View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2695_high_7 (Length: 392)
Name: NF2695_high_7
Description: NF2695
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2695_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 295; Significance: 1e-165; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 295; E-Value: 1e-165
Query Start/End: Original strand, 14 - 388
Target Start/End: Original strand, 5558859 - 5559236
Alignment:
| Q |
14 |
aaatgttagtacccttatgagatataatatgttgataagaggatcaatacctctttctatnnnnnnngaggatcactacctcacgattacacgcaagttg |
113 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
5558859 |
aaatgtaagtacccttatgagatataatatgttgataagaggatcaatacctctttctataaaaaaagaggatcactacctcacgattacacgcaagttg |
5558958 |
T |
|
| Q |
114 |
tttgaatctcacattgccataacatgctatggagataagtaggatcccgaagaatcccttttattgtcttgtgcagcaaacaagtatgggagtgaagctt |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5558959 |
tttgaatctcacattgccataacatgctatggagataagtaggatcccgaagaatcccttttattgtcttgtgcagcaaacaagtatgggagtgaagctt |
5559058 |
T |
|
| Q |
214 |
cctccacatttccaacttgccatgccaagtcacacttctggttactttctatcaatatcacacattataatttcaccatttgttgattnnnnnnntaata |
313 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
5559059 |
cctccacatttccaacttgccatgccaagtcacacttctggttactttctatcaatatcacacattataatttcaccatttgttgatt-aaaaaataata |
5559157 |
T |
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| Q |
314 |
aaaatccactatttgtcttgtggggggcacctcttatgacatacgatagtttttctt----cttcttctaatacactat |
388 |
Q |
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| ||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||| |
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| T |
5559158 |
ataatccactatttgtcttgtggggtacacctcttatgacatacgatagtttttttttttccttcttctaatacactat |
5559236 |
T |
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