View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2696_high_52 (Length: 303)

Name: NF2696_high_52
Description: NF2696
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2696_high_52
NF2696_high_52
[»] chr4 (22 HSPs)
chr4 (160-280)||(26435800-26435920)
chr4 (160-280)||(26832731-26832851)
chr4 (160-280)||(26434020-26434140)
chr4 (17-130)||(26433877-26433990)
chr4 (17-130)||(26435657-26435770)
chr4 (17-130)||(26832588-26832701)
chr4 (162-280)||(24307221-24307339)
chr4 (160-277)||(34662206-34662323)
chr4 (165-277)||(23408705-23408817)
chr4 (21-130)||(23868589-23868698)
chr4 (162-277)||(23415874-23415989)
chr4 (162-277)||(23885825-23885940)
chr4 (162-280)||(23868730-23868848)
chr4 (17-130)||(23885680-23885793)
chr4 (165-277)||(23402075-23402187)
chr4 (165-277)||(23453537-23453649)
chr4 (20-125)||(34662358-34662463)
chr4 (21-121)||(23401931-23402031)
chr4 (21-121)||(23408861-23408961)
chr4 (17-121)||(24307076-24307180)
chr4 (21-130)||(23416018-23416127)
chr4 (21-118)||(23453696-23453793)
[»] chr1 (3 HSPs)
chr1 (160-277)||(41670396-41670513)
chr1 (160-277)||(40795765-40795882)
chr1 (160-280)||(29391462-29391582)
[»] chr7 (1 HSPs)
chr7 (160-280)||(40180432-40180552)
[»] chr2 (1 HSPs)
chr2 (21-69)||(14715372-14715420)


Alignment Details
Target: chr4 (Bit Score: 113; Significance: 3e-57; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 160 - 280
Target Start/End: Original strand, 26435800 - 26435920
Alignment:
Q  160 gcgttgaaacatacaagatctacatcttcaaggtcctgaaacaagttcacccagatattggtatctcaagcaaagccatgggtatcatgaacagtttcat 259  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  26435800 gcgttgaaacatacaagatctacatcttcaaggttctgaaacaagttcacccagacattggtatctcaagcaaagccatgggtatcatgaacagtttcat 26435899  T
Q  260 caatgatatcttcgagaaact 280  Q
    |||||||||||||||||||||    
T  26435900 caatgatatcttcgagaaact 26435920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 160 - 280
Target Start/End: Original strand, 26832731 - 26832851
Alignment:
Q  160 gcgttgaaacatacaagatctacatcttcaaggtcctgaaacaagttcacccagatattggtatctcaagcaaagccatgggtatcatgaacagtttcat 259  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  26832731 gcgttgaaacatacaagatctacatcttcaaggttctgaaacaagttcacccagacattggtatctcaagcaaagccatgggtatcatgaacagtttcat 26832830  T
Q  260 caatgatatcttcgagaaact 280  Q
    |||||||||||||||||||||    
T  26832831 caatgatatcttcgagaaact 26832851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 160 - 280
Target Start/End: Original strand, 26434020 - 26434140
Alignment:
Q  160 gcgttgaaacatacaagatctacatcttcaaggtcctgaaacaagttcacccagatattggtatctcaagcaaagccatgggtatcatgaacagtttcat 259  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  26434020 gcgttgaaacatacaagatctacatcttcaaggttctgaaacaagttcatccagacattggtatctcaagcaaagccatgggtatcatgaacagtttcat 26434119  T
Q  260 caatgatatcttcgagaaact 280  Q
    |||||||||||||||||||||    
T  26434120 caatgatatcttcgagaaact 26434140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 26433877 - 26433990
Alignment:
Q  17 agcagagaagaaacccgcagaggagaagaagtccaccgtcgccgagaaagctccggcggagaagaagccgaaggccggaaagaagcttccaaaggaaggt 116  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26433877 agcagagaagaaaccagcagaggagaagaagtccaccgtcgctgagaaagctccggcggagaagaagccgaaggccggaaagaagcttccaaaggaaggt 26433976  T
Q  117 ggttcagccgccgg 130  Q
    ||||||||||||||    
T  26433977 ggttcagccgccgg 26433990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 26435657 - 26435770
Alignment:
Q  17 agcagagaagaaacccgcagaggagaagaagtccaccgtcgccgagaaagctccggcggagaagaagccgaaggccggaaagaagcttccaaaggaaggt 116  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26435657 agcagagaagaaaccagcagaggagaagaagtccaccgtcgctgagaaagctccggcggagaagaagccgaaggccggaaagaagcttccaaaggaaggt 26435756  T
Q  117 ggttcagccgccgg 130  Q
    ||||||||||||||    
T  26435757 ggttcagccgccgg 26435770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 26832588 - 26832701
Alignment:
Q  17 agcagagaagaaacccgcagaggagaagaagtccaccgtcgccgagaaagctccggcggagaagaagccgaaggccggaaagaagcttccaaaggaaggt 116  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26832588 agcagagaagaaaccagcagaggagaagaagtccaccgtcgctgagaaagctccggcggagaagaagccaaaggccggaaagaagcttccaaaggaaggt 26832687  T
Q  117 ggttcagccgccgg 130  Q
    ||||||||||||||    
T  26832688 ggttcagccgccgg 26832701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 162 - 280
Target Start/End: Original strand, 24307221 - 24307339
Alignment:
Q  162 gttgaaacatacaagatctacatcttcaaggtcctgaaacaagttcacccagatattggtatctcaagcaaagccatgggtatcatgaacagtttcatca 261  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||    
T  24307221 gttgaaacatacaagatctatatcttcaaggttctgaaacaagttcacccagacattggtatctcaagcaaagccatgggaataatgaacagtttcatca 24307320  T
Q  262 atgatatcttcgagaaact 280  Q
    |||||||||||||||||||    
T  24307321 atgatatcttcgagaaact 24307339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 160 - 277
Target Start/End: Complemental strand, 34662323 - 34662206
Alignment:
Q  160 gcgttgaaacatacaagatctacatcttcaaggtcctgaaacaagttcacccagatattggtatctcaagcaaagccatgggtatcatgaacagtttcat 259  Q
    |||||||||| ||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||    
T  34662323 gcgttgaaacctacaagatctacatcttcaaggttctgaaacaagttcaccctgacattggtatctcaagcaaagccatgggtattatgaacagtttcat 34662224  T
Q  260 caatgatatcttcgagaa 277  Q
    ||||||||||||||||||    
T  34662223 caatgatatcttcgagaa 34662206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 165 - 277
Target Start/End: Complemental strand, 23408817 - 23408705
Alignment:
Q  165 gaaacatacaagatctacatcttcaaggtcctgaaacaagttcacccagatattggtatctcaagcaaagccatgggtatcatgaacagtttcatcaatg 264  Q
    |||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23408817 gaaacatacaagatctacatcttcaaagttctgaaacaagttcacccagacattggtatctcaagcaaagcgatgggtatcatgaacagtttcatcaatg 23408718  T
Q  265 atatcttcgagaa 277  Q
    |||||||||||||    
T  23408717 atatcttcgagaa 23408705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 21 - 130
Target Start/End: Original strand, 23868589 - 23868698
Alignment:
Q  21 gagaagaaacccgcagaggagaagaagtccaccgtcgccgagaaagctccggcggagaagaagccgaaggccggaaagaagcttccaaaggaaggtggtt 120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||||||||||||||||    
T  23868589 gagaagaaacccgcagaggagaagaagtccaccgtcgccgagaaagctcctgctgagaagaagcccaaggctggaaagaagcttccaaaggaaggtggtt 23868688  T
Q  121 cagccgccgg 130  Q
    ||||||||||    
T  23868689 cagccgccgg 23868698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 162 - 277
Target Start/End: Complemental strand, 23415989 - 23415874
Alignment:
Q  162 gttgaaacatacaagatctacatcttcaaggtcctgaaacaagttcacccagatattggtatctcaagcaaagccatgggtatcatgaacagtttcatca 261  Q
    ||||||||||||||||||||||||||||| || ||||| || ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  23415989 gttgaaacatacaagatctacatcttcaaagttctgaagcaggttcacccagacattggtatctcaagcaaggccatgggtatcatgaacagtttcatca 23415890  T
Q  262 atgatatcttcgagaa 277  Q
    ||||||||||||||||    
T  23415889 atgatatcttcgagaa 23415874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 162 - 277
Target Start/End: Original strand, 23885825 - 23885940
Alignment:
Q  162 gttgaaacatacaagatctacatcttcaaggtcctgaaacaagttcacccagatattggtatctcaagcaaagccatgggtatcatgaacagtttcatca 261  Q
    ||||||||||||||||||||||||||||| || ||||| || ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  23885825 gttgaaacatacaagatctacatcttcaaagttctgaagcaggttcacccagacattggtatctcaagcaaggccatgggtatcatgaacagtttcatca 23885924  T
Q  262 atgatatcttcgagaa 277  Q
    ||||||||||||||||    
T  23885925 atgatatcttcgagaa 23885940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 162 - 280
Target Start/End: Original strand, 23868730 - 23868848
Alignment:
Q  162 gttgaaacatacaagatctacatcttcaaggtcctgaaacaagttcacccagatattggtatctcaagcaaagccatgggtatcatgaacagtttcatca 261  Q
    ||||||||||||||||||||||||||||| || ||||| || ||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||    
T  23868730 gttgaaacatacaagatctacatcttcaaagttctgaagcaggttcacccagacattggtatctcaagcaaagccatgggaataatgaacagtttcatca 23868829  T
Q  262 atgatatcttcgagaaact 280  Q
    |||||||||||||||||||    
T  23868830 atgatatcttcgagaaact 23868848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 23885680 - 23885793
Alignment:
Q  17 agcagagaagaaacccgcagaggagaagaagtccaccgtcgccgagaaagctccggcggagaagaagccgaaggccggaaagaagcttccaaaggaaggt 116  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||||||||| || ||||||||||| ||||| ||||||||||||||||||||||||    
T  23885680 agcagagaagaaaccagctgaggagaagaagtccaccgtcgccgagaaagctcctgctgagaagaagcccaaggctggaaagaagcttccaaaggaaggt 23885779  T
Q  117 ggttcagccgccgg 130  Q
    ||||||||||||||    
T  23885780 ggttcagccgccgg 23885793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 165 - 277
Target Start/End: Original strand, 23402075 - 23402187
Alignment:
Q  165 gaaacatacaagatctacatcttcaaggtcctgaaacaagttcacccagatattggtatctcaagcaaagccatgggtatcatgaacagtttcatcaatg 264  Q
    |||||||||||||||||||||||||| || ||||| || ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23402075 gaaacatacaagatctacatcttcaaagttctgaagcaggttcacccagacattggtatctcaagcaaggccatgggtatcatgaacagtttcatcaatg 23402174  T
Q  265 atatcttcgagaa 277  Q
    |||||||||||||    
T  23402175 atatcttcgagaa 23402187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 165 - 277
Target Start/End: Complemental strand, 23453649 - 23453537
Alignment:
Q  165 gaaacatacaagatctacatcttcaaggtcctgaaacaagttcacccagatattggtatctcaagcaaagccatgggtatcatgaacagtttcatcaatg 264  Q
    |||||||||||||||||||||||||| || ||||| || ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23453649 gaaacatacaagatctacatcttcaaagttctgaatcatgttcacccagacattggtatctcaagcaaggccatgggtatcatgaacagtttcatcaatg 23453550  T
Q  265 atatcttcgagaa 277  Q
    |||||||||||||    
T  23453549 atatcttcgagaa 23453537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 34662463 - 34662358
Alignment:
Q  20 agagaagaaacccgcagaggagaagaagtccaccgtcgccgagaaagctccggcggagaagaagccgaaggccggaaagaagcttccaaaggaaggtggt 119  Q
    |||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| | |||    
T  34662463 agagaagaaacctgcagaggagaagaaatccaccgtcgccgagaaagctccggcagagaagaagccaaaggccggaaagaagcttccaaaggaaagcggt 34662364  T
Q  120 tcagcc 125  Q
    ||||||    
T  34662363 tcagcc 34662358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 21 - 121
Target Start/End: Original strand, 23401931 - 23402031
Alignment:
Q  21 gagaagaaacccgcagaggagaagaagtccaccgtcgccgagaaagctccggcggagaagaagccgaaggccggaaagaagcttccaaaggaaggtggtt 120  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||    
T  23401931 gagaagaaacccgctgaggagaagaagtccaccgtcgccgagaaggctccggcggagaagaagccaaaggcaggaaagaagctaccaaaggaaggtggtt 23402030  T
Q  121 c 121  Q
    |    
T  23402031 c 23402031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 21 - 121
Target Start/End: Complemental strand, 23408961 - 23408861
Alignment:
Q  21 gagaagaaacccgcagaggagaagaagtccaccgtcgccgagaaagctccggcggagaagaagccgaaggccggaaagaagcttccaaaggaaggtggtt 120  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||    
T  23408961 gagaagaaacccgctgaggagaagaagtccaccgtcgccgagaaggctccggcggagaagaagcccaaggcaggaaagaagctaccaaaggaaggtggtt 23408862  T
Q  121 c 121  Q
    |    
T  23408861 c 23408861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 24307076 - 24307180
Alignment:
Q  17 agcagagaagaaacccgcagaggagaagaagtccaccgtcgccgagaaagctccggcggagaagaagccgaaggccggaaagaagcttccaaaggaaggt 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||||| ||||| ||||||||||| ||||||||||||    
T  24307076 agcagagaagaaacccgcagaggagaagaagtccaccgtcgccgagaaggctcctgctgagaagaagccaaaggcaggaaagaagctaccaaaggaaggt 24307175  T
Q  117 ggttc 121  Q
    |||||    
T  24307176 ggttc 24307180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 130
Target Start/End: Complemental strand, 23416127 - 23416018
Alignment:
Q  21 gagaagaaacccgcagaggagaagaagtccaccgtcgccgagaaagctccggcggagaagaagccgaaggccggaaagaagcttccaaaggaaggtggtt 120  Q
    ||||||||||| || |||||||||||||||||||| |||||||||||||| || ||||||||||| ||||| || |||||||| ||||||||||||||||    
T  23416127 gagaagaaaccagctgaggagaagaagtccaccgttgccgagaaagctccagcagagaagaagccaaaggcagggaagaagctaccaaaggaaggtggtt 23416028  T
Q  121 cagccgccgg 130  Q
    |||| |||||    
T  23416027 cagctgccgg 23416018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 21 - 118
Target Start/End: Complemental strand, 23453793 - 23453696
Alignment:
Q  21 gagaagaaacccgcagaggagaagaagtccaccgtcgccgagaaagctccggcggagaagaagccgaaggccggaaagaagcttccaaaggaaggtgg 118  Q
    ||||||||||| || |||||||||||||||||||| |||||||||||||| || ||||||||||| ||||| |||||||||||||| |||||||||||    
T  23453793 gagaagaaacctgctgaggagaagaagtccaccgttgccgagaaagctccagcagagaagaagccaaaggctggaaagaagcttcctaaggaaggtgg 23453696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 3e-29; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 160 - 277
Target Start/End: Original strand, 41670396 - 41670513
Alignment:
Q  160 gcgttgaaacatacaagatctacatcttcaaggtcctgaaacaagttcacccagatattggtatctcaagcaaagccatgggtatcatgaacagtttcat 259  Q
    |||||||||| ||||||||||||||||||||||| || || || ||||| || || ||||||||||||||||| || ||||| ||||||||||| |||||    
T  41670396 gcgttgaaacctacaagatctacatcttcaaggttctcaagcaggttcatcctgacattggtatctcaagcaaggctatggggatcatgaacagcttcat 41670495  T
Q  260 caatgatatcttcgagaa 277  Q
    |||||||||||| |||||    
T  41670496 caatgatatctttgagaa 41670513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 160 - 277
Target Start/End: Original strand, 40795765 - 40795882
Alignment:
Q  160 gcgttgaaacatacaagatctacatcttcaaggtcctgaaacaagttcacccagatattggtatctcaagcaaagccatgggtatcatgaacagtttcat 259  Q
    |||| ||||| ||||||||||||||||||||||| || || || ||||| || || ||||| ||||| ||||| || ||||| |||||||||||||||||    
T  40795765 gcgtagaaacctacaagatctacatcttcaaggttctcaagcaggttcatcctgacattggaatctccagcaaggctatggggatcatgaacagtttcat 40795864  T
Q  260 caatgatatcttcgagaa 277  Q
    |||||| ||||| |||||    
T  40795865 caatgacatctttgagaa 40795882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 160 - 280
Target Start/End: Original strand, 29391462 - 29391582
Alignment:
Q  160 gcgttgaaacatacaagatctacatcttcaaggtcctgaaacaagttcacccagatattggtatctcaagcaaagccatgggtatcatgaacagtttcat 259  Q
    |||||||||| || ||||| |||||||||||||| || ||||| ||||| || ||||| ||||| ||   |||||| ||||| || ||||||||||||||    
T  29391462 gcgttgaaacctataagatttacatcttcaaggttctcaaacaggttcatcctgatataggtatttcttccaaagctatggggattatgaacagtttcat 29391561  T
Q  260 caatgatatcttcgagaaact 280  Q
    |||||||||||| ||||||||    
T  29391562 caatgatatctttgagaaact 29391582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 160 - 280
Target Start/End: Complemental strand, 40180552 - 40180432
Alignment:
Q  160 gcgttgaaacatacaagatctacatcttcaaggtcctgaaacaagttcacccagatattggtatctcaagcaaagccatgggtatcatgaacagtttcat 259  Q
    |||||||||| |||||||| |||||||||||||| |||||||| ||||| || ||||| ||| | |||||||| || ||||| |||||||||||||||||    
T  40180552 gcgttgaaacctacaagatatacatcttcaaggttctgaaacaggttcatcctgatatcggtgtttcaagcaaggctatgggaatcatgaacagtttcat 40180453  T
Q  260 caatgatatcttcgagaaact 280  Q
     || |||||||| ||||||||    
T  40180452 taacgatatctttgagaaact 40180432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 69
Target Start/End: Original strand, 14715372 - 14715420
Alignment:
Q  21 gagaagaaacccgcagaggagaagaagtccaccgtcgccgagaaagctc 69  Q
    |||||||||||||||||||||||||| | ||| ||||  ||||||||||    
T  14715372 gagaagaaacccgcagaggagaagaaatacactgtcgaggagaaagctc 14715420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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