View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2690_low_8 (Length: 292)
Name: NF2690_low_8
Description: NF2690
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2690_low_8 |
 | |
|
| [»] scaffold0194 (1 HSPs) |
| | |
|
| [»] scaffold0097 (1 HSPs) |
| | |
|
| [»] scaffold0238 (1 HSPs) |
| | |
|
| [»] scaffold0544 (1 HSPs) |
| | |
|
| [»] scaffold0337 (1 HSPs) |
| | |
|
| [»] scaffold0189 (1 HSPs) |
| | |
|
Alignment Details
Target: chr8 (Bit Score: 158; Significance: 4e-84; HSPs: 15)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 18 - 285
Target Start/End: Complemental strand, 15260968 - 15260689
Alignment:
| Q |
18 |
ataatgaagttgattaatgtttgatgccagaagacactccctcgtgtgagaggcaaaagttatggtgcataaggaaatcc----tgcaccgtgcataaac |
113 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | | |||||||||||||||| |
|
|
| T |
15260968 |
ataatgaagttgattaatgtttgatgccagaagacacttcctcgtgtgagaggcaaaagttatggtgcataaggattttccttatgcaccgtgcataaac |
15260869 |
T |
|
| Q |
114 |
acttcacaatcatcagattaagtgtacacgtgtaataat--------tttaaaactacaccagatcaaacttcatttgtttcaaacatttctctcactaa |
205 |
Q |
| |
|
||||||||| ||||| || ||||||||||| ||||||| | | ||||||||||| ||||||||||||||| |||||| |||||||||||||| |
|
|
| T |
15260868 |
acttcacaaccatcaaatctagtgtacacgtttaataatccaaggcttctcaaactacaccaaatcaaacttcatttgcttcaaatatttctctcactaa |
15260769 |
T |
|
| Q |
206 |
aacataaagctcgccctctctctctacaattttcaacattatgaaaaagaaaacgaagaactcagatgagtcttcatctc |
285 |
Q |
| |
|
|| ||||| ||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
15260768 |
aatataaaactctccctctctctctacaattttcaacattctggaaaagaaaacgaagaactcagatgagtcttcatctc |
15260689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 69 - 285
Target Start/End: Original strand, 39021975 - 39022202
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta--------a |
157 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| |||||||||| || | |
|
|
| T |
39021975 |
ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaatcatcagatctagtgtacatgtgtaataatcctaggcttctca |
39022074 |
T |
|
| Q |
158 |
aactacaccagatcaaacttcatttgtttcaaacatttctctcactaaaacataaagctcgccctctctctctacaattttcaacattatgaaaaagaaa |
257 |
Q |
| |
|
|||||||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||| |
|
|
| T |
39022075 |
aactacaccaaatcaaacttcatttgcttcaaacatttatctcactaaaacataaagctctccctctctctctacaattttcaacattctggaaaagaaa |
39022174 |
T |
|
| Q |
258 |
acgaagaactcagatgagtcttcatctc |
285 |
Q |
| |
|
|||||||||| ||||||||||||||||| |
|
|
| T |
39022175 |
acgaagaacttagatgagtcttcatctc |
39022202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 69 - 284
Target Start/End: Complemental strand, 32987510 - 32987286
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta--------a |
157 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||| || | |
|
|
| T |
32987510 |
ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctca |
32987411 |
T |
|
| Q |
158 |
aactacaccagatcaaacttcatttgtttcaaacatttctctcactaaaacataaagctcgccctctctctctacaattttcaacattatgaaaaagaaa |
257 |
Q |
| |
|
|||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||| || |||||||| |
|
|
| T |
32987410 |
aactacaccaaatcaaacttcatttgcttcaaacatttctctaactaaaacataaagctctcc--ctctctctacaattttcaacattctggaaaagaaa |
32987313 |
T |
|
| Q |
258 |
acgaagaactcagatgagtcttcatct |
284 |
Q |
| |
|
|||||||||||| |||||||||||||| |
|
|
| T |
32987312 |
acgaagaactcatatgagtcttcatct |
32987286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 73 - 236
Target Start/End: Complemental strand, 4836762 - 4836588
Alignment:
| Q |
73 |
aaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataat--------tttaaaact |
161 |
Q |
| |
|
||||||||||||||||| ||||| || |||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||| ||||| |
|
|
| T |
4836762 |
aaagttatggtgcataaagaaatgcttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaagcttttcaaact |
4836663 |
T |
|
| Q |
162 |
acaccagatcaaacttcatttgtttcaaacatttctctcactaaaacataaagctcgccctctctctctacaatt |
236 |
Q |
| |
|
|||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
4836662 |
acaccaaatcaaacttcatttgcttcaaacatttatctcactaaaacataaagctctccctctctctctacaatt |
4836588 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 73 - 236
Target Start/End: Complemental strand, 4842207 - 4842033
Alignment:
| Q |
73 |
aaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataat--------tttaaaact |
161 |
Q |
| |
|
||||||||||||||||| ||||| || |||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||| ||||| |
|
|
| T |
4842207 |
aaagttatggtgcataaagaaatgcttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaagcttttcaaact |
4842108 |
T |
|
| Q |
162 |
acaccagatcaaacttcatttgtttcaaacatttctctcactaaaacataaagctcgccctctctctctacaatt |
236 |
Q |
| |
|
|||||| ||||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
4842107 |
acaccaaatcaaacttcatttgcttcaaacatttatctcactaaaacataaagctctccctctctctctacaatt |
4842033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 69 - 236
Target Start/End: Original strand, 7058114 - 7058292
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta--------a |
157 |
Q |
| |
|
||||||||||||||||||||||||||| || |||||||||||||||||||||||| |||| ||| ||||||||||||||||||| || | |
|
|
| T |
7058114 |
ggcaaaagttatggtgcataaggaaatacttatgcaccgtgcataaacacttcacaaccatccgatctagtgtacacgtgtaataatcctagacttctca |
7058213 |
T |
|
| Q |
158 |
aactacaccagatcaaacttcatttgtttcaaacatttctctcactaaaacataaagctcgccctctctctctacaatt |
236 |
Q |
| |
|
|||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
7058214 |
aactacaccaaatcaaacttcatttgcttcaaacacttctctcactaaaacataaagctctccctctctctctacaatt |
7058292 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 98 - 236
Target Start/End: Original strand, 8550536 - 8550682
Alignment:
| Q |
98 |
tgcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataattttaa--------aactacaccagatcaaacttcatttgtttcaa |
189 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||| || ||||||| ||||||||||||||| ||||| |
|
|
| T |
8550536 |
tgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcataagcttctcaaattacaccaaatcaaacttcatttgcttcaa |
8550635 |
T |
|
| Q |
190 |
acatttctctcactaaaacataaagctcgccctctctctctacaatt |
236 |
Q |
| |
|
||||||||||||||||||||||||| || |||||| ||||||||||| |
|
|
| T |
8550636 |
acatttctctcactaaaacataaagttctccctctttctctacaatt |
8550682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 1208709 - 1208795
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataat |
152 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||| |||| ||| |||| ||||||||||||||||||| |
|
|
| T |
1208709 |
ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacactttacaaccataagatctagtgtacacgtgtaataat |
1208795 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 2750124 - 2750205
Alignment:
| Q |
157 |
aaactacaccagatcaaacttcatttgtttcaaacatttctctcactaaaacataaagctcgccct--ctctctctacaatt |
236 |
Q |
| |
|
||||||||||| |||||||||||||| || ||||||||||||||||||||||||| |||| |||| |||||||||||||| |
|
|
| T |
2750124 |
aaactacaccaaatcaaacttcatttactttaaacatttctctcactaaaacataatgctctccctcactctctctacaatt |
2750205 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 42433701 - 42433767
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcc---tgcaccgtgcataaacacttcacaatcatcagatt |
132 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||| |
|
|
| T |
42433701 |
ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataagcacttcacaaccatcagatt |
42433767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 197
Target Start/End: Original strand, 7614100 - 7614207
Alignment:
| Q |
98 |
tgcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataa--------ttttaaaactacaccagatcaaacttcatttgtttcaa |
189 |
Q |
| |
|
|||||| |||||||||||||||||| |||||||| | |||||||||||||||| || | ||||||||||| ||||||||||||||| ||||| |
|
|
| T |
7614100 |
tgcaccatgcataaacacttcacaaccatcagatctaatgtacacgtgtaataatcataggcttctcaaactacaccaaatcaaacttcatttgcttcaa |
7614199 |
T |
|
| Q |
190 |
acatttct |
197 |
Q |
| |
|
|||||||| |
|
|
| T |
7614200 |
acatttct |
7614207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 228
Target Start/End: Original strand, 1208829 - 1208871
Alignment:
| Q |
186 |
tcaaacatttctctcactaaaacataaagctcgccctctctct |
228 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
1208829 |
tcaaacatttctctcactaaaacataaagctctccctctctct |
1208871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 152
Target Start/End: Original strand, 15181823 - 15181877
Alignment:
| Q |
98 |
tgcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataat |
152 |
Q |
| |
|
|||||| |||||||||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
15181823 |
tgcaccctgcataaacacttcacaagcatcagatctagtgtacacgtgtaataat |
15181877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 132
Target Start/End: Original strand, 41451099 - 41451172
Alignment:
| Q |
63 |
gtgagaggcaaaagttatggtgcataaggaaatcc----tgcaccgtgcataaacacttcacaatcatcagatt |
132 |
Q |
| |
|
|||| ||||||||||||||||||||||| | | | |||||||||||||||||| |||||||||||||||| |
|
|
| T |
41451099 |
gtgataggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacgtcacaatcatcagatt |
41451172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 113 - 152
Target Start/End: Original strand, 1671850 - 1671889
Alignment:
| Q |
113 |
cacttcacaatcatcagattaagtgtacacgtgtaataat |
152 |
Q |
| |
|
|||||||||||||||||||| |||||| |||||||||||| |
|
|
| T |
1671850 |
cacttcacaatcatcagatttagtgtatacgtgtaataat |
1671889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 126; Significance: 5e-65; HSPs: 14)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 69 - 285
Target Start/End: Original strand, 18056784 - 18057009
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta--------a |
157 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||| || | |
|
|
| T |
18056784 |
ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctca |
18056883 |
T |
|
| Q |
158 |
aactacaccagatcaaacttcatttgtttcaaacatttctctcactaaaacataaagctcgccctctctctctacaattttcaacattatgaaaaagaaa |
257 |
Q |
| |
|
|||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||| || |||||||| |
|
|
| T |
18056884 |
aactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaaactctcc--ctctctctacaattttcaacattctggaaaagaaa |
18056981 |
T |
|
| Q |
258 |
acgaagaactcagatgagtcttcatctc |
285 |
Q |
| |
|
|||||||||||||||||||||| ||||| |
|
|
| T |
18056982 |
acgaagaactcagatgagtctttatctc |
18057009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 67 - 285
Target Start/End: Original strand, 45889594 - 45889823
Alignment:
| Q |
67 |
gaggcaaaagttatggtgcataaggaaatcctg---caccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta------- |
156 |
Q |
| |
|
|||||||||| |||||||||||||||||| || ||||||||||||||| || |||| |||||||| ||| |||| |||||||||| ||| |
|
|
| T |
45889594 |
gaggcaaaaggtatggtgcataaggaaattcttatccaccgtgcataaacattttacaaccatcagatctagtatacatgtgtaataatcttaggcttct |
45889693 |
T |
|
| Q |
157 |
-aaactacaccagatcaaacttcatttgtttcaaacatttctctcactaaaacataaagctcgccctctctctctacaattttcaacattatgaaaaaga |
255 |
Q |
| |
|
||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||| ||||||||| |
|
|
| T |
45889694 |
caaactacaccaaatcaaatttcatttccttcaaacatttctctcactaaaacataaagttctccctctctctctacaattttcaatattctgaaaaaga |
45889793 |
T |
|
| Q |
256 |
aaacgaagaactcagatgagtcttcatctc |
285 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
45889794 |
aaacgaagaactcagatgagtcttcatctc |
45889823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 105 - 285
Target Start/End: Complemental strand, 23320111 - 23319923
Alignment:
| Q |
105 |
tgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta--------aaactacaccagatcaaacttcatttgtttcaaacatttc |
196 |
Q |
| |
|
|||||||||||||||||| |||||||| ||||||||||||||||||| || ||||||||||| ||||||||||||||| || ||||||||| |
|
|
| T |
23320111 |
tgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctagacttctcaaactacaccaaatcaaacttcatttgctttaaacatttc |
23320012 |
T |
|
| Q |
197 |
tctcactaaaacataaagctcgccctctctctctacaattttcaacattatgaaaaagaaaacgaagaactcagatgagtcttcatctc |
285 |
Q |
| |
|
|||||||||||||||||||| |||||| ||||||| |||||||| ||| || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
23320011 |
tctcactaaaacataaagctatccctctttctctactattttcaaaattctggaaaagaaaacgaagaactcagatgagtcttcatctc |
23319923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 69 - 236
Target Start/End: Original strand, 22348039 - 22348217
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta--------a |
157 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||| || ||||||||||||||||||| || | |
|
|
| T |
22348039 |
ggcaaaagttatggtgcataaggaaatccttatgcaccgcgcataaacacttcacaaccatcatatctagtgtacacgtgtaataatcctaggcttctca |
22348138 |
T |
|
| Q |
158 |
aactacaccagatcaaacttcatttgtttcaaacatttctctcactaaaacataaagctcgccctctctctctacaatt |
236 |
Q |
| |
|
|||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
22348139 |
aactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagctctccctctctctctacaatt |
22348217 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 104 - 236
Target Start/End: Original strand, 179646 - 179786
Alignment:
| Q |
104 |
gtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataat--------tttaaaactacaccagatcaaacttcatttgtttcaaacattt |
195 |
Q |
| |
|
||||||||||||||||||| |||||||| ||||||||||||||||||| | | ||||||||||| ||||||||||||||| || |||||||| |
|
|
| T |
179646 |
gtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcccaagcttctcaaactacaccaaatcaaacttcatttgcttaaaacattt |
179745 |
T |
|
| Q |
196 |
ctctcactaaaacataaagctcgccctctctctctacaatt |
236 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
179746 |
ctctcactaaaacataaagctctccctctctctctacaatt |
179786 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 105 - 230
Target Start/End: Complemental strand, 8402337 - 8402204
Alignment:
| Q |
105 |
tgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta--------aaactacaccagatcaaacttcatttgtttcaaacatttc |
196 |
Q |
| |
|
||||||||||||||| || |||||||| ||||||||| ||||||||| || |||||| |||| |||||||||||| || |||||||||||| |
|
|
| T |
8402337 |
tgcataaacacttcataaccatcagatctagtgtacacatgtaataatcctaggtttctcaaactaaaccaaatcaaacttcatctgcttcaaacatttc |
8402238 |
T |
|
| Q |
197 |
tctcactaaaacataaagctcgccctctctctct |
230 |
Q |
| |
|
||||||||||||||||||||| | |||||||||| |
|
|
| T |
8402237 |
tctcactaaaacataaagctctctctctctctct |
8402204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 16115851 - 16115937
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataat |
152 |
Q |
| |
|
|||||||||||| |||||||||||||||| |||||||||||||||||||||||| ||||| || | ||||||||||||||||| |
|
|
| T |
16115851 |
ggcaaaagttatcatgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcaaatctaatgtacacgtgtaataat |
16115937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 153
Target Start/End: Original strand, 37639374 - 37639429
Alignment:
| Q |
98 |
tgcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatt |
153 |
Q |
| |
|
|||||| |||||||||||||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
37639374 |
tgcaccctgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatt |
37639429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 197
Target Start/End: Original strand, 30802437 - 30802535
Alignment:
| Q |
107 |
cataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta--------aaactacaccagatcaaacttcatttgtttcaaacatttct |
197 |
Q |
| |
|
|||||||| ||||||| |||||||| ||||||||||||||||||| ||| ||||||||||| ||||||||||||||| |||||| |||||| |
|
|
| T |
30802437 |
cataaacatttcacaaccatcagatctagtgtacacgtgtaataatcttaggcttctcaaactacaccaaatcaaacttcatttgcttcaaatatttct |
30802535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 35198214 - 35198160
Alignment:
| Q |
98 |
tgcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataat |
152 |
Q |
| |
|
|||||| ||||||||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
35198214 |
tgcaccctgcataaacacttcacagccatcagatctagtgtacacgtgtaataat |
35198160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 132
Target Start/End: Complemental strand, 23921963 - 23921897
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcc---tgcaccgtgcataaacacttcacaatcatcagatt |
132 |
Q |
| |
|
|||||||||||| |||||||||||||||| |||| ||||||||| ||||||| || ||||||||| |
|
|
| T |
23921963 |
ggcaaaagttattgtgcataaggaaatccttatgcatcgtgcataagcacttcataaccatcagatt |
23921897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 132
Target Start/End: Original strand, 11421627 - 11421661
Alignment:
| Q |
98 |
tgcaccgtgcataaacacttcacaatcatcagatt |
132 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| |
|
|
| T |
11421627 |
tgcaccgtgcataaacacttcacaaccatcagatt |
11421661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 132
Target Start/End: Original strand, 34369693 - 34369727
Alignment:
| Q |
98 |
tgcaccgtgcataaacacttcacaatcatcagatt |
132 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| |
|
|
| T |
34369693 |
tgcaccgtgcataaacacttcacaaccatcagatt |
34369727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 98
Target Start/End: Complemental strand, 23320158 - 23320129
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcct |
98 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
23320158 |
ggcaaaagttatggtgcataaggaaatcct |
23320129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 125; Significance: 2e-64; HSPs: 17)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 69 - 285
Target Start/End: Original strand, 21097140 - 21097367
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataattttaa-------- |
157 |
Q |
| |
|
||||||||||| ||||||||||||||||| |||||||| ||||||||||||||| ||| |||| ||| |||||||||||||||| ||| |
|
|
| T |
21097140 |
ggcaaaagttaccgtgcataaggaaatccttatgcaccgtgtataaacacttcacaaccattagatctagtttacacgtgtaataattctaagcttatta |
21097239 |
T |
|
| Q |
158 |
aactacaccagatcaaacttcatttgtttcaaacatttctctcactaaaacataaagctcgccctctctctctacaattttcaacattatgaaaaagaaa |
257 |
Q |
| |
|
|| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||| |
|
|
| T |
21097240 |
aattacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagctctccctctctctctacaattttcaacattctggaaaagaaa |
21097339 |
T |
|
| Q |
258 |
acgaagaactcagatgagtcttcatctc |
285 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
21097340 |
acgaagaactcagatgagtcttcatctc |
21097367 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 98 - 285
Target Start/End: Original strand, 4168390 - 4168585
Alignment:
| Q |
98 |
tgcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta--------aaactacaccagatcaaacttcatttgtttcaa |
189 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| ||||||||| ||||||||| || ||||||||||| ||||||||||||||||||||| |
|
|
| T |
4168390 |
tgcaccgtgcataaacacttcacaaccatcagatctagtgtacacatgtaataatcctaggtttctcaaactacaccaaatcaaacttcatttgtttcaa |
4168489 |
T |
|
| Q |
190 |
acatttctctcactaaaacataaagctcgccctctctctctacaattttcaacattatgaaaaagaaaacgaagaactcagatgagtcttcatctc |
285 |
Q |
| |
|
||||||||||||||||||||||||||| | |||| |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
4168490 |
acatttctctcactaaaacataaagctttcactctatctctacaattttcaacattctggaaaagaaaacgaagaactcagatgagtcttcatctc |
4168585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 72 - 285
Target Start/End: Complemental strand, 22181307 - 22181084
Alignment:
| Q |
72 |
aaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta--------aaac |
160 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||| ||||||||||||||||||| || |||| |
|
|
| T |
22181307 |
aaaagttatggtgcataaggaaatccttatgcaccgtgcataaaaacttcacaaccatcagatttagtgtacacgtgtaataatcctaggtttctcaaac |
22181208 |
T |
|
| Q |
161 |
tacaccagatcaaacttcatttgtttcaaacatttctctcactaaaacataaagctcgccctctctctctacaattttcaacattatgaaaaagaaaacg |
260 |
Q |
| |
|
||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| || ||||||||||| |
|
|
| T |
22181207 |
tacaccaaatcaaacttcatttgcctcaaacatttctctcactaaaacataaagcttttcctctctctctacaa-tttcaacattctggaaaagaaaacg |
22181109 |
T |
|
| Q |
261 |
aagaactcagatgagtcttcatctc |
285 |
Q |
| |
|
||||||||| |||||| |||||||| |
|
|
| T |
22181108 |
aagaactcaaatgagttttcatctc |
22181084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 69 - 285
Target Start/End: Original strand, 27764240 - 27764472
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta--------a |
157 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||| ||||||||||||||||||| || | |
|
|
| T |
27764240 |
ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcgcaaccatcagatctagtgtacacgtgtaataatcctacgcttctca |
27764339 |
T |
|
| Q |
158 |
aactacaccagatcaaacttcatttgtttcaaacatttctctcactaaaacataaag--ctcgccctctctctctacaattttcaacattatgaaaaaga |
255 |
Q |
| |
|
|||||||||| ||||||| | ||||| |||||||||||||||||||||||||||||| ||| | |||||||||| |||||||||||||| ||||||||| |
|
|
| T |
27764340 |
aactacaccaaatcaaaccttatttgcttcaaacatttctctcactaaaacataaagttctccctctctctctctccaattttcaacattctgaaaaaga |
27764439 |
T |
|
| Q |
256 |
aaac---gaagaactcagatgagtcttcatctc |
285 |
Q |
| |
|
|||| |||||| ||||||||||||||||||| |
|
|
| T |
27764440 |
aaacgaagaagaattcagatgagtcttcatctc |
27764472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 71 - 285
Target Start/End: Complemental strand, 38485733 - 38485510
Alignment:
| Q |
71 |
caaaagttatggtgcataaggaaatcctgcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta--------aaacta |
162 |
Q |
| |
|
||||||||||||||||||||||| | |||||||||||||||| |||||||| |||||||| | ||||||||||||||||| || ||| || |
|
|
| T |
38485733 |
caaaagttatggtgcataaggaatta-tgcaccgtgcataaacgcttcacaaccatcagatctaatgtacacgtgtaataatcctaggcttctcaaaata |
38485635 |
T |
|
| Q |
163 |
caccagatcaaacttcatttgtttcaaacatttctctcactaaaa--cataaagctcgccctctctctctacaattttcaacattatgaaaaagaaaacg |
260 |
Q |
| |
|
|| | ||||||||||||||| ||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||| |||||| |||| |||||| |
|
|
| T |
38485634 |
cattaaatcaaacttcatttgcttcaaacatttctctcactaaaaaacataaagatctccctctctctctacaattttcaatattatggaaaaaaaaacg |
38485535 |
T |
|
| Q |
261 |
aagaactcagatgagtcttcatctc |
285 |
Q |
| |
|
|| |||||| ||||||||||||||| |
|
|
| T |
38485534 |
aaaaactcatatgagtcttcatctc |
38485510 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 69 - 236
Target Start/End: Original strand, 45255975 - 45256155
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataa--------ttttaa |
157 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||| |||| | |
|
|
| T |
45255975 |
ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaactatcagatatagtgtacacgtgtaataatcctaggcttttca |
45256074 |
T |
|
| Q |
158 |
aactacaccagatcaaacttcatttgtttcaaacatttctctcactaaaacataaagct--cgccctctctctctacaatt |
236 |
Q |
| |
|
||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||||||| |
|
|
| T |
45256075 |
aactacatcaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagctccccccctctctctctacaatt |
45256155 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 68 - 236
Target Start/End: Complemental strand, 26447478 - 26447299
Alignment:
| Q |
68 |
aggcaaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta-------- |
156 |
Q |
| |
|
|||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||| || |
|
|
| T |
26447478 |
aggcaaaagtaatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataattctaggcttcac |
26447379 |
T |
|
| Q |
157 |
aaactacaccagatcaaacttcatttgtttcaaacatttctctcactaaaacataaagctcgccctctctctctacaatt |
236 |
Q |
| |
|
||| ||||||| |||||| |||||||| |||||||||||||||||||||||||||||| || |||||||||| ||||||| |
|
|
| T |
26447378 |
aaattacaccaaatcaaatttcatttgcttcaaacatttctctcactaaaacataaagttctccctctctctatacaatt |
26447299 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 157 - 285
Target Start/End: Original strand, 18923358 - 18923484
Alignment:
| Q |
157 |
aaactacaccagatcaaacttcatttgtttcaaacatttctctcactaaaacataaagctcgccctctctctctacaattttcaacattatgaaaaagaa |
256 |
Q |
| |
|
||||||||||| ||||||||||||||| |||||| |||||| ||||||||||||||| || |||||| ||||||||||||||||||| |||||||||| |
|
|
| T |
18923358 |
aaactacaccaaatcaaacttcatttgcttcaaatatttctgtcactaaaacataaaactatccctct--ctctacaattttcaacattctgaaaaagaa |
18923455 |
T |
|
| Q |
257 |
aacgaagaactcagatgagtcttcatctc |
285 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
18923456 |
aacgaagaactcagatgagtcttcatctc |
18923484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 98 - 228
Target Start/End: Original strand, 637886 - 638024
Alignment:
| Q |
98 |
tgcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta--------aaactacaccagatcaaacttcatttgtttcaa |
189 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| |||||||| |||||||||||||| ||||||||||| ||||||||||||||| ||||| |
|
|
| T |
637886 |
tgcaccgtgcataaacacttcacaaccatcagatctagtgtacatgtgtaataattttaggcttctcaaactacaccaaatcaaacttcatttgcttcaa |
637985 |
T |
|
| Q |
190 |
acatttctctcactaaaacataaagctcgccctctctct |
228 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
637986 |
acatttctctcactaaaacataaagctctccctctctct |
638024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 68 - 236
Target Start/End: Complemental strand, 51837156 - 51836977
Alignment:
| Q |
68 |
aggcaaaagttatggtgcataaggaaatcctg--caccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta--------a |
157 |
Q |
| |
|
||||||||||||||||| ||||| ||||||| || || ||||||| ||||||||| ||||||||| | ||||||||||||||||| || | |
|
|
| T |
51837156 |
aggcaaaagttatggtgtataagaaaatccttatcatcgagcataaatacttcacaaccatcagatttaatgtacacgtgtaataatcctaggcttctca |
51837057 |
T |
|
| Q |
158 |
aactacaccagatcaaacttcatttgt-ttcaaacatttctctcactaaaacataaagctcgccctctctctctacaatt |
236 |
Q |
| |
|
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
51837056 |
aactacaccaaatcaaacttcattttacttcaaacatttctctcactaaaacataaagctctccctctctctctacaatt |
51836977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 73 - 197
Target Start/End: Complemental strand, 36621762 - 36621627
Alignment:
| Q |
73 |
aaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataa--------ttttaaaact |
161 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| | |||||||||||||||| || | ||||| |
|
|
| T |
36621762 |
aaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctaatgtacacgtgtaataatcctatgcttcttaaact |
36621663 |
T |
|
| Q |
162 |
acaccagatcaaacttcatttgtttcaaacatttct |
197 |
Q |
| |
|
|||||| ||||||||||||||| ||||||||||||| |
|
|
| T |
36621662 |
acaccaaatcaaacttcatttgcttcaaacatttct |
36621627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 50643743 - 50643809
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcc---tgcaccgtgcataaacacttcacaatcatcagatt |
132 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||| || ||||||||| |
|
|
| T |
50643743 |
ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcataaccatcagatt |
50643809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 98 - 153
Target Start/End: Complemental strand, 50563762 - 50563707
Alignment:
| Q |
98 |
tgcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatt |
153 |
Q |
| |
|
|||||| |||||||||||||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
50563762 |
tgcaccctgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatt |
50563707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 71 - 132
Target Start/End: Complemental strand, 29826669 - 29826605
Alignment:
| Q |
71 |
caaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagatt |
132 |
Q |
| |
|
||||||||||||| |||||||||||||| ||||||||||||| |||||||||| ||||||||| |
|
|
| T |
29826669 |
caaaagttatggtacataaggaaatccttatgcaccgtgcataagcacttcacaaccatcagatt |
29826605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 152
Target Start/End: Complemental strand, 6386573 - 6386520
Alignment:
| Q |
99 |
gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataat |
152 |
Q |
| |
|
||||| |||||||||||||||||| ||||||||| |||| |||||||||||||| |
|
|
| T |
6386573 |
gcaccctgcataaacacttcacaaccatcagatttagtggacacgtgtaataat |
6386520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 100 - 142
Target Start/End: Complemental strand, 1729646 - 1729604
Alignment:
| Q |
100 |
caccgtgcataaacacttcacaatcatcagattaagtgtacac |
142 |
Q |
| |
|
||||||||||||||||||||||| |||||||| ||||||||| |
|
|
| T |
1729646 |
caccgtgcataaacacttcacaaccatcagatctagtgtacac |
1729604 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 114
Target Start/End: Complemental strand, 48077912 - 48077862
Alignment:
| Q |
67 |
gaggcaaaagttatggtgcataaggaaatcc---tgcaccgtgcataaaca |
114 |
Q |
| |
|
|||||||||||||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
48077912 |
gaggcaaaagttatcatgcataaggaaatccttatgcaccgtgcataaaca |
48077862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0194 (Bit Score: 121; Significance: 5e-62; HSPs: 1)
Name: scaffold0194
Description:
Target: scaffold0194; HSP #1
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 69 - 285
Target Start/End: Original strand, 27607 - 27834
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta--------a |
157 |
Q |
| |
|
|||||||||||||||||||||||||| || | |||||||||||||||||||||| || |||| |||||||||||||||||||| || | |
|
|
| T |
27607 |
ggcaaaagttatggtgcataaggaaaaacttatgtaccgtgcataaacacttcacaactataagatctagtgtacacgtgtaataattctaggcttctca |
27706 |
T |
|
| Q |
158 |
aactacaccagatcaaacttcatttgtttcaaacatttctctcactaaaacataaagctcgccctctctctctacaattttcaacattatgaaaaagaaa |
257 |
Q |
| |
|
|||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||| || |||||||| |
|
|
| T |
27707 |
aactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaatctctccctctttctctacaattttcaacattctggaaaagaaa |
27806 |
T |
|
| Q |
258 |
acgaagaactcagatgagtcttcatctc |
285 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
27807 |
acgaagaactcagatgagtcttcatctc |
27834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 118; Significance: 3e-60; HSPs: 17)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 69 - 285
Target Start/End: Original strand, 30428873 - 30429098
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta--------a |
157 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||| ||||||||||||||||||| || | |
|
|
| T |
30428873 |
ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacatttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctca |
30428972 |
T |
|
| Q |
158 |
aactacaccagatcaaacttcatttgtttcaaacatttctctcactaaaacataaagctcgccctctctctctacaattttcaacattatgaaaaagaaa |
257 |
Q |
| |
|
|||||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||| | |||||||| |
|
|
| T |
30428973 |
aactacaccaaatcaaacttcatttgcttcaaacatttatctcactaaaacataaagct--ccccctctctctacaattttcaacattctagaaaagaaa |
30429070 |
T |
|
| Q |
258 |
acgaagaactcagatgagtcttcatctc |
285 |
Q |
| |
|
|||||||||||||| ||||||||||||| |
|
|
| T |
30429071 |
acgaagaactcagacgagtcttcatctc |
30429098 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 69 - 285
Target Start/End: Original strand, 46024027 - 46024254
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta--------a |
157 |
Q |
| |
|
|||||||||||||||||| ||| ||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||| || | |
|
|
| T |
46024027 |
ggcaaaagttatggtgcacaagaaaatccttatgcaccgtgcataaacacttcacaaccatcagatatagtgtacacgtgtaataatcctagacttctca |
46024126 |
T |
|
| Q |
158 |
aactacaccagatcaaacttcatttgtttcaaacatttctctcactaaaacataaagctcgccctctctctctacaattttcaacattatgaaaaagaaa |
257 |
Q |
| |
|
||||||| | ||||||||||||||| |||||| ||||||||||||||||||||||| || |||||| |||||||||||||||||||| || |||||||| |
|
|
| T |
46024127 |
aactacattaaatcaaacttcatttgcttcaaatatttctctcactaaaacataaagttctccctctatctctacaattttcaacattttggaaaagaaa |
46024226 |
T |
|
| Q |
258 |
acgaagaactcagatgagtcttcatctc |
285 |
Q |
| |
|
||||||||||||||| |||||||||||| |
|
|
| T |
46024227 |
acgaagaactcagattagtcttcatctc |
46024254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 69 - 234
Target Start/End: Complemental strand, 15975001 - 15974825
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta--------a |
157 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||| ||||||||| ||||||||| ||| | |
|
|
| T |
15975001 |
ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcatatttagtgtacacatgtaataatcttaggcttatca |
15974902 |
T |
|
| Q |
158 |
aactacaccagatcaaacttcatttgtttcaaacatttctctcactaaaacataaagctcgccctctctctctacaa |
234 |
Q |
| |
|
|| ||||||| |||||||||||| || ||||||||||||||||||||||||||||||||| | | |||||| ||||| |
|
|
| T |
15974901 |
aagtacaccaaatcaaacttcatctgcttcaaacatttctctcactaaaacataaagctctctccctctctgtacaa |
15974825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 98 - 236
Target Start/End: Complemental strand, 46573533 - 46573387
Alignment:
| Q |
98 |
tgcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta--------aaactacaccagatcaaacttcatttgtttcaa |
189 |
Q |
| |
|
|||||||| ||||||||||||||| |||||||| ||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||| |
|
|
| T |
46573533 |
tgcaccgtatataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaatcaaacttcatttgcttcaa |
46573434 |
T |
|
| Q |
190 |
acatttctctcactaaaacataaagctcgccctctctctctacaatt |
236 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||| ||||||||| |
|
|
| T |
46573433 |
acatttctctcactaaaacataaagctctccctctctatctacaatt |
46573387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 48690895 - 48690981
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataat |
152 |
Q |
| |
|
||||||||||||||||||||| |||||||| |||||||||||||||| ||||||| ||||| || ||||||||||||||||||| |
|
|
| T |
48690895 |
ggcaaaagttatggtgcataaagaaatccttatgcaccgtgcataaacagttcacaaccatcaaatctagtgtacacgtgtaataat |
48690981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 152
Target Start/End: Original strand, 28396721 - 28396808
Alignment:
| Q |
68 |
aggcaaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataat |
152 |
Q |
| |
|
|||||||||||| | |||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||| | |||||||| |
|
|
| T |
28396721 |
aggcaaaagttacgatgcataaggaaatccttatgcaccgtgcataaacatttcacaatcatcagatctagtgtacaagagtaataat |
28396808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 152
Target Start/End: Original strand, 5757419 - 5757473
Alignment:
| Q |
98 |
tgcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataat |
152 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
5757419 |
tgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataat |
5757473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 48305356 - 48305406
Alignment:
| Q |
186 |
tcaaacatttctctcactaaaacataaagctcgccctctctctctacaatt |
236 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| |||||||||||||||||| |
|
|
| T |
48305356 |
tcaaacatttctctcaataaaacataaagctctccctctctctctacaatt |
48305406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 48691112 - 48691162
Alignment:
| Q |
186 |
tcaaacatttctctcactaaaacataaagctcgccctctctctctacaatt |
236 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
48691112 |
tcaaaaatttctctcactaaaacataaagctctccctctctctctacaatt |
48691162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 12279745 - 12279828
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatc---ctgcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaat |
149 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||| ||||||||| ||| |||| |||||| ||||||||| |
|
|
| T |
12279745 |
ggcaaaagttatggtgcataaggaaatctttatgcaccgtgcataaagacttcacaaccattagatctagtgtatacgtgtaat |
12279828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 44141284 - 44141230
Alignment:
| Q |
98 |
tgcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataat |
152 |
Q |
| |
|
|||||| |||||||||||||||||| |||| |||| ||||||||||||||||||| |
|
|
| T |
44141284 |
tgcaccctgcataaacacttcacaaccatctgatttagtgtacacgtgtaataat |
44141230 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 149
Target Start/End: Original strand, 12279641 - 12279724
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaat |
149 |
Q |
| |
|
||||||||||||||| |||||||||||| | |||||||| ||||| ||||||||| ||| |||| |||||||||||||||| |
|
|
| T |
12279641 |
ggcaaaagttatggtacataaggaaatcattatgcaccgtgtataaagacttcacaaccattagatccagtgtacacgtgtaat |
12279724 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 48305237 - 48305322
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataat |
152 |
Q |
| |
|
|||||||||||||||||||||||| |||| ||||||||||||||||||| |||| |||| ||| ||||||||||| ||||||| |
|
|
| T |
48305237 |
ggcaaaagttatggtgcataaggat-tccttatgcaccgtgcataaacactttacaaacatcggatctagtgtacacgtataataat |
48305322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 101 - 197
Target Start/End: Original strand, 33797966 - 33798070
Alignment:
| Q |
101 |
accgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataa--------ttttaaaactacaccagatcaaacttcatttgtttcaaaca |
192 |
Q |
| |
|
|||||||||||||| ||||||| |||||||| ||| |||||||||||||| || | |||||||| || ||||||||||||||| |||||||| |
|
|
| T |
33797966 |
accgtgcataaacatttcacaaccatcagatctagtatacacgtgtaataatcctagacttctcaaactacatcaaatcaaacttcatttgcttcaaaca |
33798065 |
T |
|
| Q |
193 |
tttct |
197 |
Q |
| |
|
||||| |
|
|
| T |
33798066 |
tttct |
33798070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 28396842 - 28396892
Alignment:
| Q |
186 |
tcaaacatttctctcactaaaacataaagctcgccctctctctctacaatt |
236 |
Q |
| |
|
|||||||||||||||| |||||||||||| || |||||||||||| ||||| |
|
|
| T |
28396842 |
tcaaacatttctctcaataaaacataaagttctccctctctctctgcaatt |
28396892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 132
Target Start/End: Original strand, 25778837 - 25778903
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcc---tgcaccgtgcataaacacttcacaatcatcagatt |
132 |
Q |
| |
|
|||||||||||||||||||||| |||| | ||||| |||||||| |||||||||| ||||||||| |
|
|
| T |
25778837 |
ggcaaaagttatggtgcataagaaaattcttatgcactgtgcataagcacttcacaaccatcagatt |
25778903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 48691030 - 48691078
Alignment:
| Q |
104 |
gtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataat |
152 |
Q |
| |
|
||||||| ||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
48691030 |
gtgcatagacacttcacaaccatcagatctagtgtacacgtgtaataat |
48691078 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 117; Significance: 1e-59; HSPs: 10)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 69 - 285
Target Start/End: Complemental strand, 23335772 - 23335542
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcc---tgcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta--------a |
157 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||| ||||||||||||||||||| || | |
|
|
| T |
23335772 |
ggcaaaagttatggtgcataaggaaatccgtatgcaccgtgcataaacatttcacaaccatcagatctagtgtacacgtgtaataatcataggcttctca |
23335673 |
T |
|
| Q |
158 |
aactacaccagatcaaacttcatttgtttcaaacatttctctcactaaaa-cataaagctcgccctctctctct--acaattttcaacattatgaaaaag |
254 |
Q |
| |
|
|||||||||| |||||| |||||||| |||||||||||||||||||||| |||||||||| |||||||||||| |||||||||||||||||| ||||| |
|
|
| T |
23335672 |
aactacaccaaatcaaagttcatttgcatcaaacatttctctcactaaaaacataaagctctccctctctctctctacaattttcaacattatggaaaag |
23335573 |
T |
|
| Q |
255 |
aaaacgaagaactcagatgagtcttcatctc |
285 |
Q |
| |
|
||||| ||||||||||||||||||||||||| |
|
|
| T |
23335572 |
aaaacaaagaactcagatgagtcttcatctc |
23335542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 71 - 285
Target Start/End: Complemental strand, 25017280 - 25017072
Alignment:
| Q |
71 |
caaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataattttaaaactacacca |
167 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||| | |
|
|
| T |
25017280 |
caaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataattttaggtttc----- |
25017186 |
T |
|
| Q |
168 |
gatcaaacttcatttgtttcaaacatttctctcactaaaacataaagctcgccctctctctctacaattttcaacattatgaaaaagaaaacgaagaact |
267 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| || |||||||||||||| ||| |
|
|
| T |
25017185 |
--tcaaacttcatttgcttcaaacatttctctcactaaaacataaagctctccctctctct--acaattttcaacattctggaaaagaaaacgaagtact |
25017090 |
T |
|
| Q |
268 |
cagatgagtcttcatctc |
285 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
25017089 |
cagatgagtcttcatctc |
25017072 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 71 - 279
Target Start/End: Original strand, 13362772 - 13362999
Alignment:
| Q |
71 |
caaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataa--------ttttaaaa |
159 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||| ||||||||||| || | ||| |
|
|
| T |
13362772 |
caaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtatacgtgtaataatcataggcttctcaaa |
13362871 |
T |
|
| Q |
160 |
ctacaccagatcaaacttcatttgtttcaaacatttctctcactaaaacataaagctcgcc--------ctctctctctacaattttcaacattatgaaa |
251 |
Q |
| |
|
|||||||| |||||| |||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||| || || |
|
|
| T |
13362872 |
ctacaccaaatcaaaattcatttgcttcaaacatttctctcactaaaacataaagctttccctctgtctctctctctctacaattttcaacattctggaa |
13362971 |
T |
|
| Q |
252 |
aagaaaacgaagaactcagatgagtctt |
279 |
Q |
| |
|
|||||||||||||||||| ||||||||| |
|
|
| T |
13362972 |
aagaaaacgaagaactcaaatgagtctt |
13362999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 157 - 275
Target Start/End: Original strand, 42512273 - 42512391
Alignment:
| Q |
157 |
aaactacaccagatcaaacttcatttgtttcaaacatttctctcactaaaacataaagctcgccctctctctctacaattttcaacattatgaaaaagaa |
256 |
Q |
| |
|
||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| || ||||||| |
|
|
| T |
42512273 |
aaactacaccaaatcaaacttcatttacttcaaacatttctctcactaaaacctaaagctctccctctctctctacaattttcaacattctggaaaagaa |
42512372 |
T |
|
| Q |
257 |
aacgaagaactcagatgag |
275 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
42512373 |
aacgaagaactcagatgag |
42512391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 66 - 217
Target Start/End: Complemental strand, 28070221 - 28070059
Alignment:
| Q |
66 |
agaggcaaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataa--------ttt |
154 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||| || |
|
|
| T |
28070221 |
agaggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaactatcagatctagtgtacacgtgtaataatcctagacttc |
28070122 |
T |
|
| Q |
155 |
taaaactacaccagatcaaacttcatttgtttcaaacatttctctcactaaaacataaagctc |
217 |
Q |
| |
|
| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
28070121 |
tcaaactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagctc |
28070059 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 100 - 228
Target Start/End: Complemental strand, 2827098 - 2826962
Alignment:
| Q |
100 |
caccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta--------aaactacaccagatcaaacttcatttgtttcaaac |
191 |
Q |
| |
|
|||||||||||||||||| |||| |||||||| |||||||||||||||| || ||| ||||||||||| |||||| |||||||| ||||||| |
|
|
| T |
2827098 |
caccgtgcataaacactttacaaccatcagatctagtgtacacgtgtaattatcttaggcttctcaaactacaccaaatcaaatttcatttgcttcaaac |
2826999 |
T |
|
| Q |
192 |
atttctctcactaaaacataaagctcgccctctctct |
228 |
Q |
| |
|
|||| ||||||||||||||||||||| |||||||||| |
|
|
| T |
2826998 |
atttatctcactaaaacataaagctctccctctctct |
2826962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 67 - 152
Target Start/End: Original strand, 34329125 - 34329213
Alignment:
| Q |
67 |
gaggcaaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataat |
152 |
Q |
| |
|
|||||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||||||| |||||||||| ||||||| |
|
|
| T |
34329125 |
gaggcaaaagttatggtgcataaggaaatctttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgaataataat |
34329213 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 152
Target Start/End: Complemental strand, 16668827 - 16668773
Alignment:
| Q |
98 |
tgcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataat |
152 |
Q |
| |
|
|||||| |||||||||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
16668827 |
tgcaccctgcataaacacttcacaaccatcagatctagtgtacacgtgtaataat |
16668773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 152
Target Start/End: Complemental strand, 18465582 - 18465535
Alignment:
| Q |
105 |
tgcataaacacttcacaatcatcagattaagtgtacacgtgtaataat |
152 |
Q |
| |
|
|||||||||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
18465582 |
tgcataaacacttcacaaccatcagatctagtgtacacgtgtaataat |
18465535 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 186 - 236
Target Start/End: Original strand, 34329247 - 34329293
Alignment:
| Q |
186 |
tcaaacatttctctcactaaaacataaagctcgccctctctctctacaatt |
236 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
34329247 |
tcaaacatttctctcactaaaacataaagct----ctctctctctacaatt |
34329293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0097 (Bit Score: 114; Significance: 7e-58; HSPs: 1)
Name: scaffold0097
Description:
Target: scaffold0097; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 69 - 285
Target Start/End: Original strand, 13613 - 13838
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcctg---caccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta--------a |
157 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||| ||||||||| || | |
|
|
| T |
13613 |
ggcaaaagttatggtgcataaggaaatccttatccaccgtgcataaacacttcacaaccatcagatctagtgtacacatgtaataatcctacgcttctca |
13712 |
T |
|
| Q |
158 |
aactacaccagatcaaacttcatttgtttcaaacatttctctcactaaaacataaagctcgccctctctctctacaattttcaacattatgaaaaagaaa |
257 |
Q |
| |
|
|||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| || || |||||||||||||||||||| | || |||||||| |
|
|
| T |
13713 |
aactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagttctcc--ctctctctacaattttcaactctctggaaaagaaa |
13810 |
T |
|
| Q |
258 |
acgaagaactcagatgagtcttcatctc |
285 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
13811 |
acgaagaactcagatgagtcttcatctc |
13838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 114; Significance: 7e-58; HSPs: 10)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 69 - 285
Target Start/End: Original strand, 20709774 - 20709999
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcctg---caccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta--------a |
157 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||| ||||||||| || | |
|
|
| T |
20709774 |
ggcaaaagttatggtgcataaggaaatccttatccaccgtgcataaacacttcacaaccatcagatctagtgtacacatgtaataatcctacgcttctca |
20709873 |
T |
|
| Q |
158 |
aactacaccagatcaaacttcatttgtttcaaacatttctctcactaaaacataaagctcgccctctctctctacaattttcaacattatgaaaaagaaa |
257 |
Q |
| |
|
|||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| || || |||||||||||||||||||| | || |||||||| |
|
|
| T |
20709874 |
aactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagttctcc--ctctctctacaattttcaactctctggaaaagaaa |
20709971 |
T |
|
| Q |
258 |
acgaagaactcagatgagtcttcatctc |
285 |
Q |
| |
|
|||||||||||||||||||||||||||| |
|
|
| T |
20709972 |
acgaagaactcagatgagtcttcatctc |
20709999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 69 - 236
Target Start/End: Original strand, 25192892 - 25193070
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta--------a |
157 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||| |||| |||||||||||||||||||| || | |
|
|
| T |
25192892 |
ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccattagatctagtgtacacgtgtaataattctaggcttctca |
25192991 |
T |
|
| Q |
158 |
aactacaccagatcaaacttcatttgtttcaaacatttctctcactaaaacataaagctcgccctctctctctacaatt |
236 |
Q |
| |
|
|| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
25192992 |
aattacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaagctctccctctctctctacaatt |
25193070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 69 - 237
Target Start/End: Complemental strand, 18298176 - 18297997
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataa--------ttttaa |
157 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||| || | | |
|
|
| T |
18298176 |
ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctca |
18298077 |
T |
|
| Q |
158 |
aactacaccagatcaaacttcatttgtttcaaacatttctctcactaaaacataaagctcgccctctctctctacaattt |
237 |
Q |
| |
|
|||||||||| ||||||||||||||| ||||| | ||||||||||||||||||||| ||| ||||||||||||||||||| |
|
|
| T |
18298076 |
aactacaccaaatcaaacttcatttgcttcaagcgtttctctcactaaaacataaatctctccctctctctctacaattt |
18297997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 186 - 236
Target Start/End: Complemental strand, 4579763 - 4579713
Alignment:
| Q |
186 |
tcaaacatttctctcactaaaacataaagctcgccctctctctctacaatt |
236 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
4579763 |
tcaaacatttctctcactaaaacataaagctctccctctctctctacaatt |
4579713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 152
Target Start/End: Complemental strand, 14551382 - 14551298
Alignment:
| Q |
70 |
gcaaaagttatggtgcataaggaaatcc---tgcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataat |
152 |
Q |
| |
|
|||||||||||||||||||||||||| | |||| |||||||||||||||||||| |||||||| |||||||| |||||||||| |
|
|
| T |
14551382 |
gcaaaagttatggtgcataaggaaattcttatgca-cgtgcataaacacttcacaaccatcagatctagtgtacatgtgtaataat |
14551298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 152
Target Start/End: Original strand, 25995326 - 25995373
Alignment:
| Q |
105 |
tgcataaacacttcacaatcatcagattaagtgtacacgtgtaataat |
152 |
Q |
| |
|
|||||||| ||||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
25995326 |
tgcataaatacttcacaaccatcagatttagtgtacacgtgtaataat |
25995373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 156
Target Start/End: Complemental strand, 4579851 - 4579793
Alignment:
| Q |
98 |
tgcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta |
156 |
Q |
| |
|
|||||| ||||||||||||| |||| |||||||| ||||||||||||||||||| ||| |
|
|
| T |
4579851 |
tgcaccatgcataaacactttacaaccatcagatctagtgtacacgtgtaataatctta |
4579793 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 98 - 152
Target Start/End: Original strand, 5098749 - 5098803
Alignment:
| Q |
98 |
tgcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataat |
152 |
Q |
| |
|
|||||| |||||||||||||||||| ||||| ||| | ||||||||||||||||| |
|
|
| T |
5098749 |
tgcaccctgcataaacacttcacaaccatcaaatttattgtacacgtgtaataat |
5098803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 152
Target Start/End: Complemental strand, 4281811 - 4281767
Alignment:
| Q |
108 |
ataaacacttcacaatcatcagattaagtgtacacgtgtaataat |
152 |
Q |
| |
|
||||||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
4281811 |
ataaacacttcacaaccatcagatctagtgtacacgtgtaataat |
4281767 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 98 - 132
Target Start/End: Original strand, 9143618 - 9143652
Alignment:
| Q |
98 |
tgcaccgtgcataaacacttcacaatcatcagatt |
132 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| |
|
|
| T |
9143618 |
tgcaccgtgcataaacacatcacaatcatcagatt |
9143652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 104; Significance: 7e-52; HSPs: 15)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 69 - 285
Target Start/End: Original strand, 8718101 - 8718336
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta--------a |
157 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||| |||||| ||||||||| |||||||| |||||||| |||||||||| || | |
|
|
| T |
8718101 |
ggcaaaagttatggtgcataaggaaatccttatgcaccgtacataaatacttcacaaccatcagatctagtgtacatgtgtaataatcctaggcttctta |
8718200 |
T |
|
| Q |
158 |
aactacaccagatcaaacttcatttgtttcaaacatttctctcactaaaacataaag--------ctcgccctctctctctacaattttcaacattatga |
249 |
Q |
| |
|
|||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||| || |
|
|
| T |
8718201 |
aactacaccaaatcaaacttcatttgtttaaaacatttctctcactaaaacataaagctttccctctctctctctctctctacaattttcaacattctgg |
8718300 |
T |
|
| Q |
250 |
aaaagaaaacgaagaactcagatgagtcttcatctc |
285 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| |
|
|
| T |
8718301 |
aaaagaaaacgaagaaatcagatgagtcttcatctc |
8718336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 69 - 285
Target Start/End: Original strand, 9069988 - 9070223
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta--------a |
157 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||| |||||| ||||||||| |||||||| |||||||| |||||||||| || | |
|
|
| T |
9069988 |
ggcaaaagttatggtgcataaggaaatccttatgcaccgtacataaatacttcacaaccatcagatctagtgtacatgtgtaataatcctaggcttctta |
9070087 |
T |
|
| Q |
158 |
aactacaccagatcaaacttcatttgtttcaaacatttctctcactaaaacataaag--------ctcgccctctctctctacaattttcaacattatga |
249 |
Q |
| |
|
|||||||||| |||||||||||||||||| ||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||| || |
|
|
| T |
9070088 |
aactacaccaaatcaaacttcatttgtttaaaacatttctctcactaaaacataaagctttccctctctctctctctctctacaattttcaacattctgg |
9070187 |
T |
|
| Q |
250 |
aaaagaaaacgaagaactcagatgagtcttcatctc |
285 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||| |
|
|
| T |
9070188 |
aaaagaaaacgaagaaatcagatgagtcttcatctc |
9070223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 69 - 236
Target Start/End: Complemental strand, 51362503 - 51362326
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataa--------ttttaa |
157 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||| || | | |
|
|
| T |
51362503 |
ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatttagtgtacacgtgtaataatcctaggcttctca |
51362404 |
T |
|
| Q |
158 |
aactacaccagatcaaacttcatttgtttcaaacatttctctcactaaaacataaagctcgccctctctctctacaatt |
236 |
Q |
| |
|
|||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||| |
|
|
| T |
51362403 |
aactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaacataaa-ctttccctctctctctacaatt |
51362326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 68 - 226
Target Start/End: Complemental strand, 19385381 - 19385212
Alignment:
| Q |
68 |
aggcaaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta-------- |
156 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||| || |
|
|
| T |
19385381 |
aggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatttagtgtacacgtgtaataattctaggcttctc |
19385282 |
T |
|
| Q |
157 |
aaactacaccagatcaaacttcatttgtttcaaacatttctctcactaaaacataaagctcgccctctct |
226 |
Q |
| |
|
|||||||| || ||||||||||||||| ||||| |||||| |||||||||||||||| ||| |||||||| |
|
|
| T |
19385281 |
aaactacatcaaatcaaacttcatttgcttcaatcatttccctcactaaaacataaaactctccctctct |
19385212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 82 - 236
Target Start/End: Complemental strand, 52987702 - 52987537
Alignment:
| Q |
82 |
gtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta--------aaactacaccagat |
170 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||| || ||||||||||| || |
|
|
| T |
52987702 |
gtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacaccaaat |
52987603 |
T |
|
| Q |
171 |
caaacttcatttgtttcaaacatttctctcactaaaacataaagctcgccctctctctctacaatt |
236 |
Q |
| |
|
||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
52987602 |
caaacttcatttgcttcaaatatttctctcactaaaacataaagctctccctctctctctacaatt |
52987537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 71 - 228
Target Start/End: Original strand, 50754008 - 50754176
Alignment:
| Q |
71 |
caaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta--------aaa |
159 |
Q |
| |
|
||||||||||||| |||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||||||||||| || ||| |
|
|
| T |
50754008 |
caaaagttatggtacataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaa |
50754107 |
T |
|
| Q |
160 |
ctacaccagatcaaacttcatttgtttcaaacatttctctcactaaaacataaagctcgccctctctct |
228 |
Q |
| |
|
|||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||| |
|
|
| T |
50754108 |
ctacaccaaatcaaacttcatttgattcaaacacttctctcactaaaacataaagctctccctctctct |
50754176 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 69 - 236
Target Start/End: Complemental strand, 7045365 - 7045188
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta--------a |
157 |
Q |
| |
|
||||||||||||||||||||||||||| || |||||||| ||||||||||||||| |||||||| ||||||||||||||||||| || | |
|
|
| T |
7045365 |
ggcaaaagttatggtgcataaggaaattcttatgcaccgtgtataaacacttcacaaccatcagatctagtgtacacgtgtaataatcgtaggcttctca |
7045266 |
T |
|
| Q |
158 |
aactacaccagatcaaacttcatttgtttcaaacatttctctcactaaaacataaagctcgccctctctctctacaatt |
236 |
Q |
| |
|
|||||| || ||||||||| ||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
7045265 |
gactacatcaaatcaaactt-atttgcttcaaacatttctctcactaaaacataaagctctccctctctctctacaatt |
7045188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 98 - 274
Target Start/End: Original strand, 39099229 - 39099415
Alignment:
| Q |
98 |
tgcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta--------aaactacaccagatcaaacttcatttgtttcaa |
189 |
Q |
| |
|
||||||||||||||| | ||||||| |||||||| ||||||||||||||||||| || ||||||||| | |||||||||||||||||| || |
|
|
| T |
39099229 |
tgcaccgtgcataaatatttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttctcaaactacactaaatcaaacttcatttgtttaaa |
39099328 |
T |
|
| Q |
190 |
acatttctctcactaaaacataaagctcgccctctc--tctctacaattttcaacattatgaaaaagaaaacgaagaactcagatga |
274 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| | || | |||| ||||||||||||||| |
|
|
| T |
39099329 |
acatttctctcactaaaacataaagctctccctctctttctctacaattttcaacattctcgaagaaaaaatgaagaactcagatga |
39099415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 73 - 195
Target Start/End: Complemental strand, 16277475 - 16277342
Alignment:
| Q |
73 |
aaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataa--------ttttaaaact |
161 |
Q |
| |
|
|||||||||||||||||||||||| | |||||||||||||||||||||||| ||||| || |||||||||||||||||| || | ||||| |
|
|
| T |
16277475 |
aaagttatggtgcataaggaaatctttatgcaccgtgcataaacacttcacaaccatcatatctagtgtacacgtgtaataatcctacgcttctcaaact |
16277376 |
T |
|
| Q |
162 |
acaccagatcaaacttcatttgtttcaaacattt |
195 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |
|
|
| T |
16277375 |
acaccaaatcaaacttcatttgtttcaaacattt |
16277342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 104 - 153
Target Start/End: Complemental strand, 17627258 - 17627209
Alignment:
| Q |
104 |
gtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatt |
153 |
Q |
| |
|
||||||||||||||||||| |||||||| |||||||||||||||||||| |
|
|
| T |
17627258 |
gtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatt |
17627209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 194 - 233
Target Start/End: Original strand, 31852242 - 31852281
Alignment:
| Q |
194 |
ttctctcactaaaacataaagctcgccctctctctctaca |
233 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
31852242 |
ttctctcactaaaacataaagttctccctctctctctaca |
31852281 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 64 - 92
Target Start/End: Complemental strand, 1377847 - 1377819
Alignment:
| Q |
64 |
tgagaggcaaaagttatggtgcataagga |
92 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
1377847 |
tgagaggcaaaagttatggtgcataagga |
1377819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 23699362 - 23699414
Alignment:
| Q |
100 |
caccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataat |
152 |
Q |
| |
|
|||| |||||||||||||||||| ||||| || | ||||||||||||||||| |
|
|
| T |
23699362 |
caccctgcataaacacttcacaaccatcatatctaatgtacacgtgtaataat |
23699414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 23717817 - 23717869
Alignment:
| Q |
100 |
caccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataat |
152 |
Q |
| |
|
|||| |||||||||||||||||| ||||| || | ||||||||||||||||| |
|
|
| T |
23717817 |
caccctgcataaacacttcacaaccatcatatctaatgtacacgtgtaataat |
23717869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 23736273 - 23736325
Alignment:
| Q |
100 |
caccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataat |
152 |
Q |
| |
|
|||| |||||||||||||||||| ||||| || | ||||||||||||||||| |
|
|
| T |
23736273 |
caccctgcataaacacttcacaaccatcatatctaatgtacacgtgtaataat |
23736325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 88; Significance: 2e-42; HSPs: 11)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 69 - 236
Target Start/End: Complemental strand, 33346436 - 33346258
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta--------a |
157 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| || |||||||||||||||||||| || | |
|
|
| T |
33346436 |
ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcaaatctagtgtacacgtgtaataattataggcttctca |
33346337 |
T |
|
| Q |
158 |
aactacaccagatcaaacttcatttgtttcaaacatttctctcactaaaacataaagctcgccctctctctctacaatt |
236 |
Q |
| |
|
|||||| || |||||||||| |||| |||||||||||||||||||||||||||||| || |||||||||||||||||| |
|
|
| T |
33346336 |
aactacgtcaaatcaaacttcgtttgcttcaaacatttctctcactaaaacataaagttctccctctctctctacaatt |
33346258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 98 - 228
Target Start/End: Complemental strand, 24737724 - 24737586
Alignment:
| Q |
98 |
tgcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta--------aaactacaccagatcaaacttcatttgtttcaa |
189 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| ||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||| |
|
|
| T |
24737724 |
tgcaccgtgcataaacacttcacaaccatcagatctagtgtacacgtgtaataatcctaggcttcttaaactacaccaaatcaaacttcatttgcttcaa |
24737625 |
T |
|
| Q |
190 |
acatttctctcactaaaacataaagctcgccctctctct |
228 |
Q |
| |
|
|||||||||||||||||||||||| ||| |||||||||| |
|
|
| T |
24737624 |
acatttctctcactaaaacataaaactctccctctctct |
24737586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 104 - 228
Target Start/End: Original strand, 877246 - 877378
Alignment:
| Q |
104 |
gtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataattttaa--------aactacaccagatcaaacttcatttgtttcaaacattt |
195 |
Q |
| |
|
||||||||||||||||||| ||| |||| | |||||||||| ||||||| ||| |||||||||| ||||||||||||||| ||||||||||| |
|
|
| T |
877246 |
gtgcataaacacttcacaaccattagatcaggtgtacacgtataataatcataagcttctcaaactacaccaaatcaaacttcatttgcttcaaacattt |
877345 |
T |
|
| Q |
196 |
ctctcactaaaacataaagctcgccctctctct |
228 |
Q |
| |
|
|||||||||||||| ||||||| |||||||||| |
|
|
| T |
877346 |
ctctcactaaaacaaaaagctctccctctctct |
877378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 34399641 - 34399727
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataat |
152 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
34399641 |
ggcaaaagttatggtgcataaggaaatccttatgcaccgtatataaacacttcacaatcatcagatctagtgtacacgtgtaataat |
34399727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 68 - 152
Target Start/End: Complemental strand, 15035041 - 15034954
Alignment:
| Q |
68 |
aggcaaaagttatggtgcataaggaaatcc---tgcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataat |
152 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||| |||||||| |||||||||| |
|
|
| T |
15035041 |
aggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaatcattcacaaccatcagatctagtgtacatgtgtaataat |
15034954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 29157226 - 29157312
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataat |
152 |
Q |
| |
|
|||||||||||| |||| ||||||||||| ||||||||||||||||||| |||| |||||||| ||||||||||||||||||| |
|
|
| T |
29157226 |
ggcaaaagttatcatgcacaaggaaatccttatgcaccgtgcataaacactttacaaccatcagatctagtgtacacgtgtaataat |
29157312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 72 - 122
Target Start/End: Complemental strand, 12394442 - 12394389
Alignment:
| Q |
72 |
aaaagttatggtgcataaggaaatcc---tgcaccgtgcataaacacttcacaa |
122 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
12394442 |
aaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaa |
12394389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 152
Target Start/End: Original strand, 18611228 - 18611275
Alignment:
| Q |
105 |
tgcataaacacttcacaatcatcagattaagtgtacacgtgtaataat |
152 |
Q |
| |
|
|||||||||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
18611228 |
tgcataaacacttcacaaccatcagatctagtgtacacgtgtaataat |
18611275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 66 - 132
Target Start/End: Original strand, 7089079 - 7089149
Alignment:
| Q |
66 |
agaggcaaaagttatggtgcataaggaaatcc----tgcaccgtgcataaacacttcacaatcatcagatt |
132 |
Q |
| |
|
||||||||||||||||||||||||| | | | |||||||||||||||||| |||||||||||||||| |
|
|
| T |
7089079 |
agaggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaatcatcagatt |
7089149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 141
Target Start/End: Original strand, 35119239 - 35119310
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcctgcaccgtgcataaacacttcacaatcatcagattaagtgtaca |
141 |
Q |
| |
|
|||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||| |||||||| |
|
|
| T |
35119239 |
ggcaaaagttatggtgcataagtcctta-tgcaccgtgcataaacacttcacaaccatcagatctagtgtaca |
35119310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 69 - 98
Target Start/End: Original strand, 2759826 - 2759855
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcct |
98 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
2759826 |
ggcaaaagttatggtgcataaggaaatcct |
2759855 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0238 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0238
Description:
Target: scaffold0238; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 69 - 207
Target Start/End: Complemental strand, 25297 - 25148
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcct---gcaccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataatttta--------a |
157 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||| ||||| ||| | |
|
|
| T |
25297 |
ggcaaaagttatggtgcataaggaaatccttatgcaccgtgcataaacacttcacaaccatcagatttagtgtacacgtgtcataatcttaggtttctca |
25198 |
T |
|
| Q |
158 |
aactacaccagatcaaacttcatttgtttcaaacatttctctcactaaaa |
207 |
Q |
| |
|
|||||||||| ||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
25197 |
aactacaccaaatcaaacttcatttgcttcaaacatttctctcactaaaa |
25148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0544 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0544
Description:
Target: scaffold0544; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 70 - 152
Target Start/End: Complemental strand, 10739 - 10654
Alignment:
| Q |
70 |
gcaaaagttatggtgcataaggaaatcctg---caccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataat |
152 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||| || ||||||||| |
|
|
| T |
10739 |
gcaaaagttatggtgcataaggaaatccttatacaccgtgcataaacacttcacaaccatcagatctagtgtgcatatgtaataat |
10654 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0337 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0337
Description:
Target: scaffold0337; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 72 - 152
Target Start/End: Original strand, 7020 - 7103
Alignment:
| Q |
72 |
aaaagttatggtgcataaggaaatcctg---caccgtgcataaacacttcacaatcatcagattaagtgtacacgtgtaataat |
152 |
Q |
| |
|
|||||||||||||||||| |||||| | ||||||||||||||||||||||| |||||||| ||||||||| ||||||||| |
|
|
| T |
7020 |
aaaagttatggtgcataacgaaatctttatacaccgtgcataaacacttcacaaccatcagatctagtgtacacatgtaataat |
7103 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0189 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0189
Description:
Target: scaffold0189; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 69 - 128
Target Start/End: Complemental strand, 11255 - 11193
Alignment:
| Q |
69 |
ggcaaaagttatggtgcataaggaaatcc---tgcaccgtgcataaacacttcacaatcatca |
128 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| |||||||| |||||||||| ||||| |
|
|
| T |
11255 |
ggcaaaagttatggtgcataaggaaatccttatgcactgtgcataagcacttcacaaccatca |
11193 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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