View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2694_high_13 (Length: 255)
Name: NF2694_high_13
Description: NF2694
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2694_high_13 |
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Alignment Details
Target: chr1 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 241
Target Start/End: Original strand, 48107864 - 48108100
Alignment:
| Q |
1 |
ttaagaattaataatcatattaaaagatgtgtcaatattattacctcaatagtagcaaaataatcgtagtccaaagaatgaacgcctagccctgcatata |
100 |
Q |
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| T |
48107864 |
ttaagaattaataatcatattaaaagatgtgtca------ttacctcaatagtagcaaaataatcatagtccaaagaatgaacgcctagccctgcatata |
48107957 |
T |
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| Q |
101 |
tggtgtgaagatatatatgttagatattaaaagaattgtagcactgaattat--agagagggagagattgaaacctgagataaataaaaggaaagaggtg |
198 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48107958 |
tggtgtgaagatatatatgttagatattaaaagaatagtagcactgaattatagagagagggagagattgaaacctgagataaataaaaggaaagaggtg |
48108057 |
T |
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| Q |
199 |
gtgatgaacaacaaattgcagcattttgcagtaaccttcattt |
241 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48108058 |
gtgatgaacaacaaattgcagcattttgcagtaaccttcattt |
48108100 |
T |
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