacaatgtcaaatgaaaatgtggaataatcttcctattcatctc 28245339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 18 - 348
Target Start/End: Complemental strand, 32601207 - 32600874
Alignment:
Q  18 gagtttatatgtatcatttctttctaattctcaatctttaatctcttcatctcaattctgttaacaaaagaacacagtcattgactttcggcaacaacca 117  Q
    |||||||| |||||| |||||||  ||||||||||||||||||||| |||| ||||| |||||||| |||       |||||||| || | |||||  ||    
T  32601207 gagtttatgtgtatcctttcttttcaattctcaatctttaatctctccatcccaattttgttaacacaag-------tcattgacattggacaacaggca 32601115  T
Q  118 aaagcataggtgtcagtgt--tgtatagatataata--gtctcctaagagtataatgcaaacaatctattgatttact-aatagtcatgcaattcttttc 212  Q
    ||| |||| |||||||||   | |||||||||||||  ||||| |||||||||    ||||| ||  ||| || || | |||||||||  ||||  |||     
T  32601114 aaaacatacgtgtcagtgcgctttatagatataatatagtctcttaagagtatgtaccaaacgattcatttatctatttaatagtcataaaatttcttt- 32601016  T
Q  213 cttatagatataatagtaaaaattcaaacgatttcttggaggaggnnnnnnnng-----aattttctttatagtgagttatgaatataaacactgaatta 307  Q
     ||||||||||||||||||||| ||||||||||||||||||||||        |     || | |||||||||||  ||||||||||||||| |||||||    
T  32601015 -ttatagatataatagtaaaaaatcaaacgatttcttggaggaggggggtggggggaagaagtctctttatagtggtttatgaatataaacattgaatta 32600917  T
Q  308 tgatccatgtgtgttattgtgtaaaaaa--ttctctttagtta 348  Q
    |||||||||||||||||||||||||| |  |||||||||||||    
T  32600916 tgatccatgtgtgttattgtgtaaaacatgttctctttagtta 32600874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 36065157 - 36064999
Alignment:
Q  2 tcatattattttacacgagtttatatgtatcatttctttctaattctcaatctttaatctcttcatctcaattctgttaacaaaagaacacagtcattga 101  Q
    |||||||||||||   |||||||  |||||| | ||||| || |||||||||| ||||||||  ||||||||| |||||||| |       |||||||||    
T  36065157 tcatattattttatgtgagtttaagtgtatcctatctttttagttctcaatctctaatctctctatctcaattttgttaacaca-------agtcattga 36065065  T
Q  102 ctttcggcaacaaccaaaagcataggtgtcagtgttgtatagatataa--tagtctcctaagagta 165  Q
    | |||  |||||||||||| |||| ||||| ||  |||||| ||||||  ||||||| ||||||||    
T  36065064 cattcaacaacaaccaaaaacataagtgtcggtagtgtatatatataatgtagtctcttaagagta 36064999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 2e-19; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 83
Target Start/End: Complemental strand, 16993600 - 16993523
Alignment:
Q  6 attattttacacgagtttatatgtatcatttctttctaattctcaatctttaatctcttcatctcaattctgttaaca 83  Q
    |||||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||   |||||||| ||||||||    
T  16993600 attattttactcgagtttatgtgtatcatttctttctaattctcaatctttaatgtctctgtctcaattttgttaaca 16993523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 272 - 332
Target Start/End: Original strand, 6434890 - 6434949
Alignment:
Q  272 tctttatagtgagttatgaatataaacactgaattatgatccatgtgtgttattgtgtaaa 332  Q
    |||||||||||  ||||||||||||||| | |||||||||||||||||| |||||||||||    
T  6434890 tctttatagtggtttatgaatataaacatt-aattatgatccatgtgtgctattgtgtaaa 6434949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 6434631 - 6434689
Alignment:
Q  1 ctcatattattttacacgagtttatatgtatcatttctttctaattctcaatctttaat 59  Q
    ||||||||||||||| ||||||||| |||||||||||||   |||||||||||| ||||    
T  6434631 ctcatattattttacccgagtttatgtgtatcatttcttatcaattctcaatctctaat 6434689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 272 - 333
Target Start/End: Complemental strand, 16993333 - 16993272
Alignment:
Q  272 tctttatagtgagttatgaatataaacactgaattatgatccatgtgtgttattgtgtaaaa 333  Q
    |||||| ||||  |||||||||||| || | ||||||||| |||||||| ||||||||||||    
T  16993333 tctttacagtggtttatgaatataagcattaaattatgattcatgtgtgctattgtgtaaaa 16993272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 290 - 322
Target Start/End: Original strand, 13502347 - 13502379
Alignment:
Q  290 aatataaacactgaattatgatccatgtgtgtt 322  Q
    |||||||||| ||||||||||||||||||||||    
T  13502347 aatataaacattgaattatgatccatgtgtgtt 13502379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 2e-19; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 214 - 352
Target Start/End: Complemental strand, 21424958 - 21424818
Alignment:
Q  214 ttatagatataatagtaaaaatt---caaacgatttcttggaggaggnnnnnnnngaattttctttatagtgagttatgaatataaacactgaattatga 310  Q
    ||||||||||||||||||||| |   |||||||||||||||||||||        ||| | |||||||||||  ||||||||||||||| ||||||||||    
T  21424958 ttatagatataatagtaaaaaataatcaaacgatttcttggaggaggaagaa---gaagtctctttatagtggtttatgaatataaacattgaattatga 21424862  T
Q  311 tccatgtgtgttattgtgtaaaaaat--tctctttagttactag 352  Q
    |||||||||| ||||||||| || ||  ||||||| ||||||||    
T  21424861 tccatgtgtgctattgtgtagaacatgctctctttggttactag 21424818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 2 - 107
Target Start/End: Complemental strand, 21425216 - 21425109
Alignment:
Q  2 tcatattattttacacgagtttatatgtatcatttctttctaa-ttctcaatctttaatctcttcatctcaattctgttaacaaaagaacac-agtcatt 99  Q
    ||||||| |||||  ||||||||| || ||| ||||||||||| || ||||||| |||||||| |||||||||| |||||||| |||||||| |||||||    
T  21425216 tcatattgttttatccgagtttatgtggatcctttctttctaatttttcaatctctaatctctccatctcaattttgttaacacaagaacacaagtcatt 21425117  T
Q  100 gactttcg 107  Q
    ||||||||    
T  21425116 gactttcg 21425109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 214 - 333
Target Start/End: Complemental strand, 28217173 - 28217061
Alignment:
Q  214 ttatagatataatagtaaaaattcaaacgatttcttggaggaggnnnnnnnngaattttctttatagtgagttatgaatataaacactgaattatgatcc 313  Q
    ||||||||||||||||||||| ||||||||||||||||||  |         ||| | |||||||||||  ||||||||||||||| ||||| | | |||    
T  28217173 ttatagatataatagtaaaaaatcaaacgatttcttggagatg-------aagaagtctctttatagtggtttatgaatataaacattgaataacgttcc 28217081  T
Q  314 atgtgtgttattgtgtaaaa 333  Q
    ||||||| ||||||||||||    
T  28217080 atgtgtgctattgtgtaaaa 28217061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 24780742 - 24780820
Alignment:
Q  3 catattattttacacgagtttatatgtatcatttctttctaattctcaatctttaatctcttcatctcaattctgttaaca 83  Q
    |||||||||||||  |||||||| ||||||||||||||  |||||||||||| || ||||  |||||||||| ||||||||    
T  24780742 catattattttacctgagtttatgtgtatcatttcttttcaattctcaatctctagtctc--catctcaattttgttaaca 24780820  T

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Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 272 - 333
Target Start/End: Complemental strand, 40936649 - 40936588
Alignment:
Q  272 tctttatagtgagttatgaatataaacactgaattatgatccatgtgtgttattgtgtaaaa 333  Q
    ||||||||||   |||||||||||| || |||||||||||||||||||| ||||||||||||    
T  40936649 tctttatagttgtttatgaatataaccattgaattatgatccatgtgtgctattgtgtaaaa 40936588  T

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Target: chr8 (Bit Score: 49; Significance: 8e-19; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 2 - 165
Target Start/End: Complemental strand, 30838184 - 30838021
Alignment:
Q  2 tcatattattttacacgagtttatatgtatcatttctttctaattctcaatctttaatctcttcatctcaattctgttaacaaaagaaca-cagtcattg 100  Q
    |||||||||||||| ||| ||||| | ||||||||||||||||||||| |||| |||||||| ||| |||||| |  ||||| |||||||  ||||||||    
T  30838184 tcatattattttacccgaatttatgtctatcatttctttctaattctcgatctctaatctctccatttcaatt-ttataacacaagaacatgagtcattg 30838086  T
Q  101 actttcggcaacaaccaaaagcataggtgtcagtgttgtatagatataatagtctcctaagagta 165  Q
    ||||| | |  || ||||||||||| |||||||||   ||  ||||||||||| || ||||||||    
T  30838085 acttttgacggcagccaaaagcataagtgtcagtgacctaatgatataatagtttcttaagagta 30838021  T

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Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 289 - 351
Target Start/End: Original strand, 16054685 - 16054749
Alignment:
Q  289 gaatataaacactgaattatgatccatgtgtgttattgtgtaaaaaa--ttctctttagttacta 351  Q
    ||||||||| | ||||||||||||||| |||| |||||||||||| |  ||||||||||||||||    
T  16054685 gaatataaatattgaattatgatccatatgtgctattgtgtaaaatatgttctctttagttacta 16054749  T

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Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 351
Target Start/End: Complemental strand, 30837967 - 30837903
Alignment:
Q  289 gaatataaacactgaattatgatccatgtgtgttattgtgtaaaaaa--ttctctttagttacta 351  Q
    ||||||||||| ||||||||||||||| |||| ||||||| |||| |  ||||| ||||||||||    
T  30837967 gaatataaacattgaattatgatccatatgtgctattgtggaaaacatgttctccttagttacta 30837903  T

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Target: scaffold0010 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 92
Target Start/End: Original strand, 171109 - 171199
Alignment:
Q  2 tcatattattttacacgagtttatatgtatcatttctttctaattctcaatctttaatctcttcatctcaattctgttaacaaaagaacac 92  Q
    |||||| ||||||  ||||||||| |||||  |||||||||| |||||||||| |||||||| |||||||||||||| |||| || |||||    
T  171109 tcatatgattttatccgagtttatgtgtatactttctttctagttctcaatctctaatctctccatctcaattctgtcaacacaataacac 171199  T

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Target: scaffold0010; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 351
Target Start/End: Original strand, 235612 - 235691
Alignment:
Q  274 tttatagtgagttatgaatataaacactgaattatgatccatgtgtgttattgtgtaaaaaa--ttctctttagttacta 351  Q
    |||||||||  |||| |||||||||||| ||||||||| |||||||||| |||| ||||| |  ||||||||| ||||||    
T  235612 tttatagtggcttatcaatataaacacttaattatgattcatgtgtgttgttgtataaaacatgttctctttaattacta 235691  T

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Target: chr3 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 45884660 - 45884578
Alignment:
Q  2 tcatattattttacacgagtttatatgtatcatttcttt-ctaattctcaatctttaatctcttcatctcaattctgttaaca 83  Q
    |||||||||||||| ||||||||| ||| || ||||||| |||||||||||| | ||||||||  ||||||||||||||||||    
T  45884660 tcatattattttacccgagtttatgtgtttcctttcttttctaattctcaatttataatctctcaatctcaattctgttaaca 45884578  T

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Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 274 - 332
Target Start/End: Complemental strand, 27047832 - 27047774
Alignment:
Q  274 tttatagtgagttatgaatataaacactgaattatgatccatgtgtgttattgtgtaaa 332  Q
    |||||||| | ||||||||||||| | ||||||||||| |||||||  |||||||||||    
T  27047832 tttatagttacttatgaatataaaaattgaattatgattcatgtgtactattgtgtaaa 27047774  T

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Target: chr7 (Bit Score: 38; Significance: 0.000000000003; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 285 - 351
Target Start/End: Original strand, 22384091 - 22384159
Alignment:
Q  285 ttatgaatataaacactgaattatgatccatgtgtgttattgtgtaaaaaat--tctctttagttacta 351  Q
    ||||||||||||| | ||||||||||||||| ||||||||||||||||  ||  |||||||||||||||    
T  22384091 ttatgaatataaagattgaattatgatccatatgtgttattgtgtaaactatgctctctttagttacta 22384159  T

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Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 351
Target Start/End: Original strand, 9699155 - 9699238
Alignment:
Q  270 tttctttatagtgagttatgaatataaacactgaattatgatccatgtgtgttattgtgtaaaaaat--tctctttagttacta 351  Q
    |||||||||||||  |||| ||||||| || ||||||||||| |||||||||| || ||||||| ||  |||||||||||||||    
T  9699155 tttctttatagtggtttataaatataaccattgaattatgattcatgtgtgttgttctgtaaaatatgctctctttagttacta 9699238  T

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Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 324
Target Start/End: Original strand, 9698916 - 9698967
Alignment:
Q  273 ctttatagtgagttatgaatataaacactgaattatgatccatgtgtgttat 324  Q
    ||||||||||  |||||||||||| || | ||||||||||||||||||||||    
T  9698916 ctttatagtggtttatgaatataaccattaaattatgatccatgtgtgttat 9698967  T

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Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 415 - 455
Target Start/End: Original strand, 22384252 - 22384292
Alignment:
Q  415 gcacaatgtcaaatgaaaatgtagaataatcttcctattca 455  Q
    |||||||||||| |||||||||| ||||||||||| |||||    
T  22384252 gcacaatgtcaactgaaaatgtacaataatcttccgattca 22384292  T

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Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 270 - 351
Target Start/End: Original strand, 13565532 - 13565615
Alignment:
Q  270 tttctttatagtgagttatgaatataaacactgaattatgatccatgtgtgttattgtgtaaaaaat--tctctttagttacta 351  Q
    |||||||||||||  |||| ||||||| || ||||||||||| |||||||||| || ||||||| ||  |||||||||||||||    
T  13565532 tttctttatagtggtttataaatataaccattgaattatgattcatgtgtgttgttctgtaaaatatgctctctttagttacta 13565615  T

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Target: chr4; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 324
Target Start/End: Original strand, 13565293 - 13565344
Alignment:
Q  273 ctttatagtgagttatgaatataaacactgaattatgatccatgtgtgttat 324  Q
    ||||||||||  |||||||||||| || | ||||||||||||||||||||||    
T  13565293 ctttatagtggtttatgaatataaccattaaattatgatccatgtgtgttat 13565344  T

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