View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2690_high_9 (Length: 268)
Name: NF2690_high_9
Description: NF2690
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2690_high_9 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 20 - 259
Target Start/End: Complemental strand, 3732965 - 3732725
Alignment:
| Q |
20 |
gctcatagataaaacgaatatatggtacatgttaatattgtgacactactattttagccacgccaaaacattagttcaggtagattcaaaatagttttga |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3732965 |
gctcatagataaaacgaatatatggtacatgttaatattgtgacactactattttagccacgccaaaacattagttcaggtagattcaaaatagttttga |
3732866 |
T |
|
| Q |
120 |
agaaatctttcatgaatacaagttgagtttacctagttcaaatctaactgttttatttcaacaacaaaataatatctaattac-aattcgtattctaaat |
218 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
3732865 |
agaaatctttcatgaatacaagttgagcttacctagttcaaatctaactgttttatttcaacaacaaaataatatctaattacaaattcgtattctaaat |
3732766 |
T |
|
| Q |
219 |
aaaattagcaaaggaaaatcatttcaacatttaagtattat |
259 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3732765 |
aaaattagcaaaggaaaatcatttcaacatttaagtattat |
3732725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University