View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2694_low_3 (Length: 482)
Name: NF2694_low_3
Description: NF2694
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2694_low_3 |
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Alignment Details
Target: chr6 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 1 - 469
Target Start/End: Original strand, 33079022 - 33079474
Alignment:
| Q |
1 |
aaatatccctctattgatgaaagt-gttactagtagtgaaaa---aacaagatttaaatcaagattccatcgacatccgagaccattggtctctgtgtgg |
96 |
Q |
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| T |
33079022 |
aaatatccctgtgttcatgaaagttgttactagtaatgaaaatgaaacaagatttaaatcaagattccatcgacatc-gagaccattggtctctatgtgg |
33079120 |
T |
|
| Q |
97 |
ccccatattgaccaataggaaactaacaccttttaagactcactttcaccctcacaacatacgacaaaaaagagacacatgtcctcgtcttagtacagaa |
196 |
Q |
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| T |
33079121 |
ccccatattgaccaataggaaactaacaccttttaagac-----------ctcacaacatacgacaaaaaagagacacatgtcctcgtcttagtacagaa |
33079209 |
T |
|
| Q |
197 |
ccgtgtcccaccattcactaaattataatcacctttgtccaaaaaaattcacattattaatttatcaaatg-nnnnnnnnnncgtaacgaatactgttac |
295 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
33079210 |
ccgtgtcccaccattcactaaattataatcacctttgtccaaaaaaattcacattattaatttatcaaatgaaaaaaaaaaacgtaacgaatactgttac |
33079309 |
T |
|
| Q |
296 |
ttttaatacacgagtggcattaaagctctcgttccttctttcttttaccccgcaaaccaacaaccatcatattcatcactcatcaatcg----gtaccag |
391 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
33079310 |
ttttaatacacgagtggcattaaagctctcgttccttctttcttttaccccgcaaaccaacaaccatcatattcatcactcatcaatcggtacgtaccag |
33079409 |
T |
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| Q |
392 |
attcttctcttttctcatttctcatttccttcataaaccagcaacacca-cccccttgcgcacgttagcacctccccct |
469 |
Q |
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|||| |||||||||||||||||||||||||||| || |||||| |||||||||||||||||||||| |
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| T |
33079410 |
attc--------------ttctcatttccttcataaaccagcaacaacacccccctcgcgcacgttagcacctccccct |
33079474 |
T |
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