View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2694_high_16 (Length: 238)
Name: NF2694_high_16
Description: NF2694
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2694_high_16 |
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Alignment Details
Target: chr4 (Bit Score: 184; Significance: 1e-99; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 53310283 - 53310072
Alignment:
| Q |
1 |
taatcaaccagcatttcttgctggcgttatatatattagtacaccgatcttattactgaccatctttatatagccaaattattttaatttacttcatact |
100 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53310283 |
taatcaaccagcatttcttgctggcgttatat----tagtacaccgatcttattactgaccatctttatatagccaaattattttaatttacttcatact |
53310188 |
T |
|
| Q |
101 |
tttcctgaaagtacaaattaaattaacaatcccaaaacgattaaccatctttcatgtttttgatgtgatgtggtagataagcttatgcctctcctgtact |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
53310187 |
tttcctgaaagtacaaattaaattaacaatcccaaaacgattaaccatctttcatgtttttga-----tgtggtagataagcttatgcctctcctgtact |
53310093 |
T |
|
| Q |
201 |
tcttgtacctttccttgagtt |
221 |
Q |
| |
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||||||||||||||||||||| |
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| T |
53310092 |
tcttgtacctttccttgagtt |
53310072 |
T |
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