View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2695_low_13 (Length: 325)

Name: NF2695_low_13
Description: NF2695
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2695_low_13
NF2695_low_13
[»] chr8 (1 HSPs)
chr8 (20-314)||(44299159-44299453)


Alignment Details
Target: chr8 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 20 - 314
Target Start/End: Complemental strand, 44299453 - 44299159
Alignment:
Q  20 tttagttacaatcattttgtttctattagtaacattaccatttgcctcatgtgaatcagagtgctcgtccaaatatgaaggtgtatgtcacaacaaaaat 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44299453 tttagttacaatcattttgtttctattagtaacattaccatttgcctcatgtgaatcagagtgctcgtccaaatatgaaggtgtatgtcacaacaaaaat 44299354  T
Q  120 gaagcactaaagctaaaattaattgcaatattttccatattagtgacgagcatgattggaatttgtattccaattttcacaacttcgatcccagcgttaa 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  44299353 gaagcactaaagctaaaattaattgcaatattttccatattagtgacgagcatgattggaatttgtattccaattttcacaacttcgatcccagcattaa 44299254  T
Q  220 aacccgacggagatttattcgtgatcgttaaggcttttgcctccggtgttatactcgctaccggttacatgcacgtgatgccagattcatttcag 314  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44299253 aacccgacggagatttattcgtgatcattaaggcttttgcctccggtgttatactcgctaccggttacatgcacgtgatgccagattcatttcag 44299159  T

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