View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2696_high_79 (Length: 235)

Name: NF2696_high_79
Description: NF2696
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2696_high_79
NF2696_high_79
[»] chr5 (26 HSPs)
chr5 (7-235)||(2838545-2838772)
chr5 (80-174)||(21334323-21334416)
chr5 (110-174)||(22939061-22939126)
chr5 (110-174)||(34134876-34134940)
chr5 (80-170)||(26549774-26549863)
chr5 (80-170)||(28564269-28564358)
chr5 (14-63)||(22938970-22939019)
chr5 (195-235)||(1565385-1565425)
chr5 (195-235)||(24448844-24448884)
chr5 (195-235)||(35710267-35710307)
chr5 (195-235)||(38879535-38879575)
chr5 (195-235)||(41014273-41014313)
chr5 (80-170)||(2454964-2455053)
chr5 (195-233)||(19438703-19438741)
chr5 (198-235)||(4619247-4619284)
chr5 (198-235)||(43334159-43334196)
chr5 (195-235)||(8170123-8170163)
chr5 (195-235)||(23974735-23974774)
chr5 (86-130)||(35382484-35382528)
chr5 (195-235)||(37024695-37024735)
chr5 (195-233)||(41956886-41956924)
chr5 (14-63)||(21334262-21334311)
chr5 (14-63)||(34134783-34134832)
chr5 (7-63)||(2455068-2455124)
chr5 (7-63)||(26549877-26549933)
chr5 (7-63)||(28564199-28564255)
[»] chr1 (28 HSPs)
chr1 (80-174)||(49717784-49717878)
chr1 (80-174)||(22455207-22455302)
chr1 (80-168)||(21020319-21020406)
chr1 (195-235)||(14617015-14617055)
chr1 (195-235)||(10668197-10668237)
chr1 (195-235)||(18944620-18944660)
chr1 (195-235)||(22930208-22930248)
chr1 (195-235)||(34714600-34714640)
chr1 (195-235)||(34725237-34725277)
chr1 (195-233)||(32632699-32632737)
chr1 (197-235)||(40424721-40424759)
chr1 (198-235)||(25290143-25290180)
chr1 (194-235)||(46248094-46248135)
chr1 (195-235)||(19932893-19932933)
chr1 (195-235)||(20004233-20004273)
chr1 (195-235)||(45812676-45812716)
chr1 (195-235)||(46991781-46991821)
chr1 (195-235)||(47214488-47214528)
chr1 (200-235)||(18742102-18742137)
chr1 (200-235)||(45402077-45402112)
chr1 (201-235)||(30395869-30395903)
chr1 (205-235)||(33222971-33223001)
chr1 (14-63)||(21020257-21020306)
chr1 (195-235)||(8197020-8197060)
chr1 (195-235)||(10163736-10163776)
chr1 (195-235)||(27474258-27474298)
chr1 (195-235)||(38478421-38478461)
chr1 (195-235)||(41319947-41319987)
[»] chr6 (33 HSPs)
chr6 (80-174)||(28109563-28109657)
chr6 (80-174)||(18139877-18139971)
chr6 (80-174)||(12982137-12982232)
chr6 (80-174)||(23380795-23380888)
chr6 (80-174)||(23841469-23841563)
chr6 (81-174)||(12744915-12745006)
chr6 (86-174)||(22959116-22959204)
chr6 (86-174)||(23829188-23829276)
chr6 (80-174)||(24408492-24408586)
chr6 (80-170)||(14967750-14967839)
chr6 (80-170)||(21632517-21632606)
chr6 (80-174)||(32111215-32111308)
chr6 (195-233)||(33922971-33923009)
chr6 (194-235)||(1354896-1354937)
chr6 (86-159)||(25978295-25978367)
chr6 (195-235)||(1346918-1346958)
chr6 (7-63)||(12745020-12745076)
chr6 (195-235)||(14975221-14975261)
chr6 (7-63)||(22959223-22959279)
chr6 (7-63)||(23829113-23829169)
chr6 (7-63)||(23841400-23841456)
chr6 (197-235)||(3815218-3815256)
chr6 (188-233)||(1941802-1941847)
chr6 (14-63)||(23380733-23380782)
chr6 (195-235)||(8409197-8409237)
chr6 (195-235)||(9161077-9161117)
chr6 (7-63)||(18139808-18139864)
chr6 (13-63)||(28109500-28109550)
chr6 (14-63)||(12982075-12982124)
chr6 (14-63)||(24408599-24408648)
chr6 (207-235)||(3116271-3116299)
chr6 (195-235)||(15866178-15866218)
chr6 (199-235)||(24734591-24734627)
[»] chr3 (50 HSPs)
chr3 (80-174)||(7831758-7831852)
chr3 (80-175)||(10882972-10883066)
chr3 (80-174)||(2776978-2777071)
chr3 (80-174)||(13556598-13556691)
chr3 (80-174)||(24126983-24127076)
chr3 (101-174)||(36534670-36534743)
chr3 (86-172)||(10961409-10961495)
chr3 (86-172)||(10964918-10965004)
chr3 (110-174)||(55033627-55033692)
chr3 (110-174)||(28328843-28328907)
chr3 (112-174)||(15197098-15197161)
chr3 (110-174)||(47052921-47052986)
chr3 (80-169)||(9156478-9156566)
chr3 (110-174)||(22025754-22025818)
chr3 (80-131)||(19303300-19303351)
chr3 (14-63)||(15197006-15197055)
chr3 (14-63)||(47053028-47053077)
chr3 (194-235)||(52926351-52926392)
chr3 (195-235)||(7697026-7697066)
chr3 (195-235)||(8247830-8247870)
chr3 (195-235)||(10870092-10870132)
chr3 (195-235)||(13730745-13730785)
chr3 (195-235)||(16735417-16735457)
chr3 (195-235)||(40272953-40272993)
chr3 (195-235)||(46421178-46421218)
chr3 (14-63)||(12541941-12541990)
chr3 (14-63)||(22025861-22025910)
chr3 (81-130)||(22995518-22995567)
chr3 (14-63)||(55033536-55033585)
chr3 (195-235)||(1217066-1217106)
chr3 (195-235)||(4495805-4495845)
chr3 (195-235)||(6411962-6412002)
chr3 (195-235)||(9607179-9607219)
chr3 (195-235)||(12914176-12914216)
chr3 (195-235)||(22609743-22609782)
chr3 (195-234)||(9276250-9276289)
chr3 (196-235)||(25517314-25517353)
chr3 (196-235)||(29366863-29366902)
chr3 (14-60)||(28328953-28328999)
chr3 (14-63)||(10883078-10883127)
chr3 (198-235)||(21874999-21875036)
chr3 (198-235)||(23871418-23871455)
chr3 (14-62)||(2777084-2777132)
chr3 (7-63)||(10961513-10961569)
chr3 (7-63)||(10965022-10965078)
chr3 (195-227)||(12525386-12525418)
chr3 (7-63)||(18540909-18540965)
chr3 (14-62)||(24127089-24127137)
chr3 (7-63)||(36534581-36534637)
chr3 (195-235)||(39203492-39203532)
[»] scaffold0270 (2 HSPs)
scaffold0270 (80-174)||(2022-2115)
scaffold0270 (14-63)||(1960-2009)
[»] chr2 (37 HSPs)
chr2 (80-174)||(24236486-24236579)
chr2 (80-174)||(25872157-25872250)
chr2 (101-174)||(31429409-31429482)
chr2 (80-174)||(1505273-1505367)
chr2 (80-174)||(16789378-16789471)
chr2 (80-174)||(45455254-45455348)
chr2 (112-173)||(13973804-13973865)
chr2 (80-174)||(25958337-25958430)
chr2 (192-235)||(9671131-9671174)
chr2 (127-174)||(9187332-9187379)
chr2 (14-63)||(9187245-9187294)
chr2 (195-235)||(8455457-8455497)
chr2 (195-235)||(12024059-12024099)
chr2 (195-235)||(14530272-14530312)
chr2 (195-235)||(25079859-25079899)
chr2 (195-235)||(39189562-39189602)
chr2 (197-235)||(11514392-11514430)
chr2 (13-63)||(16789316-16789366)
chr2 (14-63)||(13973712-13973761)
chr2 (194-235)||(17705448-17705489)
chr2 (14-63)||(25958276-25958325)
chr2 (14-63)||(31429328-31429377)
chr2 (14-62)||(1505212-1505260)
chr2 (195-235)||(21779400-21779440)
chr2 (195-235)||(22371011-22371051)
chr2 (195-235)||(23397720-23397760)
chr2 (196-235)||(10543653-10543692)
chr2 (196-235)||(14544018-14544057)
chr2 (197-235)||(17896215-17896253)
chr2 (201-235)||(27573581-27573615)
chr2 (14-63)||(24236591-24236640)
chr2 (198-235)||(25249878-25249915)
chr2 (14-63)||(25872262-25872311)
chr2 (14-63)||(45455360-45455409)
chr2 (195-235)||(7214488-7214528)
chr2 (195-235)||(26684763-26684803)
chr2 (195-235)||(27466271-27466311)
[»] scaffold0321 (1 HSPs)
scaffold0321 (14-174)||(4743-4900)
[»] chr4 (41 HSPs)
chr4 (80-171)||(5671974-5672064)
chr4 (80-172)||(19862132-19862225)
chr4 (80-174)||(56196939-56197033)
chr4 (80-174)||(27678928-27679021)
chr4 (80-174)||(39499841-39499934)
chr4 (110-174)||(19825729-19825794)
chr4 (110-174)||(3799793-3799857)
chr4 (110-174)||(49638467-49638531)
chr4 (198-235)||(17315439-17315476)
chr4 (190-235)||(20224933-20224978)
chr4 (195-235)||(5648213-5648253)
chr4 (195-235)||(6430766-6430806)
chr4 (195-235)||(10660358-10660398)
chr4 (195-235)||(10874503-10874543)
chr4 (195-235)||(23501747-23501787)
chr4 (195-235)||(48598964-48599004)
chr4 (190-235)||(13256538-13256583)
chr4 (198-235)||(16911519-16911556)
chr4 (198-235)||(18969698-18969735)
chr4 (14-63)||(19825836-19825885)
chr4 (14-63)||(19862070-19862119)
chr4 (14-63)||(27678867-27678916)
chr4 (14-63)||(39499946-39499995)
chr4 (7-60)||(49638368-49638421)
chr4 (195-235)||(5306804-5306844)
chr4 (14-62)||(5672077-5672125)
chr4 (195-235)||(11054287-11054327)
chr4 (199-235)||(14590795-14590831)
chr4 (195-235)||(20405047-20405087)
chr4 (195-235)||(21646918-21646958)
chr4 (195-231)||(30639334-30639370)
chr4 (195-235)||(47528669-47528709)
chr4 (195-235)||(55766607-55766647)
chr4 (195-235)||(55830862-55830902)
chr4 (14-62)||(56197047-56197095)
chr4 (14-63)||(3799702-3799751)
chr4 (198-235)||(5313135-5313172)
chr4 (14-63)||(15432906-15432955)
chr4 (202-235)||(16408744-16408777)
chr4 (198-235)||(54730206-54730243)
chr4 (200-232)||(30352735-30352767)
[»] chr7 (37 HSPs)
chr7 (80-174)||(45289103-45289196)
chr7 (14-174)||(26137652-26137807)
chr7 (80-174)||(20594838-20594931)
chr7 (110-170)||(4543886-4543946)
chr7 (104-174)||(22231273-22231343)
chr7 (104-174)||(22255396-22255466)
chr7 (86-174)||(9274974-9275063)
chr7 (195-235)||(2541161-2541201)
chr7 (195-235)||(12473258-12473298)
chr7 (195-235)||(21172148-21172188)
chr7 (195-235)||(32758215-32758255)
chr7 (195-235)||(42798623-42798663)
chr7 (195-235)||(46354148-46354188)
chr7 (195-235)||(47077994-47078034)
chr7 (195-235)||(48735262-48735302)
chr7 (196-235)||(18326989-18327028)
chr7 (189-235)||(2663072-2663118)
chr7 (14-60)||(4543992-4544038)
chr7 (14-60)||(22231187-22231233)
chr7 (14-60)||(22255506-22255552)
chr7 (201-235)||(40463837-40463871)
chr7 (195-233)||(42495978-42496016)
chr7 (14-63)||(45289041-45289090)
chr7 (199-235)||(14732963-14732999)
chr7 (195-235)||(22699111-22699151)
chr7 (195-235)||(34626348-34626388)
chr7 (195-235)||(35334955-35334995)
chr7 (195-235)||(42805478-42805518)
chr7 (195-235)||(43557426-43557466)
chr7 (196-235)||(5180298-5180337)
chr7 (16-63)||(20594944-20594991)
chr7 (7-60)||(9274898-9274951)
chr7 (198-235)||(29140501-29140538)
chr7 (198-231)||(35787383-35787416)
chr7 (195-235)||(7193039-7193079)
chr7 (195-235)||(21447544-21447584)
chr7 (195-235)||(42476827-42476867)
[»] scaffold0520 (1 HSPs)
scaffold0520 (14-174)||(10940-11096)
[»] chr8 (44 HSPs)
chr8 (80-174)||(33879214-33879307)
chr8 (80-171)||(38250308-38250398)
chr8 (110-174)||(25593547-25593612)
chr8 (111-174)||(23645236-23645300)
chr8 (114-174)||(12584416-12584476)
chr8 (80-174)||(17929226-17929321)
chr8 (190-235)||(12670389-12670434)
chr8 (14-63)||(23645343-23645392)
chr8 (195-235)||(7136670-7136710)
chr8 (195-235)||(30454236-30454276)
chr8 (195-235)||(35261633-35261673)
chr8 (110-174)||(39658679-39658742)
chr8 (14-61)||(12584524-12584571)
chr8 (195-234)||(39461138-39461177)
chr8 (80-130)||(31983119-31983169)
chr8 (190-235)||(17823525-17823570)
chr8 (89-130)||(22224265-22224306)
chr8 (89-130)||(22230607-22230648)
chr8 (14-63)||(23945727-23945776)
chr8 (14-63)||(25593457-25593506)
chr8 (14-63)||(33879153-33879202)
chr8 (195-235)||(2626473-2626513)
chr8 (195-235)||(13160656-13160696)
chr8 (195-235)||(18164900-18164940)
chr8 (195-235)||(20869637-20869677)
chr8 (195-235)||(23286434-23286474)
chr8 (195-235)||(24245405-24245445)
chr8 (195-235)||(28817767-28817807)
chr8 (195-235)||(36720750-36720790)
chr8 (7-63)||(38250239-38250295)
chr8 (195-235)||(40605046-40605086)
chr8 (195-235)||(44530103-44530143)
chr8 (7-62)||(17929335-17929390)
chr8 (86-133)||(23945794-23945840)
chr8 (197-235)||(31454144-31454182)
chr8 (190-231)||(29521830-29521871)
chr8 (195-232)||(42840863-42840900)
chr8 (199-235)||(20284214-20284250)
chr8 (199-235)||(21070843-21070879)
chr8 (7-63)||(22224188-22224244)
chr8 (7-63)||(22230530-22230586)
chr8 (199-235)||(25250480-25250516)
chr8 (7-63)||(31983184-31983240)
chr8 (195-235)||(45071219-45071259)
[»] scaffold0043 (2 HSPs)
scaffold0043 (110-174)||(12703-12768)
scaffold0043 (14-63)||(12810-12859)
[»] scaffold0005 (2 HSPs)
scaffold0005 (110-174)||(294417-294481)
scaffold0005 (199-235)||(226547-226583)
[»] scaffold0036 (2 HSPs)
scaffold0036 (110-174)||(111909-111974)
scaffold0036 (14-63)||(111818-111867)
[»] scaffold0214 (1 HSPs)
scaffold0214 (80-174)||(21453-21545)
[»] scaffold0084 (2 HSPs)
scaffold0084 (110-174)||(27433-27498)
scaffold0084 (14-60)||(27545-27591)
[»] scaffold0048 (4 HSPs)
scaffold0048 (110-174)||(13950-14015)
scaffold0048 (110-174)||(27206-27270)
scaffold0048 (14-60)||(14062-14108)
scaffold0048 (14-63)||(27314-27363)
[»] scaffold0258 (1 HSPs)
scaffold0258 (197-235)||(13164-13202)
[»] scaffold0037 (1 HSPs)
scaffold0037 (116-174)||(97165-97222)
[»] scaffold0126 (1 HSPs)
scaffold0126 (14-63)||(1488-1537)
[»] scaffold0187 (4 HSPs)
scaffold0187 (195-235)||(8899-8939)
scaffold0187 (195-235)||(19227-19267)
scaffold0187 (198-235)||(10189-10226)
scaffold0187 (198-235)||(20517-20554)
[»] scaffold0168 (1 HSPs)
scaffold0168 (195-235)||(30533-30573)
[»] scaffold0083 (1 HSPs)
scaffold0083 (7-63)||(27489-27545)
[»] scaffold0057 (1 HSPs)
scaffold0057 (195-235)||(24908-24948)
[»] scaffold0035 (1 HSPs)
scaffold0035 (110-174)||(61206-61269)
[»] scaffold0134 (1 HSPs)
scaffold0134 (80-130)||(8733-8783)
[»] scaffold0024 (1 HSPs)
scaffold0024 (195-235)||(83829-83869)
[»] scaffold0014 (2 HSPs)
scaffold0014 (80-130)||(225477-225527)
scaffold0014 (7-63)||(225542-225598)
[»] scaffold0018 (1 HSPs)
scaffold0018 (203-235)||(73002-73034)


Alignment Details
Target: chr5 (Bit Score: 160; Significance: 2e-85; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 7 - 235
Target Start/End: Original strand, 2838545 - 2838772
Alignment:
Q  7 gaaacgatgcaagttctagaaatgcacatgaatggaacactctttataagtaaattgnnnnnnnnnnnnnnnnttggcaatgaaccttatagtgttagat 106  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||                ||||| |||||||||||||||||||||    
T  2838545 gaaacgatgcaagttctagaaatgcacatgaatggaacactctttataagtaaattgaaaaaaaaataaaaa-ttggccatgaaccttatagtgttagat 2838643  T
Q  107 ttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctcaatatctttccatcattttcgaggggtaacct 206  Q
    || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  2838644 ttctgggagttgtgactacctatctttaactgtcgtacacttcgcctttaaatcacaagtcactcctcaatatctttccatcattttcaaggggtaacct 2838743  T
Q  207 tggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||||||||||||||||||    
T  2838744 tggcgcaaccggtaaagttgttgtcatgt 2838772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 21334323 - 21334416
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    ||||| |||||||||| ||| |||||||| |||||||||||||||||||||||| |||| | |||||||||| || |||||||||||||||||||    
T  21334323 ttggccatgaaccttacagt-ttagatttctgggagttgtgactacctatctttcactgccatacacttcgcattagaatcacaagtcactcctc 21334416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 22939061 - 22939126
Alignment:
Q  110 tgggagttgtgactacctatctttaactgtcgtacacttcgcctttg-aatcacaagtcactcctc 174  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  22939061 tgggagttgtgactacctatctttaactgccgtacacttcgcctttgaaatcacaagtcactcctc 22939126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 34134876 - 34134940
Alignment:
Q  110 tgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    ||||||||||||||||||||||||  ||| ||||||||| |||||  ||||||||||||||||||    
T  34134876 tgggagttgtgactacctatctttcgctgccgtacactttgccttcaaatcacaagtcactcctc 34134940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 170
Target Start/End: Complemental strand, 26549863 - 26549774
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcact 170  Q
    ||||| |||||||||| |||||||||||| ||||||||| |||||||||||   |  || |||||||||||||||||||  ||||||||||    
T  26549863 ttggctatgaaccttacagtgttagatttctgggagttgcgactacctatc-acacatgccgtacacttcgcctttgaaatacaagtcact 26549774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 170
Target Start/End: Original strand, 28564269 - 28564358
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcact 170  Q
    ||||| |||||||||| |||||||||||| ||||||||| |||||||||||   |  || |||||||||||||||||||  ||||||||||    
T  28564269 ttggctatgaaccttacagtgttagatttctgggagttgcgactacctatc-acacatgccgtacacttcgcctttgaaatacaagtcact 28564358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 22938970 - 22939019
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||||||||||||||| | ||| ||||||||||||||||||||||||||    
T  22938970 tgcaagttctagaaatgtaaatgcatggaacactctttataagtaaattg 22939019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 1565385 - 1565425
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  1565385 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 1565425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 24448844 - 24448884
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  24448844 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 24448884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 35710267 - 35710307
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  35710267 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 35710307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 38879535 - 38879575
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  38879535 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 38879575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 41014273 - 41014313
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  41014273 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 41014313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 170
Target Start/End: Complemental strand, 2455053 - 2454964
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcact 170  Q
    ||||| ||||||||||   |||||||||| |||||||||||||||||||||   |  || |||||||||||||||||||  ||||||||||    
T  2455053 ttggctatgaaccttacgctgttagatttctgggagttgtgactacctatc-acacatgccgtacacttcgcctttgaaatacaagtcact 2454964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 19438703 - 19438741
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcat 233  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  19438703 gaggggtaaccttggcgcaactggtaaagttgttgtcat 19438741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 4619284 - 4619247
Alignment:
Q  198 gggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||||||| |||||||||||||||||||    
T  4619284 gggtaaccttggcgcaactggtaaagttgttgtcatgt 4619247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 43334159 - 43334196
Alignment:
Q  198 gggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||||||| |||||||||||||||||||    
T  43334159 gggtaaccttggcgcaactggtaaagttgttgtcatgt 43334196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 8170163 - 8170123
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||| ||||||||||||||| |||||||||||||||||||    
T  8170163 gagggctaaccttggcgcaactggtaaagttgttgtcatgt 8170123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 23974735 - 23974774
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  23974735 gaggggtaaccttggcgcaa-cggtaaagttgttgtcatgt 23974774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 130
Target Start/End: Original strand, 35382484 - 35382528
Alignment:
Q  86 atgaaccttatagtgttagatttatgggagttgtgactacctatc 130  Q
    ||||| |||| |||||||||||| |||||||||||||||||||||    
T  35382484 atgaaacttacagtgttagatttctgggagttgtgactacctatc 35382528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 37024735 - 37024695
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||| ||||| |||||||||||||||||||    
T  37024735 gaggggtaaccttggtgcaactggtaaagttgttgtcatgt 37024695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 233
Target Start/End: Original strand, 41956886 - 41956924
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcat 233  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  41956886 gaggggtaacattggcgcaactggtaaagttgttgtcat 41956924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 21334262 - 21334311
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||||||||| ||||| | ||| ||||||||||||||| ||||||||||    
T  21334262 tgcaagttctaaaaatgtaaatgcatggaacactctttagaagtaaattg 21334311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 34134783 - 34134832
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||||||||||||||  | ||| ||||||||||||||| ||||||||||    
T  34134783 tgcaagttctagaaatataaatgcatggaacactctttagaagtaaattg 34134832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 2455124 - 2455068
Alignment:
Q  7 gaaacgatgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||| |||||||||||||||||| |  || | |||||||||| |||||||||||||    
T  2455124 gaaacaatgcaagttctagaaatgtagttgcacggaacactctatataagtaaattg 2455068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 26549933 - 26549877
Alignment:
Q  7 gaaacgatgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||| |||||||||||||||||| |  || | |||||||||| |||||||||||||    
T  26549933 gaaacaatgcaagttctagaaatgtagttgcacggaacactctatataagtaaattg 26549877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 28564199 - 28564255
Alignment:
Q  7 gaaacgatgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||| |||||||||||||||||| |  || | |||||||||| |||||||||||||    
T  28564199 gaaacaatgcaagttctagaaatgtagttgcacggaacactctatataagtaaattg 28564255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 5e-37; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 49717878 - 49717784
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    ||||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  49717878 ttggccatgaaccttacagtgttagatttctgggagttgtgactacctatctttaactgccgtacacttcgcctttgaatcacaagtcactcctc 49717784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 22455207 - 22455302
Alignment:
Q  80 ttggcaatgaaccttatagtgtt-agatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    ||||| |||||||||| | |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  22455207 ttggccatgaaccttacaatgtttagatttatgggagttgtgactacctatctttaattgtcgtacacttcgcctttgaagcacaagtcactcctc 22455302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 80 - 168
Target Start/End: Original strand, 21020319 - 21020406
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtca 168  Q
    ||||| |||||||||  ||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  21020319 ttggccatgaaccttgcagt-ttagatttatgggagttgtgactacctatctttcactgtcgtacacttcgcctttgaatcacaagtca 21020406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 14617015 - 14617055
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  14617015 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 14617055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 10668197 - 10668237
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  10668197 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 10668237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 18944620 - 18944660
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  18944620 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 18944660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 22930248 - 22930208
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  22930248 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 22930208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 34714600 - 34714640
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  34714600 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 34714640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 34725277 - 34725237
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  34725277 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 34725237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 32632737 - 32632699
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcat 233  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  32632737 gaggggtaaccttggcgcaactggtaaagttgttgtcat 32632699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 197 - 235
Target Start/End: Original strand, 40424721 - 40424759
Alignment:
Q  197 ggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  40424721 ggggtaaccttggcgcaactggtaaagttgttgtcatgt 40424759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 25290143 - 25290180
Alignment:
Q  198 gggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||||||| |||||||||||||||||||    
T  25290143 gggtaaccttggcgcaacaggtaaagttgttgtcatgt 25290180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 46248135 - 46248094
Alignment:
Q  194 cgaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||| |||| |||||||||||||||||||    
T  46248135 cgaggggtaaccttggctcaactggtaaagttgttgtcatgt 46248094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 19932933 - 19932893
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||| ||||||||||||| |||||||||||||||||||    
T  19932933 gaggggttaccttggcgcaactggtaaagttgttgtcatgt 19932893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 20004273 - 20004233
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||| ||||| |||||||||||||||||||    
T  20004273 gaggggtaaccttggtgcaactggtaaagttgttgtcatgt 20004233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 45812716 - 45812676
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  45812716 gaggggtaaccttggcgcaactgataaagttgttgtcatgt 45812676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 46991781 - 46991821
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||| ||||| |||||||||||||||||||    
T  46991781 gaggggtaaccttggtgcaactggtaaagttgttgtcatgt 46991821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 47214488 - 47214528
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  47214488 gaggggtaactttggcgcaactggtaaagttgttgtcatgt 47214528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 235
Target Start/End: Complemental strand, 18742137 - 18742102
Alignment:
Q  200 gtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||||| |||||||||||||||||||    
T  18742137 gtaaccttggcgcaactggtaaagttgttgtcatgt 18742102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 200 - 235
Target Start/End: Original strand, 45402077 - 45402112
Alignment:
Q  200 gtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||||| |||||||||||||||||||    
T  45402077 gtaaccttggcgcaactggtaaagttgttgtcatgt 45402112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 235
Target Start/End: Complemental strand, 30395903 - 30395869
Alignment:
Q  201 taaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||| |||||||||||||||||||    
T  30395903 taaccttggcgcaactggtaaagttgttgtcatgt 30395869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 235
Target Start/End: Original strand, 33222971 - 33223001
Alignment:
Q  205 cttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||||||||||||||||||||    
T  33222971 cttggcgcaaccggtaaagttgttgtcatgt 33223001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 21020257 - 21020306
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||||||||||||||  | ||| || |||||||||||||||||||||||    
T  21020257 tgcaagttctagaaatataaatgcatagaacactctttataagtaaattg 21020306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 8197020 - 8197060
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||| ||||| ||| |||||||||||||||    
T  8197020 gaggggtaaccttggtgcaactggtcaagttgttgtcatgt 8197060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 10163736 - 10163776
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||| |||||||||| | |||||||||||||||||    
T  10163736 gaggggtaacattggcgcaactgataaagttgttgtcatgt 10163776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 27474258 - 27474298
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||| || |||| |||||||||||||||||||    
T  27474258 gaggggtaaccttagctcaactggtaaagttgttgtcatgt 27474298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 38478461 - 38478421
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||||||||||  ||||| ||||||||||||    
T  38478461 gaggggtaaccttggcgcaactagtaaacttgttgtcatgt 38478421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 41319987 - 41319947
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||| | |||| |||||||||||||||||||    
T  41319987 gaggggtaaccttgacacaactggtaaagttgttgtcatgt 41319947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 3e-32; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 28109563 - 28109657
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    |||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||  |||||||||||||||||||||||||||||| ||||    
T  28109563 ttggcaatgaaccttacagtgttagatttctgggagttgtgactacatatctttaacttccgtacacttcgcctttgaatcacaagtcacacctc 28109657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 18139877 - 18139971
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    ||||| |||||||||| |||||||||||| |||||||||||||||||||||||||| ||| ||| |||||||||||||| ||||||| |||||||    
T  18139877 ttggccatgaaccttacagtgttagatttctgggagttgtgactacctatctttaattgtagtatacttcgcctttgaaacacaagttactcctc 18139971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 12982137 - 12982232
Alignment:
Q  80 ttggcaatgaaccttatagtgtt-agatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    ||||| |||||||||| | |||| |||||||||||||||||||||| ||||||||||||||||||||||| | ||||||| |||||||||||||||    
T  12982137 ttggccatgaaccttacaatgtttagatttatgggagttgtgactatctatctttaactgtcgtacactttgtctttgaagcacaagtcactcctc 12982232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 23380795 - 23380888
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    ||||| |||||||||| ||| |||||||| ||||||||| |||||||||||||| |||| ||||||||||||||||||| |||||||||||||||    
T  23380795 ttggccatgaaccttacagt-ttagatttctgggagttgagactacctatctttcactgccgtacacttcgcctttgaaacacaagtcactcctc 23380888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 23841469 - 23841563
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    ||||| ||||||||||  ||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||  ||||||| ||||||    
T  23841469 ttggccatgaaccttacggtgttagatttctgggagttgtgactacctatctttaattgttgtacacttcgcctttgaaagacaagtcgctcctc 23841563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 81 - 174
Target Start/End: Complemental strand, 12745006 - 12744915
Alignment:
Q  81 tggcaatgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttg-aatcacaagtcactcctc 174  Q
    |||| |||||||||| |||||||||||| |||||||||||||   |||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  12745006 tggccatgaaccttacagtgttagatttctgggagttgtgac---ctatctttaattgtcgtacacttcgcctttgaaatcacaagtcactcctc 12744915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 86 - 174
Target Start/End: Complemental strand, 22959204 - 22959116
Alignment:
Q  86 atgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    |||||||||| | |||||||||| |||||||||||||||||||||||||| || | |||||||||| |||||| |||| ||||||||||    
T  22959204 atgaaccttacaatgttagatttctgggagttgtgactacctatctttaattgccatacacttcgcttttgaaacacaggtcactcctc 22959116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 86 - 174
Target Start/End: Original strand, 23829188 - 23829276
Alignment:
Q  86 atgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    |||||||||| | |||||||||| |||||||||||||||||||||||||| || | |||||||||| |||||| |||| ||||||||||    
T  23829188 atgaaccttacaatgttagatttctgggagttgtgactacctatctttaattgccatacacttcgcttttgaaacacaggtcactcctc 23829276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 24408586 - 24408492
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttg-aatcacaagtcactcctc 174  Q
    ||||| ||||||||||||||  | ||| | |||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||    
T  24408586 ttggccatgaaccttatagttat-gatatctgggagttatgactacctatctttaactgtagtacacttcgcctttgaaatcacaagtcactcctc 24408492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 80 - 170
Target Start/End: Complemental strand, 14967839 - 14967750
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcact 170  Q
    ||||| |||||||||| |||||||||||| |||||||||||||||||||||   |  ||||||||||||||||||||||  ||||||||||    
T  14967839 ttggccatgaaccttacagtgttagatttctgggagttgtgactacctatc-acacatgtcgtacacttcgcctttgaaatacaagtcact 14967750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 170
Target Start/End: Complemental strand, 21632606 - 21632517
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcact 170  Q
    ||||| |||||||||| | |||||||||| || ||||||||||||||||||   |  |||||||||||||||||||||||  |||||||||    
T  21632606 ttggctatgaaccttacattgttagatttctgagagttgtgactacctatc-acatatgtcgtacacttcgcctttgaatttcaagtcact 21632517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 32111308 - 32111215
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    ||||| |||||||||| | |||||||||| |||||||||||| ||||||||   |  || |||||||||||||||||||  ||||||||||||||    
T  32111308 ttggctatgaaccttacaatgttagatttctgggagttgtgattacctatc-acacatgccgtacacttcgcctttgaaatacaagtcactcctc 32111215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 33923009 - 33922971
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcat 233  Q
    |||||||||||||||||||||||||||||||||||||||    
T  33923009 gaggggtaaccttggcgcaaccggtaaagttgttgtcat 33922971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 1354937 - 1354896
Alignment:
Q  194 cgaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  1354937 cgaggggtaaccttggcgcaactggtaaagttgttgtcatgt 1354896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 159
Target Start/End: Complemental strand, 25978367 - 25978295
Alignment:
Q  86 atgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaat 159  Q
    |||||||||| |||||||||| | |||||||||||||||||||||   |  |||||||||||||||||||||||    
T  25978367 atgaaccttacagtgttagatatctgggagttgtgactacctatc-acatatgtcgtacacttcgcctttgaat 25978295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 1346918 - 1346958
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  1346918 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 1346958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 12745076 - 12745020
Alignment:
Q  7 gaaacgatgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||| |||||||||||||||||| | ||| |||||||||||| |||||||||||||    
T  12745076 gaaacaatgcaagttctagaaatgtaaatgcatggaacactctatataagtaaattg 12745020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 14975261 - 14975221
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  14975261 gagggataaccttggcgcaaccggtaaagttgttgtcatgt 14975221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 22959279 - 22959223
Alignment:
Q  7 gaaacgatgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||| |||||||||||||||||| | ||| |||||||||||||||||| |||||||    
T  22959279 gaaacaatgcaagttctagaaatgtagatgcatggaacactctttataaataaattg 22959223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 23829113 - 23829169
Alignment:
Q  7 gaaacgatgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||| |||||||||||||||||| | ||| |||||||||||||||||| |||||||    
T  23829113 gaaacaatgcaagttctagaaatgtagatgcatggaacactctttataaataaattg 23829169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 23841400 - 23841456
Alignment:
Q  7 gaaacgatgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||| |||||||||||||||||| | ||| |||||||||||||||||| |||||||    
T  23841400 gaaacaatgcaagttctagaaatgtagatgcatggaacactctttataaataaattg 23841456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 197 - 235
Target Start/End: Complemental strand, 3815256 - 3815218
Alignment:
Q  197 ggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  3815256 ggggtaaccttggcgcaactggtaaagttgttgtcatgt 3815218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 233
Target Start/End: Original strand, 1941802 - 1941847
Alignment:
Q  188 cattttcgaggggtaaccttggcgcaaccggtaaagttgttgtcat 233  Q
    ||||| |||||||||||||||| ||||| |||||||||||||||||    
T  1941802 catttacgaggggtaaccttggtgcaactggtaaagttgttgtcat 1941847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 23380733 - 23380782
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||||||||||||||| | ||| ||||||||||||||| ||||||||||    
T  23380733 tgcaagttctagaaatgtaaatgcatggaacactctttaaaagtaaattg 23380782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 8409197 - 8409237
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||| ||||    
T  8409197 gaggggtaaccttggcgcaactggtaaagttgttgtaatgt 8409237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 9161077 - 9161117
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||| ||||| ||||||||||||||||||||    
T  9161077 gaggggtaaccttgacgcaatcggtaaagttgttgtcatgt 9161117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 18139808 - 18139864
Alignment:
Q  7 gaaacgatgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||| |||||||||||||||||| | ||| ||| |||||||||||||| |||||||    
T  18139808 gaaacaatgcaagttctagaaatgtagatgcatgaaacactctttataaataaattg 18139864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 28109500 - 28109550
Alignment:
Q  13 atgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    |||||||||||||||||| | ||  |||||||||||| |||||||||||||    
T  28109500 atgcaagttctagaaatgtagattcatggaacactctatataagtaaattg 28109550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 12982075 - 12982124
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||||||||||||||| | ||| || ||||||||| |||||||||||||    
T  12982075 tgcaagttctagaaatgtagatgcatagaacactctatataagtaaattg 12982124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 24408648 - 24408599
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||||||||||||||| | ||| |||||||| ||| |||||||||||||    
T  24408648 tgcaagttctagaaatgtaaatgcatggaacaatctatataagtaaattg 24408599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 235
Target Start/End: Complemental strand, 3116299 - 3116271
Alignment:
Q  207 tggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||||||||||||||||||    
T  3116299 tggcgcaaccggtaaagttgttgtcatgt 3116271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 15866218 - 15866178
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||||| |||| ||||||||||||| |||||    
T  15866218 gaggggtaaccttggcccaactggtaaagttgttggcatgt 15866178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 24734591 - 24734627
Alignment:
Q  199 ggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||| |||||||||| |||||||||||||||||||    
T  24734591 ggtaacattggcgcaactggtaaagttgttgtcatgt 24734627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 3e-32; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 7831852 - 7831758
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    ||||| || ||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7831852 ttggccataaaccttacagttttagatttctgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaaacacaagtcactcctc 7831758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 80 - 175
Target Start/End: Complemental strand, 10883066 - 10882972
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctca 175  Q
    ||||| |||||||||| ||| |||||||| |||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||||    
T  10883066 ttggccatgaaccttacagt-ttagatttctgggagttgtgactacctatctttcactgtcgtacagttcgcctttcaatcacaagtcactcctca 10882972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 2777071 - 2776978
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    ||||| |||||||||| ||| |||||||| ||||||||| |||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  2777071 ttggccatgaaccttacagt-ttagatttctgggagttgagactacctatctttcactgccgtacacttcgcctttgaatcacaagtcactcctc 2776978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 13556691 - 13556598
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    ||||| |||||||||| ||| |||||||| |||||||||| ||||||||||||| |||| ||||||||||||||||||| |||||||||||||||    
T  13556691 ttggccatgaaccttacagt-ttagatttctgggagttgttactacctatctttcactgccgtacacttcgcctttgaaacacaagtcactcctc 13556598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 24127076 - 24126983
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    ||||| |||||||||| ||| |||||||| |||||||||| ||||||||||||| |||| ||||||||||||||||||| |||||||||||||||    
T  24127076 ttggccatgaaccttacagt-ttagatttctgggagttgttactacctatctttcactgccgtacacttcgcctttgaaacacaagtcactcctc 24126983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 174
Target Start/End: Original strand, 36534670 - 36534743
Alignment:
Q  101 ttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    |||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||    
T  36534670 ttagatttctgggagttgtgactacctatctttcactgccgtacacttcgcctttgaaacacaagtcactcctc 36534743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 86 - 172
Target Start/End: Complemental strand, 10961495 - 10961409
Alignment:
Q  86 atgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcc 172  Q
    |||||||||| ||| |||||||| || ||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||    
T  10961495 atgaaccttacagtattagatttttgtgagttgtgactacctatctttaattgccgtacatttcgcctttgaaacacaagtcactcc 10961409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 86 - 172
Target Start/End: Complemental strand, 10965004 - 10964918
Alignment:
Q  86 atgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcc 172  Q
    |||||||||| ||| |||||||| || ||||||||||||||||||||||| || |||||| |||||||||||| |||||||||||||    
T  10965004 atgaaccttacagtattagatttttgtgagttgtgactacctatctttaattgccgtacatttcgcctttgaaacacaagtcactcc 10964918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 55033627 - 55033692
Alignment:
Q  110 tgggagttgtgactacctatctttaactgtcgtacacttcgcctttg-aatcacaagtcactcctc 174  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  55033627 tgggagttgtgactacctatctttaactgtcgtacacttcacctttgaaatcacaagtcactcctc 55033692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 28328907 - 28328843
Alignment:
Q  110 tgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| ||||||    
T  28328907 tgggagttgtgactacctatctttcactgtcgtacacttcgcctttgaaacacaagtcgctcctc 28328843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 112 - 174
Target Start/End: Original strand, 15197098 - 15197161
Alignment:
Q  112 ggagttgtgactacctatctttaactgtcgtacacttcgcctttg-aatcacaagtcactcctc 174  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||    
T  15197098 ggagttgtgactacctatctttaaatgtcgtacacttcgcctttgaaatcacaagtcactcctc 15197161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 47052986 - 47052921
Alignment:
Q  110 tgggagttgtgactacctatctttaactgtcgtacacttcgcctttg-aatcacaagtcactcctc 174  Q
    |||||||||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||    
T  47052986 tgggagttgtgactacctatatttaactgttgtacacttcgcctttgaaatcacaagtcactcctc 47052921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 80 - 169
Target Start/End: Complemental strand, 9156566 - 9156478
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcac 169  Q
    ||||| |||||||||| |||||||||||||||||||||| |||||||||||   |  |||||||| |||||||||||||  |||||||||    
T  9156566 ttggctatgaaccttaaagtgttagatttatgggagttgcgactacctatc-acacatgtcgtacgcttcgcctttgaaatacaagtcac 9156478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 22025818 - 22025754
Alignment:
Q  110 tgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    ||||||||||||||||||||||||  |||  ||| |||||||| |||||||||||||||||||||    
T  22025818 tgggagttgtgactacctatctttcgctgcagtatacttcgcccttgaatcacaagtcactcctc 22025754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 80 - 131
Target Start/End: Original strand, 19303300 - 19303351
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatct 131  Q
    ||||| ||||| |||| |||||||||||||||||||||||||||||||||||    
T  19303300 ttggccatgaaacttacagtgttagatttatgggagttgtgactacctatct 19303351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 15197006 - 15197055
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||||||||||||||| | ||| ||||||||||||||||||||||||||    
T  15197006 tgcaagttctagaaatgtaaatgcatggaacactctttataagtaaattg 15197055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 47053077 - 47053028
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||||||||||||||| | ||| ||||||||||||||||||||||||||    
T  47053077 tgcaagttctagaaatgtaaatgcatggaacactctttataagtaaattg 47053028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 194 - 235
Target Start/End: Complemental strand, 52926392 - 52926351
Alignment:
Q  194 cgaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  52926392 cgaggggtaaccttggcgcaactggtaaagttgttgtcatgt 52926351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 7697066 - 7697026
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  7697066 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 7697026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 8247870 - 8247830
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  8247870 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 8247830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 10870132 - 10870092
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  10870132 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 10870092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 13730785 - 13730745
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  13730785 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 13730745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 16735417 - 16735457
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  16735417 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 16735457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 40272993 - 40272953
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  40272993 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 40272953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 46421218 - 46421178
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  46421218 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 46421178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 12541941 - 12541990
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||||||||||||||| | ||| ||||||||||||||| ||||||||||    
T  12541941 tgcaagttctagaaatgtaaatgcatggaacactctttagaagtaaattg 12541990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 22025910 - 22025861
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||||||||||||||| | ||| ||||||||||||||| ||||||||||    
T  22025910 tgcaagttctagaaatgtaaatgcatggaacactctttagaagtaaattg 22025861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 81 - 130
Target Start/End: Original strand, 22995518 - 22995567
Alignment:
Q  81 tggcaatgaaccttatagtgttagatttatgggagttgtgactacctatc 130  Q
    |||| |||||||||| | |||||||||| |||||||||||||||||||||    
T  22995518 tggctatgaaccttacaatgttagatttctgggagttgtgactacctatc 22995567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 55033536 - 55033585
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||||||||||||||| | ||  ||||||||||||||||||||||||||    
T  55033536 tgcaagttctagaaatgtaaatacatggaacactctttataagtaaattg 55033585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 1217066 - 1217106
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| ||||||||||| |||||||    
T  1217066 gaggggtaaccttggcgcaactggtaaagttgtagtcatgt 1217106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 4495845 - 4495805
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||| ||||||| |||||||||||||||||||    
T  4495845 gaggggtaaccttcgcgcaactggtaaagttgttgtcatgt 4495805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 6412002 - 6411962
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||| |||||| |||||||||||||||||||    
T  6412002 gaggggtaaccttgacgcaactggtaaagttgttgtcatgt 6411962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 9607179 - 9607219
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||||||||||  ||||||||||||||||||    
T  9607179 gaggggtaaccttggcgcaacttgtaaagttgttgtcatgt 9607219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 12914216 - 12914176
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||| ||||    
T  12914216 gaggggtaaccttggcgcaactggtaaagttgttgtaatgt 12914176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 22609743 - 22609782
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  22609743 gaggggtaaccttggcgcaa-cggtaaagttgttgtcatgt 22609782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 195 - 234
Target Start/End: Original strand, 9276250 - 9276289
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatg 234  Q
    |||||||||||||||||||||  |||||||||||||||||    
T  9276250 gaggggtaaccttggcgcaactagtaaagttgttgtcatg 9276289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 235
Target Start/End: Complemental strand, 25517353 - 25517314
Alignment:
Q  196 aggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||| ||||||||||||||| |||||||||||||||||||    
T  25517353 agggataaccttggcgcaactggtaaagttgttgtcatgt 25517314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 235
Target Start/End: Complemental strand, 29366902 - 29366863
Alignment:
Q  196 aggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||||| ||| |||||||||||||||||||    
T  29366902 aggggtaaccttggcgtaactggtaaagttgttgtcatgt 29366863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 28328999 - 28328953
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaa 60  Q
    |||||||||||||| || | ||| |||||||||||||||||||||||    
T  28328999 tgcaagttctagaattgtaaatgcatggaacactctttataagtaaa 28328953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 10883127 - 10883078
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||||||| ||||||| | ||| ||||||||||||||| ||||||||||    
T  10883127 tgcaagttccagaaatgtaaatgcatggaacactctttagaagtaaattg 10883078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 21874999 - 21875036
Alignment:
Q  198 gggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  21874999 gggtaaccttgacgcaactggtaaagttgttgtcatgt 21875036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 23871418 - 23871455
Alignment:
Q  198 gggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  23871418 gggtaaccttggcgcaactagtaaagttgttgtcatgt 23871455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 2777132 - 2777084
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaatt 62  Q
    ||||||||||||||||| |  || ||||||||||||||| |||||||||    
T  2777132 tgcaagttctagaaatgtaagtgcatggaacactctttaaaagtaaatt 2777084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 10961569 - 10961513
Alignment:
Q  7 gaaacgatgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||| |||||||||||||||||| |  || | |||||||||| |||||||||||||    
T  10961569 gaaacaatgcaagttctagaaatgtagttgcacggaacactctatataagtaaattg 10961513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 10965078 - 10965022
Alignment:
Q  7 gaaacgatgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||| |||||||||||||||||| |  || | |||||||||| |||||||||||||    
T  10965078 gaaacaatgcaagttctagaaatgtagttgcacggaacactctatataagtaaattg 10965022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 227
Target Start/End: Original strand, 12525386 - 12525418
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgt 227  Q
    ||||||||||||||||||||| |||||||||||    
T  12525386 gaggggtaaccttggcgcaactggtaaagttgt 12525418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 18540965 - 18540909
Alignment:
Q  7 gaaacgatgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||| |||||||||||||||||| |  || | |||||||||| |||||||||||||    
T  18540965 gaaacaatgcaagttctagaaatgtagttgcacggaacactctatataagtaaattg 18540909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 24127137 - 24127089
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaatt 62  Q
    ||||||||||||||||| | ||| ||||||||||||| | |||||||||    
T  24127137 tgcaagttctagaaatgtaaatgcatggaacactcttaagaagtaaatt 24127089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 36534581 - 36534637
Alignment:
Q  7 gaaacgatgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||| ||||||||| || ||||| | | | ||||||||||||||||||||||||||    
T  36534581 gaaacaatgcaagttatataaatgtaaacgcatggaacactctttataagtaaattg 36534637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 39203492 - 39203532
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||||| ||||  ||||||||||||||||||    
T  39203492 gaggggtaaccttggcacaacttgtaaagttgttgtcatgt 39203532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 67; Significance: 7e-30; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 2022 - 2115
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    ||||| |||||||||| ||| |||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  2022 ttggccatgaaccttacagt-ttagatttctgggagttgtgactacctatctttcactgccgtacacttcgcctttgaatcacaagtcactcctc 2115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 1960 - 2009
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||||||||||||||| | ||| ||||||||||||||| ||||||||||    
T  1960 tgcaagttctagaaatgtaaatgcatggaacactctttagaagtaaattg 2009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 7e-30; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 24236579 - 24236486
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    ||||| |||||||||| ||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||    
T  24236579 ttggccatgaaccttacagt-ttagatttctgggagttgtgactacctatctttcactgtcgtacacttcgcctttgaaacacaagtcactcctc 24236486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 25872250 - 25872157
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    ||||| |||||||||| ||| |||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||    
T  25872250 ttggccatgaaccttacagt-ttagatttctgggagttgtgactacctatctttcactgccgtacacttcgcctttgaaacacaagtcactcctc 25872157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 101 - 174
Target Start/End: Original strand, 31429409 - 31429482
Alignment:
Q  101 ttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    |||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||| |||||||||||||||    
T  31429409 ttagatttctgggagttgtgactacctatctttcactgccgtacacttcgcctttgaaacacaagtcactcctc 31429482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 1505273 - 1505367
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttg-aatcacaagtcactcctc 174  Q
    ||||| |||||||||| ||| |||||||| ||||||||||||||||||||| |||||||  |||||||||||||||| ||||||||||||||||||    
T  1505273 ttggccatgaaccttacagt-ttagatttctgggagttgtgactacctatccttaactgcagtacacttcgcctttgaaatcacaagtcactcctc 1505367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 16789378 - 16789471
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    ||||| |||||||||| ||| |||||||| | |||||||||||||||||||||| |||| |||||||| |||||||||| |||||||||||||||    
T  16789378 ttggccatgaaccttacagt-ttagatttctaggagttgtgactacctatctttcactgccgtacactgcgcctttgaaacacaagtcactcctc 16789471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 45455348 - 45455254
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagtt-gtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    ||||| |||||||||| ||| |||||||| |||||||| |||||||||||||||| |||| ||||||||| || ||||||||||||||||||||||    
T  45455348 ttggccatgaaccttacagt-ttagatttctgggagtttgtgactacctatctttcactgccgtacactttgcatttgaatcacaagtcactcctc 45455254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 112 - 173
Target Start/End: Original strand, 13973804 - 13973865
Alignment:
Q  112 ggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcct 173  Q
    |||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||||    
T  13973804 ggagttgtgactacctatctttcactgccgtacacttcacctttgaatcacaagtcactcct 13973865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 25958337 - 25958430
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    ||||| |||||||||| ||| |||||||| ||||||||| |||| |||||  || |||| ||||||||||||||||||| |||||||||||||||    
T  25958337 ttggctatgaaccttacagt-ttagatttctgggagttgagacttcctattcttcactgccgtacacttcgcctttgaaacacaagtcactcctc 25958430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 192 - 235
Target Start/End: Original strand, 9671131 - 9671174
Alignment:
Q  192 ttcgaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  9671131 ttcgaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 9671174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 174
Target Start/End: Original strand, 9187332 - 9187379
Alignment:
Q  127 tatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||    
T  9187332 tatctttaactgtcgtacatttcgcctttgaaacacaagtcactcctc 9187379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 9187245 - 9187294
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||||||||||||||| | ||| ||||||||||||||||||||||||||    
T  9187245 tgcaagttctagaaatgtaaatgcatggaacactctttataagtaaattg 9187294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 8455497 - 8455457
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  8455497 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 8455457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 12024099 - 12024059
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  12024099 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 12024059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 14530272 - 14530312
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  14530272 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 14530312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 25079899 - 25079859
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  25079899 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 25079859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 39189602 - 39189562
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  39189602 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 39189562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 197 - 235
Target Start/End: Original strand, 11514392 - 11514430
Alignment:
Q  197 ggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  11514392 ggggtaaccttggcgcaactggtaaagttgttgtcatgt 11514430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 16789316 - 16789366
Alignment:
Q  13 atgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    |||||||||||||||||| | ||| ||||||||||||||| ||||||||||    
T  16789316 atgcaagttctagaaatgtaaatgcatggaacactctttagaagtaaattg 16789366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 13973712 - 13973761
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||||||||||||||| | ||| ||||||||||||||| ||||||||||    
T  13973712 tgcaagttctagaaatgtaaatgtatggaacactctttagaagtaaattg 13973761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 194 - 235
Target Start/End: Original strand, 17705448 - 17705489
Alignment:
Q  194 cgaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||||| ||||| |||||||||||||||||||    
T  17705448 cgaggggtaaccttggtgcaactggtaaagttgttgtcatgt 17705489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 25958276 - 25958325
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||||||||||||||| | ||| ||||||||||||||| ||||||||||    
T  25958276 tgcaagttctagaaatgtaaatgcatggaacactctttagaagtaaattg 25958325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 31429328 - 31429377
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||||||||||||||| | ||| ||||||||||||||| ||||||||||    
T  31429328 tgcaagttctagaaatgtaaatgcatggaacactctttagaagtaaattg 31429377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 1505212 - 1505260
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaatt 62  Q
    ||||||||||||||||| | ||| ||||||||||||||| |||||||||    
T  1505212 tgcaagttctagaaatgtaaatgcatggaacactctttagaagtaaatt 1505260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 21779440 - 21779400
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  21779440 gaggggtaaccttggcgcaactggtgaagttgttgtcatgt 21779400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 22371011 - 22371051
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  22371011 gaggggtaaccttggcccaactggtaaagttgttgtcatgt 22371051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 23397720 - 23397760
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||| ||||| |||||||||||||||||||    
T  23397720 gaggggtaaccttggtgcaactggtaaagttgttgtcatgt 23397760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 235
Target Start/End: Original strand, 10543653 - 10543692
Alignment:
Q  196 aggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||||||||| | |||||||||||||||||    
T  10543653 aggggtaaccttggcgcaactgataaagttgttgtcatgt 10543692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 235
Target Start/End: Original strand, 14544018 - 14544057
Alignment:
Q  196 aggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||||||||  |||||||||||||||||||    
T  14544018 aggggtaaccttggcgcaattggtaaagttgttgtcatgt 14544057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 235
Target Start/End: Original strand, 17896215 - 17896253
Alignment:
Q  197 ggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||| |||||| |||||||||||||||||||    
T  17896215 ggggtaaccttgacgcaactggtaaagttgttgtcatgt 17896253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 235
Target Start/End: Original strand, 27573581 - 27573615
Alignment:
Q  201 taaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||| |||||||||||||||||||    
T  27573581 taaccttggcgcaactggtaaagttgttgtcatgt 27573615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 24236640 - 24236591
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    |||||||||||||||||   ||| ||||||||||||||| ||||||||||    
T  24236640 tgcaagttctagaaatgtgaatgcatggaacactctttagaagtaaattg 24236591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 25249915 - 25249878
Alignment:
Q  198 gggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||||||  |||||||||||||||||||    
T  25249915 gggtaaccttggcgcaattggtaaagttgttgtcatgt 25249878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 25872311 - 25872262
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||||||||||||||| |  || ||||||||||||||| ||||||||||    
T  25872311 tgcaagttctagaaatgtaattgcatggaacactctttagaagtaaattg 25872262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 45455409 - 45455360
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||||||||||||||| | ||| ||||||||||||||  ||||||||||    
T  45455409 tgcaagttctagaaatgtatatgcatggaacactctttggaagtaaattg 45455360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 7214488 - 7214528
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||| ||||| |||| |||||||||||||||||||    
T  7214488 gaggggtaactttggcacaactggtaaagttgttgtcatgt 7214528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 26684803 - 26684763
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||| || ||||||| |||||||||||||||||||    
T  26684803 gaggggtaactttagcgcaactggtaaagttgttgtcatgt 26684763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 27466311 - 27466271
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||| ||||| |||||||||| |||||||||||||||||||    
T  27466311 gaggcgtaacattggcgcaactggtaaagttgttgtcatgt 27466271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 174
Target Start/End: Original strand, 4743 - 4900
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattgnnnnnnnnnnnnnnnnttggcaatgaaccttatagtgtt-agatttatgg 112  Q
    ||||||||||||||||| | ||| ||||||||||||||||||||||||||                ||||| |||||||||| |||||| |||||| |||    
T  4743 tgcaagttctagaaatgtaaatgcatggaacactctttataagtaaattggaaaaataaaat----ttggccatgaaccttacagtgtttagatttctgg 4838  T
Q  113 gagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    |||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||    
T  4839 gagttgtgactacctatctttaactaccgtacacttcgcctttgaaacacaagtcactcctc 4900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 64; Significance: 4e-28; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 80 - 171
Target Start/End: Complemental strand, 5672064 - 5671974
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactc 171  Q
    ||||| |||||||||| ||| |||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  5672064 ttggccatgaaccttacagt-ttagatttctgggagttgtgactacctatctttcactgccgtacacttcgcctttgaatcacaagtcactc 5671974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 80 - 172
Target Start/End: Original strand, 19862132 - 19862225
Alignment:
Q  80 ttggcaatgaaccttatagtgtt-agatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcc 172  Q
    ||||| |||||||||| | |||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  19862132 ttggccatgaaccttacaatgtttagatttctgggagttgtgactacctatctttaactgccgtacacttcgcctttgaaacacaagtcactcc 19862225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 56197033 - 56196939
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttg-aatcacaagtcactcctc 174  Q
    ||||| |||||||||| ||| |||||||| |||||||||||||||||||||||| |||| ||||||||||||||||| ||||||||||||||||||    
T  56197033 ttggccatgaaccttacagt-ttagatttctgggagttgtgactacctatctttcactgccgtacacttcgcctttgaaatcacaagtcactcctc 56196939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 27678928 - 27679021
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    ||||| |||||||||| ||| |||||||| |||||||||||||||||||||||| |||| | ||||||||||||| |||||||||||||||||||    
T  27678928 ttggccatgaaccttacagt-ttagatttctgggagttgtgactacctatctttcactgccatacacttcgccttcgaatcacaagtcactcctc 27679021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 39499934 - 39499841
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    ||||| |||||||||| ||| |||||||| ||||||||| |||||||||||||| |||| ||||||||||||||||||| |||||||||||||||    
T  39499934 ttggccatgaaccttacagt-ttagatttctgggagttgagactacctatctttcactgccgtacacttcgcctttgaaacacaagtcactcctc 39499841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 19825794 - 19825729
Alignment:
Q  110 tgggagttgtgactacctatctttaactgtcgtacacttcgcctttg-aatcacaagtcactcctc 174  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  19825794 tgggagttgtgactacctatctttaactgccgtacacttcgcctttgaaatcacaagtcactcctc 19825729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 3799793 - 3799857
Alignment:
Q  110 tgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    |||||||||||||||||||||||||| || ||||||||||| |||||||||| ||||||||||||    
T  3799793 tgggagttgtgactacctatctttaattgccgtacacttcgtctttgaatcataagtcactcctc 3799857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 49638467 - 49638531
Alignment:
Q  110 tgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    |||||||||||||||||||||||| | || ||| |||||||||||||||||||||||||||||||    
T  49638467 tgggagttgtgactacctatctttcattgccgtgcacttcgcctttgaatcacaagtcactcctc 49638531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 17315476 - 17315439
Alignment:
Q  198 gggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17315476 gggtaaccttggcgcaaccggtaaagttgttgtcatgt 17315439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 20224933 - 20224978
Alignment:
Q  190 ttttcgaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||    
T  20224933 tttttgaggggtaaccttggcgcaactggtaaagttgttgtcatgt 20224978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 5648213 - 5648253
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  5648213 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 5648253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 6430806 - 6430766
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  6430806 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 6430766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 10660358 - 10660398
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  10660358 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 10660398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 10874503 - 10874543
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  10874503 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 10874543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 23501747 - 23501787
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  23501747 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 23501787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 48599004 - 48598964
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  48599004 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 48598964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 13256583 - 13256538
Alignment:
Q  190 ttttcgaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||| ||||||||||||||| ||||| |||||||||||||||||||    
T  13256583 ttttagaggggtaaccttggtgcaactggtaaagttgttgtcatgt 13256538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 16911519 - 16911556
Alignment:
Q  198 gggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||||||| |||||||||||||||||||    
T  16911519 gggtaaccttggcgcaactggtaaagttgttgtcatgt 16911556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 18969698 - 18969735
Alignment:
Q  198 gggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||||||| |||||||||||||||||||    
T  18969698 gggtaaccttggcgcaactggtaaagttgttgtcatgt 18969735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 19825885 - 19825836
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||||||||||||||| | ||| |||||||||||| |||||||||||||    
T  19825885 tgcaagttctagaaatgtaaatgcatggaacactctatataagtaaattg 19825836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 19862070 - 19862119
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||||||||||||||| | ||| |||||||||||| |||||||||||||    
T  19862070 tgcaagttctagaaatgtaaatgcatggaacactctatataagtaaattg 19862119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 27678867 - 27678916
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||||||||||||||| | ||| ||||||||||||||| ||||||||||    
T  27678867 tgcaagttctagaaatgtaaatgcatggaacactctttagaagtaaattg 27678916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 39499995 - 39499946
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||||||||||||||| | ||| ||||||||||||||| ||||||||||    
T  39499995 tgcaagttctagaaatgtaaatgcatggaacactctttaaaagtaaattg 39499946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 49638368 - 49638421
Alignment:
Q  7 gaaacgatgcaagttctagaaatgcacatgaatggaacactctttataagtaaa 60  Q
    ||||| ||||||||| |||||||| | ||| |||||||||||||||||||||||    
T  49638368 gaaacaatgcaagttttagaaatgtaaatgcatggaacactctttataagtaaa 49638421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 5306844 - 5306804
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||| ||||||||    
T  5306844 gaggggtaaccttggcgcaactggtaaagttgatgtcatgt 5306804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 5672125 - 5672077
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaatt 62  Q
    ||||||||||||||||| | ||| ||||||||||||||| |||||||||    
T  5672125 tgcaagttctagaaatgtaaatgcatggaacactctttagaagtaaatt 5672077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 11054327 - 11054287
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  11054327 gaggggtaactttggcgcaactggtaaagttgttgtcatgt 11054287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 14590795 - 14590831
Alignment:
Q  199 ggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||| |||||||||||||||||||    
T  14590795 ggtaaccttggcgcaactggtaaagttgttgtcatgt 14590831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 20405047 - 20405087
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||| |||||| |||||||||||||||||||    
T  20405047 gaggggtaaccttgacgcaactggtaaagttgttgtcatgt 20405087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 21646918 - 21646958
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||| ||||||||||||||| |||||||||||||||||||    
T  21646918 gagggataaccttggcgcaactggtaaagttgttgtcatgt 21646958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 231
Target Start/End: Original strand, 30639334 - 30639370
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtc 231  Q
    ||||||||||||||||||||| |||||||||||||||    
T  30639334 gaggggtaaccttggcgcaactggtaaagttgttgtc 30639370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 47528709 - 47528669
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||| ||||| |||||||||||||||||||    
T  47528709 gaggggtaaccttggtgcaactggtaaagttgttgtcatgt 47528669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 55766647 - 55766607
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||| |||||| |||||||||||||||||||    
T  55766647 gaggggtaaccttgacgcaactggtaaagttgttgtcatgt 55766607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 55830902 - 55830862
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||| |||||| |||||||||||||||||||    
T  55830902 gaggggtaaccttgacgcaactggtaaagttgttgtcatgt 55830862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 56197095 - 56197047
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaatt 62  Q
    ||||||||||||||||| | ||| ||||||||||||||| |||||||||    
T  56197095 tgcaagttctagaaatgtaaatgcatggaacactctttagaagtaaatt 56197047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 3799702 - 3799751
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||||||||||||||| | ||| ||  ||||||||||||||||||||||    
T  3799702 tgcaagttctagaaatgtaaatgcataaaacactctttataagtaaattg 3799751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 5313172 - 5313135
Alignment:
Q  198 gggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||| ||| |||||||||||||||||||    
T  5313172 gggtaaccttggcgtaactggtaaagttgttgtcatgt 5313135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 15432906 - 15432955
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||||||||||||||| | ||| |||||| |||||||| ||||||||||    
T  15432906 tgcaagttctagaaatgtaaatgcatggaaaactctttagaagtaaattg 15432955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 16408777 - 16408744
Alignment:
Q  202 aaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||| |||||||||||||||||||    
T  16408777 aaccttggcgcaactggtaaagttgttgtcatgt 16408744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 235
Target Start/End: Original strand, 54730206 - 54730243
Alignment:
Q  198 gggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||| ||||||||| ||||||||||||||||||||    
T  54730206 gggtaactttggcgcaatcggtaaagttgttgtcatgt 54730243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 200 - 232
Target Start/End: Complemental strand, 30352767 - 30352735
Alignment:
Q  200 gtaaccttggcgcaaccggtaaagttgttgtca 232  Q
    |||||||||||||||| ||||||||||||||||    
T  30352767 gtaaccttggcgcaactggtaaagttgttgtca 30352735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 63; Significance: 2e-27; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 45289103 - 45289196
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    ||||| |||||||||| | | |||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||    
T  45289103 ttggccatgaaccttacatt-ttagatttctgggagttgtgactacctatctttcactgccgtacacttcgcctttgaatcacaagtcactcctc 45289196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 14 - 174
Target Start/End: Original strand, 26137652 - 26137807
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattgnnnnnnnnnnnnnnnnttggcaatgaaccttatagtgttagatttatggg 113  Q
    ||||||||||||||||| | ||| ||||||||||||||||||||||||||                ||||| |||||||||| |||  | ||||| ||||    
T  26137652 tgcaagttctagaaatgtaaatgcatggaacactctttataagtaaattggaaaaggaaaat----ttggccatgaaccttacagttat-gatttctggg 26137746  T
Q  114 agttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    ||||||||||||||||||||  ||| ||||||||||||| |||||||||||||||||||||    
T  26137747 agttgtgactacctatctttcgctgccgtacacttcgcccttgaatcacaagtcactcctc 26137807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 20594931 - 20594838
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    ||||| |||||||||| ||| |||||||| || ||| ||||||||||||||||| |||| |||||||||||||||||||| |||| |||||||||    
T  20594931 ttggccatgaaccttacagt-ttagatttctgtgagctgtgactacctatctttcactgccgtacacttcgcctttgaattacaattcactcctc 20594838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 110 - 170
Target Start/End: Complemental strand, 4543946 - 4543886
Alignment:
Q  110 tgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcact 170  Q
    ||||||||||||||||||||||||  ||| ||||||||||||||||||| |||||||||||    
T  4543946 tgggagttgtgactacctatctttctctgccgtacacttcgcctttgaaacacaagtcact 4543886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 174
Target Start/End: Original strand, 22231273 - 22231343
Alignment:
Q  104 gatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    ||||| ||| |||||||||||||||||||| |||| | |||||||||||||| || |||||||||||||||    
T  22231273 gatttctggaagttgtgactacctatctttcactgccatacacttcgcctttaaaacacaagtcactcctc 22231343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 174
Target Start/End: Complemental strand, 22255466 - 22255396
Alignment:
Q  104 gatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    ||||| ||| |||||||||||||||||||| |||| | |||||||||||||| || |||||||||||||||    
T  22255466 gatttctggaagttgtgactacctatctttcactgccatacacttcgcctttaaaacacaagtcactcctc 22255396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 174
Target Start/End: Original strand, 9274974 - 9275063
Alignment:
Q  86 atgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatca-caagtcactcctc 174  Q
    |||||||||| |||||||||||| |||||||||||||| ||||||    ||||||||||||||| | ||| || || |||||||||||||    
T  9274974 atgaaccttacagtgttagatttctgggagttgtgacttcctatccggcactgtcgtacacttcactttttaaacatcaagtcactcctc 9275063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 2541201 - 2541161
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  2541201 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 2541161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 12473258 - 12473298
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  12473258 gaggggtagccttggcgcaaccggtaaagttgttgtcatgt 12473298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 21172188 - 21172148
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  21172188 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 21172148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 32758215 - 32758255
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  32758215 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 32758255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 42798623 - 42798663
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  42798623 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 42798663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 46354148 - 46354188
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  46354148 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 46354188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 47078034 - 47077994
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  47078034 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 47077994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 48735302 - 48735262
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  48735302 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 48735262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 235
Target Start/End: Original strand, 18326989 - 18327028
Alignment:
Q  196 aggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  18326989 aggggtaaccttggcgcaactggtaaagttgttgtcatgt 18327028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 189 - 235
Target Start/End: Complemental strand, 2663118 - 2663072
Alignment:
Q  189 attttcgaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||||||||||||||||  ||||||||||||| ||||    
T  2663118 attttcgaggggtaaccttggcgcaactagtaaagttgttgttatgt 2663072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 4544038 - 4543992
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaa 60  Q
    ||||||||||||||||| | ||| |||||||||||||||||||||||    
T  4544038 tgcaagttctagaaatgtaaatgcatggaacactctttataagtaaa 4543992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 60
Target Start/End: Original strand, 22231187 - 22231233
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaa 60  Q
    ||||||||||||||||| | ||| |||||||||||||||||||||||    
T  22231187 tgcaagttctagaaatgtaaatgcatggaacactctttataagtaaa 22231233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 22255552 - 22255506
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaa 60  Q
    ||||||||||||||||| | ||| |||||||||||||||||||||||    
T  22255552 tgcaagttctagaaatgtaaatgcatggaacactctttataagtaaa 22255506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 201 - 235
Target Start/End: Original strand, 40463837 - 40463871
Alignment:
Q  201 taaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||||||||||||||||||||||||    
T  40463837 taaccttggcgcaaccggtaaagttgttgtcatgt 40463871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 195 - 233
Target Start/End: Complemental strand, 42496016 - 42495978
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcat 233  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  42496016 gaggggtaaccttggcgcaactggtaaagttgttgtcat 42495978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 45289041 - 45289090
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||||||||||||||| | ||| ||||||||||||||| ||||||||||    
T  45289041 tgcaagttctagaaatgtaaatgcatggaacactctttagaagtaaattg 45289090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 14732999 - 14732963
Alignment:
Q  199 ggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||| |||||||||||||||||||    
T  14732999 ggtaaccttggcgcaactggtaaagttgttgtcatgt 14732963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 22699151 - 22699111
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||| |||||| |||||||||||||||||||    
T  22699151 gaggggtaaccttgacgcaactggtaaagttgttgtcatgt 22699111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 34626388 - 34626348
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||| ||||||| |||||||||||||||||||    
T  34626388 gaggggtaaccttagcgcaactggtaaagttgttgtcatgt 34626348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 35334995 - 35334955
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||| ||||||||||||||| |||||||||||||||||||    
T  35334995 gagggataaccttggcgcaactggtaaagttgttgtcatgt 35334955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 42805478 - 42805518
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||| ||| |||||||||||||||||||    
T  42805478 gaggggtaaccttggcgtaactggtaaagttgttgtcatgt 42805518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 43557426 - 43557466
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||| |||||| |||||||||||||||||||    
T  43557426 gaggggtaaccttgccgcaactggtaaagttgttgtcatgt 43557466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 196 - 235
Target Start/End: Complemental strand, 5180337 - 5180298
Alignment:
Q  196 aggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||| |||||| |||||||||||||||||||    
T  5180337 aggggtaaccttgacgcaactggtaaagttgttgtcatgt 5180298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 20594991 - 20594944
Alignment:
Q  16 caagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||||||||||| | | ||| ||||||||||||||||||||||||||    
T  20594991 caagttctagaaaagtaaatgcatggaacactctttataagtaaattg 20594944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 9274898 - 9274951
Alignment:
Q  7 gaaacgatgcaagttctagaaatgcacatgaatggaacactctttataagtaaa 60  Q
    ||||| |||||||||||||||||| |  || |||||||||||| ||||||||||    
T  9274898 gaaacaatgcaagttctagaaatgtagttgcatggaacactctatataagtaaa 9274951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 29140538 - 29140501
Alignment:
Q  198 gggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  29140538 gggtaatcttggcgcaactggtaaagttgttgtcatgt 29140501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 231
Target Start/End: Complemental strand, 35787416 - 35787383
Alignment:
Q  198 gggtaaccttggcgcaaccggtaaagttgttgtc 231  Q
    |||||||||||| |||||||||||||||||||||    
T  35787416 gggtaaccttggtgcaaccggtaaagttgttgtc 35787383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 7193039 - 7193079
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||| |||  ||||||||||||||||||    
T  7193039 gaggggtaaccttggcgtaacttgtaaagttgttgtcatgt 7193079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 21447544 - 21447584
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| | |||| ||||||||||||    
T  21447544 gaggggtaaccttggcgcaactgataaatttgttgtcatgt 21447584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 42476827 - 42476867
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||| |||||| ||| |||||||||||||||||||    
T  42476827 gaggggtaacattggcgtaactggtaaagttgttgtcatgt 42476867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 174
Target Start/End: Original strand, 10940 - 11096
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattgnnnnnnnnnnnnnnnnttggcaatgaaccttatagtgtt-agatttatgg 112  Q
    ||||||||||||||||| | ||| ||||||||||||||||||||||||||                ||||| ||||||| || |||||| |||||||||     
T  10940 tgcaagttctagaaatgaaaatgcatggaacactctttataagtaaattggaatataaaat-----ttggccatgaaccgtacagtgtttagatttatga 11034  T
Q  113 gagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||    
T  11035 gagttgtgactacctatctttaactgccgtacacttcgcctttgaaacacaagtcgctcctc 11096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 4e-25; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 80 - 174
Target Start/End: Original strand, 33879214 - 33879307
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    ||||| |||||||||| ||| |||||||| |||||||||||||||||||||||| |||| | ||||||||||||| |||||||||||||||||||    
T  33879214 ttggccatgaaccttacagt-ttagatttctgggagttgtgactacctatctttcactgccatacacttcgccttagaatcacaagtcactcctc 33879307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 80 - 171
Target Start/End: Original strand, 38250308 - 38250398
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactc 171  Q
    ||||| |||||||||| ||| ||||||||   |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||    
T  38250308 ttggccatgaaccttacagt-ttagattttgtggagttgtgactacctatttttaactgccgtacacttcgcctttgaatcacaagtcactc 38250398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 25593547 - 25593612
Alignment:
Q  110 tgggagttgtgactacctatctttaactgtcgtacacttcgccttt-gaatcacaagtcactcctc 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  25593547 tgggagttgtgactacctatctttaactgtcgtacacttcgcctttaaaatcacaagtcactcctc 25593612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 111 - 174
Target Start/End: Complemental strand, 23645300 - 23645236
Alignment:
Q  111 gggagttgtgactacctatctttaactgtcgtacacttcgcctttg-aatcacaagtcactcctc 174  Q
    |||||||||||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||    
T  23645300 gggagttgtgactacctatctttaactgccatacacttcgcctttgaaatcacaagtcactcctc 23645236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 174
Target Start/End: Complemental strand, 12584476 - 12584416
Alignment:
Q  114 agttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    |||||||||| |||||||||||||| ||||||||||  |||| ||||||||||||||||||    
T  12584476 agttgtgactgcctatctttaactgccgtacacttcatctttaaatcacaagtcactcctc 12584416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 17929321 - 17929226
Alignment:
Q  80 ttggcaatgaaccttatagtgtt-agatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    ||||| |||||||||| |||||| |||||| | ||||||||| ||| |||| ||||| ||  |||||||||||||||||| || ||||||||||||    
T  17929321 ttggccatgaaccttacagtgtttagatttctaggagttgtggctaactatatttaaatgcggtacacttcgcctttgaaacaaaagtcactcctc 17929226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 190 - 235
Target Start/End: Complemental strand, 12670434 - 12670389
Alignment:
Q  190 ttttcgaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||    
T  12670434 ttttagaggggtaaccttggcgcaactggtaaagttgttgtcatgt 12670389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 23645392 - 23645343
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||||||||||||||| | ||| ||||||||||||||||||||||||||    
T  23645392 tgcaagttctagaaatgtaaatgcatggaacactctttataagtaaattg 23645343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 7136710 - 7136670
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  7136710 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 7136670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 30454276 - 30454236
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  30454276 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 30454236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 35261633 - 35261673
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  35261633 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 35261673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 39658679 - 39658742
Alignment:
Q  110 tgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    |||||||||||||||||||||  | | || || ||||||||||||||||||||||||||||||||    
T  39658679 tgggagttgtgactacctatcactta-tgccgaacacttcgcctttgaatcacaagtcactcctc 39658742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 14 - 61
Target Start/End: Complemental strand, 12584571 - 12584524
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaat 61  Q
    ||||||||||||||||| | ||| ||||||||||||||||||||||||    
T  12584571 tgcaagttctagaaatgtaaatgcatggaacactctttataagtaaat 12584524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 39461177 - 39461138
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatg 234  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  39461177 gaggggtaaccttggcgcaactggtaaagttgttgtcatg 39461138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 130
Target Start/End: Complemental strand, 31983169 - 31983119
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatc 130  Q
    ||||| ||||||||||  ||||||||||| |||||||||||||||||||||    
T  31983169 ttggctatgaaccttacggtgttagatttctgggagttgtgactacctatc 31983119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 190 - 235
Target Start/End: Original strand, 17823525 - 17823570
Alignment:
Q  190 ttttcgaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||| ||||||||| ||||||||||| |||||||||||||||||||    
T  17823525 tttttgaggggtaatcttggcgcaactggtaaagttgttgtcatgt 17823570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 130
Target Start/End: Original strand, 22224265 - 22224306
Alignment:
Q  89 aaccttatagtgttagatttatgggagttgtgactacctatc 130  Q
    ||||||| |||||||||||| |||||||||||||||||||||    
T  22224265 aaccttacagtgttagatttctgggagttgtgactacctatc 22224306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 130
Target Start/End: Original strand, 22230607 - 22230648
Alignment:
Q  89 aaccttatagtgttagatttatgggagttgtgactacctatc 130  Q
    ||||||| |||||||||||| |||||||||||||||||||||    
T  22230607 aaccttacagtgttagatttctgggagttgtgactacctatc 22230648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 23945727 - 23945776
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||||||||| ||||||| ||| ||||||||||||||| ||||||||||    
T  23945727 tgcaagttctaaaaatgcaaatgcatggaacactctttagaagtaaattg 23945776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 25593457 - 25593506
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||||||||||||||| | ||| ||||||||||||||| ||||||||||    
T  25593457 tgcaagttctagaaatgtaaatgcatggaacactctttagaagtaaattg 25593506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 33879153 - 33879202
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||||||||||||||| | ||| ||| ||||||||||||||||||||||    
T  33879153 tgcaagttctagaaatgtaaatgcatgaaacactctttataagtaaattg 33879202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 2626473 - 2626513
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||  |||||||||||||||||||    
T  2626473 gaggggtaaccttggcgcaattggtaaagttgttgtcatgt 2626513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 13160656 - 13160696
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  13160656 gaggggtaacctcggcgcaactggtaaagttgttgtcatgt 13160696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 18164940 - 18164900
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||| ||||||||||||||| |||||||||||||||    
T  18164940 gaggggtaatcttggcgcaaccggtgaagttgttgtcatgt 18164900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 20869677 - 20869637
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||| ||||||||||||||| |||||||||||||||||||    
T  20869677 gagggataaccttggcgcaactggtaaagttgttgtcatgt 20869637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 23286474 - 23286434
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||| |||||| |||||||||||||||||||    
T  23286474 gaggggtaaccttgtcgcaactggtaaagttgttgtcatgt 23286434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 24245405 - 24245445
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||| ||||| |||||||||||||||||||    
T  24245405 gaggggtaaccttggggcaactggtaaagttgttgtcatgt 24245445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 28817807 - 28817767
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||| ||||| |||||||||||||||||||    
T  28817807 gaggggtaaccttggtgcaactggtaaagttgttgtcatgt 28817767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 36720750 - 36720790
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||| ||| |||||||||||||||||||    
T  36720750 gaggggtaaccttggcgtaactggtaaagttgttgtcatgt 36720790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 38250239 - 38250295
Alignment:
Q  7 gaaacgatgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||| |||||||||||||||||| | | | |||||||||||| |||||||||||||    
T  38250239 gaaacaatgcaagttctagaaatgtaaaagcatggaacactctatataagtaaattg 38250295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 40605086 - 40605046
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  40605086 gaggggtaactttggcgcaactggtaaagttgttgtcatgt 40605046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 44530103 - 44530143
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||| ||||||||    
T  44530103 gaggggtaaccttggcgcaactggtaaagttgctgtcatgt 44530143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 62
Target Start/End: Complemental strand, 17929390 - 17929335
Alignment:
Q  7 gaaacgatgcaagttctagaaatgcacatgaatggaacactctttataagtaaatt 62  Q
    ||||| |||||| ||||||||||| | | | |||||||||||||||||||||||||    
T  17929390 gaaacaatgcaacttctagaaatgtaaaaggatggaacactctttataagtaaatt 17929335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 23945794 - 23945840
Alignment:
Q  86 atgaaccttatagtgttagatttatgggagttgtgactacctatcttt 133  Q
    |||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  23945794 atgaaccttacagt-ttagatttctgggagttgtgactacctatcttt 23945840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 235
Target Start/End: Original strand, 31454144 - 31454182
Alignment:
Q  197 ggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||| |||||||||||||||| ||||||||||||||    
T  31454144 ggggtaatcttggcgcaaccggtatagttgttgtcatgt 31454182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 231
Target Start/End: Complemental strand, 29521871 - 29521830
Alignment:
Q  190 ttttcgaggggtaaccttggcgcaaccggtaaagttgttgtc 231  Q
    |||| ||||||||||||||||||||| | |||||||||||||    
T  29521871 ttttagaggggtaaccttggcgcaactgataaagttgttgtc 29521830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 42840863 - 42840900
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtca 232  Q
    |||||||||||||||||||||  |||||||||||||||    
T  42840863 gaggggtaaccttggcgcaactagtaaagttgttgtca 42840900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 20284250 - 20284214
Alignment:
Q  199 ggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||| |||||| |||||||||||||||||||    
T  20284250 ggtaaccttgacgcaacgggtaaagttgttgtcatgt 20284214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 21070879 - 21070843
Alignment:
Q  199 ggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||| |||||| |||||||||||||||||||    
T  21070879 ggtaaccttgacgcaacgggtaaagttgttgtcatgt 21070843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 22224188 - 22224244
Alignment:
Q  7 gaaacgatgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||| |||||||||||||||||| |  || | |||||||||| |||||||||||||    
T  22224188 gaaacaatgcaagttctagaaatgtagttgcacggaacactctatataagtaaattg 22224244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Original strand, 22230530 - 22230586
Alignment:
Q  7 gaaacgatgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||| |||||||||||||||||| |  || | |||||||||| |||||||||||||    
T  22230530 gaaacaatgcaagttctagaaatgtagttgcacggaacactctatataagtaaattg 22230586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 235
Target Start/End: Original strand, 25250480 - 25250516
Alignment:
Q  199 ggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||| |||| |||||||||||||||||||    
T  25250480 ggtaaccttggcacaactggtaaagttgttgtcatgt 25250516  T

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Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 31983240 - 31983184
Alignment:
Q  7 gaaacgatgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||| |||||||||||||||||| |  || | |||||||||| |||||||||||||    
T  31983240 gaaacaatgcaagttctagaaatgtagttgcacggaacactctatataagtaaattg 31983184  T

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Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 45071219 - 45071259
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||||||  || |||||||||||||||||||    
T  45071219 gaggggtaaccttggcgatactggtaaagttgttgtcatgt 45071259  T

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Target: scaffold0043 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 12768 - 12703
Alignment:
Q  110 tgggagttgtgactacctatctttaactgtcgtacacttcgcctttg-aatcacaagtcactcctc 174  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||    
T  12768 tgggagttgtgactacctatttttaactgtcgtacacttcgcctttgaaatcacaagtcactcctc 12703  T

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Target: scaffold0043; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 12859 - 12810
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||||||||||||||| | ||| |||||||||||| |||||||||||||    
T  12859 tgcaagttctagaaatgtaaatgcatggaacactctatataagtaaattg 12810  T

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Target: scaffold0005 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 294481 - 294417
Alignment:
Q  110 tgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    |||||||||||||||||||||||| ||||  ||||||||||||||||||||||||||||||||||    
T  294481 tgggagttgtgactacctatcttttactgctgtacacttcgcctttgaatcacaagtcactcctc 294417  T

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Target: scaffold0005; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 226583 - 226547
Alignment:
Q  199 ggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||| |||||||||||||||||||    
T  226583 ggtaaccttggcgcaactggtaaagttgttgtcatgt 226547  T

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Target: scaffold0036 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 110 - 174
Target Start/End: Original strand, 111909 - 111974
Alignment:
Q  110 tgggagttgtgactacctatctttaactgtcgtacacttcgcctttg-aatcacaagtcactcctc 174  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  111909 tgggagttatgactacctatctttaactgccgtacacttcgcctttgaaatcacaagtcactcctc 111974  T

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Target: scaffold0036; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 111818 - 111867
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    |||||||| |||||||| | ||| |||||||||||| |||||||||||||    
T  111818 tgcaagttatagaaatgtaaatgcatggaacactctatataagtaaattg 111867  T

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Target: scaffold0214 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0214
Description:

Target: scaffold0214; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 80 - 174
Target Start/End: Complemental strand, 21545 - 21453
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatctttaactgtcgtacacttcgcctttg-aatcacaagtcactcctc 174  Q
    ||||| ||||||||||  ||||||||||| ||||||||||||    ||||||||||||| ||||||||||||||||| ||| ||||||||||||||    
T  21545 ttggccatgaaccttactgtgttagatttctgggagttgtgat---ctatctttaactgccgtacacttcgcctttgaaattacaagtcactcctc 21453  T

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Target: scaffold0084 (Bit Score: 46; Significance: 2e-17; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 27498 - 27433
Alignment:
Q  110 tgggagttgtgactacctatctttaactgtcgtacacttcgcctttg-aatcacaagtcactcctc 174  Q
    |||||||||||||| ||||||||||| || ||||||||||||||||| ||||||||||||||||||    
T  27498 tgggagttgtgacttcctatctttaattgccgtacacttcgcctttgaaatcacaagtcactcctc 27433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 27591 - 27545
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaa 60  Q
    |||| |||||||||||| | ||| |||||||||||||||||||||||    
T  27591 tgcatgttctagaaatgtaaatgcatggaacactctttataagtaaa 27545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 46; Significance: 2e-17; HSPs: 4)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 14015 - 13950
Alignment:
Q  110 tgggagttgtgactacctatctttaactgtcgtacacttcgcctttg-aatcacaagtcactcctc 174  Q
    |||||||||||||| ||||||||||| || ||||||||||||||||| ||||||||||||||||||    
T  14015 tgggagttgtgacttcctatctttaattgccgtacacttcgcctttgaaatcacaagtcactcctc 13950  T

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Target: scaffold0048; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 27270 - 27206
Alignment:
Q  110 tgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    ||||||||||||||||||||||||  ||| ||||||||| |||||  ||||||||||||||||||    
T  27270 tgggagttgtgactacctatctttcgctgccgtacactttgccttcaaatcacaagtcactcctc 27206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 60
Target Start/End: Complemental strand, 14108 - 14062
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaa 60  Q
    ||||||||||||||||| | ||| |||||||||||||||||||||||    
T  14108 tgcaagttctagaaatgtaaatgcatggaacactctttataagtaaa 14062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 27363 - 27314
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||||||||||||||  | ||| ||||||||||||||| ||||||||||    
T  27363 tgcaagttctagaaatataaatgcatggaacactctttagaagtaaattg 27314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 197 - 235
Target Start/End: Complemental strand, 13202 - 13164
Alignment:
Q  197 ggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13202 ggggtaaccttggcgcaaccggtaaagttgttgtcatgt 13164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 116 - 174
Target Start/End: Original strand, 97165 - 97222
Alignment:
Q  116 ttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    |||||| |||||||||| | ||| |||||||||||||||||||||||||||||||||||    
T  97165 ttgtgattacctatcttga-ctgccgtacacttcgcctttgaatcacaagtcactcctc 97222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 1488 - 1537
Alignment:
Q  14 tgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||||||||||||||| | ||| ||||||||||||||||||||||||||    
T  1488 tgcaagttctagaaatgtaaatgcatggaacactctttataagtaaattg 1537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 37; Significance: 0.000000000005; HSPs: 4)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 8899 - 8939
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  8899 gaggggtaaccttggcgcaaccggtgaagttgttgtcatgt 8939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 19227 - 19267
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  19227 gaggggtaaccttggcgcaaccggtgaagttgttgtcatgt 19267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 10226 - 10189
Alignment:
Q  198 gggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  10226 gggtaaccttgacgcaactggtaaagttgttgtcatgt 10189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 235
Target Start/End: Complemental strand, 20554 - 20517
Alignment:
Q  198 gggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  20554 gggtaaccttgacgcaactggtaaagttgttgtcatgt 20517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 30533 - 30573
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  30533 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 30573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 27545 - 27489
Alignment:
Q  7 gaaacgatgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||| |||||||||||||||||| | ||| |||||||||||| |||||||||||||    
T  27545 gaaacaatgcaagttctagaaatgtaaatgcatggaacactctatataagtaaattg 27489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 195 - 235
Target Start/End: Complemental strand, 24948 - 24908
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  24948 gaggggtaaccttggcgcaactggtaaagttgttgtcatgt 24908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 110 - 174
Target Start/End: Complemental strand, 61269 - 61206
Alignment:
Q  110 tgggagttgtgactacctatctttaactgtcgtacacttcgcctttgaatcacaagtcactcctc 174  Q
    |||||||||||||||||||||||| |||  |||||||||||||||||||| |||| |||| ||||    
T  61269 tgggagttgtgactacctatcttt-actaccgtacacttcgcctttgaataacaattcacccctc 61206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 130
Target Start/End: Complemental strand, 8783 - 8733
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatc 130  Q
    ||||| ||||||||||  ||||||||||| |||||||||||||||||||||    
T  8783 ttggctatgaaccttacggtgttagatttctgggagttgtgactacctatc 8733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 195 - 235
Target Start/End: Original strand, 83829 - 83869
Alignment:
Q  195 gaggggtaaccttggcgcaaccggtaaagttgttgtcatgt 235  Q
    |||||||||||||||||||||  ||||||||||||||||||    
T  83829 gaggggtaaccttggcgcaactagtaaagttgttgtcatgt 83869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 130
Target Start/End: Complemental strand, 225527 - 225477
Alignment:
Q  80 ttggcaatgaaccttatagtgttagatttatgggagttgtgactacctatc 130  Q
    ||||| ||||||||||   |||||||||| |||||||||||||||||||||    
T  225527 ttggctatgaaccttacgttgttagatttctgggagttgtgactacctatc 225477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 63
Target Start/End: Complemental strand, 225598 - 225542
Alignment:
Q  7 gaaacgatgcaagttctagaaatgcacatgaatggaacactctttataagtaaattg 63  Q
    ||||| |||||||||||||||||| |  || | |||||||||| |||||||||||||    
T  225598 gaaacaatgcaagttctagaaatgtagttgcacggaacactctatataagtaaattg 225542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 235
Target Start/End: Complemental strand, 73034 - 73002
Alignment:
Q  203 accttggcgcaaccggtaaagttgttgtcatgt 235  Q
    ||||||||||||| |||||||||||||||||||    
T  73034 accttggcgcaactggtaaagttgttgtcatgt 73002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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