View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2696_low_17 (Length: 514)

Name: NF2696_low_17
Description: NF2696
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2696_low_17
NF2696_low_17
[»] chr1 (49 HSPs)
chr1 (14-261)||(14146208-14146456)
chr1 (14-261)||(41697094-41697342)
chr1 (56-250)||(6771711-6771905)
chr1 (14-250)||(16139975-16140211)
chr1 (55-250)||(3406338-3406533)
chr1 (55-250)||(3440287-3440482)
chr1 (14-179)||(5316671-5316836)
chr1 (14-179)||(44655732-44655897)
chr1 (15-175)||(23185422-23185582)
chr1 (154-260)||(6888473-6888580)
chr1 (55-176)||(50881424-50881545)
chr1 (57-175)||(1366878-1366996)
chr1 (55-172)||(27559635-27559752)
chr1 (55-175)||(5027544-5027664)
chr1 (56-175)||(4971617-4971736)
chr1 (14-175)||(17168951-17169112)
chr1 (64-175)||(9173030-9173141)
chr1 (64-175)||(9181012-9181123)
chr1 (68-175)||(40501801-40501908)
chr1 (14-175)||(19955712-19955873)
chr1 (14-175)||(13913437-13913600)
chr1 (55-142)||(21740935-21741022)
chr1 (200-261)||(44655542-44655604)
chr1 (55-146)||(6889635-6889726)
chr1 (55-146)||(6891481-6891572)
chr1 (200-250)||(27906949-27906999)
chr1 (64-175)||(51607446-51607558)
chr1 (55-179)||(27906727-27906839)
chr1 (64-122)||(38547043-38547101)
chr1 (68-175)||(44895647-44895748)
chr1 (65-152)||(38853540-38853627)
chr1 (55-158)||(45758506-45758609)
chr1 (199-250)||(10912094-10912145)
chr1 (14-99)||(22865417-22865503)
chr1 (207-250)||(5027982-5028025)
chr1 (199-250)||(23181726-23181777)
chr1 (219-261)||(50880571-50880614)
chr1 (104-179)||(34247039-34247106)
chr1 (64-158)||(43235775-43235871)
chr1 (199-258)||(13913716-13913776)
chr1 (70-152)||(26803966-26804045)
chr1 (64-152)||(33170777-33170865)
chr1 (199-258)||(40502024-40502084)
chr1 (199-250)||(1367111-1367162)
chr1 (55-118)||(17322621-17322684)
chr1 (213-250)||(44895482-44895519)
chr1 (266-302)||(14796313-14796349)
chr1 (266-302)||(14805187-14805223)
chr1 (55-158)||(39134720-39134824)
[»] chr7 (44 HSPs)
chr7 (265-499)||(16814505-16814737)
chr7 (56-261)||(12596286-12596492)
chr7 (55-250)||(10955393-10955588)
chr7 (14-179)||(8171496-8171661)
chr7 (14-179)||(29077200-29077365)
chr7 (55-175)||(18776764-18776884)
chr7 (55-175)||(38414874-38414994)
chr7 (68-175)||(20091292-20091399)
chr7 (68-175)||(48983855-48983962)
chr7 (14-175)||(23551027-23551189)
chr7 (64-175)||(24525692-24525803)
chr7 (55-175)||(19692078-19692198)
chr7 (14-175)||(10329366-10329528)
chr7 (55-137)||(26254015-26254097)
chr7 (55-175)||(47984967-47985088)
chr7 (14-175)||(8239669-8239832)
chr7 (56-136)||(33162338-33162418)
chr7 (199-250)||(28749596-28749647)
chr7 (200-261)||(18777019-18777081)
chr7 (55-158)||(7398452-7398555)
chr7 (55-146)||(23744809-23744900)
chr7 (55-121)||(2611260-2611326)
chr7 (55-152)||(28749717-28749813)
chr7 (64-152)||(23859080-23859168)
chr7 (64-152)||(36902931-36903019)
chr7 (69-152)||(9021812-9021895)
chr7 (55-158)||(27237421-27237524)
chr7 (64-146)||(6765688-6765770)
chr7 (115-175)||(25010417-25010477)
chr7 (199-258)||(20091514-20091573)
chr7 (64-158)||(36891579-36891673)
chr7 (79-145)||(38971267-38971333)
chr7 (64-152)||(20153208-20153296)
chr7 (199-250)||(29076945-29076998)
chr7 (104-179)||(40357413-40357480)
chr7 (65-122)||(21763595-21763652)
chr7 (68-124)||(18201172-18201228)
chr7 (93-152)||(17800257-17800316)
chr7 (199-250)||(47985202-47985253)
chr7 (199-250)||(48984077-48984128)
chr7 (55-140)||(12419493-12419578)
chr7 (213-250)||(19691912-19691949)
chr7 (64-112)||(9014185-9014233)
chr7 (14-46)||(48983795-48983827)
[»] chr6 (34 HSPs)
chr6 (14-261)||(30832482-30832729)
chr6 (56-261)||(24710999-24711205)
chr6 (13-179)||(19737649-19737815)
chr6 (55-179)||(13727398-13727522)
chr6 (55-179)||(21479477-21479601)
chr6 (55-179)||(21280528-21280652)
chr6 (14-175)||(27788647-27788807)
chr6 (55-179)||(33774100-33774224)
chr6 (55-175)||(17353941-17354061)
chr6 (64-175)||(28075770-28075881)
chr6 (55-169)||(20711719-20711833)
chr6 (55-175)||(34397844-34397964)
chr6 (56-152)||(1155849-1155945)
chr6 (14-136)||(27314136-27314259)
chr6 (204-262)||(21280335-21280394)
chr6 (199-250)||(23070889-23070940)
chr6 (200-261)||(13727650-13727712)
chr6 (200-261)||(21479287-21479349)
chr6 (14-175)||(235182-235344)
chr6 (199-258)||(19741223-19741283)
chr6 (199-250)||(12083640-12083691)
chr6 (67-158)||(21183686-21183777)
chr6 (208-261)||(27314773-27314827)
chr6 (64-120)||(6159480-6159536)
chr6 (200-261)||(33773903-33773964)
chr6 (199-250)||(1156017-1156068)
chr6 (64-158)||(2477592-2477686)
chr6 (208-250)||(27579084-27579126)
chr6 (199-250)||(19986981-19987032)
chr6 (64-158)||(20611794-20611888)
chr6 (199-250)||(17353774-17353825)
chr6 (199-250)||(27788922-27788973)
chr6 (64-113)||(30121811-30121860)
chr6 (199-247)||(20711952-20712000)
[»] chr5 (47 HSPs)
chr5 (56-261)||(15480086-15480292)
chr5 (56-261)||(19523096-19523302)
chr5 (14-262)||(36187834-36188083)
chr5 (14-250)||(2274813-2275036)
chr5 (14-179)||(16592029-16592194)
chr5 (55-179)||(34756362-34756486)
chr5 (55-176)||(27078994-27079115)
chr5 (55-175)||(28822338-28822458)
chr5 (55-176)||(30854312-30854433)
chr5 (14-175)||(38869318-38869479)
chr5 (64-175)||(16198799-16198910)
chr5 (64-175)||(9364275-9364386)
chr5 (19-161)||(23284022-23284164)
chr5 (64-175)||(40389541-40389652)
chr5 (64-175)||(16799332-16799443)
chr5 (14-152)||(31194567-31194704)
chr5 (56-137)||(7338021-7338102)
chr5 (14-152)||(22986512-22986651)
chr5 (64-158)||(14318390-14318484)
chr5 (69-175)||(27924066-27924172)
chr5 (55-175)||(7670908-7671029)
chr5 (55-152)||(31881430-31881526)
chr5 (55-152)||(36868872-36868969)
chr5 (199-261)||(31881590-31881653)
chr5 (55-158)||(34425904-34426007)
chr5 (200-250)||(34756615-34756665)
chr5 (55-152)||(10407468-10407565)
chr5 (202-261)||(22987470-22987531)
chr5 (55-152)||(2024638-2024735)
chr5 (199-261)||(16592845-16592908)
chr5 (199-250)||(30853281-30853332)
chr5 (64-116)||(22648741-22648793)
chr5 (55-146)||(1366522-1366613)
chr5 (55-158)||(33037781-33037884)
chr5 (64-158)||(2530902-2530996)
chr5 (64-112)||(24395786-24395834)
chr5 (64-152)||(26718954-26719042)
chr5 (64-152)||(26988698-26988786)
chr5 (199-247)||(31194767-31194815)
chr5 (55-158)||(11242314-11242417)
chr5 (55-104)||(606209-606258)
chr5 (64-113)||(2412134-2412183)
chr5 (199-250)||(16199026-16199077)
chr5 (64-146)||(17344969-17345051)
chr5 (55-152)||(40794323-40794420)
chr5 (199-258)||(27923891-27923951)
chr5 (78-122)||(41911636-41911680)
[»] chr3 (54 HSPs)
chr3 (56-261)||(47467585-47467790)
chr3 (55-250)||(53149313-53149508)
chr3 (55-250)||(21582683-21582878)
chr3 (55-261)||(42098701-42098908)
chr3 (55-179)||(54619202-54619326)
chr3 (14-179)||(3953854-3954019)
chr3 (55-179)||(38681092-38681216)
chr3 (14-175)||(44708464-44708625)
chr3 (14-179)||(18372462-18372631)
chr3 (55-179)||(36716024-36716148)
chr3 (14-180)||(8073296-8073461)
chr3 (14-175)||(43207196-43207356)
chr3 (14-175)||(50939191-50939352)
chr3 (55-179)||(27078568-27078692)
chr3 (55-179)||(27084365-27084489)
chr3 (64-175)||(34290644-34290755)
chr3 (181-261)||(50258716-50258797)
chr3 (64-175)||(37168354-37168465)
chr3 (64-175)||(53506892-53507003)
chr3 (55-163)||(50258622-50258731)
chr3 (14-152)||(36605975-36606113)
chr3 (64-175)||(54407166-54407276)
chr3 (14-175)||(9878645-9878806)
chr3 (200-261)||(36716276-36716338)
chr3 (200-261)||(38681348-38681410)
chr3 (199-261)||(3954852-3954915)
chr3 (200-250)||(27078819-27078869)
chr3 (200-250)||(27084616-27084666)
chr3 (93-179)||(29620425-29620511)
chr3 (200-250)||(54619454-54619504)
chr3 (200-249)||(36605862-36605911)
chr3 (199-246)||(13795206-13795253)
chr3 (64-146)||(25855438-25855519)
chr3 (202-261)||(18372036-18372095)
chr3 (64-122)||(8420366-8420424)
chr3 (55-141)||(26279563-26279649)
chr3 (67-120)||(23641329-23641382)
chr3 (64-140)||(32319163-32319239)
chr3 (64-152)||(49393100-49393187)
chr3 (199-250)||(1148354-1148405)
chr3 (55-124)||(42453442-42453511)
chr3 (218-261)||(29620618-29620662)
chr3 (202-250)||(48156957-48157005)
chr3 (67-122)||(789976-790031)
chr3 (199-250)||(9878919-9878970)
chr3 (199-250)||(34290874-34290925)
chr3 (199-250)||(43207474-43207525)
chr3 (199-250)||(44708297-44708348)
chr3 (199-250)||(53507117-53507168)
chr3 (55-122)||(54574826-54574893)
chr3 (199-245)||(8074087-8074133)
chr3 (64-113)||(28689369-28689418)
chr3 (115-175)||(48157126-48157186)
chr3 (199-247)||(50939468-50939516)
[»] chr4 (73 HSPs)
chr4 (14-250)||(1105446-1105682)
chr4 (56-261)||(37514561-37514767)
chr4 (57-250)||(5128842-5129034)
chr4 (55-261)||(32915300-32915494)
chr4 (55-179)||(10978885-10979009)
chr4 (56-179)||(38209590-38209713)
chr4 (14-179)||(47128972-47129137)
chr4 (14-175)||(34027568-34027729)
chr4 (14-179)||(34768531-34768696)
chr4 (14-171)||(43455488-43455645)
chr4 (55-179)||(48209225-48209349)
chr4 (55-170)||(54780771-54780886)
chr4 (65-179)||(13460192-13460306)
chr4 (55-175)||(32128573-32128693)
chr4 (55-175)||(16845010-16845131)
chr4 (14-175)||(19498493-19498652)
chr4 (14-175)||(54083199-54083360)
chr4 (64-175)||(37777230-37777341)
chr4 (55-167)||(2790739-2790851)
chr4 (56-175)||(35779325-35779443)
chr4 (64-179)||(10428204-10428327)
chr4 (199-270)||(10431442-10431514)
chr4 (14-175)||(35465096-35465256)
chr4 (70-175)||(40089505-40089609)
chr4 (64-152)||(36118465-36118553)
chr4 (64-175)||(16882402-16882513)
chr4 (14-132)||(17679432-17679550)
chr4 (105-179)||(23509846-23509920)
chr4 (200-261)||(55255083-55255145)
chr4 (199-261)||(17679220-17679283)
chr4 (199-261)||(47127984-47128047)
chr4 (14-136)||(51964736-51964861)
chr4 (55-158)||(52468292-52468395)
chr4 (200-249)||(38209842-38209891)
chr4 (199-270)||(45560704-45560776)
chr4 (199-250)||(48208465-48208516)
chr4 (55-122)||(51691913-51691980)
chr4 (55-179)||(55255254-55255366)
chr4 (199-261)||(9579469-9579531)
chr4 (199-261)||(9585164-9585226)
chr4 (55-135)||(39329390-39329470)
chr4 (199-250)||(13459799-13459850)
chr4 (199-262)||(34769533-34769596)
chr4 (55-113)||(16922327-16922385)
chr4 (55-175)||(24969426-24969536)
chr4 (64-152)||(36178684-36178772)
chr4 (55-146)||(10041998-10042089)
chr4 (199-250)||(27596639-27596690)
chr4 (67-113)||(2135331-2135377)
chr4 (76-158)||(4167910-4167992)
chr4 (55-101)||(9578662-9578708)
chr4 (64-158)||(27112036-27112130)
chr4 (59-110)||(23508512-23508564)
chr4 (115-175)||(38352313-38352373)
chr4 (199-250)||(35780556-35780607)
chr4 (69-135)||(40217261-40217327)
chr4 (221-273)||(23510922-23510975)
chr4 (70-158)||(24396940-24397028)
chr4 (55-135)||(39655252-39655332)
chr4 (206-246)||(54779460-54779500)
chr4 (65-112)||(15735142-15735189)
chr4 (199-250)||(16844842-16844893)
chr4 (199-250)||(24969257-24969308)
chr4 (64-146)||(37744916-37744999)
chr4 (199-250)||(37777459-37777510)
chr4 (199-229)||(23510887-23510917)
chr4 (199-249)||(40089340-40089390)
chr4 (213-250)||(32128407-32128444)
chr4 (64-113)||(45656226-45656275)
chr4 (218-261)||(10978147-10978191)
chr4 (199-255)||(38352489-38352545)
chr4 (199-235)||(51964204-51964240)
chr4 (199-258)||(54083478-54083538)
[»] chr2 (47 HSPs)
chr2 (56-250)||(3952914-3953108)
chr2 (55-261)||(7162680-7162887)
chr2 (55-179)||(3155196-3155320)
chr2 (55-179)||(12337447-12337571)
chr2 (55-179)||(4505873-4505997)
chr2 (55-179)||(6964986-6965110)
chr2 (17-175)||(29939823-29939981)
chr2 (56-174)||(10762565-10762683)
chr2 (55-179)||(8907078-8907202)
chr2 (14-175)||(27506698-27506859)
chr2 (17-175)||(9046012-9046171)
chr2 (64-175)||(24410419-24410531)
chr2 (14-142)||(34693991-34694119)
chr2 (14-142)||(34716403-34716531)
chr2 (55-175)||(26716111-26716232)
chr2 (14-132)||(40636164-40636282)
chr2 (199-270)||(12337689-12337761)
chr2 (200-261)||(3155006-3155068)
chr2 (200-261)||(6964795-6964857)
chr2 (14-132)||(5952675-5952791)
chr2 (200-261)||(4505682-4505744)
chr2 (67-141)||(16227379-16227453)
chr2 (200-261)||(34693150-34693212)
chr2 (200-261)||(34715562-34715624)
chr2 (55-158)||(16097008-16097111)
chr2 (55-158)||(21665699-21665802)
chr2 (55-152)||(24035544-24035641)
chr2 (199-250)||(40635977-40636028)
chr2 (64-158)||(38400798-38400892)
chr2 (202-250)||(3399524-3399572)
chr2 (218-261)||(5952949-5952992)
chr2 (199-250)||(41213928-41213979)
chr2 (64-135)||(42029168-42029239)
chr2 (200-260)||(8907330-8907391)
chr2 (55-158)||(7742132-7742236)
chr2 (55-122)||(13800543-13800610)
chr2 (55-122)||(28425709-28425776)
chr2 (64-112)||(11952596-11952643)
chr2 (199-258)||(27506975-27507035)
chr2 (199-250)||(9045847-9045898)
chr2 (199-250)||(24410251-24410302)
chr2 (199-250)||(26715946-26715997)
chr2 (64-106)||(10252468-10252510)
chr2 (200-252)||(21190927-21190979)
chr2 (200-252)||(30175532-30175584)
chr2 (200-252)||(45156348-45156400)
chr2 (55-87)||(1396698-1396730)
[»] chr8 (38 HSPs)
chr8 (55-268)||(37430157-37430371)
chr8 (14-179)||(13534645-13534809)
chr8 (14-179)||(13624185-13624349)
chr8 (14-175)||(45475801-45475962)
chr8 (55-179)||(2952220-2952344)
chr8 (162-261)||(20003839-20003939)
chr8 (55-179)||(30883309-30883433)
chr8 (55-179)||(3048516-3048640)
chr8 (14-175)||(23606587-23606748)
chr8 (56-179)||(5860744-5860867)
chr8 (55-175)||(42600766-42600886)
chr8 (56-175)||(23798261-23798380)
chr8 (14-175)||(10917375-10917536)
chr8 (55-179)||(41879161-41879285)
chr8 (55-146)||(5973106-5973197)
chr8 (200-261)||(2952473-2952535)
chr8 (200-261)||(5860996-5861058)
chr8 (200-250)||(3048774-3048824)
chr8 (200-261)||(30883113-30883175)
chr8 (55-152)||(11290191-11290288)
chr8 (55-152)||(34789861-34789958)
chr8 (55-158)||(7944521-7944624)
chr8 (64-158)||(8102913-8103007)
chr8 (78-158)||(5942697-5942777)
chr8 (55-158)||(41677172-41677276)
chr8 (199-250)||(41878180-41878231)
chr8 (199-250)||(45472206-45472257)
chr8 (55-113)||(8646251-8646309)
chr8 (64-158)||(39332413-39332507)
chr8 (55-158)||(15167414-15167517)
chr8 (64-135)||(23941099-23941170)
chr8 (64-113)||(30674411-30674460)
chr8 (199-258)||(42600590-42600650)
chr8 (64-152)||(34048713-34048803)
chr8 (64-146)||(5721572-5721654)
chr8 (64-102)||(34868185-34868223)
chr8 (64-101)||(9108551-9108588)
chr8 (213-250)||(10917209-10917246)
[»] scaffold0070 (2 HSPs)
scaffold0070 (14-179)||(1323-1488)
scaffold0070 (199-266)||(1009-1077)
[»] scaffold0001 (3 HSPs)
scaffold0001 (109-227)||(181851-181969)
scaffold0001 (14-115)||(183104-183205)
scaffold0001 (220-261)||(181438-181480)
[»] scaffold0039 (2 HSPs)
scaffold0039 (14-175)||(106522-106684)
scaffold0039 (199-248)||(106396-106445)
[»] scaffold1590 (1 HSPs)
scaffold1590 (55-158)||(257-360)
[»] scaffold0012 (1 HSPs)
scaffold0012 (64-158)||(206497-206591)
[»] scaffold0182 (1 HSPs)
scaffold0182 (67-150)||(24004-24087)
[»] scaffold0097 (1 HSPs)
scaffold0097 (64-146)||(38938-39020)
[»] scaffold0018 (1 HSPs)
scaffold0018 (64-146)||(173518-173600)
[»] scaffold0003 (1 HSPs)
scaffold0003 (82-135)||(351360-351413)
[»] scaffold0022 (2 HSPs)
scaffold0022 (55-122)||(40122-40191)
scaffold0022 (55-122)||(138182-138251)
[»] scaffold0007 (1 HSPs)
scaffold0007 (55-157)||(230858-230960)
[»] scaffold0227 (1 HSPs)
scaffold0227 (64-101)||(16123-16160)


Alignment Details
Target: chr1 (Bit Score: 181; Significance: 1e-97; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 14 - 261
Target Start/End: Complemental strand, 14146456 - 14146208
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    |||||||||||||| ||||||||||||| ||||        ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  14146456 atgaaaagaggccagtgataaaatcaaaacgtattttttttaaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatg 14146357  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatcctt 213  Q
     |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14146356 cggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaattaatcatgaggaacccccactcttgaggcccatcctt 14146257  T
Q  214 gagggaggcccagctcgtttgagctgtttgcaccccc-cagggacgccc 261  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  14146256 gagggaggcccagctcgtttgagctgtttgcaccccctcagggacgccc 14146208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 14 - 261
Target Start/End: Original strand, 41697094 - 41697342
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    ||||||||||| || ||||||||||||| ||||        ||||||||||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  41697094 atgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagcgatgttctatttatattttttaaaagataaatacaaagtatcgtatatatg 41697193  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatcctt 213  Q
      ||||| | |||  |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  41697194 cagtacatccagaagtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaatcatgaggaacccccactcttgatgcccatcctt 41697293  T
Q  214 gagggaggcccagctcgtttgagctgtttgcaccccc-cagggacgccc 261  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||    
T  41697294 gagggaggcccagctcgtttgagctgtttgcaccccctcagggacgccc 41697342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 155; E-Value: 5e-82
Query Start/End: Original strand, 56 - 250
Target Start/End: Complemental strand, 6771905 - 6771711
Alignment:
Q  56 aaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatga 155  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| |||| |||||||||||||||||| || || ||    
T  6771905 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacacgagga 6771806  T
Q  156 acccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  6771805 acctccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttaagggaggcccagctcgtttgagctgtttgcaccccc 6771711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 16140211 - 16139975
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    |||||||||||||  ||||||||||||| ||||        ||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  16140211 atgaaaagaggccggtgataaaatcaaaacgtattttttttaaaagagtgatgttctatttatattttttaaaagataaatacaaggtgttgtatatatg 16140112  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatcctt 213  Q
     ||||||||||||| |||||||||||||||||| ||||| ||| ||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||    
T  16140111 cggtacacctagaggtgaaaatgactaccgtatacatgaggaatccccacctaacactaaaatcaatcatgaggaacccccacgcttgagacccatcctt 16140012  T
Q  214 gagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||| ||||||||||||||||||||||||    
T  16140011 gagggaggcccaactcgtttgagctgtttgcaccccc 16139975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 55 - 250
Target Start/End: Complemental strand, 3406533 - 3406338
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||  ||||||   ||| |||||||||||||||||| ||||| |    
T  3406533 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgagg 3406434  T
Q  155 aacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3406433 aacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgggggaggcccagctcgtttgagctgtttgcaccccc 3406338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 55 - 250
Target Start/End: Original strand, 3440287 - 3440482
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||  ||||||   ||| |||||||||||||||||| ||||| |    
T  3440287 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcagtacactcggaggtgaaaatgactaccgtatacatgagg 3440386  T
Q  155 aacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  3440387 aacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgggggaggcccagctcgtttgagctgtttgcaccccc 3440482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 14 - 179
Target Start/End: Complemental strand, 5316836 - 5316671
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    ||||||||||| || ||||||||||||| ||||        |||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  5316836 atgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatg 5316737  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaatcaa 179  Q
     |||||||| |||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  5316736 cggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaa 5316671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 14 - 179
Target Start/End: Complemental strand, 44655897 - 44655732
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    |||||||||| ||| ||||||||||||| | ||        |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  44655897 atgaaaagagaccagtgataaaatcaaaacataatttttttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatg 44655798  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaatcaa 179  Q
     |||||||| |||| | |||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  44655797 cggtacacccagaggtaaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaa 44655732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 15 - 175
Target Start/End: Complemental strand, 23185582 - 23185422
Alignment:
Q  15 tgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgt 114  Q
    ||||||||||||| ||||||||||||| ||||        |||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||     
T  23185582 tgaaaagaggccagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgc 23185483  T
Q  115 ggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaa 175  Q
    |||||||| | || |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  23185482 ggtacacccataggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 23185422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 154 - 260
Target Start/End: Complemental strand, 6888580 - 6888473
Alignment:
Q  154 gaacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-ca 252  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||    
T  6888580 gaacccccgcttaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccaactcgtttgagctgtttgcaccccctca 6888481  T
Q  253 gggacgcc 260  Q
    ||||||||    
T  6888480 gggacgcc 6888473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 55 - 176
Target Start/End: Complemental strand, 50881545 - 50881424
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||| ||||||||||||| |||| ||||| |    
T  50881545 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacatctagaggtgaaaatgactacagtatacatgagg 50881446  T
Q  155 aacccccacctaacaccaaaat 176  Q
    |||| |||||||||||||||||    
T  50881445 aacctccacctaacaccaaaat 50881424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 57 - 175
Target Start/End: Original strand, 1366878 - 1366996
Alignment:
Q  57 aagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaa 156  Q
    |||||| |||||||||||||||||||||||||||| ||| |||||| |||||||||| |||||||| | ||||||||||||||||||||| || || |||    
T  1366878 aagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaagatgaaaatgactaccgtatacacgaggaa 1366977  T
Q  157 cccccacctaacaccaaaa 175  Q
    |||||||||||||||||||    
T  1366978 cccccacctaacaccaaaa 1366996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 55 - 172
Target Start/End: Complemental strand, 27559752 - 27559635
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||| ||| |||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||| | || |||||||||||||||||| ||||| |    
T  27559752 aaaaaagcaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 27559653  T
Q  155 aacccccacctaacacca 172  Q
    ||||||||||||||||||    
T  27559652 aacccccacctaacacca 27559635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 55 - 175
Target Start/End: Complemental strand, 5027664 - 5027544
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| | || |||||||||||||| |||  |||| |    
T  5027664 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccataggtgaaaatgactaccatatagatgagg 5027565  T
Q  155 aacccccacctaacaccaaaa 175  Q
    |||||||||||||||||||||    
T  5027564 aacccccacctaacaccaaaa 5027544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 4971617 - 4971736
Alignment:
Q  56 aaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatga 155  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||  |||||||||| |||||||| | |  |||||||||||||||||| ||||| ||    
T  4971617 aaagagcaatgttctatttatattttttaaaagataaatacaaggtaccgtatatatgcggtacacccataagtgaaaatgactaccgtatacatgagga 4971716  T
Q  156 acccccacctaacaccaaaa 175  Q
    ||||||||||||||||||||    
T  4971717 acccccacctaacaccaaaa 4971736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 14 - 175
Target Start/End: Complemental strand, 17169112 - 17168951
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    ||||||||||| || ||||||||||||| ||||        |||| ||| |||||||||||||||||||||||||||| ||| ||||||| |||||||||    
T  17169112 atgaaaagaggtcagtgataaaatcaaaacgtatttttttaaaaaaagcaatgttctatttatattttttaaaagataaatataaggtgttgtatatatg 17169013  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaa 175  Q
     |||||||| | || |||||||||||||| ||| ||||| ||||||| ||||||||||||||    
T  17169012 cggtacacccaaaggtgaaaatgactaccatatacatgaggaacccctacctaacaccaaaa 17168951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 64 - 175
Target Start/End: Original strand, 9173030 - 9173141
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccac 163  Q
    |||||||||||||||||||||||||||| ||| |||||| |||||||||| |||||| | | || |||||||||||||||||| ||||| ||||||||||    
T  9173030 atgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccac 9173129  T
Q  164 ctaacaccaaaa 175  Q
    ||||||||||||    
T  9173130 ctaacaccaaaa 9173141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 64 - 175
Target Start/End: Original strand, 9181012 - 9181123
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccac 163  Q
    |||||||||||||||||||||||||||| ||| |||||| |||||||||| |||||| | | || |||||||||||||||||| ||||| ||||||||||    
T  9181012 atgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccac 9181111  T
Q  164 ctaacaccaaaa 175  Q
    ||||||||||||    
T  9181112 ctaacaccaaaa 9181123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 40501801 - 40501908
Alignment:
Q  68 tctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaa 167  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| |||||||| | || | |||||||||||||||| ||||| ||||| ||||||||    
T  40501801 tctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtaaaaatgactaccgtatacatgaagaacctccacctaa 40501900  T
Q  168 caccaaaa 175  Q
    ||||||||    
T  40501901 caccaaaa 40501908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 14 - 175
Target Start/End: Complemental strand, 19955873 - 19955712
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    |||||||||||||| ||||||||||||| || |         ||| ||| ||| |||||||||||||||||||||||| ||| |||||  ||||||||||    
T  19955873 atgaaaagaggccagtgataaaatcaaaacgaatttttttttaaaaagcaatgatctatttatattttttaaaagataaatataaggtaccgtatatatg 19955774  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaa 175  Q
     |||||||| | || ||||||||||||||||||  |||| ||||||||||||||||||||||    
T  19955773 cggtacacccaaaggtgaaaatgactaccgtatatatgaggaacccccacctaacaccaaaa 19955712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 175
Target Start/End: Original strand, 13913437 - 13913600
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcg--tatata 111  Q
    ||||||||| |||| |||||||||||||  |||        |||| ||| ||| |||||||||||||||||||||||| ||| ||| || ||  ||||||    
T  13913437 atgaaaagatgccagtgataaaatcaaaatgtattttttttaaaaaagcaatgatctatttatattttttaaaagataaatataagttgccgggtatata 13913536  T
Q  112 tgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaa 175  Q
    || |||||||||| |  |||||||||||||||||| |||||  |||||||||||||||||||||    
T  13913537 tgcggtacacctaaaagtgaaaatgactaccgtatacatgagaaacccccacctaacaccaaaa 13913600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 55 - 142
Target Start/End: Original strand, 21740935 - 21741022
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactacc 142  Q
    |||||||| ||||||||||| |||||||||||||||| |||||||||| |||||||||| | |||||| |||| ||||||||||||||    
T  21740935 aaaagagcaatgttctatttgtattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactacc 21741022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 200 - 261
Target Start/End: Complemental strand, 44655604 - 44655542
Alignment:
Q  200 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagggacgccc 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  44655604 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcagggacgccc 44655542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 55 - 146
Target Start/End: Complemental strand, 6889726 - 6889635
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtat 146  Q
    |||||||| |||||||||||||||||||||||||||| |||||| || ||||||||||| |||||| | |||| ||||||||| | ||||||    
T  6889726 aaaagagcaatgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtacatccagaggtgaaaatgattgccgtat 6889635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 55 - 146
Target Start/End: Complemental strand, 6891572 - 6891481
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtat 146  Q
    |||||||| |||||||||||||||||||||||||||| |||||| || ||||||||||| |||||| | |||| ||||||||| | ||||||    
T  6891572 aaaagagcaatgttctatttatattttttaaaagataaatacaaagtatcgtatatatgcggtacatccagaggtgaaaatgattgccgtat 6891481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 200 - 250
Target Start/End: Original strand, 27906949 - 27906999
Alignment:
Q  200 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27906949 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 27906999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 64 - 175
Target Start/End: Original strand, 51607446 - 51607558
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtc-gtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaaccccca 162  Q
    ||||| |||||||||||||||||||||| ||| |||||| | ||||||||| |||||||| | |  |||||||||||||||||| ||||| |||| ||||    
T  51607446 atgttttatttatattttttaaaagataaatataaggtggccgtatatatgcggtacacccaaacgtgaaaatgactaccgtatacatgaggaactccca 51607545  T
Q  163 cctaacaccaaaa 175  Q
     |||| |||||||    
T  51607546 tctaataccaaaa 51607558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 55 - 179
Target Start/End: Original strand, 27906727 - 27906839
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||||| |||||| ||||||||||||||||||||| |||||||||| ||             |||| |||| |||||||||||||||||| ||||| |    
T  27906727 aaaagagcaatgttccatttatattttttaaaagataaatacaaggtgccgc------------cacccagaggtgaaaatgactaccgtatacatgagg 27906814  T
Q  155 aacccccacctaacaccaaaatcaa 179  Q
    |||||||||||||||||||||||||    
T  27906815 aacccccacctaacaccaaaatcaa 27906839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 38547043 - 38547101
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacc 122  Q
    |||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||    
T  38547043 atgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgtggtacacc 38547101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 68 - 175
Target Start/End: Complemental strand, 44895748 - 44895647
Alignment:
Q  68 tctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaa 167  Q
    |||||||||||||||||||||||| ||| |||||| ||       |||||||||| | || ||||||||| |||||||| ||||| ||||||||||||||    
T  44895748 tctatttatattttttaaaagataaatataaggtggcgg------gtggtacacccaaaggtgaaaatgattaccgtatacatgaggaacccccacctaa 44895655  T
Q  168 caccaaaa 175  Q
    ||||||||    
T  44895654 caccaaaa 44895647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 65 - 152
Target Start/End: Complemental strand, 38853627 - 38853540
Alignment:
Q  65 tgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatga 152  Q
    ||||||||||| |||||||||| |||| |||||||||||||||||||||| ||| | | | || ||||||| |||||||||| |||||    
T  38853627 tgttctatttaaattttttaaatgataaatacaaggtgtcgtatatatgttgtatatccaaaggtgaaaatcactaccgtatacatga 38853540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 55 - 158
Target Start/End: Complemental strand, 45758609 - 45758506
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||| | |||||||||||| ||||||||||||||| || |||||||| ||||||||||  |||| | | || ||||||| |||||||||| ||||| |    
T  45758609 aaaagaacaatgttctatttaaattttttaaaagataaatgcaaggtgttgtatatatgttatacatccaaaggtgaaaatcactaccgtatacatgagg 45758510  T
Q  155 aacc 158  Q
    ||||    
T  45758509 aacc 45758506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 10912094 - 10912145
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    ||||||||||||||||  ||||||||||||||||||||||||| ||||||||    
T  10912094 ttgaggcccatccttggaggaggcccagctcgtttgagctgttcgcaccccc 10912145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 14 - 99
Target Start/End: Original strand, 22865417 - 22865503
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnn-aaaagagcgatgttctatttatattttttaaaagatatatacaag 99  Q
    ||||||||||| |||||||||||||||| ||||         |||||||| |||||||||||||||||||||||||||| |||||||    
T  22865417 atgaaaagaggtcaatgataaaatcaaaacgtattttttttcaaaagagcaatgttctatttatattttttaaaagataaatacaag 22865503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 207 - 250
Target Start/End: Original strand, 5027982 - 5028025
Alignment:
Q  207 catccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||| ||||||||||||||| |||||||||||||||||||    
T  5027982 catccttgggggaggcccagctcggttgagctgtttgcaccccc 5028025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 23181777 - 23181726
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||| ||| ||| ||||||||||| |||||||||||||||||||    
T  23181777 ttgaggcccatcattgggggtggcccagctcggttgagctgtttgcaccccc 23181726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 219 - 261
Target Start/End: Complemental strand, 50880614 - 50880571
Alignment:
Q  219 aggcccagctcgtttgagctgtttgcaccccc-cagggacgccc 261  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  50880614 aggcccagctcgtttgagctgtttgcaccccctcagggacgccc 50880571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 179
Target Start/End: Complemental strand, 34247106 - 34247039
Alignment:
Q  104 cgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaatcaa 179  Q
    |||||||||| |||||||| |||||||||||||||||||||         ||||||||||||||||||||||||||    
T  34247106 cgtatatatgcggtacaccaagagatgaaaatgactaccgt--------ggaacccccacctaacaccaaaatcaa 34247039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 64 - 158
Target Start/End: Original strand, 43235775 - 43235871
Alignment:
Q  64 atgttctatttatatttttta--aaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacc 158  Q
    |||||||||||| |||||||   ||||||| ||||||| |||||||||||||  ||||||| | || ||||||| |||| ||||| ||||| |||||    
T  43235775 atgttctatttaaatttttttttaaagataaatacaagatgtcgtatatatgatgtacacccaaaggtgaaaatcactatcgtatacatgaggaacc 43235871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 258
Target Start/End: Original strand, 13913716 - 13913776
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagggacg 258  Q
    |||||||||||   |||||||||||||||||  ||||||||||||||||||| ||||||||    
T  13913716 ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcagggacg 13913776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 70 - 152
Target Start/End: Complemental strand, 26804045 - 26803966
Alignment:
Q  70 tatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatga 152  Q
    |||||| ||||||||||||||| ||||||| ||||||||||||| | |||||    || ||||||| |||||||||| |||||    
T  26804045 tatttaaattttttaaaagataaatacaagatgtcgtatatatgcgatacac---aaggtgaaaatcactaccgtatacatga 26803966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 152
Target Start/End: Complemental strand, 33170865 - 33170777
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatga 152  Q
    ||||| |||||| |||||||||||  || |||||| |||| ||||||||| |||||||| |  | ||||||| |||||||||| |||||    
T  33170865 atgttatatttaaattttttaaaacgtaaatacaatgtgttgtatatatgcggtacaccaaatggtgaaaatcactaccgtatacatga 33170777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 258
Target Start/End: Original strand, 40502024 - 40502084
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagggacg 258  Q
    |||||||||||   |||||||||||||||||  ||||||||||||||||||| ||||||||    
T  40502024 ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcagggacg 40502084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 1367111 - 1367162
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||   |||||||||||||||||  |||||||||||||||||||    
T  1367111 ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccc 1367162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 118
Target Start/End: Original strand, 17322621 - 17322684
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggta 118  Q
    |||||| | |||||||||||||||||||| ||||||| |||||| ||  |||||||||| ||||    
T  17322621 aaaagaacaatgttctatttatatttttttaaagataaatacaatgtagcgtatatatgcggta 17322684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 250
Target Start/End: Complemental strand, 44895519 - 44895482
Alignment:
Q  213 tgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||||||||  |||||||||||||||||||    
T  44895519 tgagggaggcccagctctgttgagctgtttgcaccccc 44895482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 266 - 302
Target Start/End: Original strand, 14796313 - 14796349
Alignment:
Q  266 atataataatatacgttcttgccaactgagctatgtt 302  Q
    ||||||||||||| || ||||||||||||||||||||    
T  14796313 atataataatatatgtccttgccaactgagctatgtt 14796349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 266 - 302
Target Start/End: Original strand, 14805187 - 14805223
Alignment:
Q  266 atataataatatacgttcttgccaactgagctatgtt 302  Q
    ||||||||||||| || ||||||||||||||||||||    
T  14805187 atataataatatatgtccttgccaactgagctatgtt 14805223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 158
Target Start/End: Original strand, 39134720 - 39134824
Alignment:
Q  55 aaaagagcgatgttctatttatatttttt-aaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgat 153  Q
    |||||| | |||||||||||| ||||||| |||||||| ||||||||||  |||||||||   |||||| | || ||| ||| ||||| |||| |||||     
T  39134720 aaaagaacaatgttctatttaaattttttaaaaagataaatacaaggtgctgtatatatgcaatacacccaaaggtgataatcactactgtatacatgag 39134819  T
Q  154 gaacc 158  Q
    |||||    
T  39134820 gaacc 39134824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 175; Significance: 5e-94; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 265 - 499
Target Start/End: Complemental strand, 16814737 - 16814505
Alignment:
Q  265 catataataatatacgttcttgccaactgagctatgttcacagggacatttccatcttaattttattattatgaaatttgtcaaagataaatatgcatgc 364  Q
    |||||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  16814737 catataataatgcatgttcttgccaactgagctatgttcacagggacatttccatcttaattttattattatgaaatttgtcaaagataaatatgcttgc 16814638  T
Q  365 aatgaaaatattaattgagtctaatgaaaatttatttttcttgataaacctcagctacctaagtgggaagaatcagttttgcaagctagggcaagatatc 464  Q
    ||| ||| ||||| | | | |||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16814637 aattaaa-tattattggtg-ctaatgaaaactaattttgcttgataaacctcagctacctaagtgggaagaatcagttttgcaagctagggcaagatatc 16814540  T
Q  465 aacaaacaattaacaaccttgcagataaatatcct 499  Q
    |||||||||||||||||||||||||||||||||||    
T  16814539 aacaaacaattaacaaccttgcagataaatatcct 16814505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 56 - 261
Target Start/End: Original strand, 12596286 - 12596492
Alignment:
Q  56 aaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatga 155  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||||| ||    
T  12596286 aaagagcgatgttctatttatatttttttaaagataaatacaaggtgccgtatatatgtggtacacccagaggtgaaaatgactaccgtatgcatgagga 12596385  T
Q  156 acccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagg 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12596386 acccccacctaacaccaaaatcaatcatgaggaacccccactcttgagggccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcagg 12596485  T
Q  255 gacgccc 261  Q
    |||||||    
T  12596486 gacgccc 12596492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 55 - 250
Target Start/End: Complemental strand, 10955588 - 10955393
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||| |||||||||| |||||||  |||| |||||||||||||||||| ||||| |    
T  10955588 aaaagagcgatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatgagg 10955489  T
Q  155 aacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  10955488 aacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccaactcgtttgagctatttgcaccccc 10955393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 8171496 - 8171661
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    ||||||||||| || ||||||||||||| ||||        |||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  8171496 atgaaaagaggtcagtgataaaatcaaagcgtattttttttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatg 8171595  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaatcaa 179  Q
     |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  8171596 cggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaa 8171661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 14 - 179
Target Start/End: Complemental strand, 29077365 - 29077200
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    ||||||||||| || ||||||||||||| ||||        |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  29077365 atgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatg 29077266  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaatcaa 179  Q
     |||||||| |||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  29077265 cggtacaccaagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaa 29077200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 55 - 175
Target Start/End: Original strand, 18776764 - 18776884
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| |||  |||||||||||||||||| |||||      
T  18776764 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaaaatgactaccgtatacatgaga 18776863  T
Q  155 aacccccacctaacaccaaaa 175  Q
    |||||||||||||||||||||    
T  18776864 aacccccacctaacaccaaaa 18776884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 55 - 175
Target Start/End: Original strand, 38414874 - 38414994
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||||| | ||||||||| |||||||||||||||| ||| |||||| ||||||||||||||||||| | || ||||||||||||| |||| ||||| |    
T  38414874 aaaagagcaacgttctatttgtattttttaaaagataaatataaggtgacgtatatatgtggtacacccaaaggtgaaaatgactactgtatacatgagg 38414973  T
Q  155 aacccccacctaacaccaaaa 175  Q
    |||||||||||||||||||||    
T  38414974 aacccccacctaacaccaaaa 38414994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 20091292 - 20091399
Alignment:
Q  68 tctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaa 167  Q
    |||||||||||||||||||||||| ||| |||||| |||||||||| |||||||| | || |||||||||||||||||| ||||| ||||||||||||||    
T  20091292 tctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaa 20091391  T
Q  168 caccaaaa 175  Q
    ||||||||    
T  20091392 caccaaaa 20091399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 68 - 175
Target Start/End: Original strand, 48983855 - 48983962
Alignment:
Q  68 tctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaa 167  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| |||||||| | || ||||||| |||||||||| ||||| ||||||||||||||    
T  48983855 tctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaataactaccgtatacatgaggaacccccacctaa 48983954  T
Q  168 caccaaaa 175  Q
    ||||||||    
T  48983955 caccaaaa 48983962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 14 - 175
Target Start/End: Original strand, 23551027 - 23551189
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatatttt-ttaaaagatatatacaaggtgtcgtatatat 112  Q
    |||||||||||||| ||||||||||||| | ||        |||| ||| ||| |||||||||||||| |||||||||| ||| ||||||||||||||||    
T  23551027 atgaaaagaggccagtgataaaatcaaaacatatttttttaaaaaaagcaatgatctatttatatttttttaaaagataaatataaggtgtcgtatatat 23551126  T
Q  113 gtggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaa 175  Q
    | |||||| | | || |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  23551127 gcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 23551189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 64 - 175
Target Start/End: Original strand, 24525692 - 24525803
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccac 163  Q
    |||||||||||||||||||||||||||| ||| |||||| ||| |||||| |||||||| | |  |||||||||||||||||| ||||| ||||||||||    
T  24525692 atgttctatttatattttttaaaagataaatataaggtgccgtgtatatgcggtacacccaaaagtgaaaatgactaccgtatacatgaggaacccccac 24525791  T
Q  164 ctaacaccaaaa 175  Q
    ||||||||||||    
T  24525792 ctaacaccaaaa 24525803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 55 - 175
Target Start/End: Complemental strand, 19692198 - 19692078
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||||| |||||||||||||||||||||||||||| ||| |||||| | |||||||| |||||||||| || |||||||||||  ||||| ||||| |    
T  19692198 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccatatatatgcggtacacctaaaggtgaaaatgactttcgtatacatgagg 19692099  T
Q  155 aacccccacctaacaccaaaa 175  Q
    ||||| | |||||||||||||    
T  19692098 aaccctcgcctaacaccaaaa 19692078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 14 - 175
Target Start/End: Original strand, 10329366 - 10329528
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaaga-gcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatat 112  Q
    |||||||||||||| ||||||||||||| ||||        |||| | || |||||||||||||||||||||||||||| ||| |||||| |||||||||    
T  10329366 atgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaaaagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatat 10329465  T
Q  113 gtggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaa 175  Q
    | || | ||| | || |||||||||||||||||| |||||  ||||||||| |||||||||||    
T  10329466 gaggaaaacccaaaggtgaaaatgactaccgtatacatgagaaacccccacttaacaccaaaa 10329528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 55 - 137
Target Start/End: Complemental strand, 26254097 - 26254015
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatga 137  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| | ||||||||||||    
T  26254097 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaagatgaaaatga 26254015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 55 - 175
Target Start/End: Original strand, 47984967 - 47985088
Alignment:
Q  55 aaaagagcgatgttctatttatatttt-ttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgat 153  Q
    |||| ||| |||||||||||||||||| |||||||| | ||| |||||| |||||||||| |||||||| | || |||||||||| ||||||| |||||     
T  47984967 aaaaaagcaatgttctatttatatttttttaaaagaaaaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgaccaccgtatacatgag 47985066  T
Q  154 gaacccccacctaacaccaaaa 175  Q
    ||||||||||||||||| ||||    
T  47985067 gaacccccacctaacacaaaaa 47985088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 14 - 175
Target Start/End: Complemental strand, 8239832 - 8239669
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    |||||||||||||||||||||||| ||| ||||        |||||||  |||||||||||||||||||||||| ||| ||| || ||| ||||||||||    
T  8239832 atgaaaagaggccaatgataaaatgaaaacgtattttttttaaaagagtaatgttctatttatattttttaaaaaataaatataatgtgccgtatatatg 8239733  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatgatgaaccc--ccacctaacaccaaaa 175  Q
    ||||||||| | |  ||||||||| ||||||||  |||| ||||||  |||| |||||||||||    
T  8239732 tggtacacccaaatgtgaaaatgattaccgtatatatgaggaacccctccacttaacaccaaaa 8239669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 56 - 136
Target Start/End: Original strand, 33162338 - 33162418
Alignment:
Q  56 aaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatg 136  Q
    ||||||| ||| |||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| || ||||||||    
T  33162338 aaagagcaatgctctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaatg 33162418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 28749647 - 28749596
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28749647 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 28749596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 200 - 261
Target Start/End: Original strand, 18777019 - 18777081
Alignment:
Q  200 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacc-ccccagggacgccc 261  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  18777019 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacctcctcagggacgccc 18777081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 55 - 158
Target Start/End: Complemental strand, 7398555 - 7398452
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||| | |||||||||||| ||||||| ||||||| |||||||||| | |||||||||| |||||||| || ||||||| |||||| ||| ||||| |    
T  7398555 aaaagaacaatgttctatttaaattttttgaaagataaatacaaggtgccatatatatgtgatacacctaaaggtgaaaatcactaccatatacatgagg 7398456  T
Q  155 aacc 158  Q
    ||||    
T  7398455 aacc 7398452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 55 - 146
Target Start/End: Complemental strand, 23744900 - 23744809
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtat 146  Q
    |||||| | |||||||| ||| ||||||||||||||| |||||||||| || ||||||| |||||||||| |||| ||||| ||||||||||    
T  23744900 aaaagaacaatgttctaattaaattttttaaaagataaatacaaggtgccgcatatatgcggtacacctaaagataaaaatcactaccgtat 23744809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 55 - 121
Target Start/End: Original strand, 2611260 - 2611326
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacac 121  Q
    |||||| | |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||    
T  2611260 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacac 2611326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 55 - 152
Target Start/End: Complemental strand, 28749813 - 28749717
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatga 152  Q
    |||||||| || |||||||||||||||| |||||||| |||||||||| |||||||||| |||||||  |||  ||||||| |||||||||| |||||    
T  28749813 aaaagagcaatattctatttatatttttgaaaagataaatacaaggtgccgtatatatgcggtacactcagatgtgaaaat-actaccgtatacatga 28749717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 64 - 152
Target Start/End: Complemental strand, 23859168 - 23859080
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatga 152  Q
    |||||||||||| ||||||||||||||| |||||| ||  |||||||||| | |||||| | |||||||||| |||||||||| |||||    
T  23859168 atgttctatttaaattttttaaaagataaatacaatgtaccgtatatatgcgatacacccaaagatgaaaattactaccgtatacatga 23859080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 64 - 152
Target Start/End: Original strand, 36902931 - 36903019
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatga 152  Q
    |||||||||||| ||||||||| ||||| ||||||| |||||||||||||| ||||||||| || ||||||| | ||| |||| |||||    
T  36902931 atgttctatttaaattttttaatagataaatacaagatgtcgtatatatgttgtacacctaaaggtgaaaatcagtactgtatacatga 36903019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 9021812 - 9021895
Alignment:
Q  69 ctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatga 152  Q
    ||||||| ||||||||||||||| |||||| ||| |||||||||| |||||||| | || ||||||| |||||||||| |||||    
T  9021812 ctatttaaattttttaaaagataaatacaatgtgccgtatatatgcggtacacccaaaggtgaaaatcactaccgtatacatga 9021895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 55 - 158
Target Start/End: Original strand, 27237421 - 27237524
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||| | |||||||||||| ||||||||||||||| ||||||||||| ||||||||||| |  | ||| || ||||||| |||| ||||| ||||| |    
T  27237421 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgttgtatatatgtgatgaatctaaaggtgaaaatcactatcgtatacatgagg 27237520  T
Q  155 aacc 158  Q
    ||||    
T  27237521 aacc 27237524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 64 - 146
Target Start/End: Original strand, 6765688 - 6765770
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtat 146  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||| |  ||||| | | || ||||||| ||||||||||    
T  6765688 atgttctatttaaattttttaaaagataaatacaaggtgtcgtatataagccgtacatccaaaggtgaaaatcactaccgtat 6765770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 115 - 175
Target Start/End: Complemental strand, 25010477 - 25010417
Alignment:
Q  115 ggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaa 175  Q
    |||||||| | || |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  25010477 ggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 25010417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 258
Target Start/End: Original strand, 20091514 - 20091573
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccccagggacg 258  Q
    |||||||||||   |||||||||||||||||  |||||||||||||||||||||||||||    
T  20091514 ttgaggcccatgactgagggaggcccagctctattgagctgtttgcaccccccagggacg 20091573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 64 - 158
Target Start/End: Complemental strand, 36891673 - 36891579
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacc 158  Q
    ||||||||||||||||||||||| |||  |||||| |||| ||||||||  |||||| | | || ||||||| |||||||||| ||||| |||||    
T  36891673 atgttctatttatattttttaaatgatgaatacaatgtgttgtatatattcggtacatccaaaggtgaaaatcactaccgtatacatgaggaacc 36891579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 79 - 145
Target Start/End: Complemental strand, 38971333 - 38971267
Alignment:
Q  79 tttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgta 145  Q
    ||||||||||||| ||||||||||||||||||||||  |||||||| |  ||||||| |||||||||    
T  38971333 tttttaaaagataaatacaaggtgtcgtatatatgttatacacctaaatgtgaaaatcactaccgta 38971267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 152
Target Start/End: Complemental strand, 20153296 - 20153208
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatga 152  Q
    ||||| |||||| ||||||||||||||| |||||| |||| ||||||||| | || ||| | |||||||||| ||| |||||| |||||    
T  20153296 atgttttatttaaattttttaaaagataaatacaaagtgttgtatatatgcgataaacccaaagatgaaaatcactgccgtatacatga 20153208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 29076998 - 29076945
Alignment:
Q  199 ttgaggcccatccttgaggg--aggcccagctcgtttgagctgtttgcaccccc 250  Q
    ||||||||||||||||||||  |||||| |||||||| ||||||||||||||||    
T  29076998 ttgaggcccatccttgagggggaggccctgctcgtttaagctgtttgcaccccc 29076945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 179
Target Start/End: Original strand, 40357413 - 40357480
Alignment:
Q  104 cgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaatcaa 179  Q
    |||||||||| |||||||| |||||||||||||||||||||         ||||||||||||||||||||||||||    
T  40357413 cgtatatatgcggtacaccaagagatgaaaatgactaccgt--------ggaacccccacctaacaccaaaatcaa 40357480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 21763595 - 21763652
Alignment:
Q  65 tgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacc 122  Q
    ||||||||||| ||||||||||||||| |||||| || ||||||||||| | ||||||    
T  21763595 tgttctatttaaattttttaaaagataaatacaaagtatcgtatatatgcgatacacc 21763652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 124
Target Start/End: Complemental strand, 18201228 - 18201172
Alignment:
Q  68 tctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacaccta 124  Q
    |||||||| ||||||||||| ||| ||||||| || | |||||||||||||||||||    
T  18201228 tctatttaaattttttaaaatataaatacaagatgccatatatatgtggtacaccta 18201172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 152
Target Start/End: Original strand, 17800257 - 17800316
Alignment:
Q  93 atacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatga 152  Q
    ||||||| |||||||||||||| ||||||| | |  ||||||| ||||||||||||||||    
T  17800257 atacaagttgtcgtatatatgttgtacacccaaaagtgaaaatcactaccgtatgcatga 17800316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 47985202 - 47985253
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||   |||||||||||||||||  |||||||||||||||||||    
T  47985202 ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccc 47985253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 48984077 - 48984128
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||   |||||||||||||||||  |||||||||||||||||||    
T  48984077 ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccc 48984128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 140
Target Start/End: Original strand, 12419493 - 12419578
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgacta 140  Q
    |||||| | |||||||||||| ||||||||||||||| |||||| ||  | ||||| |||| |||| | | |||||||||| ||||    
T  12419493 aaaagaacaatgttctatttaaattttttaaaagataaatacaatgtaccttatatgtgtgatacatccaaagatgaaaatcacta 12419578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 250
Target Start/End: Complemental strand, 19691949 - 19691912
Alignment:
Q  213 tgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||||||||  |||||||||||||||||||    
T  19691949 tgagggaggcccagctctgttgagctgtttgcaccccc 19691912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 9014185 - 9014233
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatat 112  Q
    ||||| |||||| ||||||||||||||| |||||| |||| ||||||||    
T  9014185 atgttttatttaaattttttaaaagataaatacaatgtgttgtatatat 9014233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 46
Target Start/End: Original strand, 48983795 - 48983827
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgta 46  Q
    |||||||||||||||||||||||||||| ||||    
T  48983795 atgaaaagaggccaatgataaaatcaaaacgta 48983827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 172; Significance: 3e-92; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 14 - 261
Target Start/End: Original strand, 30832482 - 30832729
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    |||||||||||||| ||||||||||||| ||||        ||||| ||||||||||||||| ||||||||||| ||| ||||||| || ||||||||||    
T  30832482 atgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaagcgcgatgttctatttacattttttaaaaaataaatacaagatgccgtatatatg 30832581  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatcctt 213  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30832582 tggtacacccagagatgaaaatgactaccgtatgcatgaggaacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatcctt 30832681  T
Q  214 gagggaggcccagctcgtttgagctgtttgcaccccccagggacgccc 261  Q
    |||||||||||||||| ||||||||||||||||||| || ||||||||    
T  30832682 gagggaggcccagctcatttgagctgtttgcacccctcaaggacgccc 30832729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 56 - 261
Target Start/End: Original strand, 24710999 - 24711205
Alignment:
Q  56 aaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatga 155  Q
    |||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||  |||| |||||||||||||||||| ||||| ||    
T  24710999 aaagagtgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacactcagaggtgaaaatgactaccgtatacatgagga 24711098  T
Q  156 acccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagg 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||||    
T  24711099 acccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgggggaggcccagcttgtttgagctgtttgcaccccctcagg 24711198  T
Q  255 gacgccc 261  Q
    |||||||    
T  24711199 gacgccc 24711205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 13 - 179
Target Start/End: Original strand, 19737649 - 19737815
Alignment:
Q  13 gatgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatat 112  Q
    ||||||||||||||| |||||||||||||  ||         |||||||| |||||||||||||||||||| ||||||| |||||||||| |||||||||    
T  19737649 gatgaaaagaggccagtgataaaatcaaaatgttttttttttaaaagagcaatgttctatttatatttttttaaagataaatacaaggtgccgtatatat 19737748  T
Q  113 gtggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaatcaa 179  Q
    | ||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  19737749 gcggtacacctagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaa 19737815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 55 - 179
Target Start/End: Original strand, 13727398 - 13727522
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| |||| |||||||||||||||||| ||||| |    
T  13727398 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 13727497  T
Q  155 aacccccacctaacaccaaaatcaa 179  Q
    |||||||||||||||||||||||||    
T  13727498 aacccccacctaacaccaaaatcaa 13727522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 55 - 179
Target Start/End: Complemental strand, 21479601 - 21479477
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| |||| |||||||||||||||||| ||||| |    
T  21479601 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 21479502  T
Q  155 aacccccacctaacaccaaaatcaa 179  Q
    |||||||||||||||||||||||||    
T  21479501 aacccccacctaacaccaaaatcaa 21479477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 55 - 179
Target Start/End: Complemental strand, 21280652 - 21280528
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| |||| | |||||||||||||||| ||||| |    
T  21280652 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagg 21280553  T
Q  155 aacccccacctaacaccaaaatcaa 179  Q
    ||| |||||||||||||||||||||    
T  21280552 aactcccacctaacaccaaaatcaa 21280528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 14 - 175
Target Start/End: Original strand, 27788647 - 27788807
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    |||||||||||||| ||||||||||||| ||||        |||||||| || ||||||||||||||||||||||||| ||| |||||| ||||||||||    
T  27788647 atgaaaagaggccagtgataaaatcaaaacgtattttttt-aaaagagcaattttctatttatattttttaaaagataaatataaggtgccgtatatatg 27788745  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaa 175  Q
     |||||||| | || |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  27788746 cggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 27788807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 55 - 179
Target Start/End: Complemental strand, 33774224 - 33774100
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||||  |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| | |  |||||||||||||||||| ||||| |    
T  33774224 aaaagagtaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaatgtgaaaatgactaccgtatacatgagg 33774125  T
Q  155 aacccccacctaacaccaaaatcaa 179  Q
    |||||||||||||||||||||||||    
T  33774124 aacccccacctaacaccaaaatcaa 33774100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 55 - 175
Target Start/End: Complemental strand, 17354061 - 17353941
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||| ||| |||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||| | |  |||||||||||| ||||| |||||||    
T  17354061 aaaaaagcaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaatgtgaaaatgactatcgtatacatgatg 17353962  T
Q  155 aacccccacctaacaccaaaa 175  Q
    |||||||||||||||||||||    
T  17353961 aacccccacctaacaccaaaa 17353941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 64 - 175
Target Start/End: Complemental strand, 28075881 - 28075770
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccac 163  Q
    |||||||||||||||||||||||||||| ||| |||||| |||||||||| | |||||| | || |||||||||||||||||| ||||| ||||||||||    
T  28075881 atgttctatttatattttttaaaagataaatataaggtgccgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgaggaacccccac 28075782  T
Q  164 ctaacaccaaaa 175  Q
    ||||||||||||    
T  28075781 ctaacaccaaaa 28075770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 20711719 - 20711833
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||||| |||||||||||||||||||||||||||| ||| |||||| |||||||||| |||||||| | || |||||||||||||||||| ||||| |    
T  20711719 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 20711818  T
Q  155 aacccccacctaaca 169  Q
    |||||||| ||||||    
T  20711819 aacccccatctaaca 20711833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 55 - 175
Target Start/End: Complemental strand, 34397964 - 34397844
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| || | |||||||||| ||||  ||||| |    
T  34397964 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgacgtatatatgcggtacacctaaaggtaaaaatgactatcgtaaacatgagg 34397865  T
Q  155 aacccccacctaacaccaaaa 175  Q
    |||| |||| |||||||||||    
T  34397864 aacctccacttaacaccaaaa 34397844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 56 - 152
Target Start/End: Original strand, 1155849 - 1155945
Alignment:
Q  56 aaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatga 152  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||| |||||||| |||||| | |||| |||||||||||||||||| |||||    
T  1155849 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcatatatatgcggtacatccagaggtgaaaatgactaccgtatacatga 1155945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 14 - 136
Target Start/End: Original strand, 27314136 - 27314259
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatatttttt-aaaagatatatacaaggtgtcgtatatat 112  Q
    |||||||||||||| ||||||||||||| ||||        |||||||| |||||||||||||||||||| |||||||| |||||||||| |||||||||    
T  27314136 atgaaaagaggccagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatattttttaaaaagataaatacaaggtgccgtatatat 27314235  T
Q  113 gtggtacacctagagatgaaaatg 136  Q
    | |||||||  |||| ||||||||    
T  27314236 gcggtacactcagaggtgaaaatg 27314259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 204 - 262
Target Start/End: Complemental strand, 21280394 - 21280335
Alignment:
Q  204 gcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagggacgccct 262  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  21280394 gcccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcagggacgccct 21280335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 23070889 - 23070940
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23070889 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 23070940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 200 - 261
Target Start/End: Original strand, 13727650 - 13727712
Alignment:
Q  200 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagggacgccc 261  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  13727650 tgaggcccatctttgagggaggcccagctcgtttgagctgtttgcaccccctcagggacgccc 13727712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 200 - 261
Target Start/End: Complemental strand, 21479349 - 21479287
Alignment:
Q  200 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagggacgccc 261  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  21479349 tgaggcccatccttgagggaggcccagctcgttttagctgtttgcaccccctcagggacgccc 21479287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 14 - 175
Target Start/End: Original strand, 235182 - 235344
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcg--tatata 111  Q
    |||||||||| ||| ||||||||||||| ||||         ||| ||| ||| |||||||||||||||||||||||| ||| |||||| ||  ||||||    
T  235182 atgaaaagagaccagtgataaaatcaaaacgtatttttttttaaaaagcaatgatctatttatattttttaaaagataaatataaggtgccgggtatata 235281  T
Q  112 tgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaa 175  Q
    |   ||||||| | ||||||||||||||||||||| |||||  |||||||||| ||||||||||    
T  235282 taccgtacacccaaagatgaaaatgactaccgtatacatgagaaacccccacc-aacaccaaaa 235344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 199 - 258
Target Start/End: Original strand, 19741223 - 19741283
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagggacg 258  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  19741223 ttgaggtccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcagggacg 19741283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 12083640 - 12083691
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  12083640 ttgaggcccatccttgaggaaggcccagctcgtttgagctgtttgcaccccc 12083691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 67 - 158
Target Start/End: Original strand, 21183686 - 21183777
Alignment:
Q  67 ttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacc 158  Q
    ||||||||| ||||||||||||||| |||||| ||  ||||||||||||||||||| | || ||||||| |||||||||| ||||| |||||    
T  21183686 ttctatttaaattttttaaaagataaatacaaagtagcgtatatatgtggtacacccaaagttgaaaatcactaccgtatacatgaggaacc 21183777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 208 - 261
Target Start/End: Original strand, 27314773 - 27314827
Alignment:
Q  208 atccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagggacgccc 261  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  27314773 atccttgagggaggcccagctcgtttgagctgtttgcaccccctcagggacgccc 27314827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 6159536 - 6159480
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtaca 120  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||    
T  6159536 atgttctatttatattttttaaaagataaatacaatgtgtcgtatatatgcggtaca 6159480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 200 - 261
Target Start/End: Complemental strand, 33773964 - 33773903
Alignment:
Q  200 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagggacgccc 261  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||    
T  33773964 tgaggcccatccttgagggaggcccagctcatttgag-tgtttgcaccccctcagggacgccc 33773903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 1156017 - 1156068
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    ||||||||||||||| |||||| || ||||||||||||||||||||||||||    
T  1156017 ttgaggcccatccttaagggagacctagctcgtttgagctgtttgcaccccc 1156068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 64 - 158
Target Start/End: Original strand, 2477592 - 2477686
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacc 158  Q
    |||||| ||||| ||||||||||||||| |||||||||| | |||||||| | |||||| | |  ||||||| |||||||||| ||||| |||||    
T  2477592 atgttcaatttaaattttttaaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 2477686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 208 - 250
Target Start/End: Original strand, 27579084 - 27579126
Alignment:
Q  208 atccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  27579084 atccttgagggaggcccagctcgtttgagctggttgcaccccc 27579126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 19987032 - 19986981
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||  ||||||||||||||||||  |||||||||||||||||||    
T  19987032 ttgaggcccataattgagggaggcccagctctgttgagctgtttgcaccccc 19986981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 158
Target Start/End: Complemental strand, 20611888 - 20611794
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacc 158  Q
    |||||||| ||| |||||||||| |||| ||||||||||||||||||||  |  ||| | | || ||||||| |||||||||| ||||| |||||    
T  20611888 atgttctacttaaattttttaaacgataaatacaaggtgtcgtatatatacgacacatccaaaggtgaaaatcactaccgtatacatgaggaacc 20611794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 17353825 - 17353774
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||   |||||||||||||||||  |||||||||||||||||||    
T  17353825 ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccc 17353774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 27788922 - 27788973
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||   |||||||||||||||||  |||||||||||||||||||    
T  27788922 ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccc 27788973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 113
Target Start/End: Complemental strand, 30121860 - 30121811
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    ||||| |||||| ||||||||||| ||| |||||||||||| ||||||||    
T  30121860 atgttttatttaaattttttaaaaaataaatacaaggtgtcatatatatg 30121811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 20711952 - 20712000
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacc 247  Q
    |||||||||||   |||||||||||||||||  ||||||||||||||||    
T  20711952 ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacc 20712000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 171; Significance: 1e-91; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 56 - 261
Target Start/End: Original strand, 15480086 - 15480292
Alignment:
Q  56 aaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatga 155  Q
    ||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||| |||| |||||||||||||||||||||||| ||    
T  15480086 aaagaccgatgttctatttatattttttaaaagataaatacaagatgtcgtatatatgcggtacacccagaggtgaaaatgactaccgtatgcatgagga 15480185  T
Q  156 acccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagg 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  15480186 acccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcagg 15480285  T
Q  255 gacgccc 261  Q
    |||||||    
T  15480286 gacgccc 15480292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 163; E-Value: 8e-87
Query Start/End: Original strand, 56 - 261
Target Start/End: Complemental strand, 19523302 - 19523096
Alignment:
Q  56 aaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatga 155  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| |||| |||||||||||||| ||| ||||| ||    
T  19523302 aaagagcggtgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgagga 19523203  T
Q  156 acccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagg 254  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19523202 acccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcagg 19523103  T
Q  255 gacgccc 261  Q
    |||||||    
T  19523102 gacgccc 19523096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 14 - 262
Target Start/End: Original strand, 36187834 - 36188083
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    ||||||||||| || ||||||||||||| |||         ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||    
T  36187834 atgaaaagaggtcagtgataaaatcaaaacgttttttttttaaaagagcgatgttctatttatattttttaaaatataaatacaaggtgccgtatatatg 36187933  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatcctt 213  Q
     |||||||| |||| |||||||||||||||||| |||||  |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36187934 cggtacacccagaggtgaaaatgactaccgtatacatgagaaacctccacctaacaccaaaattaatcatgaggaacccccactcttgaggcccatcctt 36188033  T
Q  214 gagggaggcccagctcgtttgagctgtttgcaccccc-cagggacgccct 262  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  36188034 gagggaggcccaactcgtttgagctgtttgcaccccctcagggacgccct 36188083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 2275036 - 2274813
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnn-aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatat 112  Q
    |||||||||||||| ||||||||||||| ||||         ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  2275036 atgaaaagaggccagtgataaaatcaaaacgtatttttttttaaaagagcgatgttctatttatattttttaaaagataaatacaaggtatcgtatatat 2274937  T
Q  113 gtggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatcct 212  Q
    |  ||||||| |||| |||||||||||||||||| || || |||||||||||||||||||||||||||||              |||||||| |||||||    
T  2274936 gcagtacacccagaggtgaaaatgactaccgtatacacgaggaacccccacctaacaccaaaatcaatca--------------tcttgaggtccatcct 2274851  T
Q  213 tgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    ||||||||||||| ||| ||||||||||||||||||||    
T  2274850 tgagggaggcccaactcatttgagctgtttgcaccccc 2274813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 16592029 - 16592194
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    |||||||||||||||||||||||||||| | ||        |||||||| |||||||||||||||||| ||||||||| ||||| |||||||||||||||    
T  16592029 atgaaaagaggccaatgataaaatcaaaacatattttttttaaaagagcaatgttctatttatattttctaaaagataaatacagggtgtcgtatatatg 16592128  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaatcaa 179  Q
     |||||||| |||| ||||||||||||||||||  |||| ||||||||||||||||||||||||||    
T  16592129 cggtacacccagaggtgaaaatgactaccgtatatatgaggaacccccacctaacaccaaaatcaa 16592194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 55 - 179
Target Start/End: Original strand, 34756362 - 34756486
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| |||| |||||||||||||||||| ||||| |    
T  34756362 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 34756461  T
Q  155 aacccccacctaacaccaaaatcaa 179  Q
    ||||||||||||||| |||||||||    
T  34756462 aacccccacctaacaacaaaatcaa 34756486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 55 - 176
Target Start/End: Complemental strand, 27079115 - 27078994
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||| || ||||||||||||| |||| ||||| |    
T  27079115 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctaaaggtgaaaatgactactgtatacatgagg 27079016  T
Q  155 aacccccacctaacaccaaaat 176  Q
    ||||||||||||||||||||||    
T  27079015 aacccccacctaacaccaaaat 27078994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 55 - 175
Target Start/End: Original strand, 28822338 - 28822458
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||||| |||||||||||||||||||||||||||| ||| |||||| |||||||||| |||||||| | || |||||||||||||||||| |||||||    
T  28822338 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgatg 28822437  T
Q  155 aacccccacctaacaccaaaa 175  Q
    |||||||||||||||||||||    
T  28822438 aacccccacctaacaccaaaa 28822458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 55 - 176
Target Start/End: Complemental strand, 30854433 - 30854312
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||  |||| |||||||||||| ||||| ||||| |    
T  30854433 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactatcgtatacatgagg 30854334  T
Q  155 aacccccacctaacaccaaaat 176  Q
    ||||||||||||||||||||||    
T  30854333 aacccccacctaacaccaaaat 30854312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 14 - 175
Target Start/End: Original strand, 38869318 - 38869479
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    ||||||||||| || | ||||||||||| ||||        |||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  38869318 atgaaaagaggtcagttataaaatcaaaacgtattttttttaaaagagcaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatg 38869417  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaa 175  Q
     |||||||| | || |||||||||||||||||| |||||  |||||||||||||||||||||    
T  38869418 cggtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccacctaacaccaaaa 38869479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 64 - 175
Target Start/End: Original strand, 16198799 - 16198910
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccac 163  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||| | |||||| | || |||||||||||||||||| ||||| ||||||||||    
T  16198799 atgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcgatacacccaaaggtgaaaatgactaccgtatacatgaggaacccccac 16198898  T
Q  164 ctaacaccaaaa 175  Q
    ||||||||||||    
T  16198899 ctaacaccaaaa 16198910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 64 - 175
Target Start/End: Complemental strand, 9364386 - 9364275
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccac 163  Q
    |||||||||||||||||||||||||||| ||| |||||| |||||||||| |||||||| | || |||||||||||||||||| ||||| ||||||||||    
T  9364386 atgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccac 9364287  T
Q  164 ctaacaccaaaa 175  Q
    |||||| |||||    
T  9364286 ctaacatcaaaa 9364275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 19 - 161
Target Start/End: Original strand, 23284022 - 23284164
Alignment:
Q  19 aagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggta 118  Q
    ||||||||| ||||||||||||| ||||        |||||||| |||||||||||||||||||||||   || ||||||||||||||||||||| ||||    
T  23284022 aagaggccagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatattttttaaagactaaatacaaggtgtcgtatatatgcggta 23284121  T
Q  119 cacctagagatgaaaatgactaccgtatgcatgatgaaccccc 161  Q
    |||| | ||||||||||||||||||||| ||||| ||||||||    
T  23284122 cacccaaagatgaaaatgactaccgtatacatgaggaaccccc 23284164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 64 - 175
Target Start/End: Original strand, 40389541 - 40389652
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccac 163  Q
    |||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||| | | || ||||||||||||||||||  |||| ||||||||||    
T  40389541 atgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacatccaaaggtgaaaatgactaccgtatttatgaggaacccccac 40389640  T
Q  164 ctaacaccaaaa 175  Q
    ||||||| ||||    
T  40389641 ctaacactaaaa 40389652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 64 - 175
Target Start/End: Original strand, 16799332 - 16799443
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccac 163  Q
    |||||||||||||||||||||||| ||| ||| |||||| |||||||||| |||||||| | || ||||||||| |||||||| ||||| ||||||||||    
T  16799332 atgttctatttatattttttaaaaaataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgaggaacccccac 16799431  T
Q  164 ctaacaccaaaa 175  Q
     |||||||||||    
T  16799432 ataacaccaaaa 16799443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 14 - 152
Target Start/End: Original strand, 31194567 - 31194704
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    |||||||||| ||| ||||||||||||| ||||        |||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  31194567 atgaaaagagaccagtgataaaatcaaaacgtatttcttttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatg 31194666  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatga 152  Q
     |||| ||| |||| ||||||| |||||||||| |||||    
T  31194667 cggtaaacccagaggtgaaaat-actaccgtatacatga 31194704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 56 - 137
Target Start/End: Complemental strand, 7338102 - 7338021
Alignment:
Q  56 aaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatga 137  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| || |||||||||    
T  7338102 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacctaaaggtgaaaatga 7338021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 152
Target Start/End: Original strand, 22986512 - 22986651
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnn-aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatat 112  Q
    |||||||||||||| ||||||||||||| ||||         |||||||| |||||||||| ||||||||||||||| | |||||| |||||||||||||    
T  22986512 atgaaaagaggccagtgataaaatcaaaacgtaattttttttaaaagagcaatgttctattaatattttttaaaagacaaatacaaagtgtcgtatatat 22986611  T
Q  113 gtggtacacctagagatgaaaatgactaccgtatgcatga 152  Q
    | |||||||| | || |||||||||||||||||| |||||    
T  22986612 gcggtacacccataggtgaaaatgactaccgtatacatga 22986651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 64 - 158
Target Start/End: Original strand, 14318390 - 14318484
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacc 158  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||| | | | |||||||| |||||||||| ||||| |||||    
T  14318390 atgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacatccaaaaatgaaaatcactaccgtatacatgaggaacc 14318484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 69 - 175
Target Start/End: Complemental strand, 27924172 - 27924066
Alignment:
Q  69 ctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaac 168  Q
    ||||||||||||||||||||||| ||| |||||| |||||||||| |||||| | | || | |||||||||||||||| ||||| |||| ||| ||||||    
T  27924172 ctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtaaaaatgactaccgtatacatgaggaacgcccgcctaac 27924073  T
Q  169 accaaaa 175  Q
    |||||||    
T  27924072 accaaaa 27924066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 55 - 175
Target Start/End: Complemental strand, 7671029 - 7670908
Alignment:
Q  55 aaaagagcgatgttctatttatatttttt-aaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgat 153  Q
    |||| ||| |||||||||||||||||||| |||||||| ||| |||||| ||||||| |  |||||||| | || |||||||||||||||||| |||||     
T  7671029 aaaaaagcaatgttctatttatatttttttaaaagataaatataaggtgccgtatatttacggtacacccaaaggtgaaaatgactaccgtatacatgag 7670930  T
Q  154 gaacccccacctaacaccaaaa 175  Q
    | | ||||||||||||||||||    
T  7670929 gtatccccacctaacaccaaaa 7670908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 31881430 - 31881526
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatga 152  Q
    |||||||| |||||||||||||||||||||||||||| ||||| |||| |||||||||| || ||| | |||||||||||| |||||||||| |||||    
T  31881430 aaaagagcaatgttctatttatattttttaaaagataaatacacggtgccgtatatatgcggaacatccagagatgaaaat-actaccgtatacatga 31881526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 36868872 - 36868969
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatga 152  Q
    |||||| | ||||||||||||  |||||||||||||| |||||||||||||||||||||||||||||| | |  ||||||| |||||||||| |||||    
T  36868872 aaaagaacaatgttctatttaatttttttaaaagataaatacaaggtgtcgtatatatgtggtacacccaaatgtgaaaatcactaccgtatacatga 36868969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 31881590 - 31881653
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagggacgccc 261  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  31881590 ttgaggtccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcagggacgccc 31881653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 55 - 158
Target Start/End: Complemental strand, 34426007 - 34425904
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||| | |||||||||||  ||||||||||||||| |||||||||| |||||||||||| |||||||| |||| ||||| | |||||||| ||||| |    
T  34426007 aaaagaacaatgttctatttcaattttttaaaagataaatacaaggtgccgtatatatgtgatacacctaaagattaaaatcattaccgtatacatgagg 34425908  T
Q  155 aacc 158  Q
    ||||    
T  34425907 aacc 34425904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 200 - 250
Target Start/End: Original strand, 34756615 - 34756665
Alignment:
Q  200 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34756615 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 34756665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 55 - 152
Target Start/End: Complemental strand, 10407565 - 10407468
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatga 152  Q
    |||||| | |||||||||||| ||||||||||||||| | ||||||||||||| |||||| ||||| ||| |  ||||||| ||||||||||||||||    
T  10407565 aaaagaacaatgttctatttaaattttttaaaagataaacacaaggtgtcgtacatatgttgtacatctaaaagtgaaaattactaccgtatgcatga 10407468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 202 - 261
Target Start/End: Original strand, 22987470 - 22987531
Alignment:
Q  202 aggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc--cagggacgccc 261  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  22987470 aggcccatctttgagggaggcccagctcgtttgagctgtttgcacccccctcagggacgccc 22987531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 2024638 - 2024735
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatga 152  Q
    |||||| | |||||||||||| ||||||| ||||||| |||||| ||| |||||||||||| |||||| | |||||||||| |||||| ||| |||||    
T  2024638 aaaagaacaatgttctatttaaatttttttaaagataaatacaatgtgccgtatatatgtgatacacccaaagatgaaaatcactaccatatacatga 2024735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 16592845 - 16592908
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagggacgccc 261  Q
    ||||||||||||||| | ||||| |||||||||||||||||||||||||||| |||||||||||    
T  16592845 ttgaggcccatccttaaaggaggtccagctcgtttgagctgtttgcaccccctcagggacgccc 16592908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 30853332 - 30853281
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  30853332 ttgaggtccatccttgaaggaggcccagctcgtttgagctgtttgcaccccc 30853281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 22648741 - 22648793
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtgg 116  Q
    |||||||||||| ||||||||||||||| |||||| |||||||||||||||||    
T  22648741 atgttctatttaaattttttaaaagataaatacaatgtgtcgtatatatgtgg 22648793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 55 - 146
Target Start/End: Original strand, 1366522 - 1366613
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtat 146  Q
    |||||| | |||||||||||| |||||||| |||||| ||||||| ||| ||||||||| | |||||||| |  ||||||| ||||||||||    
T  1366522 aaaagaacaatgttctatttaaattttttataagataaatacaagatgtggtatatatgcgatacacctaaatgtgaaaatcactaccgtat 1366613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 55 - 158
Target Start/End: Complemental strand, 33037884 - 33037781
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||| | ||||| |||||| ||||||||||||||| ||||||| | |||||||||||| ||||||| | || ||||||  | |||||||| ||||| |    
T  33037884 aaaagaacaatgttttatttaaattttttaaaagataaatacaagatatcgtatatatgttgtacacccaaaggtgaaaaccattaccgtatacatgagg 33037785  T
Q  155 aacc 158  Q
    ||||    
T  33037784 aacc 33037781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 64 - 158
Target Start/End: Original strand, 2530902 - 2530996
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacc 158  Q
    ||||||||||||  |||||||||||||| |||||| |||||||||||||  |||||| | | || ||||||| ||||| |||| ||||| |||||    
T  2530902 atgttctatttaagttttttaaaagataaatacaatgtgtcgtatatatacggtacatccaaaggtgaaaatcactactgtatacatgaggaacc 2530996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 112
Target Start/End: Complemental strand, 24395834 - 24395786
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatat 112  Q
    |||||||||||| ||||||||||||||| ||||||||||| ||||||||    
T  24395834 atgttctatttaaattttttaaaagataaatacaaggtgttgtatatat 24395786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 152
Target Start/End: Original strand, 26718954 - 26719042
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatga 152  Q
    |||||||||||| | ||||||||||||| |||||| |||||||||||||| | |||||  | || ||||||| ||||||| || |||||    
T  26718954 atgttctatttaaaatttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatga 26719042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 64 - 152
Target Start/End: Original strand, 26988698 - 26988786
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatga 152  Q
    |||||||||||| | ||||||||||||| |||||| |||||||||||||| | |||||  | || ||||||| ||||||| || |||||    
T  26988698 atgttctatttaaaatttttaaaagataaatacaaagtgtcgtatatatgcgatacactcaaaggtgaaaatcactaccgcatacatga 26988786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 31194767 - 31194815
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacc 247  Q
    |||||||||||||||||| ||||||||| ||||||||| ||||||||||    
T  31194767 ttgaggcccatccttgagagaggcccagttcgtttgagttgtttgcacc 31194815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 55 - 158
Target Start/End: Original strand, 11242314 - 11242417
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||| | ||||||||||||  |||||||||||||| ||||||  ||  ||||||||||| |||| | | ||||| |||| |||||||||| ||||| |    
T  11242314 aaaagaacaatgttctatttaatttttttaaaagataaatacaaaatgatgtatatatgtgatacaaccaaagatggaaatcactaccgtatacatgagg 11242413  T
Q  155 aacc 158  Q
    ||||    
T  11242414 aacc 11242417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 55 - 104
Target Start/End: Complemental strand, 606258 - 606209
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtc 104  Q
    |||||| | |||||||||||| ||||||||||||||| ||||||||||||    
T  606258 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtc 606209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 64 - 113
Target Start/End: Complemental strand, 2412183 - 2412134
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    |||||||||||| ||||||||||| ||| |||||| ||||||||||||||    
T  2412183 atgttctatttaaattttttaaaaaataaatacaaagtgtcgtatatatg 2412134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 16199026 - 16199077
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||   |||||||||||||||||  |||||||||||||||||||    
T  16199026 ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccc 16199077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 64 - 146
Target Start/End: Complemental strand, 17345051 - 17344969
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtat 146  Q
    |||||||||||| |||||||| |  ||| ||||||| |||| | |||||| |||||||| | |||| ||||| ||||||||||    
T  17345051 atgttctatttaaattttttatataataaatacaagatgtcatgtatatgcggtacacccaaagataaaaattactaccgtat 17344969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 40794323 - 40794420
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatga 152  Q
    |||||| | ||||| |||||| ||||||||||||| | |||||| | | |||| |||| || |||||| | || ||||||| |||||||||| |||||    
T  40794323 aaaagaacaatgttttatttaaattttttaaaagacaaatacaaagagccgtaaatatatgatacaccaaaaggtgaaaatcactaccgtatacatga 40794420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 258
Target Start/End: Complemental strand, 27923951 - 27923891
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagggacg 258  Q
    |||||||||||   ||||||||| |||||||  ||||||||||||||||||| ||||||||    
T  27923951 ttgaggcccatgactgagggaggtccagctctgttgagctgtttgcaccccctcagggacg 27923891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 78 - 122
Target Start/End: Original strand, 41911636 - 41911680
Alignment:
Q  78 ttttttaaaagatatatacaaggtgtcgtatatatgtggtacacc 122  Q
    |||||||||||| | ||||||||||||||||||| | ||||||||    
T  41911636 ttttttaaaagagaaatacaaggtgtcgtatataagcggtacacc 41911680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 166; Significance: 1e-88; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 56 - 261
Target Start/End: Complemental strand, 47467790 - 47467585
Alignment:
Q  56 aaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatga 155  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| | |||||| |||| |||||||||||||||||| ||||| ||    
T  47467790 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcgatacacccagaggtgaaaatgactaccgtatacatgagga 47467691  T
Q  156 acccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccccaggg 255  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  47467690 acccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggctcagctcgtttgagctgtttgcacccctcaggg 47467591  T
Q  256 acgccc 261  Q
    ||||||    
T  47467590 acgccc 47467585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 55 - 250
Target Start/End: Original strand, 53149313 - 53149508
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||  |||||| |||||||||||||||| ||||| |    
T  53149313 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagagataaaaatgactaccgtatacatgagg 53149412  T
Q  155 aacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  53149413 aacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttggtggaggcccagctcgtttgagctgtttgcaccccc 53149508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 55 - 250
Target Start/End: Complemental strand, 21582878 - 21582683
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||| | ||||| |||||||||||||||||||||| |||||||||| |||||||||| |||||||| |||| |||||||||||||||||| ||||| |    
T  21582878 aaaagaacaatgttttatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 21582779  T
Q  155 aacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  21582778 aacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttaagggatgcccagctcgtttgagctgtttgcaccccc 21582683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 55 - 261
Target Start/End: Complemental strand, 42098908 - 42098701
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||| ||  |||| |||||||||||||||||| ||||| |    
T  42098908 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatacatgagg 42098809  T
Q  155 aacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cag 253  Q
    |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||    
T  42098808 aacccctacttaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgtgggaggcccaactcgtttgagctgtttgcaccccctcag 42098709  T
Q  254 ggacgccc 261  Q
    ||||||||    
T  42098708 ggacgccc 42098701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 55 - 179
Target Start/End: Original strand, 54619202 - 54619326
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| |||| |||||||||||||||||| ||||| |    
T  54619202 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 54619301  T
Q  155 aacccccacctaacaccaaaatcaa 179  Q
    |||||||||||||||||||||||||    
T  54619302 aacccccacctaacaccaaaatcaa 54619326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 3953854 - 3954019
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    |||||||||||||| ||||||||| |||  |||        |||||| | |||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  3953854 atgaaaagaggccagtgataaaattaaaatgtattttttttaaaagaacaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatg 3953953  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaatcaa 179  Q
     |||||||| |||| |||||||||  ||||||| ||||| ||||||||||||||||||||||||||    
T  3953954 cggtacacccagaggtgaaaatgaaaaccgtatacatgaggaacccccacctaacaccaaaatcaa 3954019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 55 - 179
Target Start/End: Original strand, 38681092 - 38681216
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||| ||||| |||| |||||| | |||| |||||||||||||||||| ||||| |    
T  38681092 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatgtatgcggtacatccagaggtgaaaatgactaccgtatacatgagg 38681191  T
Q  155 aacccccacctaacaccaaaatcaa 179  Q
    || ||||||||||||||||||||||    
T  38681192 aaaccccacctaacaccaaaatcaa 38681216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 14 - 175
Target Start/End: Complemental strand, 44708625 - 44708464
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    |||||||||||||| ||||||||||||| ||||        |||| ||  |||||||||||||||||||||||||||| ||| |||||| |||||||||     
T  44708625 atgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaaagaaatgttctatttatattttttaaaagataaatataaggtgccgtatatatc 44708526  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaa 175  Q
     |||||||| | || |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  44708525 cggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 44708464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 14 - 179
Target Start/End: Complemental strand, 18372631 - 18372462
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatat- 112  Q
    ||||||||||| || ||||||||||||| ||||        |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||     
T  18372631 atgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatg 18372532  T
Q  113 ---gtggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaatcaa 179  Q
       | |||||||  |||| |||||||||||||||||| ||||| ||| ||||| ||||||||||||||||    
T  18372531 cgcgcggtacacacagaggtgaaaatgactaccgtatacatgaggaatccccatctaacaccaaaatcaa 18372462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 55 - 179
Target Start/End: Original strand, 36716024 - 36716148
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| |||| |||||| ||| ||||||| | ||| |    
T  36716024 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaacgaccaccgtatacgtgagg 36716123  T
Q  155 aacccccacctaacaccaaaatcaa 179  Q
     ||||||||||||||||||||||||    
T  36716124 gacccccacctaacaccaaaatcaa 36716148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 8073296 - 8073461
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    ||||||||||| || ||||||||||||| ||||        |||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  8073296 atgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagtaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatg 8073395  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaatcaat 180  Q
     |||||||| | |  |||||||||||||||||| ||||| ||| |||||| ||||||||||| ||||    
T  8073396 cggtacacccaaaagtgaaaatgactaccgtatacatgaggaa-ccccacataacaccaaaagcaat 8073461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 14 - 175
Target Start/End: Original strand, 43207196 - 43207356
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    |||||||||||||| ||||||| | ||| ||||        |||||||| |||||||||||||||||||||||||||| ||| |||||| ||||||||||    
T  43207196 atgaaaagaggccagtgataaattaaaaacgtattttttttaaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatg 43207295  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaa 175  Q
     |||||| | | || |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  43207296 cggtacatc-aaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 43207356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 14 - 175
Target Start/End: Original strand, 50939191 - 50939352
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    |||||||||||||| ||||||||||||| ||||        |||| ||| ||| |||||||||||||||||||||||| ||| |||||| |||||||||     
T  50939191 atgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaaagcaatgatctatttatattttttaaaagataaatataaggtgccgtatatata 50939290  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaa 175  Q
    ||||||||| | || | |||||||||||||||| ||||| |||||||| |||||||||||||    
T  50939291 tggtacacccaaaggtaaaaatgactaccgtatacatgaggaacccccgcctaacaccaaaa 50939352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 55 - 179
Target Start/End: Original strand, 27078568 - 27078692
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||| ||| |||||||||||||||||||||||||||| |||||| ||| |||||||||| |||| ||| |||| |||||||||||||||||| |||||      
T  27078568 aaaaaagcaatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgaga 27078667  T
Q  155 aacccccacctaacaccaaaatcaa 179  Q
    |||||| ||||||||||||||||||    
T  27078668 aacccctacctaacaccaaaatcaa 27078692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 55 - 179
Target Start/End: Original strand, 27084365 - 27084489
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||| ||| |||||||||||||||||||||||||||| |||||| ||| |||||||||| |||| ||| |||| |||||||||||||||||| |||||      
T  27084365 aaaaaagcaatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtatacccagaggtgaaaatgactaccgtatacatgaga 27084464  T
Q  155 aacccccacctaacaccaaaatcaa 179  Q
    |||||| ||||||||||||||||||    
T  27084465 aacccctacctaacaccaaaatcaa 27084489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 64 - 175
Target Start/End: Original strand, 34290644 - 34290755
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccac 163  Q
    |||||||||||||||||||||||||||| ||| |||||| |||||||||| |||||||| | || ||||||||||||||||||  |||| ||||||||||    
T  34290644 atgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatatatgaggaacccccac 34290743  T
Q  164 ctaacaccaaaa 175  Q
    ||||||||||||    
T  34290744 ctaacaccaaaa 34290755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 181 - 261
Target Start/End: Original strand, 50258716 - 50258797
Alignment:
Q  181 catgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagggacgccc 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  50258716 catgaggaacccccactcttgaggcccatccttgagggaggcccagctcatttgagctgtttgcaccccctcagggacgccc 50258797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 64 - 175
Target Start/End: Complemental strand, 37168465 - 37168354
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccac 163  Q
    |||||||||||||||||||||||||||| ||| |||||| ||||||||||||||| ||| | || |||||||||||||||||| ||||| |||| |||||    
T  37168465 atgttctatttatattttttaaaagataaatataaggtgccgtatatatgtggtatacccaaaggtgaaaatgactaccgtatacatgaggaactcccac 37168366  T
Q  164 ctaacaccaaaa 175  Q
    ||||||| ||||    
T  37168365 ctaacactaaaa 37168354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 64 - 175
Target Start/End: Original strand, 53506892 - 53507003
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccac 163  Q
    |||||||||||||||||||||||||||| ||| |||||  |||||||||| |||||||| | || |||||||||||||||||| |||||  |||||||||    
T  53506892 atgttctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagaaacccccac 53506991  T
Q  164 ctaacaccaaaa 175  Q
    ||||||||||||    
T  53506992 ctaacaccaaaa 53507003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 55 - 163
Target Start/End: Original strand, 50258622 - 50258731
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctaga-gatgaaaatgactaccgtatgcatgat 153  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| ||||||||  || | ||||||||||||  ||||||||||     
T  50258622 aaaagagcgatgttctatttatattttttaaaaaataaatacaaggtgtcgtatatatgcggtacacccggagggtgaaaatgactattgtatgcatgag 50258721  T
Q  154 gaacccccac 163  Q
    ||||||||||    
T  50258722 gaacccccac 50258731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 14 - 152
Target Start/End: Complemental strand, 36606113 - 36605975
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaa-gatatatacaaggtgtcgtatatat 112  Q
    ||||||||||| || ||||||||||||| ||||        || ||||| |||||||||||||||||||||||| |||| |||||||||| |||||||||    
T  36606113 atgaaaagaggtcagtgataaaatcaaaacgtattttttttaatagagcaatgttctatttatattttttaaaaagataaatacaaggtgccgtatatat 36606014  T
Q  113 gtggtacacctagagatgaaaatgactaccgtatgcatga 152  Q
    | |||||||| |||||||||||| |||||||||| |||||    
T  36606013 gcggtacacccagagatgaaaat-actaccgtatacatga 36605975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 64 - 175
Target Start/End: Original strand, 54407166 - 54407276
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccac 163  Q
    |||||||||||||||||||||||||||| ||| |||||| |||||||||| |||||| | | || |||||||||||||||||| ||| |  |||||||||    
T  54407166 atgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacat-agtaacccccac 54407264  T
Q  164 ctaacaccaaaa 175  Q
    ||||||||||||    
T  54407265 ctaacaccaaaa 54407276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 14 - 175
Target Start/End: Original strand, 9878645 - 9878806
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    ||||||||||| || |||||||||| || ||||        |||||||| || ||||||||||||||||||||||||| ||| ||||||  |||||||||    
T  9878645 atgaaaagaggtcagtgataaaatctaaacgtattttttttaaaagagcaatattctatttatattttttaaaagataaatataaggtgcagtatatatg 9878744  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaa 175  Q
     |||||||| | || |||||||||||| ||||| ||| | ||||||||| ||||| ||||||    
T  9878745 cggtacacccaaaggtgaaaatgactatcgtatacataaggaacccccatctaacgccaaaa 9878806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 200 - 261
Target Start/End: Original strand, 36716276 - 36716338
Alignment:
Q  200 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagggacgccc 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  36716276 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcagggacgccc 36716338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 200 - 261
Target Start/End: Original strand, 38681348 - 38681410
Alignment:
Q  200 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagggacgccc 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  38681348 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcagggacgccc 38681410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 3954852 - 3954915
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagggacgccc 261  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3954852 ttgaggtccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcagggacgccc 3954915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 200 - 250
Target Start/End: Original strand, 27078819 - 27078869
Alignment:
Q  200 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27078819 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 27078869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 200 - 250
Target Start/End: Original strand, 27084616 - 27084666
Alignment:
Q  200 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27084616 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 27084666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 93 - 179
Target Start/End: Original strand, 29620425 - 29620511
Alignment:
Q  93 atacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaatcaa 179  Q
    |||||||||| |||||||||| |||| | | |||| |||||||||||||||||| ||||| ||||||||||||||||||| ||||||    
T  29620425 atacaaggtgccgtatatatgcggtatatccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccacaatcaa 29620511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 200 - 250
Target Start/End: Original strand, 54619454 - 54619504
Alignment:
Q  200 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54619454 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 54619504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 200 - 249
Target Start/End: Complemental strand, 36605911 - 36605862
Alignment:
Q  200 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36605911 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 36605862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 199 - 246
Target Start/End: Complemental strand, 13795253 - 13795206
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcac 246  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13795253 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcac 13795206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 64 - 146
Target Start/End: Complemental strand, 25855519 - 25855438
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtat 146  Q
    |||||||||||| ||||||||||||||| |||||||||||||||||||||| || |||| | || ||||||| ||||||||||    
T  25855519 atgttctatttaaattttttaaaagata-atacaaggtgtcgtatatatgtagtgcacccaaagttgaaaatcactaccgtat 25855438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 202 - 261
Target Start/End: Complemental strand, 18372095 - 18372036
Alignment:
Q  202 aggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccccagggacgccc 261  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||| ||| |||||||    
T  18372095 aggcccatccttgagggagccccagctcgtttgaactgtttgcacccctcagagacgccc 18372036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 8420424 - 8420366
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacc 122  Q
    |||||||||||| ||||||||||||||| |||||||||| ||||||||||| |||||||    
T  8420424 atgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgttgtacacc 8420366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 55 - 141
Target Start/End: Complemental strand, 26279649 - 26279563
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactac 141  Q
    |||||| | |||||||||||| ||||||||||||||| ||| |||||||||||||||||   |||||| | |||||||||| |||||    
T  26279649 aaaagaacaatgttctatttaaattttttaaaagataaatagaaggtgtcgtatatatgcaatacacccaaagatgaaaatcactac 26279563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 67 - 120
Target Start/End: Original strand, 23641329 - 23641382
Alignment:
Q  67 ttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtaca 120  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||| ||||||    
T  23641329 ttctatttatattttttaaaagataaatacaatgtgtcgtatatatgcggtaca 23641382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 64 - 140
Target Start/End: Original strand, 32319163 - 32319239
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgacta 140  Q
    |||||||||||| ||||||||||||||| |||||| |||| ||||||||| |||||||| | || ||||||| ||||    
T  32319163 atgttctatttaaattttttaaaagataaatacaaagtgttgtatatatgcggtacacccaaaggtgaaaattacta 32319239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 64 - 152
Target Start/End: Complemental strand, 49393187 - 49393100
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatga 152  Q
    ||||||| |||| ||||||||||||||| |||||||| ||||||||||||| ||||||| | || | ||||| |||||||||| |||||    
T  49393187 atgttctctttaaattttttaaaagataaatacaaggcgtcgtatatatgt-gtacacccaaaggtaaaaattactaccgtatacatga 49393100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 1148354 - 1148405
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||| ||||||||||| |||||||||||||||||||||||||| ||||||||    
T  1148354 ttgaagcccatccttgggggaggcccagctcgtttgagctgttcgcaccccc 1148405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 55 - 124
Target Start/End: Complemental strand, 42453511 - 42453442
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacaccta 124  Q
    |||||| | |||||| ||||| ||||||||||||||| |||||||||||| |||||||| | ||||||||    
T  42453511 aaaagaacaatgttcaatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacaccta 42453442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 29620618 - 29620662
Alignment:
Q  218 gaggcccagctcgtttgagctgtttgcaccccc-cagggacgccc 261  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  29620618 gaggcccagctcgtttgagctgtttgcaccccctcagggacgccc 29620662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 202 - 250
Target Start/End: Complemental strand, 48157005 - 48156957
Alignment:
Q  202 aggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    ||||||||  ||||||||||||||||||  |||||||||||||||||||    
T  48157005 aggcccatgattgagggaggcccagctctgttgagctgtttgcaccccc 48156957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 67 - 122
Target Start/End: Complemental strand, 790031 - 789976
Alignment:
Q  67 ttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacc 122  Q
    ||||||||| ||||||||||  ||| |||||||||||| ||||||||| |||||||    
T  790031 ttctatttaaattttttaaacaataaatacaaggtgtcatatatatgttgtacacc 789976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 9878919 - 9878970
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||  || |||||||||||||||  |||||||||||||||||||    
T  9878919 ttgaggcccatgattaagggaggcccagctctgttgagctgtttgcaccccc 9878970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 34290874 - 34290925
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    ||||||||||| | ||||||||||||| |||  |||||||||||||||||||    
T  34290874 ttgaggcccatgcctgagggaggcccaactctgttgagctgtttgcaccccc 34290925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 43207474 - 43207525
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||   |||||||||||||||||  |||||||||||||||||||    
T  43207474 ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccc 43207525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 44708348 - 44708297
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||   |||||||||||||||||  |||||||||||||||||||    
T  44708348 ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccc 44708297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 53507117 - 53507168
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||   |||||||||||||||||  |||||||||||||||||||    
T  53507117 ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccc 53507168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 55 - 122
Target Start/End: Original strand, 54574826 - 54574893
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacc 122  Q
    |||||| | |||||||||||| |||||| |||| ||| |||||||||  |||||||||| ||||||||    
T  54574826 aaaagaacaatgttctatttaaatttttcaaaatataaatacaaggtaccgtatatatgcggtacacc 54574893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 199 - 245
Target Start/End: Original strand, 8074087 - 8074133
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgca 245  Q
    ||||||||||||||||  |||||||||||||| ||||| ||||||||    
T  8074087 ttgaggcccatccttggaggaggcccagctcgattgagttgtttgca 8074133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 28689369 - 28689418
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    |||||||||||| |||||  |||||||| |||||||||| ||||||||||    
T  28689369 atgttctatttaaattttcaaaaagataaatacaaggtgccgtatatatg 28689418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 115 - 175
Target Start/End: Complemental strand, 48157186 - 48157126
Alignment:
Q  115 ggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaa 175  Q
    |||||||| | || ||||||||||||| |||| ||||| |||||||||| ||||| |||||    
T  48157186 ggtacacccaaaggtgaaaatgactactgtatacatgaggaacccccacttaacatcaaaa 48157126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 50939468 - 50939516
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacc 247  Q
    |||||||||||   |||||||||||||||||  ||||||||||||||||    
T  50939468 ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacc 50939516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 165; Significance: 5e-88; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 1105682 - 1105446
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    ||||||||||| || ||||||||||||| ||||        ||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  1105682 atgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagtgatgttctatttatattttttaaaagataaatacaaggtatcgtatatatg 1105583  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatcctt 213  Q
     ||||||||||||| |||||||||||||| ||| |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1105582 cggtacacctagaggtgaaaatgactaccatatacatgagcaacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatcctt 1105483  T
Q  214 gagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||||||||||||||||||||||||||||    
T  1105482 gagggaggcccagctcgtttgagctgtttgcaccccc 1105446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 56 - 261
Target Start/End: Complemental strand, 37514767 - 37514561
Alignment:
Q  56 aaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatga 155  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||  |||| |||||||||||||||||| ||||| ||    
T  37514767 aaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacactcagaggtgaaaatgactaccgtatacatgaaga 37514668  T
Q  156 acccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagg 254  Q
    | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||    
T  37514667 atccccacctaacaccaaaatcaatcatgagaaacccccactcttgaggcccatccttggaggaggcccagctcgtttgagctgtttgcaccccctcagg 37514568  T
Q  255 gacgccc 261  Q
    |||||||    
T  37514567 gacgccc 37514561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 57 - 250
Target Start/End: Original strand, 5128842 - 5129034
Alignment:
Q  57 aagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaa 156  Q
    ||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||  || |||| |||| |||||||||||||||||| ||||| |||    
T  5128842 aagagcgatattctatttatattttttaaaagataaatacaaggtgccgtatatatgcagtgcacccagaggtgaaaatgactaccgtatacatgaggaa 5128941  T
Q  157 cccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    || |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  5128942 cctccacctaacaccaaaatcaatcatgaggaa-ccccactcttgaggcctatccttgagggaggcccagctcgtttgagctgtttgcaccccc 5129034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 55 - 261
Target Start/End: Complemental strand, 32915494 - 32915300
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||| | ||||||| |||||||| ||||| |    
T  32915494 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgtggtacacccagaggtaaaaatgattaccgtatacatgagg 32915395  T
Q  155 aacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cag 253  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||             |||||||||||| |||||||||||||||||||||||| |||    
T  32915394 aacccccacctaacaccaaaatcaatcatgagggacccccactctt-------------gagggaggcccaactcgtttgagctgtttgcaccccctcag 32915308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 55 - 179
Target Start/End: Complemental strand, 10979009 - 10978885
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| |||  |||||||||||||||||| ||||| |    
T  10979009 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccagaagtgaaaatgactaccgtatacatgagg 10978910  T
Q  155 aacccccacctaacaccaaaatcaa 179  Q
    |||||||||||||||||||||||||    
T  10978909 aacccccacctaacaccaaaatcaa 10978885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 38209590 - 38209713
Alignment:
Q  56 aaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatga 155  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| |||| |||||||||||||||||| ||||| ||    
T  38209590 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagga 38209689  T
Q  156 acccccacctaacaccaaaatcaa 179  Q
    ||||||||||||||||||||||||    
T  38209690 acccccacctaacaccaaaatcaa 38209713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 14 - 179
Target Start/End: Complemental strand, 47129137 - 47128972
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    |||||||||||||| |||||||||||||  |||        |||||| | |||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  47129137 atgaaaagaggccagtgataaaatcaaaatgtattttttttaaaagaacaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatg 47129038  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaatcaa 179  Q
     |||||||| |||| | |||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  47129037 cggtacacccagaggtaaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaa 47128972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 14 - 175
Target Start/End: Complemental strand, 34027729 - 34027568
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    |||||||||||||| ||||||||||||| ||||        |||| ||| |||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  34027729 atgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaaagcaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatg 34027630  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaa 175  Q
     |||||||| | || ||||||||||||| |||| ||||| ||||||||||||||||||||||    
T  34027629 cggtacacccaaaggtgaaaatgactacggtatacatgaggaacccccacctaacaccaaaa 34027568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 34768531 - 34768696
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    |||||||||||| | ||||||||||||| | ||        |||||||| |||||||||||||||||||||||||||| ||| |||||| ||||||||||    
T  34768531 atgaaaagaggctagtgataaaatcaaaacatattttttttaaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatg 34768630  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaatcaa 179  Q
     |||||||| |||| ||||||||| |||||||| ||||| ||||||||||||||||||||||||||    
T  34768631 cggtacacccagaggtgaaaatgattaccgtatacatgaggaacccccacctaacaccaaaatcaa 34768696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 14 - 171
Target Start/End: Original strand, 43455488 - 43455645
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    ||||||||||| || ||||||||||||| ||||        |||||||| |||||||||||||||||||||||||||| ||| |||||| ||||||||||    
T  43455488 atgaaaagaggtcagtgataaaatcaaaacgtattatttttaaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatg 43455587  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacacc 171  Q
     |||||||| | || |||||||||||||||||| ||||| ||||||||||||||||||    
T  43455588 cggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacacc 43455645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 55 - 179
Target Start/End: Complemental strand, 48209349 - 48209225
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| |||  |||| ||||||||||||| |||||      
T  48209349 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagatgtgaatatgactaccgtatacatgaga 48209250  T
Q  155 aacccccacctaacaccaaaatcaa 179  Q
    |||||||||||||||||||||||||    
T  48209249 aacccccacctaacaccaaaatcaa 48209225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 54780886 - 54780771
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| | || |||||||||||||||||| ||||| |    
T  54780886 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 54780787  T
Q  155 aacccccacctaacac 170  Q
    ||||||||||||||||    
T  54780786 aacccccacctaacac 54780771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 65 - 179
Target Start/End: Complemental strand, 13460306 - 13460192
Alignment:
Q  65 tgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacc 164  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||| |||  |||||||||||||||||| ||| | |||||||||||    
T  13460306 tgttctatttatattttttaaaagataaatacaaggtgtcgtatatatgcggtatacccagatgtgaaaatgactaccgtatacataaggaacccccacc 13460207  T
Q  165 taacaccaaaatcaa 179  Q
    |||||||||||||||    
T  13460206 taacaccaaaatcaa 13460192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 55 - 175
Target Start/End: Complemental strand, 32128693 - 32128573
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||||| |||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||| | || |||||||||||||||||| ||| |      
T  32128693 aaaagagcaatgttctatttatattttttaaaagataaatataaggtgtcgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacataaga 32128594  T
Q  155 aacccccacctaacaccaaaa 175  Q
    |||||||||||||||||||||    
T  32128593 aacccccacctaacaccaaaa 32128573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 55 - 175
Target Start/End: Complemental strand, 16845131 - 16845010
Alignment:
Q  55 aaaagagcgatgttctatttatatttttt-aaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgat 153  Q
    |||||||| |||||||||||||||||||| |||||||| ||| |||||||||||||||||| ||||||| |  | |||||||||||||||||| |||||     
T  16845131 aaaagagcaatgttctatttatatttttttaaaagataaatataaggtgtcgtatatatgtagtacacccaacggtgaaaatgactaccgtatacatgag 16845032  T
Q  154 gaacccccacctaacaccaaaa 175  Q
    ||||||||||||||||||||||    
T  16845031 gaacccccacctaacaccaaaa 16845010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 14 - 175
Target Start/End: Complemental strand, 19498652 - 19498493
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    ||||||| |||||||||||||||||||| ||||        |||||||| |||||||||||||||||||||||||||| ||| |||||| ||  ||||||    
T  19498652 atgaaaacaggccaatgataaaatcaaaacgtattttgtttaaaagagcaatgttctatttatattttttaaaagataaatataaggtgccg--tatatg 19498555  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaa 175  Q
     |||||| | | || ||||||||||||| |||| ||||| ||||||||||||||||||||||    
T  19498554 cggtacagccaaaggtgaaaatgactactgtatacatgaggaacccccacctaacaccaaaa 19498493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 14 - 175
Target Start/End: Original strand, 54083199 - 54083360
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    ||||||||||| || ||||||||||||| ||||        |||| | | ||| |||||||||||||||||||||||| ||| |||||| ||||||||||    
T  54083199 atgaaaagaggtcagtgataaaatcaaaacgtatttttttaaaaaaaacaatgatctatttatattttttaaaagataaatataaggtgccgtatatatg 54083298  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaa 175  Q
     |||||||| | |||| |||||||||||||||| ||||| ||||||| ||||||||||||||    
T  54083299 cggtacacccaaagataaaaatgactaccgtatacatgaggaacccctacctaacaccaaaa 54083360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 64 - 175
Target Start/End: Original strand, 37777230 - 37777341
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccac 163  Q
    |||||||||||||||||||||||||||| ||| |||||| |||||||||| |||||||| | || |||||||||||||||||| ||||| |||||| ||     
T  37777230 atgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaaccctcaa 37777329  T
Q  164 ctaacaccaaaa 175  Q
    ||||||||||||    
T  37777330 ctaacaccaaaa 37777341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 55 - 167
Target Start/End: Original strand, 2790739 - 2790851
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||| | |||||||||||||||||||||||||||| ||| |||||  |||||||||| |||||||| | || |||||||||||||||||| ||||| |    
T  2790739 aaaagaacaatgttctatttatattttttaaaagataaatataaggtaccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgagg 2790838  T
Q  155 aacccccacctaa 167  Q
    |||||||||||||    
T  2790839 aacccccacctaa 2790851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 35779325 - 35779443
Alignment:
Q  56 aaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatga 155  Q
    ||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||| |||||||| | || ||||||||| |||||||| ||||| ||    
T  35779325 aaagagcaatgttctatt-atattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaggtgaaaatgattaccgtatacatgagga 35779423  T
Q  156 acccccacctaacaccaaaa 175  Q
    |||  ||||||||| |||||    
T  35779424 accttcacctaacatcaaaa 35779443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 64 - 179
Target Start/End: Original strand, 10428204 - 10428327
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagag--------atgaaaatgactaccgtatgcatgatga 155  Q
    |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| ||||         |||||||||||||||||| ||||| ||    
T  10428204 atgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaattgtgaaaatgactaccgtatacatgagga 10428303  T
Q  156 acccccacctaacaccaaaatcaa 179  Q
    ||| ||||||||||||||||||||    
T  10428304 acctccacctaacaccaaaatcaa 10428327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 199 - 270
Target Start/End: Original strand, 10431442 - 10431514
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagggacgcccttgcatata 270  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  10431442 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcagggacgcccctgcatata 10431514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 14 - 175
Target Start/End: Complemental strand, 35465256 - 35465096
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    ||||||||||| || ||||||||||||| | ||        |||||| | ||||| ||||||||||||||| |||||| ||| |||||| ||||||||||    
T  35465256 atgaaaagaggtcagtgataaaatcaaaacatattttttttaaaagaacaatgttatatttatattttttacaagataaataaaaggtg-cgtatatatg 35465158  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaa 175  Q
     |||||||||| |  ||||||| |||||||||| ||||| ||| ||||||||||||||||||    
T  35465157 cggtacacctaaaagtgaaaataactaccgtatacatgaggaatccccacctaacaccaaaa 35465096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 70 - 175
Target Start/End: Complemental strand, 40089609 - 40089505
Alignment:
Q  70 tatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaaca 169  Q
    ||||||||||||| |||||||| ||| |||||| |||||||||| |||||| | | || |||||||||||||||||| ||||| ||||||||||||||||    
T  40089609 tatttatattttt-aaaagataaatataaggtgccgtatatatgcggtacatccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaaca 40089511  T
Q  170 ccaaaa 175  Q
    ||||||    
T  40089510 ccaaaa 40089505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 64 - 152
Target Start/End: Original strand, 36118465 - 36118553
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatga 152  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||| | | |||||||| |||||||||| |||||    
T  36118465 atgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacacccaaatatgaaaatcactaccgtatacatga 36118553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 64 - 175
Target Start/End: Original strand, 16882402 - 16882513
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccac 163  Q
    |||||||||||||| ||||||||||||| ||| |||||| ||| |||||  |||||||| | || ||||||||||||||||||| |||  |||||| |||    
T  16882402 atgttctatttatactttttaaaagataaatataaggtgccgtgtatatacggtacaccaaaaggtgaaaatgactaccgtatgtatggggaaccctcac 16882501  T
Q  164 ctaacaccaaaa 175  Q
    ||||||||||||    
T  16882502 ctaacaccaaaa 16882513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 17679550 - 17679432
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    |||||||||| ||| ||||||||||||| ||||        |||||||| || ||||||||||||||||||||||||| |||||||||| ||||||||||    
T  17679550 atgaaaagagaccagtgataaaatcaaaacgtattttttttaaaagagcaatattctatttatattttttaaaagataaatacaaggtgccgtatatatg 17679451  T
Q  114 tggtacacctagagatgaa 132  Q
     |||||||| |||| ||||    
T  17679450 cggtacacccagaggtgaa 17679432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 105 - 179
Target Start/End: Original strand, 23509846 - 23509920
Alignment:
Q  105 gtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaatcaa 179  Q
    ||||||||| ||||||||||||| |||||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  23509846 gtatatatgcggtacacctagaggtgaaaatgactaccgtagacatgaggaacccccacctaacaccaaaatcaa 23509920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 200 - 261
Target Start/End: Complemental strand, 55255145 - 55255083
Alignment:
Q  200 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagggacgccc 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  55255145 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcagggacgccc 55255083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 199 - 261
Target Start/End: Complemental strand, 17679283 - 17679220
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagggacgccc 261  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  17679283 ttgaggcccatccttgagggaggctcagctcgtttgagctgtttgcaccccctcagggacgccc 17679220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 199 - 261
Target Start/End: Complemental strand, 47128047 - 47127984
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagggacgccc 261  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  47128047 ttgaggcccatccttgagggaggcccagctcgtttgggctgtttgcaccccctcagggacgccc 47127984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 136
Target Start/End: Complemental strand, 51964861 - 51964736
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatatttttt---aaaagatatatacaaggtgtcgtatat 110  Q
    ||||||||||||| |||||||||||||| ||||        |||||||| ||||||||||||||||||||   |||||||| |||||||||| |||||||    
T  51964861 atgaaaagaggccgatgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatattttttttaaaaagataaatacaaggtgccgtatat 51964762  T
Q  111 atgtggtacacctagagatgaaaatg 136  Q
    ||| | |||||| |||| ||||||||    
T  51964761 atgcgatacacccagaggtgaaaatg 51964736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 55 - 158
Target Start/End: Complemental strand, 52468395 - 52468292
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||| | |||||||||||| ||||||||||||||| |||||||||| |||||||||||  |||| | | || ||||||| |||||||||||||||| |    
T  52468395 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgttatacatccaaaggtgaaaatcactaccgtatgcatgagg 52468296  T
Q  155 aacc 158  Q
    ||||    
T  52468295 aacc 52468292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 200 - 249
Target Start/End: Original strand, 38209842 - 38209891
Alignment:
Q  200 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38209842 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 38209891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 199 - 270
Target Start/End: Original strand, 45560704 - 45560776
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagggacgcccttgcatata 270  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||||||| || |||||    
T  45560704 ttgaggcccatctttgagggaggcccagctcgtttgagctgtttgcaccccctcaaggacgcccctgaatata 45560776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 48208516 - 48208465
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  48208516 ttgaggcccatccttgagggaggcccaactcgtttgagctgtttgcaccccc 48208465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 55 - 122
Target Start/End: Original strand, 51691913 - 51691980
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacc 122  Q
    |||||||| |||||||||||| ||||||||||||||| |||||||||| |||||||||| ||||||||    
T  51691913 aaaagagcaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgcggtacacc 51691980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 55 - 179
Target Start/End: Complemental strand, 55255366 - 55255254
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||||| |||||| ||||||||||||||||||||| |||||||||| ||             |||| |||| |||||||||||||||||| ||||| |    
T  55255366 aaaagagcaatgttccatttatattttttaaaagataaatacaaggtgccgc------------cacccagaggtgaaaatgactaccgtatacatgagg 55255279  T
Q  155 aacccccacctaacaccaaaatcaa 179  Q
    |||||||||||||||||||||||||    
T  55255278 aacccccacctaacaccaaaatcaa 55255254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 9579469 - 9579531
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccccagggacgccc 261  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||    
T  9579469 ttgaagcccatccttgagggaggcccagctcgtttgagctgtttgcacgcctcagggatgccc 9579531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 199 - 261
Target Start/End: Original strand, 9585164 - 9585226
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccccagggacgccc 261  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| || |||||| ||||    
T  9585164 ttgaagcccatccttgagggaggcccagctcgtttgagctgtttgcacgcctcagggatgccc 9585226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 55 - 135
Target Start/End: Original strand, 39329390 - 39329470
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaat 135  Q
    |||||| | ||||||| |||| ||||||||||||||| ||||||||||| ||||||||||| |||||| | ||||||||||    
T  39329390 aaaagaacaatgttctctttaaattttttaaaagataaatacaaggtgttgtatatatgtgatacacccaaagatgaaaat 39329470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 13459850 - 13459799
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  13459850 ttgaggcccatccttaagggaggctcagctcgtttgagctgtttgcaccccc 13459799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 199 - 262
Target Start/End: Original strand, 34769533 - 34769596
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccccagggacgccct 262  Q
    ||||||||||||||||||||||||||| |||||||||||| |||||||||| |||  |||||||    
T  34769533 ttgaggcccatccttgagggaggcccaactcgtttgagctatttgcacccctcagaaacgccct 34769596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 55 - 113
Target Start/End: Original strand, 16922327 - 16922385
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    |||||||| |||||||||||||||||||||||||||| ||| || ||||||||||||||    
T  16922327 aaaagagcaatgttctatttatattttttaaaagataaatataaagtgtcgtatatatg 16922385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 175
Target Start/End: Complemental strand, 24969536 - 24969426
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||| ||| ||| |||||||||||||||||||||||| ||| |||||| ||          ||||||| | || |||||||||||||||||| ||||| |    
T  24969536 aaaaaagcaatgatctatttatattttttaaaagataaatataaggtggcg----------gtacacccaaaggtgaaaatgactaccgtatacatgagg 24969447  T
Q  155 aacccccacctaacaccaaaa 175  Q
    |||||||||||||||||||||    
T  24969446 aacccccacctaacaccaaaa 24969426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 64 - 152
Target Start/End: Complemental strand, 36178772 - 36178684
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatga 152  Q
    |||||||||||| ||| ||||||||||| ||||||||||||||||||||| | |||||| | |  ||||||| |||||| ||| |||||    
T  36178772 atgttctatttaaattatttaaaagataaatacaaggtgtcgtatatatgcgatacacccaaatgtgaaaatcactaccttatacatga 36178684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 55 - 146
Target Start/End: Original strand, 10041998 - 10042089
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtat 146  Q
    |||||| | |||||||||||| |||||| |||| ||| |||||||||| ||||| |||||| |||||||| |  ||||||| ||||||||||    
T  10041998 aaaagaacaatgttctatttaaatttttaaaaaaataaatacaaggtgccgtatgtatgtgatacacctaaatgtgaaaatcactaccgtat 10042089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 27596639 - 27596690
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||||| | |||||||||||||||||||||||||| ||||||||    
T  27596639 ttgaggcccatcctcgggggaggcccagctcgtttgagctgttcgcaccccc 27596690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 67 - 113
Target Start/End: Original strand, 2135331 - 2135377
Alignment:
Q  67 ttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||    
T  2135331 ttctatttaaattttttaaaagataaatacaaggtgtcgtatatatg 2135377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 76 - 158
Target Start/End: Original strand, 4167910 - 4167992
Alignment:
Q  76 tattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacc 158  Q
    |||||||||||||||| |||||||||| |||||||||| | |||||| | || ||||||| |||||| ||| ||||| |||||    
T  4167910 tattttttaaaagataaatacaaggtgccgtatatatgcgatacacccaaaggtgaaaatcactaccttatacatgaggaacc 4167992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 55 - 101
Target Start/End: Original strand, 9578662 - 9578708
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggt 101  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||    
T  9578662 aaaagagcaatgttctatttatattttttaaaagataaatacaaggt 9578708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 64 - 158
Target Start/End: Complemental strand, 27112130 - 27112036
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacc 158  Q
    |||||| ||||| ||||||||||||||| |||||||||| | |||||||| | |||||| | |  ||||||| |||||||||| ||||| |||||    
T  27112130 atgttcaatttaaattttttaaaagataaatacaaggtgacatatatatgcgatacaccaaaatgtgaaaatcactaccgtatacatgaggaacc 27112036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 110
Target Start/End: Original strand, 23508512 - 23508564
Alignment:
Q  59 gagcgatgttctatttata-ttttttaaaagatatatacaaggtgtcgtatat 110  Q
    |||| |||||||||||||| |||||||||||||| ||||||||||||||||||    
T  23508512 gagcaatgttctatttataattttttaaaagataaatacaaggtgtcgtatat 23508564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 115 - 175
Target Start/End: Original strand, 38352313 - 38352373
Alignment:
Q  115 ggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaa 175  Q
    |||||||| | || |||||||||||||||| | ||||| ||||||||||||||||||||||    
T  38352313 ggtacacccaaaggtgaaaatgactaccgtgtacatgaggaacccccacctaacaccaaaa 38352373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 35780556 - 35780607
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||| |||| || ||||||||||||||| |||||||||||||||||||    
T  35780556 ttgaggcctatccgtgggggaggcccagctcggttgagctgtttgcaccccc 35780607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 69 - 135
Target Start/End: Complemental strand, 40217327 - 40217261
Alignment:
Q  69 ctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaat 135  Q
    ||||||| ||||||||||||||| ||| ||||||||||||||||| | |||| | | ||||||||||    
T  40217327 ctatttaaattttttaaaagataaatataaggtgtcgtatatatgcgatacatccaaagatgaaaat 40217261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 221 - 273
Target Start/End: Original strand, 23510922 - 23510975
Alignment:
Q  221 gcccagctcgtttgagctgtttgcaccccc-cagggacgcccttgcatataata 273  Q
    |||||| ||||||||||||||||||||||| |||||||||||||| || |||||    
T  23510922 gcccagttcgtttgagctgtttgcaccccctcagggacgcccttgaatctaata 23510975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 70 - 158
Target Start/End: Complemental strand, 24397028 - 24396940
Alignment:
Q  70 tatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacc 158  Q
    |||||| ||||||||||||||| ||| ||||||  ||||||||||| |||||  | || ||||||| |||| ||||| ||||| |||||    
T  24397028 tatttaaattttttaaaagataaatataaggtgcagtatatatgtgatacactcaaaggtgaaaatcactatcgtatacatgaggaacc 24396940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 135
Target Start/End: Original strand, 39655252 - 39655332
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaat 135  Q
    |||||| | |||||||||||| ||||||||||||||| |||||| ||  || ||||||| |||||||| | || |||||||    
T  39655252 aaaagaacaatgttctatttaaattttttaaaagataaatacaaagttccgcatatatgcggtacacccaaaggtgaaaat 39655332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 206 - 246
Target Start/End: Complemental strand, 54779500 - 54779460
Alignment:
Q  206 ccatccttgagggaggcccagctcgtttgagctgtttgcac 246  Q
    ||||||||| ||||||||||||||| |||||||||||||||    
T  54779500 ccatccttgggggaggcccagctcggttgagctgtttgcac 54779460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 112
Target Start/End: Complemental strand, 15735189 - 15735142
Alignment:
Q  65 tgttctatttatattttttaaaagatatatacaaggtgtcgtatatat 112  Q
    ||||||||||| ||||||||||||||| |||||||  |||||||||||    
T  15735189 tgttctatttaaattttttaaaagataaatacaagacgtcgtatatat 15735142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 16844893 - 16844842
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||   |||||||||||||||||  |||||||||||||||||||    
T  16844893 ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccc 16844842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 24969308 - 24969257
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||   |||||||||||||||||  |||||||||||||||||||    
T  24969308 ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccc 24969257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 146
Target Start/End: Original strand, 37744916 - 37744999
Alignment:
Q  64 atgttctatttatatttt-ttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtat 146  Q
    |||||||||||| ||||| |||||||||| ||| ||||||||| ||||||| | |||| | | || ||||||| ||||||||||    
T  37744916 atgttctatttaaatttttttaaaagataaatataaggtgtcgcatatatgcgatacatccaaaggtgaaaatcactaccgtat 37744999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 37777459 - 37777510
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||  |||||||||| |||||||  |||||||||||||||||||    
T  37777459 ttgaggcccatgattgagggaggtccagctctgttgagctgtttgcaccccc 37777510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 199 - 229
Target Start/End: Original strand, 23510887 - 23510917
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctc 229  Q
    |||||||||||||||||||||||||||||||    
T  23510887 ttgaggcccatccttgagggaggcccagctc 23510917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 199 - 249
Target Start/End: Complemental strand, 40089390 - 40089340
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccc 249  Q
    |||||||||||   |||||||||||||||||  ||||||||||||||||||    
T  40089390 ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcacccc 40089340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 250
Target Start/End: Complemental strand, 32128444 - 32128407
Alignment:
Q  213 tgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||||||||  |||||||||||||||||||    
T  32128444 tgagggaggcccagctctgttgagctgtttgcaccccc 32128407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 113
Target Start/End: Complemental strand, 45656275 - 45656226
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    ||||| |||||| ||||||||||||||| || ||||||||| ||||||||    
T  45656275 atgttttatttaaattttttaaaagataaatgcaaggtgtcatatatatg 45656226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 218 - 261
Target Start/End: Complemental strand, 10978191 - 10978147
Alignment:
Q  218 gaggcccagctcgtttgagctgtttgcaccc-cccagggacgccc 261  Q
    ||||| ||||||||||||||||||||||||| | |||||||||||    
T  10978191 gaggcgcagctcgtttgagctgtttgcaccctctcagggacgccc 10978147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 255
Target Start/End: Original strand, 38352489 - 38352545
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccccaggg 255  Q
    |||||||||||   | |||||||||||||||  |||||||||||||||||| |||||    
T  38352489 ttgaggcccatgactaagggaggcccagctctgttgagctgtttgcacccctcaggg 38352545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 235
Target Start/End: Complemental strand, 51964240 - 51964204
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttga 235  Q
    ||||||||||||||||||||||||| |||| ||||||    
T  51964240 ttgaggcccatccttgagggaggcctagcttgtttga 51964204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 258
Target Start/End: Original strand, 54083478 - 54083538
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagggacg 258  Q
    |||||||||||   ||||||| |||||||||  ||||||||||||||||||| ||||||||    
T  54083478 ttgaggcccatgactgagggatgcccagctctattgagctgtttgcaccccctcagggacg 54083538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 159; Significance: 2e-84; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 56 - 250
Target Start/End: Complemental strand, 3953108 - 3952914
Alignment:
Q  56 aaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatga 155  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||| |||||| ||| |||||||| |||| ||||||||| |||||||||||||| ||    
T  3953108 aaagaccgatgttctatttatattttttaaaagataaatacaaggtgccgtatacatgcggtacacccagaggtgaaaatgattaccgtatgcatgagga 3953009  T
Q  156 acccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3953008 acccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 3952914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 55 - 261
Target Start/End: Complemental strand, 7162887 - 7162680
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||| ||  |||| ||||||||||||||||||  |||| |    
T  7162887 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtatactcagaggtgaaaatgactaccgtatatatgagg 7162788  T
Q  155 aacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cag 253  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  7162787 aacccctacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgtgggaggcccagctcgtttgagctgtttgcaccccctcag 7162688  T
Q  254 ggacgccc 261  Q
    ||||||||    
T  7162687 ggacgccc 7162680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 55 - 179
Target Start/End: Complemental strand, 3155320 - 3155196
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||| |||||||||||||||||| ||||| |    
T  3155320 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagaggtgaaaatgactaccgtatacatgagg 3155221  T
Q  155 aacccccacctaacaccaaaatcaa 179  Q
    |||||||||||||||||||||||||    
T  3155220 aacccccacctaacaccaaaatcaa 3155196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 55 - 179
Target Start/End: Original strand, 12337447 - 12337571
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| |||| |||||||||||||||||| ||||| |    
T  12337447 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcatatatatgtggtacacccagaggtgaaaatgactaccgtatacatgagg 12337546  T
Q  155 aacccccacctaacaccaaaatcaa 179  Q
    |||||||||||||||||||||||||    
T  12337547 aacccccacctaacaccaaaatcaa 12337571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 55 - 179
Target Start/End: Complemental strand, 4505997 - 4505873
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| |||| | |||||||||||||||| ||||| |    
T  4505997 aaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgagg 4505898  T
Q  155 aacccccacctaacaccaaaatcaa 179  Q
    |||||||||||||||||||||||||    
T  4505897 aacccccacctaacaccaaaatcaa 4505873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 55 - 179
Target Start/End: Complemental strand, 6965110 - 6964986
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||||| |||||||||||||||||||||||||||| |||||| ||| |||||||||| |||||||| |||| |||||||||||||||||| ||||| |    
T  6965110 aaaagagcaatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 6965011  T
Q  155 aacccccacctaacaccaaaatcaa 179  Q
    |||||||||||||||||||||||||    
T  6965010 aacccccacctaacaccaaaatcaa 6964986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 17 - 175
Target Start/End: Original strand, 29939823 - 29939981
Alignment:
Q  17 aaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtgg 116  Q
    |||||||| || ||||||||||||| ||||        |||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||| ||    
T  29939823 aaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatattttttacaagataaatacaaggtgtcgtatatatgcgg 29939922  T
Q  117 tacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaa 175  Q
    |||||| | || |||||||||||||||||| ||||| ||||| ||||||||||||||||    
T  29939923 tacacccaaaggtgaaaatgactaccgtatacatgaggaaccaccacctaacaccaaaa 29939981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 56 - 174
Target Start/End: Original strand, 10762565 - 10762683
Alignment:
Q  56 aaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatga 155  Q
    ||||||| |||||||||||||||||||||||||||| ||| ||||||  |||||||||||||||||| | || |||||||||||||||||| ||||| ||    
T  10762565 aaagagcaatgttctatttatattttttaaaagataaatataaggtgcggtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgagga 10762664  T
Q  156 acccccacctaacaccaaa 174  Q
    |||||||||||||||||||    
T  10762665 acccccacctaacaccaaa 10762683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 55 - 179
Target Start/End: Original strand, 8907078 - 8907202
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||||  |||||||||||||||||||||||||||| |||||||| | |||||||||| |||||||| |||| | |||||||||||||||| |||||      
T  8907078 aaaagagtaatgttctatttatattttttaaaagataaatacaaggcgccgtatatatgcggtacacccagaggtaaaaatgactaccgtatacatgaga 8907177  T
Q  155 aacccccacctaacaccaaaatcaa 179  Q
    |||||||||||||||||||||||||    
T  8907178 aacccccacctaacaccaaaatcaa 8907202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 14 - 175
Target Start/End: Original strand, 27506698 - 27506859
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    |||||||||||||| ||||||||||||| ||||        |||| ||| ||| |||||||||||||||||||||||| ||| |||||| ||||||||||    
T  27506698 atgaaaagaggccagtgataaaatcaaaacgtattttttaaaaaaaagcaatgatctatttatattttttaaaagataaatataaggtgccgtatatatg 27506797  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaa 175  Q
    ||||||||| | || | ||||||||||| |||| ||||| |||| |||||||||||||||||    
T  27506798 tggtacacccaaaggtaaaaatgactactgtatacatgaggaactcccacctaacaccaaaa 27506859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 17 - 175
Target Start/End: Complemental strand, 9046171 - 9046012
Alignment:
Q  17 aaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatatttttt-aaaagatatatacaaggtgtcgtatatatgtg 115  Q
    ||||||||||| ||||||||||||| ||||        |||||| | |||||||||||||||||||| |||||||| ||| |||||| |||||||||| |    
T  9046171 aaaagaggccagtgataaaatcaaaacgtattgtttttaaaagaacaatgttctatttatatttttttaaaagataaatataaggtgccgtatatatgcg 9046072  T
Q  116 gtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaa 175  Q
    ||||||| | || |||||||||||||||||| ||||| ||||||||||||||||| ||||    
T  9046071 gtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacacaaaaa 9046012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 64 - 175
Target Start/End: Complemental strand, 24410531 - 24410419
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaa-ccccca 162  Q
    |||||||||||||||||||||||||||| ||| |||||| |||||||||| |||||||| | || |||||||||||||||||| ||||| ||| ||||||    
T  24410531 atgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccca 24410432  T
Q  163 cctaacaccaaaa 175  Q
    |||||||||||||    
T  24410431 cctaacaccaaaa 24410419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 14 - 142
Target Start/End: Complemental strand, 34694119 - 34693991
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    |||||||||||||  ||||||||||||| ||||        |||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  34694119 atgaaaagaggcccgtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatg 34694020  T
Q  114 tggtacacctagagatgaaaatgactacc 142  Q
    ||||||||| |||| | ||||||||||||    
T  34694019 tggtacacccagaggtcaaaatgactacc 34693991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 14 - 142
Target Start/End: Complemental strand, 34716531 - 34716403
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    |||||||||||||  ||||||||||||| ||||        |||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  34716531 atgaaaagaggcccgtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatg 34716432  T
Q  114 tggtacacctagagatgaaaatgactacc 142  Q
    ||||||||| |||| | ||||||||||||    
T  34716431 tggtacacccagaggtcaaaatgactacc 34716403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 55 - 175
Target Start/End: Complemental strand, 26716232 - 26716111
Alignment:
Q  55 aaaagagcgatgttctatttatatttttt-aaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgat 153  Q
    |||||||| |||||||||||||||||||| |||||||| ||| |||||| | |||||||| |||||||| | || |||||||||||||||||| |||||     
T  26716232 aaaagagcaatgttctatttatatttttttaaaagataaatataaggtgccatatatatgcggtacacccaaaggtgaaaatgactaccgtatacatgag 26716133  T
Q  154 gaacccccacctaacaccaaaa 175  Q
    ||||||||||||||||| ||||    
T  26716132 gaacccccacctaacacaaaaa 26716111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 14 - 132
Target Start/End: Complemental strand, 40636282 - 40636164
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    |||||||||||||| ||||||||||||| | ||        |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  40636282 atgaaaagaggccagtgataaaatcaaaacatattttttttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgtcgtatatatg 40636183  T
Q  114 tggtacacctagagatgaa 132  Q
     |||||||| |||| ||||    
T  40636182 cggtacacccagaggtgaa 40636164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 199 - 270
Target Start/End: Original strand, 12337689 - 12337761
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagggacgcccttgcatata 270  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  12337689 ttgaggcccatccttgagggaggctcagctcgtttgagctgtttgcaccccctcagggacgcccctgcatata 12337761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 200 - 261
Target Start/End: Complemental strand, 3155068 - 3155006
Alignment:
Q  200 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagggacgccc 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  3155068 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcagggacgccc 3155006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 200 - 261
Target Start/End: Complemental strand, 6964857 - 6964795
Alignment:
Q  200 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagggacgccc 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6964857 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcagggacgccc 6964795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 5952675 - 5952791
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    |||||||||||||||||||||||||||| ||||        |||||||| ||||| |||||||  ||||||||||||| |||||||||| ||||||||||    
T  5952675 atgaaaagaggccaatgataaaatcaaaacgtattttttttaaaagagcaatgttatatttat--tttttaaaagataaatacaaggtgccgtatatatg 5952772  T
Q  114 tggtacacctagagatgaa 132  Q
     |||||||| |||| ||||    
T  5952773 cggtacacccagaggtgaa 5952791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 200 - 261
Target Start/End: Complemental strand, 4505744 - 4505682
Alignment:
Q  200 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagggacgccc 261  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  4505744 tgaggcccatcattgagggaggcccagctcgtttgagctgtttgcaccccctcagggacgccc 4505682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 67 - 141
Target Start/End: Original strand, 16227379 - 16227453
Alignment:
Q  67 ttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactac 141  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||| | |||||||||| |||||    
T  16227379 ttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgtgatacaccgatagatgaaaatcactac 16227453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 200 - 261
Target Start/End: Complemental strand, 34693212 - 34693150
Alignment:
Q  200 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagggacgccc 261  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  34693212 tgaggcccatccttgagggaggcccaactcgtttgagctgtttgcaccccctcagggacgccc 34693150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 200 - 261
Target Start/End: Complemental strand, 34715624 - 34715562
Alignment:
Q  200 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagggacgccc 261  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  34715624 tgaggcccatccttgagggaggcccaactcgtttgagctgtttgcaccccctcagggacgccc 34715562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 55 - 158
Target Start/End: Complemental strand, 16097111 - 16097008
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||| | |||||||||||| ||||||||||||||| |||||||||| ||||||||||  ||||||| | || ||||||| |||||| ||| ||||| |    
T  16097111 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgccgtatatatgatgtacacccaaaggtgaaaattactaccttatacatgagg 16097012  T
Q  155 aacc 158  Q
    ||||    
T  16097011 aacc 16097008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 55 - 158
Target Start/End: Original strand, 21665699 - 21665802
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||| | |||||||||||| ||||||||||||||| ||||| ||||||||||||||||| |||| | | |  ||||||| |||||||||| ||||| |    
T  21665699 aaaagaacaatgttctatttaaattttttaaaagataaatacacggtgtcgtatatatgtgatacatcaaaatgtgaaaatcactaccgtatacatgagg 21665798  T
Q  155 aacc 158  Q
    ||||    
T  21665799 aacc 21665802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 24035544 - 24035641
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatga 152  Q
    |||||| | |||||||||||| ||||||||||||||| |||||||||| |||||| ||| | |||||||| || ||||||| ||||||| || |||||    
T  24035544 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgccgtataaatgcgatacacctaaaggtgaaaatcactaccgcatacatga 24035641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 40636028 - 40635977
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||    
T  40636028 ttgaagcccatccttgagggaggcccaactcgtttgagctgtttgcaccccc 40635977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 64 - 158
Target Start/End: Complemental strand, 38400892 - 38400798
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacc 158  Q
    |||||||||||| ||||||||||||||| |||||||||||| |||||||| | ||||   | || ||||||| |||||||||| ||||| |||||    
T  38400892 atgttctatttaaattttttaaaagataaatacaaggtgtcatatatatgcgatacattcaaaggtgaaaatcactaccgtatacatgaggaacc 38400798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 202 - 250
Target Start/End: Complemental strand, 3399572 - 3399524
Alignment:
Q  202 aggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  3399572 aggcccatccttgagggaggtccaactcgtttgagctgtttgcaccccc 3399524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 218 - 261
Target Start/End: Original strand, 5952949 - 5952992
Alignment:
Q  218 gaggcccagctcgtttgagctgtttgcaccccccagggacgccc 261  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  5952949 gaggcccagctcgtttgagctgtttgcacccctcagggacgccc 5952992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 250
Target Start/End: Original strand, 41213928 - 41213979
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||||| ||||||| |||||||||||| ||||||||||||||||    
T  41213928 ttgaggcccatcctcgagggagacccagctcgtttaagctgtttgcaccccc 41213979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 64 - 135
Target Start/End: Complemental strand, 42029239 - 42029168
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaat 135  Q
    |||||||||||| ||||||||||||||| ||| |||||||| |||| |||| ||||||||| || |||||||    
T  42029239 atgttctatttaaattttttaaaagataaatataaggtgtcatatacatgttgtacacctaaaggtgaaaat 42029168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 200 - 260
Target Start/End: Original strand, 8907330 - 8907391
Alignment:
Q  200 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagggacgcc 260  Q
    |||| |||||| |||||||||| |||||| ||||||||||||||||||||| ||||||||||    
T  8907330 tgagacccatctttgagggaggtccagcttgtttgagctgtttgcaccccctcagggacgcc 8907391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 158
Target Start/End: Original strand, 7742132 - 7742236
Alignment:
Q  55 aaaagagcgatgttctatttatatttt-ttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgat 153  Q
    |||||| | |||||||||||||||||| |||||||||| |||||| ||||| |||||||| | |||| | | || ||||||  |||| |||||||||||     
T  7742132 aaaagaacaatgttctatttatatttttttaaaagataaatacaatgtgtcatatatatgcgttacatccaaaggtgaaaaatactatcgtatgcatgag 7742231  T
Q  154 gaacc 158  Q
    |||||    
T  7742232 gaacc 7742236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 55 - 122
Target Start/End: Original strand, 13800543 - 13800610
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacc 122  Q
    |||||| | |||||||||||| ||||||||||||||| ||| |||||| |||||||||| | ||||||    
T  13800543 aaaagaacaatgttctatttaaattttttaaaagataaatataaggtgccgtatatatgcgatacacc 13800610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 55 - 122
Target Start/End: Original strand, 28425709 - 28425776
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacc 122  Q
    |||||| | |||||||||||| |  |||||||||||| |||||||||||||||||||||  |||||||    
T  28425709 aaaagaacaatgttctatttaaaaattttaaaagataaatacaaggtgtcgtatatatgcagtacacc 28425776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 112
Target Start/End: Original strand, 11952596 - 11952643
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatat 112  Q
    |||||||||||| ||||||||||||||| |||||| |||||||||||||    
T  11952596 atgttctatttaaattttttaaaagata-atacaaagtgtcgtatatat 11952643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 258
Target Start/End: Original strand, 27506975 - 27507035
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagggacg 258  Q
    |||||||||||   |||||||||||||||||  ||||||||||||||||||| ||||||||    
T  27506975 ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcagggacg 27507035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 9045898 - 9045847
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||   |||||||||||||||||  |||||||||||||||||||    
T  9045898 ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccc 9045847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 24410302 - 24410251
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||   |||||||||||||||||  |||||||||||||||||||    
T  24410302 ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccc 24410251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 26715997 - 26715946
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||   |||||||||||||||||  |||||||||||||||||||    
T  26715997 ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccc 26715946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 64 - 106
Target Start/End: Complemental strand, 10252510 - 10252468
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgt 106  Q
    |||||| ||||| ||||||||||||||| ||||||||||||||    
T  10252510 atgttcaatttaaattttttaaaagataaatacaaggtgtcgt 10252468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 21190927 - 21190979
Alignment:
Q  200 tgaggcccat-ccttgagggaggcccagctcgtttgagctgtttgcacccccca 252  Q
    |||||||||| ||||| ||||||||||||||  |||||||||||||||||||||    
T  21190927 tgaggcccataccttg-gggaggcccagctccattgagctgtttgcacccccca 21190979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 30175584 - 30175532
Alignment:
Q  200 tgaggcccat-ccttgagggaggcccagctcgtttgagctgtttgcacccccca 252  Q
    |||||||||| ||||| ||||||||||||||  |||||||||||||||||||||    
T  30175584 tgaggcccataccttg-gggaggcccagctccattgagctgtttgcacccccca 30175532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 45156348 - 45156400
Alignment:
Q  200 tgaggcccat-ccttgagggaggcccagctcgtttgagctgtttgcacccccca 252  Q
    |||||||||| ||||| ||||||||||||||  |||||||||||||||||||||    
T  45156348 tgaggcccataccttg-gggaggcccagctccattgagctgtttgcacccccca 45156400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 87
Target Start/End: Original strand, 1396698 - 1396730
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaa 87  Q
    |||||||| ||||||||||||||||||||||||    
T  1396698 aaaagagcaatgttctatttatattttttaaaa 1396730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 147; Significance: 3e-77; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 55 - 268
Target Start/End: Original strand, 37430157 - 37430371
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| | ||||||||||| | |||||||||||||||| ||||| |    
T  37430157 aaaagagcgatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcgttacacctagaggtaaaaatgactaccgtatacatgagg 37430256  T
Q  155 aacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cag 253  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||||||||||| ||     
T  37430257 aaccctcacgtaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttaaggaaggcccaactcgtttgagctgtttgcaccccctcaa 37430356  T
Q  254 ggacgcccttgcata 268  Q
    |||||||| ||||||    
T  37430357 ggacgcccctgcata 37430371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 13534645 - 13534809
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    |||||||||||||| ||||||||||||| ||||        |||||||| |||||||||||||||||||||||||||| ||||||| || ||||||||||    
T  13534645 atgaaaagaggccagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatattttttaaaagataaatacaag-tgccgtatatatg 13534743  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaatcaa 179  Q
     |||||||| |||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  13534744 cggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaa 13534809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 14 - 179
Target Start/End: Original strand, 13624185 - 13624349
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    |||||||||||||| ||||||||||||| ||||        |||||||| |||||||||||||||||||||||||||| ||||||| || ||||||||||    
T  13624185 atgaaaagaggccagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatattttttaaaagataaatacaag-tgccgtatatatg 13624283  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaatcaa 179  Q
     |||||||| |||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  13624284 cggtacacccagaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaa 13624349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 14 - 175
Target Start/End: Complemental strand, 45475962 - 45475801
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    |||||||||||||| ||||||||||||| ||||        |||||||| |||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  45475962 atgaaaagaggccagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatg 45475863  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaa 175  Q
     |||||||| | || |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  45475862 cggtacacccataggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 45475801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 55 - 179
Target Start/End: Original strand, 2952220 - 2952344
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||||| |||||||||||||||||||||||||||| |||||| ||| |||||||||| |||||||| ||||||||||||||||||||||| ||||| |    
T  2952220 aaaagagcaatgttctatttatattttttaaaagataaatacaaagtgccgtatatatgcggtacacccagagatgaaaatgactaccgtatacatgagg 2952319  T
Q  155 aacccccacctaacaccaaaatcaa 179  Q
    |||||||||||||||||||||||||    
T  2952320 aacccccacctaacaccaaaatcaa 2952344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 162 - 261
Target Start/End: Original strand, 20003839 - 20003939
Alignment:
Q  162 acctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagggacgcc 260  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20003839 acctaacaccaaaatcaatcatgaggaacccccactcttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcagggacgcc 20003938  T
Q  261 c 261  Q
    |    
T  20003939 c 20003939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 55 - 179
Target Start/End: Complemental strand, 30883433 - 30883309
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||||| |||||||||||||||||||||||||||| |||||| ||| |||||||||| |||||||| |||| |||||||||||||||||| ||||| |    
T  30883433 aaaagagcaatgttctatttatattttttaaaagataaatacaatgtgccgtatatatgcggtacacccagaggtgaaaatgactaccgtatacatgagg 30883334  T
Q  155 aacccccacctaacaccaaaatcaa 179  Q
    |||||||||||||||||||||||||    
T  30883333 aacccccacctaacaccaaaatcaa 30883309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 55 - 179
Target Start/End: Original strand, 3048516 - 3048640
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||||| || | ||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||| || || |    
T  3048516 aaaagagcaatatactatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacctagagatgaaaatgactaccgtatacacgagg 3048615  T
Q  155 aacccccacctaacaccaaaatcaa 179  Q
    ||||| |||||||||||||||||||    
T  3048616 aaccctcacctaacaccaaaatcaa 3048640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 14 - 175
Target Start/End: Original strand, 23606587 - 23606748
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    |||||||||| ||| ||||||||||||| ||||        |||||||| |||||||||||||||||||||||||||| ||| |||||| ||||||||||    
T  23606587 atgaaaagagaccagtgataaaatcaaaacgtattttttttaaaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatg 23606686  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaa 175  Q
     |||||||| | || | |||||||||||||||| ||||| ||||||||||||||||||||||    
T  23606687 cggtacacccaaaggtaaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 23606748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 56 - 179
Target Start/End: Original strand, 5860744 - 5860867
Alignment:
Q  56 aaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatga 155  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| |||| |||||||||||||| ||| |||||  |    
T  5860744 aaagagcaatgttctatttatattttttaaaagataaatacaaggtgccgtatatatgcggtacacccagaggtgaaaatgactaccatatacatgagaa 5860843  T
Q  156 acccccacctaacaccaaaatcaa 179  Q
    ||||| ||||||||||||||||||    
T  5860844 accccaacctaacaccaaaatcaa 5860867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 55 - 175
Target Start/End: Complemental strand, 42600886 - 42600766
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||| ||| ||| |||||||||||||||||||||||| ||| |||||| ||||||||||||||||||| | || |||||||||||||||||| ||||| |    
T  42600886 aaaaaagcaatgatctatttatattttttaaaagataaatataaggtgccgtatatatgtggtacacccaaaggtgaaaatgactaccgtatacatgagg 42600787  T
Q  155 aacccccacctaacaccaaaa 175  Q
    |||||||||||||||||||||    
T  42600786 aacccccacctaacaccaaaa 42600766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 23798261 - 23798380
Alignment:
Q  56 aaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatga 155  Q
    ||||||| |||||||||||||||||||||||||||| ||| |||||| |||||||||| |||||||| | |  |||||||||||||||||| ||||| ||    
T  23798261 aaagagcaatgttctatttatattttttaaaagataaatataaggtgccgtatatatgcggtacacccaaaagtgaaaatgactaccgtatacatgagga 23798360  T
Q  156 acccccacctaacaccaaaa 175  Q
    ||||||||||||||||||||    
T  23798361 acccccacctaacaccaaaa 23798380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 14 - 175
Target Start/End: Complemental strand, 10917536 - 10917375
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    |||||||||||||| ||||||||||||| ||||        |||| | | ||| |||||||||||||||||||||||| ||| |||||| ||||||||||    
T  10917536 atgaaaagaggccagtgataaaatcaaaacgtatttttttaaaaaaaacaatgatctatttatattttttaaaagataaatataaggtgccgtatatatg 10917437  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaa 175  Q
     |||||||| | || |||||||||||||| ||| ||||| ||||||||||||||||||||||    
T  10917436 cggtacacccaaaggtgaaaatgactaccttatacatgaggaacccccacctaacaccaaaa 10917375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 55 - 179
Target Start/End: Complemental strand, 41879285 - 41879161
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||| | |||||||||||||||||||||||||||| |||||||||  |||||||||| |||||| | | || ||||||||||||||| || |||||      
T  41879285 aaaagaacaatgttctatttatattttttaaaagataaatacaaggtaccgtatatatgcggtacatccaaaggtgaaaatgactaccgaatacatgaga 41879186  T
Q  155 aacccccacctaacaccaaaatcaa 179  Q
    |||||||||||||||||||||||||    
T  41879185 aacccccacctaacaccaaaatcaa 41879161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 55 - 146
Target Start/End: Original strand, 5973106 - 5973197
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtat 146  Q
    |||||| | |||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||| | |||||||||| | ||||||||    
T  5973106 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgttgtacacccatagatgaaaatcattaccgtat 5973197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 200 - 261
Target Start/End: Original strand, 2952473 - 2952535
Alignment:
Q  200 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagggacgccc 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  2952473 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcagggacgccc 2952535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 200 - 261
Target Start/End: Original strand, 5860996 - 5861058
Alignment:
Q  200 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagggacgccc 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5860996 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcagggacgccc 5861058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 200 - 250
Target Start/End: Original strand, 3048774 - 3048824
Alignment:
Q  200 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3048774 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 3048824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 200 - 261
Target Start/End: Complemental strand, 30883175 - 30883113
Alignment:
Q  200 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccc-cccagggacgccc 261  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||    
T  30883175 tgaggcccatccttgagggaggcccagctcgtttgagctgtttgcacccactcagggacgccc 30883113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 55 - 152
Target Start/End: Complemental strand, 11290288 - 11290191
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatga 152  Q
    |||||| | ||||| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||  | || ||||||| |||||||||| |||||    
T  11290288 aaaagaacaatgttttatttaaattttttaaaagataaatacaaggtgtcgtatatatgttgtacactcaaaggtgaaaatcactaccgtatacatga 11290191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 55 - 152
Target Start/End: Original strand, 34789861 - 34789958
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatga 152  Q
    |||||| |||||||||||||| || | |||||||||| ||||||| |||||||||||||| ||||||| | || ||||||| |||||||||| |||||    
T  34789861 aaaagaacgatgttctatttaaatctcttaaaagataaatacaagatgtcgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatga 34789958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 55 - 158
Target Start/End: Original strand, 7944521 - 7944624
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||| | ||||| |||||| ||||||||||| ||| |||||||||| ||||||||||| ||||||| | || ||||||| |||||||||| ||||| |    
T  7944521 aaaagaacaatgttttatttaaattttttaaaaaataaatacaaggtgccgtatatatgttgtacacccaaaggtgaaaatcactaccgtatacatgagg 7944620  T
Q  155 aacc 158  Q
    ||||    
T  7944621 aacc 7944624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 64 - 158
Target Start/End: Complemental strand, 8103007 - 8102913
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacc 158  Q
    ||||| |||||| ||||||||||||||| ||||||||||  ||||||||| |||||||||| || ||||||| | |||||||| ||||| |||||    
T  8103007 atgttatatttaaattttttaaaagataaatacaaggtgcagtatatatgcggtacacctaaaggtgaaaatcattaccgtatacatgaggaacc 8102913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 78 - 158
Target Start/End: Complemental strand, 5942777 - 5942697
Alignment:
Q  78 ttttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacc 158  Q
    |||||||||||||| ||||||| |||||||||| || |||||||| | || ||||||| |||||||||| ||||| |||||    
T  5942777 ttttttaaaagataaatacaagatgtcgtatatgtgcggtacacccaaaggtgaaaatcactaccgtatacatgaggaacc 5942697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 55 - 158
Target Start/End: Original strand, 41677172 - 41677276
Alignment:
Q  55 aaaagagcgatgttctatttatatttt-ttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgat 153  Q
    |||||| | |||||||||||| ||||| |||||||||| ||||||| ||||||||||||| | |||| ||| || ||||||| ||||| |||| |||||     
T  41677172 aaaagaacaatgttctatttaaatttttttaaaagataaatacaagatgtcgtatatatgcgatacatctaaaggtgaaaatcactactgtatacatgag 41677271  T
Q  154 gaacc 158  Q
    |||||    
T  41677272 gaacc 41677276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 41878231 - 41878180
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    ||||||| |||||||||||||||| || ||||||||||||||||||||||||    
T  41878231 ttgaggctcatccttgagggaggctcaactcgtttgagctgtttgcaccccc 41878180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 199 - 250
Target Start/End: Complemental strand, 45472257 - 45472206
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||||||| ||| ||||||||||| |||||||||||||||||||    
T  45472257 ttgaggcccatccttgggggtggcccagctcggttgagctgtttgcaccccc 45472206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 55 - 113
Target Start/End: Complemental strand, 8646309 - 8646251
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    |||||| | |||||||||||| ||||||||||||||| ||||||||| |||||||||||    
T  8646309 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtatcgtatatatg 8646251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 64 - 158
Target Start/End: Original strand, 39332413 - 39332507
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacc 158  Q
    ||||||||||||  ||||| |||||||| |||||||||||| |||||| | |||||| | | || ||||||| |||||||||| ||||| |||||    
T  39332413 atgttctatttaattttttaaaaagataaatacaaggtgtcatatataagcggtacatccaaaggtgaaaatcactaccgtatacatgaggaacc 39332507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 55 - 158
Target Start/End: Original strand, 15167414 - 15167517
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||| | |||||||||||| ||||||||||||||| ||| || |||| ||||||||| | |||||| | |  ||||||| |||| ||||| ||||| |    
T  15167414 aaaagaacaatgttctatttaaattttttaaaagataaatataaagtgttgtatatatgcgatacacccaaatgtgaaaatcactatcgtatacatgagg 15167513  T
Q  155 aacc 158  Q
    ||||    
T  15167514 aacc 15167517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 64 - 135
Target Start/End: Original strand, 23941099 - 23941170
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaat 135  Q
    ||||| |||||| ||||||||||||||| |||||||||||| |||||| | | |||||| | ||||||||||    
T  23941099 atgttttatttaaattttttaaaagataaatacaaggtgtcatatataagcgatacacccaaagatgaaaat 23941170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 64 - 113
Target Start/End: Original strand, 30674411 - 30674460
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    |||||||||||| || |||||||||||| ||| |||||||||||||||||    
T  30674411 atgttctatttaaatgttttaaaagataaatataaggtgtcgtatatatg 30674460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 199 - 258
Target Start/End: Complemental strand, 42600650 - 42600590
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagggacg 258  Q
    |||||||||||   |||||||||||||||||  ||||||||||||||||||| ||||||||    
T  42600650 ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccccctcagggacg 42600590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 152
Target Start/End: Original strand, 34048713 - 34048803
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcg--tatatatgtggtacacctagagatgaaaatgactaccgtatgcatga 152  Q
    |||||||||||| |  |||||||||||| |||||| ||||||  ||||||| || |||||| | |||||||||| ||||| |||| |||||    
T  34048713 atgttctatttaaacattttaaaagataaatacaatgtgtcgtatatatatatgatacacccaaagatgaaaatcactactgtatacatga 34048803  T

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Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 64 - 146
Target Start/End: Complemental strand, 5721654 - 5721572
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtat 146  Q
    ||||||||||||  |||||||||||||| |||||||||| | ||||||   |||||||| | |  ||||||| ||||||||||    
T  5721654 atgttctatttaatttttttaaaagataaatacaaggtgccctatataatcggtacacccaaaagtgaaaatcactaccgtat 5721572  T

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Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 64 - 102
Target Start/End: Original strand, 34868185 - 34868223
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtg 102  Q
    |||||||||||| ||||||||||||||| ||||||||||    
T  34868185 atgttctatttaaattttttaaaagataaatacaaggtg 34868223  T

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Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 9108588 - 9108551
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggt 101  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  9108588 atgttctatttaaattttttaaaagataaatacaaggt 9108551  T

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Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 213 - 250
Target Start/End: Complemental strand, 10917246 - 10917209
Alignment:
Q  213 tgagggaggcccagctcgtttgagctgtttgcaccccc 250  Q
    |||||||||||||||||  |||||||||||||||||||    
T  10917246 tgagggaggcccagctctgttgagctgtttgcaccccc 10917209  T

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Target: scaffold0070 (Bit Score: 94; Significance: 1e-45; HSPs: 2)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 14 - 179
Target Start/End: Complemental strand, 1488 - 1323
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    ||||||||||| || ||||||||||||| ||||        ||||||||  ||||||||||||||||||||||||||| ||||||| || ||||||||||    
T  1488 atgaaaagaggtcagtgataaaatcaaaacgtattttttttaaaagagcactgttctatttatattttttaaaagataaatacaagctgccgtatatatg 1389  T
Q  114 tggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaatcaa 179  Q
     |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  1388 cggtacacccagagatgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaatcaa 1323  T

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Target: scaffold0070; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 199 - 266
Target Start/End: Complemental strand, 1077 - 1009
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccccc-cagggacgcccttgca 266  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  1077 ttgaggtccatccttgagggaggcccagctcgtttgagctgtttgcaccccctcagggacgcccctgca 1009  T

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Target: scaffold0001 (Bit Score: 87; Significance: 2e-41; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 109 - 227
Target Start/End: Complemental strand, 181969 - 181851
Alignment:
Q  109 atatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaatcaatcatgaggaacccccactcttgaggccca 208  Q
    ||||| |||||| | |||| |||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  181969 atatgcggtacatccagaggtgaaaatgactaccgtatacatgaggaacccccatctaacaccaaaatcaatcatgaggaacccccactcttgagaccca 181870  T
Q  209 tccttgagggaggcccagc 227  Q
    |||||||||||||||||||    
T  181869 tccttgagggaggcccagc 181851  T

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Target: scaffold0001; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 14 - 115
Target Start/End: Complemental strand, 183205 - 183104
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnnaaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatg 113  Q
    |||||||||||||| ||||||||| ||| ||||        ||||||| ||||||||||||||||||||||||||||| |||||| || |||||||||||    
T  183205 atgaaaagaggccagtgataaaattaaaacgtattttttttaaaagagagatgttctatttatattttttaaaagataaatacaaagtatcgtatatatg 183106  T
Q  114 tg 115  Q
    ||    
T  183105 tg 183104  T

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Target: scaffold0001; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 181480 - 181438
Alignment:
Q  220 ggcccagctcgtttgagctgtttgcaccccc-cagggacgccc 261  Q
    ||||||||||||||||||||||||||||||| |||||||||||    
T  181480 ggcccagctcgtttgagctgtttgcaccccctcagggacgccc 181438  T

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Target: scaffold0039 (Bit Score: 83; Significance: 4e-39; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 14 - 175
Target Start/End: Complemental strand, 106684 - 106522
Alignment:
Q  14 atgaaaagaggccaatgataaaatcaaaccgtannnnnnnn-aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatat 112  Q
    |||||||||||||| ||||||||||||| ||||         |||||| | |||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  106684 atgaaaagaggccagtgataaaatcaaaacgtatttttttttaaaagaacaatgttctatttatattttttaaaagataaatataaggtgtcgtatatat 106585  T
Q  113 gtggtacacctagagatgaaaatgactaccgtatgcatgatgaacccccacctaacaccaaaa 175  Q
    | |||||||| | || |||||||||||||||||| ||||| ||||||||||||||||||||||    
T  106584 gcggtacacccaaaggtgaaaatgactaccgtatacatgaggaacccccacctaacaccaaaa 106522  T

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Target: scaffold0039; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 106445 - 106396
Alignment:
Q  199 ttgaggcccatccttgagggaggcccagctcgtttgagctgtttgcaccc 248  Q
    |||||||||||   |||||||||||||||||  |||||||||||||||||    
T  106445 ttgaggcccatgactgagggaggcccagctctgttgagctgtttgcaccc 106396  T

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Target: scaffold1590 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold1590
Description:

Target: scaffold1590; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 55 - 158
Target Start/End: Original strand, 257 - 360
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||| | |||||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||| | |  ||||||| |||||||||| |||||||    
T  257 aaaagaacaatgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaatgtgaaaatcactaccgtatacatgatg 356  T
Q  155 aacc 158  Q
    ||||    
T  357 aacc 360  T

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Target: scaffold0012 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 64 - 158
Target Start/End: Original strand, 206497 - 206591
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatgaacc 158  Q
    |||||||||||| ||||| ||||||||| ||||||||||||||||||||| |||||||| |  | ||||||| |||||||||| ||||| |||||    
T  206497 atgttctatttaaattttgtaaaagataaatacaaggtgtcgtatatatgcggtacacccaatggtgaaaatcactaccgtatacatgaggaacc 206591  T

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Target: scaffold0182 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 67 - 150
Target Start/End: Original strand, 24004 - 24087
Alignment:
Q  67 ttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcat 150  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||| | |  ||||||| | ||||||||||||    
T  24004 ttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcggtacacccaaaagtgaaaatcattaccgtatgcat 24087  T

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Target: scaffold0097 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 64 - 146
Target Start/End: Complemental strand, 39020 - 38938
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtat 146  Q
    |||||||||||| ||||||||||||||| ||||||||||||||||||||| | |||||  | |  ||||||| ||||||||||    
T  39020 atgttctatttaaattttttaaaagataaatacaaggtgtcgtatatatgcgatacacacaaatgtgaaaatcactaccgtat 38938  T

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Target: scaffold0018 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 64 - 146
Target Start/End: Original strand, 173518 - 173600
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtat 146  Q
    |||||||||||| ||||||||||||||| |||||||||  |||||||||| | |||||| | || | ||||| ||||||||||    
T  173518 atgttctatttaaattttttaaaagataaatacaaggtaccgtatatatgcgatacacccaaaggtaaaaatcactaccgtat 173600  T

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Target: scaffold0003 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 82 - 135
Target Start/End: Original strand, 351360 - 351413
Alignment:
Q  82 ttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaat 135  Q
    |||||||||| |||||||||||||||||||||| ||||||| | || |||||||    
T  351360 ttaaaagataaatacaaggtgtcgtatatatgttgtacacccaaaggtgaaaat 351413  T

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Target: scaffold0022 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 40191 - 40122
Alignment:
Q  55 aaaagagcgatgttctattta--tattttttaaaagatatatacaaggtgtcgtatatatgtggtacacc 122  Q
    |||||| | ||||||||||||  | |||||||||||||| |||||||||| ||||| ||||| |||||||    
T  40191 aaaagaacaatgttctatttaatttttttttaaaagataaatacaaggtgccgtatttatgttgtacacc 40122  T

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Target: scaffold0022; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 122
Target Start/End: Complemental strand, 138251 - 138182
Alignment:
Q  55 aaaagagcgatgttctattta--tattttttaaaagatatatacaaggtgtcgtatatatgtggtacacc 122  Q
    |||||| | ||||||||||||  | |||||||||||||| |||||||||| ||||| ||||| |||||||    
T  138251 aaaagaacaatgttctatttaatttttttttaaaagataaatacaaggtgccgtatttatgttgtacacc 138182  T

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Target: scaffold0007 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 157
Target Start/End: Original strand, 230858 - 230960
Alignment:
Q  55 aaaagagcgatgttctatttatattttttaaaagatatatacaaggtgtcgtatatatgtggtacacctagagatgaaaatgactaccgtatgcatgatg 154  Q
    |||||| | |||||||||||| |||| |||||||||| ||  ||||||| ||||||||| | || ||| | || ||||||| |||||| ||| ||||| |    
T  230858 aaaagaacaatgttctatttaaatttgttaaaagataaatttaaggtgttgtatatatgcgatatacccaaaggtgaaaatcactaccttatacatgagg 230957  T
Q  155 aac 157  Q
    |||    
T  230958 aac 230960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 64 - 101
Target Start/End: Complemental strand, 16160 - 16123
Alignment:
Q  64 atgttctatttatattttttaaaagatatatacaaggt 101  Q
    |||||||||||| ||||||||||||||| |||||||||    
T  16160 atgttctatttaaattttttaaaagataaatacaaggt 16123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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