View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2695_low_16 (Length: 292)
Name: NF2695_low_16
Description: NF2695
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2695_low_16 |
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Alignment Details
Target: chr6 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 31785918 - 31785639
Alignment:
| Q |
1 |
caactctagaagcaattaaaatcaaagaaaataa-ttagactatattgtacattaataatttttatttaacgaaaaatgttagtaataacatgattcatc |
99 |
Q |
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| T |
31785918 |
caactctagaagcaattaaaatcaatgaaaaaaaattagactatattgtacattaata-tttttatttaacaaaaaatgttagtaataacatgattcatc |
31785820 |
T |
|
| Q |
100 |
ttgggaataattgcacttgaatggaagacaagtgggtaatatcaattctcgtaaacataatgtccataacctagcagacaaattattgttatgcatgatc |
199 |
Q |
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||||| ||||||||||||||||||||| || | |||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |
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| T |
31785819 |
ttggggataattgcacttgaatggaagtcaggcgggtaatatcaattctcgtaaacataatatccataacctagcagataaattattgttatgcatgatc |
31785720 |
T |
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| Q |
200 |
ttttgaactatacgttagtaattagtttttaaattagtttttctcctttgtctagatttgtactctggatctccaacttctt |
281 |
Q |
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| T |
31785719 |
ttttgaactatacgcta-taattagtttttaaattagtttttctcctttgtttagattcgtactctggatctccaacttctt |
31785639 |
T |
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Target: chr5 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 252
Target Start/End: Complemental strand, 6296953 - 6296914
Alignment:
| Q |
213 |
gttagtaattagtttttaaattagtttttctcctttgtct |
252 |
Q |
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|||||||||||||| ||| ||||||||||||||||||||| |
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| T |
6296953 |
gttagtaattagttgttagattagtttttctcctttgtct |
6296914 |
T |
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