View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2695_low_6 (Length: 511)
Name: NF2695_low_6
Description: NF2695
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2695_low_6 |
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Alignment Details
Target: chr1 (Bit Score: 457; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 457; E-Value: 0
Query Start/End: Original strand, 18 - 489
Target Start/End: Original strand, 34869413 - 34869882
Alignment:
| Q |
18 |
actatgagtgcagtgtgaacactttgcattgctggtaaaagagaagatgttaaagaagagtcgttgaaagtgagaacttcatttcctacaaagatggaag |
117 |
Q |
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| T |
34869413 |
actatgagtgcagtgtgaacactttgcattgctggtaaaagagaagatgttaaagaagagtcgttgaaagtgagaacttcatttcctacaaagatggaag |
34869512 |
T |
|
| Q |
118 |
tgatttttgttgaagggaggtagggttggatatttgttttgatccatgcttgagcttgtttagggtctttcattttggagagatattcatttccaagccc |
217 |
Q |
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| T |
34869513 |
tgatttttgtggaagggaggtagggttggatatttgttttgatccatgcttgagcttgtttagggtctttcattttggagagatattcatttccaagccc |
34869612 |
T |
|
| Q |
218 |
taccatgaattctataccagtgttggcgaaagctttgagaacttttggatctgcgtcgtagagttttacttttgttgctccaatgcattttattagggtt |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34869613 |
taccatgaattctataccagtgttggcgaaagctttgagaacttttggatctgcgtcgtagagttttacttttgttgctccaatgcattttattagggtt |
34869712 |
T |
|
| Q |
318 |
actacgttttctggtgatggtaggttgtttgctatttgaccatagtttattccgattgagtctgtttttgttgttagtcctgcagaaagaggacactgtt |
417 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34869713 |
actacgttttctggtgatggtaggttgtttgctatttgaccatagtttattccgattgagtctgtttttgttgttagtcctgcagaaagaggacactgtt |
34869812 |
T |
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| Q |
418 |
ttcagtgatatcttacattttaagactatatataataagatgtagtagtacttaccggtaatgaaaatgcta |
489 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34869813 |
ttcagtgatatcttacattttaagac--tatataataagatgtagtagtacttaccggtaatgaaaatgcta |
34869882 |
T |
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