View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2690_high_10 (Length: 253)
Name: NF2690_high_10
Description: NF2690
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2690_high_10 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 13 - 253
Target Start/End: Original strand, 6936873 - 6937114
Alignment:
| Q |
13 |
aatatagtcaattagtcat-aacttcatacctagtaatttgtattatccacaaaaattgcatggtaaaagaaataagcatatcccatgatagtgaaaatt |
111 |
Q |
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| T |
6936873 |
aatatagtcaattagtcattaacttcatacctagtaatttgtattatccacaaaaattgcatggtaaaagaaataagcatatcccatgatagtgaaaatt |
6936972 |
T |
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| Q |
112 |
atgatatccctaatagaccagatggaatattcaccaaattagtgcatgtttggattgacaatgaggtctgacatgattacagtgtgccaccgtgattttg |
211 |
Q |
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|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
6936973 |
atgatatccctaatagaccaaatggaatattcaccaaattagtgcatgtttggattgacaatgaggtctgacatgattacattgtgccaccgtgattttg |
6937072 |
T |
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| Q |
212 |
taaaaagctagatgcttcaacaaaatcacgacatcactgtga |
253 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
6937073 |
taaaaagctagatgcttcaacaaaatcacgacatcactgtga |
6937114 |
T |
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