View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2695_low_11 (Length: 344)
Name: NF2695_low_11
Description: NF2695
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2695_low_11 |
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Alignment Details
Target: chr3 (Bit Score: 307; Significance: 1e-173; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 307; E-Value: 1e-173
Query Start/End: Original strand, 1 - 330
Target Start/End: Complemental strand, 12135339 - 12135009
Alignment:
| Q |
1 |
attggccacaacaggttcatctcaatcatttgataatgcatatttatgtctagctcacaatagcaaagattgattatagtggtaattatgatattggaaa |
100 |
Q |
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| T |
12135339 |
attggccacaacaggttcatctcaatcatttgataatgcatatttatgtctagctcacaatagcaaagattgattatagtgataattatgatattggaaa |
12135240 |
T |
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| Q |
101 |
ataggacacgagataatagcattataaatcaaaaaccaaattgtgtcactccatcttcaatgtgttaggacacttttctatagtttcaatttgatgttca |
200 |
Q |
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| T |
12135239 |
ataggacacgagataatagcattataaatcaaaaaccaaattgtgtcactccatcttcaatgtgttaggacacttttctatagtttcaatttgatgttca |
12135140 |
T |
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| Q |
201 |
aaatggagttcgattgcatgattacaatgaaaaacatatttttcccagtagatgaacttggctccacatctcatggtagagtttctatttctaaatata- |
299 |
Q |
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| T |
12135139 |
aaatggagttcgattgcatgattacaatgaaaatcatatttttcccagtagatgaacttggctccacatctcatggtagagtttctttttctaaatatat |
12135040 |
T |
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| Q |
300 |
tttgtgtatatttgatgcaggaaatcacagg |
330 |
Q |
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| T |
12135039 |
tttttgtatatttgatgcaggaaatcacagg |
12135009 |
T |
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