View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2688_low_9 (Length: 264)

Name: NF2688_low_9
Description: NF2688
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2688_low_9
NF2688_low_9
[»] chr4 (19 HSPs)
chr4 (144-242)||(37867901-37867999)
chr4 (144-242)||(1044175-1044273)
chr4 (144-242)||(34151943-34152041)
chr4 (144-242)||(56140334-56140432)
chr4 (144-242)||(9490919-9491017)
chr4 (144-242)||(33384125-33384223)
chr4 (144-242)||(44558984-44559082)
chr4 (148-242)||(51426862-51426956)
chr4 (144-242)||(39590210-39590308)
chr4 (144-242)||(4783992-4784090)
chr4 (144-207)||(37959399-37959462)
chr4 (144-207)||(956120-956183)
chr4 (144-207)||(9718734-9718797)
chr4 (144-207)||(34528492-34528555)
chr4 (144-207)||(49422425-49422488)
chr4 (165-242)||(6281212-6281289)
chr4 (144-207)||(49572577-49572640)
chr4 (171-209)||(4910130-4910168)
chr4 (198-234)||(9718813-9718849)
[»] chr1 (25 HSPs)
chr1 (144-242)||(13974379-13974477)
chr1 (144-242)||(14172418-14172516)
chr1 (144-242)||(51271255-51271353)
chr1 (144-242)||(46142106-46142204)
chr1 (144-242)||(29760849-29760948)
chr1 (144-242)||(24362734-24362832)
chr1 (144-242)||(27485377-27485475)
chr1 (144-242)||(42570443-42570541)
chr1 (144-242)||(41803678-41803776)
chr1 (165-242)||(29437384-29437461)
chr1 (155-242)||(49398101-49398188)
chr1 (144-207)||(18974795-18974858)
chr1 (144-207)||(26633870-26633933)
chr1 (144-207)||(36911360-36911423)
chr1 (178-242)||(49428795-49428859)
chr1 (144-207)||(6437197-6437260)
chr1 (144-207)||(44336583-44336646)
chr1 (148-207)||(48227992-48228051)
chr1 (144-192)||(13148734-13148782)
chr1 (198-241)||(49428847-49428890)
chr1 (188-242)||(26494895-26494949)
chr1 (165-200)||(49925206-49925241)
chr1 (175-216)||(14771437-14771478)
chr1 (171-208)||(14771565-14771602)
chr1 (206-242)||(48227966-48228002)
[»] chr5 (15 HSPs)
chr5 (144-242)||(11348134-11348232)
chr5 (144-242)||(30887067-30887165)
chr5 (144-242)||(1398966-1399064)
chr5 (144-242)||(3602791-3602889)
chr5 (144-242)||(34682576-34682674)
chr5 (144-242)||(41202061-41202159)
chr5 (144-242)||(18309705-18309802)
chr5 (168-242)||(35926760-35926834)
chr5 (144-207)||(541258-541321)
chr5 (144-207)||(20199824-20199887)
chr5 (144-207)||(25499557-25499620)
chr5 (144-207)||(41799162-41799225)
chr5 (147-207)||(35566742-35566802)
chr5 (144-178)||(8539240-8539274)
chr5 (175-208)||(23190504-23190537)
[»] chr3 (22 HSPs)
chr3 (144-242)||(45099130-45099228)
chr3 (144-240)||(51694213-51694309)
chr3 (144-242)||(7247504-7247602)
chr3 (144-242)||(43571328-43571426)
chr3 (144-242)||(34691962-34692060)
chr3 (144-242)||(43478464-43478562)
chr3 (147-242)||(49217417-49217512)
chr3 (144-242)||(20374636-20374734)
chr3 (144-242)||(46345268-46345366)
chr3 (144-242)||(24701054-24701152)
chr3 (165-242)||(55205624-55205701)
chr3 (144-242)||(49611590-49611688)
chr3 (144-209)||(44223350-44223415)
chr3 (144-238)||(2429921-2430009)
chr3 (144-207)||(52568107-52568170)
chr3 (144-207)||(13894574-13894637)
chr3 (144-207)||(41579401-41579464)
chr3 (144-192)||(44490660-44490708)
chr3 (144-207)||(34645905-34645972)
chr3 (166-207)||(55267770-55267811)
chr3 (171-214)||(27096297-27096340)
chr3 (144-178)||(36136295-36136329)
[»] chr8 (12 HSPs)
chr8 (146-242)||(41276517-41276613)
chr8 (144-242)||(26455307-26455405)
chr8 (144-242)||(24862788-24862886)
chr8 (144-242)||(22550506-22550604)
chr8 (144-219)||(28168257-28168332)
chr8 (156-242)||(44051877-44051963)
chr8 (165-242)||(41855683-41855760)
chr8 (165-242)||(42604890-42604967)
chr8 (144-207)||(18438972-18439035)
chr8 (168-242)||(40703805-40703878)
chr8 (144-207)||(38872618-38872680)
chr8 (171-209)||(14120296-14120334)
[»] scaffold0176 (2 HSPs)
scaffold0176 (144-242)||(3229-3327)
scaffold0176 (144-178)||(363-397)
[»] chr7 (16 HSPs)
chr7 (144-242)||(34142304-34142402)
chr7 (144-242)||(28977891-28977990)
chr7 (146-242)||(46860853-46860949)
chr7 (144-224)||(48194294-48194374)
chr7 (144-219)||(10225532-10225607)
chr7 (144-208)||(21185955-21186019)
chr7 (144-207)||(28113112-28113175)
chr7 (144-207)||(40590215-40590278)
chr7 (144-207)||(42683884-42683947)
chr7 (144-207)||(36392462-36392525)
chr7 (144-207)||(45361969-45362032)
chr7 (144-207)||(48272130-48272194)
chr7 (144-207)||(41623560-41623623)
chr7 (175-209)||(3379761-3379795)
chr7 (144-178)||(10524024-10524058)
chr7 (144-178)||(17840587-17840621)
[»] chr6 (13 HSPs)
chr6 (144-238)||(13404266-13404360)
chr6 (144-242)||(14124124-14124222)
chr6 (144-242)||(14124259-14124357)
chr6 (148-242)||(32026286-32026380)
chr6 (144-242)||(34801834-34801932)
chr6 (166-242)||(35019928-35020004)
chr6 (144-209)||(29076002-29076067)
chr6 (144-209)||(29110974-29111039)
chr6 (144-207)||(13616571-13616634)
chr6 (144-207)||(29067952-29068015)
chr6 (144-207)||(29083198-29083261)
chr6 (144-207)||(29109541-29109604)
chr6 (197-242)||(32036394-32036439)
[»] chr2 (11 HSPs)
chr2 (144-242)||(2918023-2918121)
chr2 (144-242)||(19470280-19470378)
chr2 (144-242)||(35492975-35493073)
chr2 (144-242)||(43492907-43493005)
chr2 (165-242)||(41497804-41497881)
chr2 (144-224)||(16583246-16583326)
chr2 (144-207)||(3942859-3942922)
chr2 (144-209)||(23786451-23786516)
chr2 (144-207)||(40676073-40676136)
chr2 (144-207)||(23409193-23409256)
chr2 (144-189)||(8268449-8268494)
[»] scaffold0192 (1 HSPs)
scaffold0192 (144-242)||(16742-16840)
[»] scaffold0618 (1 HSPs)
scaffold0618 (144-242)||(4220-4318)


Alignment Details
Target: chr4 (Bit Score: 91; Significance: 4e-44; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 144 - 242
Target Start/End: Complemental strand, 37867999 - 37867901
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  37867999 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttaggtttaagtgtaggttttgatgat 37867901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 144 - 242
Target Start/End: Complemental strand, 1044273 - 1044175
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  1044273 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttaggtttaggtgtaggttttgatgat 1044175  T

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Target: chr4; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 34151943 - 34152041
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  34151943 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttaggtttaggtgtaggttttgatgat 34152041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 144 - 242
Target Start/End: Complemental strand, 56140432 - 56140334
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  56140432 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttaggtttaggtgtaggttttgatgat 56140334  T

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Target: chr4; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 144 - 242
Target Start/End: Complemental strand, 9491017 - 9490919
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||    
T  9491017 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttaggtttaggtgtacgttttgatgat 9490919  T

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Target: chr4; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 33384125 - 33384223
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33384125 aattgttagagaagttttattgaattgttaggtttaggttttgatgaattgttgtagaattgttagaattgtttagatttaggtgtaggttttgatgat 33384223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 44558984 - 44559082
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||    
T  44558984 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttaggcttaggtgtaggttttgatgat 44559082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 148 - 242
Target Start/End: Original strand, 51426862 - 51426956
Alignment:
Q  148 gttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  51426862 gttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttaggtttaggtgtaggttttgatgat 51426956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 144 - 242
Target Start/End: Complemental strand, 39590308 - 39590210
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| | ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  39590308 aattgttagaaaacttttattgaattgttaggtttaagttttgatgaatcgttgtagaattgttagaattgtttaggtttaggtgtaggttttgatgat 39590210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 4783992 - 4784090
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| |||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||  |||| |||||||||||||||||    
T  4783992 aattgttacagaagtttcattgaattgttaggtttaggttttgatgaattgttgtagaattgttagaattgtttatgtttaggtgtaggttttgatgat 4784090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 207
Target Start/End: Complemental strand, 37959462 - 37959399
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37959462 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 37959399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 207
Target Start/End: Original strand, 956120 - 956183
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  956120 aattgttagaaaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 956183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 207
Target Start/End: Complemental strand, 9718797 - 9718734
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  9718797 aattgttatagaagttttattgaattgttaggtttaggttttgatgaattgttgtagaattgtt 9718734  T

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Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 207
Target Start/End: Original strand, 34528492 - 34528555
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  34528492 aattgttagagaacttttattgaattgttaggtttagattttgatgaatcgttgtagaattgtt 34528555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 207
Target Start/End: Original strand, 49422425 - 49422488
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  49422425 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgcagaattgtt 49422488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 165 - 242
Target Start/End: Original strand, 6281212 - 6281289
Alignment:
Q  165 gaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||||||||||| ||||||| ||||||||||||||| |||||||||||||  |||| |||||||||||||||||    
T  6281212 gaattgttaggtttagattttgataaatcgttgtagaattcttagaattgtttatgtttaggtgtaggttttgatgat 6281289  T

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Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 144 - 207
Target Start/End: Complemental strand, 49572640 - 49572577
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    |||||||| |||||||||||||||||||||| |||| ||||||||||||||||||| |||||||    
T  49572640 aattgttagagaacttttattgaattgttagttttatgttttgatgaatcgttgtataattgtt 49572577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Original strand, 4910130 - 4910168
Alignment:
Q  171 ttaggtttaggttttgatgaatcgttgtagaattgttag 209  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  4910130 ttaggtttagcttttgatgaattgttgtagaattgttag 4910168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 198 - 234
Target Start/End: Complemental strand, 9718849 - 9718813
Alignment:
Q  198 tagaattgttagaattgtttagatttaagtgtaggtt 234  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  9718849 tagaattgttagaattgtttaggtttaagtttaggtt 9718813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 4e-44; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 144 - 242
Target Start/End: Complemental strand, 13974477 - 13974379
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  13974477 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaggtgtaggttttgatgat 13974379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 14172418 - 14172516
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  14172418 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatcggtgtagaattgttagaattgtttagatttaggtgtaggttttgatgat 14172516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 144 - 242
Target Start/End: Complemental strand, 51271353 - 51271255
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  51271353 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttaggtttatgtgtaggttttgatgat 51271255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 46142106 - 46142204
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  46142106 aattgttagagaactttcattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttaggtttaggtgtaggttttgatgat 46142204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 29760849 - 29760948
Alignment:
Q  144 aattgttatagaactttt-attgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  29760849 aattgttagagaactttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttaggtttaggtgtaggttttgatgat 29760948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 24362734 - 24362832
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||| |||||||||||||||||    
T  24362734 aattgttatagaagttttattgaattgttaggtttaggttttgatgaattgttgtagaattgttagaattgattaggtttaggtgtaggttttgatgat 24362832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 27485377 - 27485475
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||    
T  27485377 aattgttagagaacttttattgaattgttaggtttaagttttgatgaatcgttgtagaattgttagaattgtttaggtttaggtgtaagttttgatgat 27485475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 42570443 - 42570541
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||    
T  42570443 aattgttaaataacttttattgaattgttaagtttaggttttgatgaatcgttgtagaattgttagaattgtttaggtttaggtgtaagttttgatgat 42570541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 144 - 242
Target Start/End: Complemental strand, 41803776 - 41803678
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||  |||| |||||||||||||||||    
T  41803776 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaactgttacaattttttatgtttaggtgtaggttttgatgat 41803678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 165 - 242
Target Start/End: Complemental strand, 29437461 - 29437384
Alignment:
Q  165 gaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  29437461 gaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttaggtttaggtgtaggttttgatgat 29437384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 155 - 242
Target Start/End: Complemental strand, 49398188 - 49398101
Alignment:
Q  155 aacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||| ||||  ||||||||||||||||    
T  49398188 aacttttattgaattgttagatttaggttttgatgaatcgttatagaattgttaggattgtttaggtttagatgtaggttttgatgat 49398101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 207
Target Start/End: Complemental strand, 18974858 - 18974795
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18974858 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 18974795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 207
Target Start/End: Original strand, 26633870 - 26633933
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26633870 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 26633933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 207
Target Start/End: Complemental strand, 36911423 - 36911360
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36911423 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 36911360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 178 - 242
Target Start/End: Complemental strand, 49428859 - 49428795
Alignment:
Q  178 taggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    ||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||    
T  49428859 taggttttgatgaatcgttttagaattgttagaattgtttaggtttaagtgtaggttttgatgat 49428795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 207
Target Start/End: Complemental strand, 6437260 - 6437197
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6437260 aattgttagtgaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 6437197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 144 - 207
Target Start/End: Original strand, 44336583 - 44336646
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    |||||||| |||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  44336583 aattgttagagaatttttattgaattgttaggtttaagttttgatgaatcgttgtagaattgtt 44336646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 148 - 207
Target Start/End: Complemental strand, 48228051 - 48227992
Alignment:
Q  148 gttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  48228051 gttagagaacttttattgaattgttaggtttaggttttgatgaatcgttttagaattgtt 48227992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 13148782 - 13148734
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaat 192  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||    
T  13148782 aattgttatagaagttttattgaattgataggtttaggttttgatgaat 13148734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 198 - 241
Target Start/End: Complemental strand, 49428890 - 49428847
Alignment:
Q  198 tagaattgttagaattgtttagatttaagtgtaggttttgatga 241  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  49428890 tagaattgttagaattgtttaggtttaagtgtaggttttgatga 49428847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 188 - 242
Target Start/End: Complemental strand, 26494949 - 26494895
Alignment:
Q  188 tgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    ||||| |||||||||||||||||||||||||| |||| ||||| |||||||||||    
T  26494949 tgaattgttgtagaattgttagaattgtttaggtttaggtgtatgttttgatgat 26494895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 200
Target Start/End: Original strand, 49925206 - 49925241
Alignment:
Q  165 gaattgttaggtttaggttttgatgaatcgttgtag 200  Q
    ||||||||||||||||||||||||||||||||||||    
T  49925206 gaattgttaggtttaggttttgatgaatcgttgtag 49925241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 216
Target Start/End: Original strand, 14771437 - 14771478
Alignment:
Q  175 gtttaggttttgatgaatcgttgtagaattgttagaattgtt 216  Q
    |||||||||||||||||| |||||| ||||||||||||||||    
T  14771437 gtttaggttttgatgaattgttgtaaaattgttagaattgtt 14771478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 171 - 208
Target Start/End: Original strand, 14771565 - 14771602
Alignment:
Q  171 ttaggtttaggttttgatgaatcgttgtagaattgtta 208  Q
    ||||||||| |||||||||||| |||||||||||||||    
T  14771565 ttaggtttacgttttgatgaattgttgtagaattgtta 14771602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 242
Target Start/End: Complemental strand, 48228002 - 48227966
Alignment:
Q  206 ttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||||||||| |||| |||||||||||||||||    
T  48228002 ttagaattgtttaggtttaggtgtaggttttgatgat 48227966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 87; Significance: 9e-42; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 144 - 242
Target Start/End: Complemental strand, 11348232 - 11348134
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  11348232 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttaggtttaggtgtaggttttgatgat 11348134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 144 - 242
Target Start/End: Complemental strand, 30887165 - 30887067
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  30887165 aattgttagagaacttttattgaattgttagatttaggttttgatgaatcgttgtagaattgttagaattgtttaggtttaagtgtaggttttgatgat 30887067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 1398966 - 1399064
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||    
T  1398966 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatagttgtagaattgttagaattgtttaggtttaggtgtaggttttgatgat 1399064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 144 - 242
Target Start/End: Complemental strand, 3602889 - 3602791
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||    
T  3602889 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttacaattgtttaggtttaggtgtaggttttgatgat 3602791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 34682576 - 34682674
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  34682576 aattgttagagaatttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttaggtttaggtgtaggttttgatgat 34682674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 41202061 - 41202159
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||| |||||||||||    
T  41202061 aattcttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgatagaattgtttaggtttaggtgtatgttttgatgat 41202159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 144 - 242
Target Start/End: Complemental strand, 18309802 - 18309705
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| |||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  18309802 aattgttagagaacttttatttaattgttaggtttagattt-gatgaatcgttgtagaattgttagaattgtttaggtttaggtgtaggttttgatgat 18309705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 168 - 242
Target Start/End: Original strand, 35926760 - 35926834
Alignment:
Q  168 ttgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||  ||||||||||||||||    
T  35926760 ttgttaggtttaggttttgatgaattgttgtagaattgttagaattgtttagttttagatgtaggttttgatgat 35926834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 207
Target Start/End: Original strand, 541258 - 541321
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  541258 aattgttagagaaattttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 541321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 144 - 207
Target Start/End: Complemental strand, 20199887 - 20199824
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  20199887 aattgttagagaacttttattgaattgttaggtttaggttttgatgaataggtgtagaattgtt 20199824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 144 - 207
Target Start/End: Complemental strand, 25499620 - 25499557
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    |||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  25499620 aattgttagagaacttttattgaattgttagatttagattttgatgaatcgttgtagaattgtt 25499557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 144 - 207
Target Start/End: Original strand, 41799162 - 41799225
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  41799162 aattgttagagaacttttattgaattgttaggtttagattttgatgaatcgttgtagaactgtt 41799225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 147 - 207
Target Start/End: Complemental strand, 35566802 - 35566742
Alignment:
Q  147 tgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    ||||| |||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  35566802 tgttagagaactcttattcaattgttaggtttaggttttgataaatcgttgtagaattgtt 35566742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 178
Target Start/End: Complemental strand, 8539274 - 8539240
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggttt 178  Q
    |||||||| ||||||||||||||||||||||||||    
T  8539274 aattgttagagaacttttattgaattgttaggttt 8539240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 175 - 208
Target Start/End: Complemental strand, 23190537 - 23190504
Alignment:
Q  175 gtttaggttttgatgaatcgttgtagaattgtta 208  Q
    |||||||||||||||||| |||||||||||||||    
T  23190537 gtttaggttttgatgaattgttgtagaattgtta 23190504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 87; Significance: 9e-42; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 45099130 - 45099228
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  45099130 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttaggtttaggtgtaggttttgatgat 45099228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 144 - 240
Target Start/End: Original strand, 51694213 - 51694309
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatg 240  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  51694213 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttaggtttaggtgtaggttttgatg 51694309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 144 - 242
Target Start/End: Complemental strand, 7247602 - 7247504
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  7247602 aattgttagagaacctttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttaggtttaggtgtaggttttgatgat 7247504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 144 - 242
Target Start/End: Complemental strand, 43571426 - 43571328
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||    
T  43571426 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttataattgtttaggtttaggtgtaggttttgatgat 43571328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 34691962 - 34692060
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| |||| |||||||||||||||||    
T  34691962 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatcattgcagaattgttagaattgtttaggtttaggtgtaggttttgatgat 34692060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 144 - 242
Target Start/End: Complemental strand, 43478562 - 43478464
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||| |||||    
T  43478562 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttacgtttaggtgtaggttttaatgat 43478464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 147 - 242
Target Start/End: Original strand, 49217417 - 49217512
Alignment:
Q  147 tgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| |||||| ||||||||||    
T  49217417 tgttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgcagaattgttagaattgtttaggtttaggtgtagattttgatgat 49217512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 20374636 - 20374734
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || | |||| ||||||||||||    
T  20374636 aattgttatagaagttttattgaattgttaggtttaggttttgatgaatggttgtagaattgttagaattgtttaggttcaggtgttggttttgatgat 20374734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 46345268 - 46345366
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||  |||||||||||||||||    
T  46345268 aattgttagataacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaaatgtttaggtttgggtgtaggttttgatgat 46345366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 24701054 - 24701152
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| |||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||| |||| |||||| ||||||||||    
T  24701054 aattgttagagaacttttattgaattgttaggtttagattttgattaatcgttgtataattgttagaattgtttaggtttaggtgtagtttttgatgat 24701152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 165 - 242
Target Start/End: Original strand, 55205624 - 55205701
Alignment:
Q  165 gaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  55205624 gaattgttaagtttaggttttgatgaatcgttgtagaattgttagaattgtttaggtttaagtgtaggttttgatgat 55205701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 144 - 242
Target Start/End: Complemental strand, 49611688 - 49611590
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||| || || |||||||||||    
T  49611688 aattgttagagaactttttttgaattgttaggtttaggttttgatgaatccttgtagaattgttagaattttttaggtttaggtataagttttgatgat 49611590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 44223350 - 44223415
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttag 209  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44223350 aattgttaaagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttag 44223415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 238
Target Start/End: Complemental strand, 2430009 - 2429921
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttga 238  Q
    |||||||| ||||||||||||||||||||||||||      ||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  2430009 aattgttagagaacttttattgaattgttaggttt------tgatgaatcgttgtagaattgttagaattgtttaggtttaggtgtaggttttga 2429921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 207
Target Start/End: Original strand, 52568107 - 52568170
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52568107 aattgttaaagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 52568170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 207
Target Start/End: Original strand, 13894574 - 13894637
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13894574 aattgttagagaacttttattgaattgttagatttaggttttgatgaatcgttgtagaattgtt 13894637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 144 - 207
Target Start/End: Complemental strand, 41579464 - 41579401
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  41579464 aattgttagagaacttttattgaattgttaggcttaggttttgatgaatcgttatagaattgtt 41579401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 192
Target Start/End: Original strand, 44490660 - 44490708
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaat 192  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||    
T  44490660 aattgttagagaacttttattgaattgttaggtttaggttttgatgaat 44490708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 144 - 207
Target Start/End: Original strand, 34645905 - 34645972
Alignment:
Q  144 aattgttatagaacttttattg----aattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    ||||||||||||| ||||||||    ||||||||||||||||||||||||| ||||||||||||||||    
T  34645905 aattgttatagaagttttattgattgaattgttaggtttaggttttgatgattcgttgtagaattgtt 34645972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 207
Target Start/End: Original strand, 55267770 - 55267811
Alignment:
Q  166 aattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  55267770 aattgttaggtttaggttttgatgaatcgttgtagaattgtt 55267811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 171 - 214
Target Start/End: Original strand, 27096297 - 27096340
Alignment:
Q  171 ttaggtttaggttttgatgaatcgttgtagaattgttagaattg 214  Q
    ||||||||| |||||||||||| |||||||||||||||||||||    
T  27096297 ttaggtttatgttttgatgaattgttgtagaattgttagaattg 27096340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 178
Target Start/End: Complemental strand, 36136329 - 36136295
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggttt 178  Q
    |||||||| ||||||||||||||||||||||||||    
T  36136329 aattgttagagaacttttattgaattgttaggttt 36136295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 1e-40; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 146 - 242
Target Start/End: Complemental strand, 41276613 - 41276517
Alignment:
Q  146 ttgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  41276613 ttgttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttaggtttaggtgtaggttttgatgat 41276517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 144 - 242
Target Start/End: Complemental strand, 26455405 - 26455307
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||    
T  26455405 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttataattgtttaggtttaggtgtaggttttgatgat 26455307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 144 - 242
Target Start/End: Complemental strand, 24862886 - 24862788
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||  ||||||||||    
T  24862886 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttaggtttatgtgtaacttttgatgat 24862788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 242
Target Start/End: Complemental strand, 22550604 - 22550506
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||| ||||| |||||||||||    
T  22550604 aattgttagagaacttttattgaattgttagatttaggttttgattaatcgttgtagaattgttagaattgtttaggtttaggtgtatgttttgatgat 22550506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 144 - 219
Target Start/End: Complemental strand, 28168332 - 28168257
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttag 219  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28168332 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttag 28168257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 156 - 242
Target Start/End: Complemental strand, 44051963 - 44051877
Alignment:
Q  156 acttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||| |||| |||||| ||||||||||    
T  44051963 acttttattgaattgttaggtttaggtttagatgaatcgttgtagaattgttagaattttttaggtttaggtgtagattttgatgat 44051877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 165 - 242
Target Start/End: Original strand, 41855683 - 41855760
Alignment:
Q  165 gaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||    
T  41855683 gaattgttaggtttaggttttgatgaatcgttgtagaattgttaaaattgtttaggtttaggtgtaggttttgatgat 41855760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 165 - 242
Target Start/End: Complemental strand, 42604967 - 42604890
Alignment:
Q  165 gaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||    
T  42604967 gaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttaggtttagatgtaggttttgatgat 42604890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 207
Target Start/End: Original strand, 18438972 - 18439035
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18438972 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatcgatgtagaattgtt 18439035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 168 - 242
Target Start/End: Complemental strand, 40703878 - 40703805
Alignment:
Q  168 ttgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||  |||||||||||    
T  40703878 ttgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttaggtttaggtgt-cgttttgatgat 40703805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 144 - 207
Target Start/End: Complemental strand, 38872680 - 38872618
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    |||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  38872680 aattgttagagaacttttattgaattgttaggtt-aggttttgatgaatcgttgtagaattgtt 38872618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 14120334 - 14120296
Alignment:
Q  171 ttaggtttaggttttgatgaatcgttgtagaattgttag 209  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  14120334 ttaggtttaggttttgatgaattgttgtagaattgttag 14120296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 144 - 242
Target Start/End: Complemental strand, 3327 - 3229
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  3327 aattgttagagaacttttattgaattgttaggtttatgttttgatgaatcgttgtagaattgttagaattgtttaggtttaggtgtaggttttgatgat 3229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 178
Target Start/End: Complemental strand, 397 - 363
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggttt 178  Q
    |||||||| ||||||||||||||||||||||||||    
T  397 aattgttagagaacttttattgaattgttaggttt 363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 83; Significance: 2e-39; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 144 - 242
Target Start/End: Complemental strand, 34142402 - 34142304
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  34142402 aattgttagagaacttttattgaattgttaggtttatgttttgatgaatcgttgtagaattgttagaattgtttaggtttaggtgtaggttttgatgat 34142304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 28977891 - 28977990
Alignment:
Q  144 aattgttatagaactttt-attgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  28977891 aattgttagagaactttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttaggtttaggtgtaggttttgatgat 28977990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 146 - 242
Target Start/End: Original strand, 46860853 - 46860949
Alignment:
Q  146 ttgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||    
T  46860853 ttgttagagaacttttattgaattgttagatttaggttttgatgaatcgttgtagaattgttaaaattgtttaggtttaggtgtaggttttgatgat 46860949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 144 - 224
Target Start/End: Complemental strand, 48194374 - 48194294
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagattta 224  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  48194374 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttaggttta 48194294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 144 - 219
Target Start/End: Complemental strand, 10225607 - 10225532
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttag 219  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10225607 aattgttagataacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttag 10225532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 144 - 208
Target Start/End: Original strand, 21185955 - 21186019
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtta 208  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21185955 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtta 21186019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 207
Target Start/End: Original strand, 28113112 - 28113175
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  28113112 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgtggtagaattgtt 28113175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 207
Target Start/End: Complemental strand, 40590278 - 40590215
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40590278 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 40590215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 207
Target Start/End: Complemental strand, 42683947 - 42683884
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42683947 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 42683884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 207
Target Start/End: Original strand, 36392462 - 36392525
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  36392462 aattgttagagaacttttattgaattgttaggtttatgttttgatgaatcgttgtagaattgtt 36392525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 144 - 207
Target Start/End: Original strand, 45361969 - 45362032
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  45361969 aattgttagagaccttttattgaattgttaggtttaggttttgatgaatcattgtagaattgtt 45362032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 144 - 207
Target Start/End: Complemental strand, 48272194 - 48272130
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggttta-ggttttgatgaatcgttgtagaattgtt 207  Q
    |||||||| |||||||||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  48272194 aattgttagagaacttttattgaattgttaggtttattgttttaatgaatcgttgtagaattgtt 48272130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 144 - 207
Target Start/End: Complemental strand, 41623623 - 41623560
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    |||||||  |||||||||||| |||||| ||||||||| |||||||||||||||||||||||||    
T  41623623 aattgtttgagaacttttattaaattgtcaggtttagggtttgatgaatcgttgtagaattgtt 41623560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 209
Target Start/End: Original strand, 3379761 - 3379795
Alignment:
Q  175 gtttaggttttgatgaatcgttgtagaattgttag 209  Q
    |||||||||||||||||| ||||||||||||||||    
T  3379761 gtttaggttttgatgaattgttgtagaattgttag 3379795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 178
Target Start/End: Complemental strand, 10524058 - 10524024
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggttt 178  Q
    |||||||| ||||||||||||||||||||||||||    
T  10524058 aattgttagagaacttttattgaattgttaggttt 10524024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 178
Target Start/End: Complemental strand, 17840621 - 17840587
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggttt 178  Q
    |||||||| ||||||||||||||||||||||||||    
T  17840621 aattgttagagaacttttattgaattgttaggttt 17840587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 2e-39; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 144 - 238
Target Start/End: Complemental strand, 13404360 - 13404266
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttga 238  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||    
T  13404360 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttaggtttaggtgtaggttttga 13404266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 144 - 242
Target Start/End: Complemental strand, 14124222 - 14124124
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    ||||||||||||| |||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14124222 aattgttatagaagttttattgaattgttaggtttaggttttgaaggattgttgtagaattgttagaattgtttagatttaggtgtaggttttgatgat 14124124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 144 - 242
Target Start/End: Complemental strand, 14124357 - 14124259
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    ||||||||||||| |||||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14124357 aattgttatagaagttttattgaattgttaggtttaggttttgaaggattgttgtagaattgttagaattgtttagatttaggtgtaggttttgatgat 14124259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 148 - 242
Target Start/End: Original strand, 32026286 - 32026380
Alignment:
Q  148 gttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||    
T  32026286 gttagagaacttttattgaattgttaggtttaggttttgatgaatcgtcgtagaattgttagaattgtttaggtttaggtgtaggttttgatgat 32026380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 34801834 - 34801932
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||| |||||||||||||||||    
T  34801834 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgttgaattgttaggattgtttaggtttaggtgtaggttttgatgat 34801932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 166 - 242
Target Start/End: Original strand, 35019928 - 35020004
Alignment:
Q  166 aattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  35019928 aattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttaggtttaggtgtaggttttgatgat 35020004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 29076067 - 29076002
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttag 209  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29076067 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttag 29076002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 29111039 - 29110974
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttag 209  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29111039 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttag 29110974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 207
Target Start/End: Original strand, 13616571 - 13616634
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    |||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  13616571 aattgttagagaacatttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 13616634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 207
Target Start/End: Complemental strand, 29068015 - 29067952
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29068015 aattgttacagaacttttattgaattgttaagtttaggttttgatgaatcgttgtagaattgtt 29067952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 207
Target Start/End: Complemental strand, 29083261 - 29083198
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29083261 aattgttacagaacttttattgaattgttaagtttaggttttgatgaatcgttgtagaattgtt 29083198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 207
Target Start/End: Complemental strand, 29109604 - 29109541
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29109604 aattgttacagaacttttattgaattgttaagtttaggttttgatgaatcgttgtagaattgtt 29109541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 242
Target Start/End: Original strand, 32036394 - 32036439
Alignment:
Q  197 gtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||    
T  32036394 gtagaattgttagaattgtttaggtttaggtgtaggttttgatgat 32036439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 2e-39; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 2918023 - 2918121
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  2918023 aattgttagagaacttttattgaattgttaggttgaggttttgatgaatcgttgtagaattgttagaattgtttaggtttaggtgtaggttttgatgat 2918121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 19470280 - 19470378
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||||    
T  19470280 aattgttagagaacttttattgaattgttaggtttaggttttgatgaattgttgtagaattgttagaattgtttaggtttaggtgtaggttttgatgat 19470378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 144 - 242
Target Start/End: Complemental strand, 35493073 - 35492975
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||| |||||||||||||||||    
T  35493073 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattattataattgtttagttttaggtgtaggttttgatgat 35492975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 144 - 242
Target Start/End: Complemental strand, 43493005 - 43492907
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  43493005 aattgttagagatcttttattgaattgttaggtttagattttgatgaatcgttgtagaattgttagaattgtttaggtttaggtgtaggttttgatgat 43492907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 165 - 242
Target Start/End: Original strand, 41497804 - 41497881
Alignment:
Q  165 gaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||||    
T  41497804 gaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttaggtttaggtgtagattttgatgat 41497881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 144 - 224
Target Start/End: Complemental strand, 16583326 - 16583246
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagattta 224  Q
    |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||| ||||    
T  16583326 aattgttagagaacttttatttaattgttaggtttaggttttgatgaatcgttgtagaattgtaagaatagtttaggttta 16583246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 207
Target Start/End: Complemental strand, 3942922 - 3942859
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3942922 aattgttagagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 3942859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 144 - 209
Target Start/End: Original strand, 23786451 - 23786516
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttag 209  Q
    |||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  23786451 aattgttagagaacttttattgaattgttagatttaggttttgatgaatcgttgtagaattgttag 23786516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 207
Target Start/End: Original strand, 40676073 - 40676136
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  40676073 aattgttagagaacttttattgaattgttaggtttacgttttgatgaatcgttgtagaattgtt 40676136  T

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Target: chr2; HSP #10
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 144 - 207
Target Start/End: Complemental strand, 23409256 - 23409193
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgtt 207  Q
    |||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||    
T  23409256 aattgttagagaactttgattgaactgttaggtttaggttttgatgaatcgttgtagaattgtt 23409193  T

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Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 189
Target Start/End: Complemental strand, 8268494 - 8268449
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatg 189  Q
    |||||||| |||||||||||||||||||||||||||||||||||||    
T  8268494 aattgttagagaacttttattgaattgttaggtttaggttttgatg 8268449  T

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Target: scaffold0192 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 16742 - 16840
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||    
T  16742 aattgttagagaaattttattaaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttaggtttaggtgtaggttttgatgat 16840  T

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Target: scaffold0618 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 144 - 242
Target Start/End: Original strand, 4220 - 4318
Alignment:
Q  144 aattgttatagaacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaattgtttagatttaagtgtaggttttgatgat 242  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||  |||||||||||||||||    
T  4220 aattgttagataacttttattgaattgttaggtttaggttttgatgaatcgttgtagaattgttagaaatgtttaggtttgggtgtaggttttgatgat 4318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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