View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2693_low_3 (Length: 217)
Name: NF2693_low_3
Description: NF2693
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2693_low_3 |
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Alignment Details
Target: chr7 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 12 - 213
Target Start/End: Original strand, 44671097 - 44671310
Alignment:
| Q |
12 |
caacctaaaagggattgattaatacaatttaatttaatcctcctccctaatatg------------gatattacttattaacatttcttcatttctctgt |
99 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |
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| T |
44671097 |
caacctaaaagggatagattaatacaatttaatttaatcctcctccctaatatgatatcgactatggttattacttattaacatttcttcatttctctgt |
44671196 |
T |
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| Q |
100 |
ttctttttgccttcaaccttccccatcaataataataatcaataaaaagaaagaaattagaaaattttgaacatatacatacgtgattagatatcggaaa |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44671197 |
ttctttttgccttcaaccttccccatcaataataataatcaataaaaagaaagaaattagaaaattttgaacatatacatacgtgattagatatcggaaa |
44671296 |
T |
|
| Q |
200 |
cattattatagtac |
213 |
Q |
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|||||||||||||| |
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| T |
44671297 |
cattattatagtac |
44671310 |
T |
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