View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2696_high_44 (Length: 332)
Name: NF2696_high_44
Description: NF2696
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2696_high_44 |
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Alignment Details
Target: chr3 (Bit Score: 321; Significance: 0; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 1 - 329
Target Start/End: Original strand, 37027086 - 37027414
Alignment:
| Q |
1 |
cacaaaataattgatgaactctattttatacgtactaatagtatccaaattccaaagaaatgcaatgcaccacttaacctttatccttttagcaaattgt |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
37027086 |
cacaaaataattgatgaactctattttatacgtactaatagtatccaaattccaaagaaatgcaatgcaccacttaacctttatccttttagaaaattgt |
37027185 |
T |
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| Q |
101 |
tagcttataattaacatatcacaaagtgacagcaacaaattaaagcgacagcagaatcagctttagtttatatattcatgctttctcactttacggctac |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
37027186 |
tagcttataattaacatatcacaaagtgacagcaacaaattaaagcgacagcagaatcaactttagtttatatattcatgctttctcactttacggctac |
37027285 |
T |
|
| Q |
201 |
caactaactatttatattacagtccatttctcttactctccatcagcaaaatctgtgaggatattttcaaatttcaacctctaattttgtgcattagtgt |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37027286 |
caactaactatttatattacagtccatttctcttactctccatcagcaaaatctgtgaggatattttcaaatttcaacctctaattttgtgcattagtgt |
37027385 |
T |
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| Q |
301 |
taatccaattccaatggagtcaagagctt |
329 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
37027386 |
taatccaattccaatggagtcaagagctt |
37027414 |
T |
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