View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2696_high_86 (Length: 203)
Name: NF2696_high_86
Description: NF2696
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2696_high_86 |
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Alignment Details
Target: chr2 (Bit Score: 166; Significance: 5e-89; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 166; E-Value: 5e-89
Query Start/End: Original strand, 17 - 190
Target Start/End: Original strand, 11107901 - 11108074
Alignment:
| Q |
17 |
aaagagaaacaatgatgcaaagaaactagtaaaataaatttgttttgagttgagagttgtttttcattccattttcacattctaaaacaaatggatcacc |
116 |
Q |
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| T |
11107901 |
aaagagaaacaatgatgcaaagaatctagtaaaataaatttgttttgaggtgagagttgtttttcattccattttcacattctaaaacaaatggatcacc |
11108000 |
T |
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| Q |
117 |
aacctaagttctagctaggttagagtcttaaactctccaagtcacaagttctcaagaaaatggggcattcatct |
190 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
11108001 |
aacctaagttctagctaggttagagtcttaaactctccaagtcacaagttctcaagaaaatggggcattcatct |
11108074 |
T |
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