View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2696_low_30 (Length: 401)

Name: NF2696_low_30
Description: NF2696
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2696_low_30
NF2696_low_30
[»] chr1 (24 HSPs)
chr1 (1-386)||(40312873-40313258)
chr1 (1-386)||(45598980-45599364)
chr1 (1-385)||(33062511-33062895)
chr1 (1-386)||(17012127-17012511)
chr1 (1-386)||(52436466-52436854)
chr1 (1-131)||(11085309-11085439)
chr1 (171-382)||(17038374-17038588)
chr1 (23-87)||(17038652-17038716)
chr1 (339-378)||(10340145-10340184)
chr1 (339-382)||(17379610-17379653)
chr1 (339-386)||(20841252-20841299)
chr1 (339-378)||(47941327-47941366)
chr1 (124-170)||(8902354-8902400)
chr1 (339-378)||(1973445-1973484)
chr1 (339-382)||(17355818-17355861)
chr1 (339-378)||(17851360-17851399)
chr1 (339-382)||(18390092-18390135)
chr1 (339-378)||(26972386-26972425)
chr1 (339-381)||(4246165-4246207)
chr1 (339-381)||(11667850-11667892)
chr1 (339-381)||(14745770-14745812)
chr1 (339-381)||(24986129-24986171)
chr1 (339-380)||(8282050-8282091)
chr1 (341-378)||(23477924-23477961)
[»] chr8 (24 HSPs)
chr8 (1-382)||(8726972-8727352)
chr8 (1-385)||(17280013-17280397)
chr8 (1-386)||(39081089-39081474)
chr8 (1-386)||(37155173-37155560)
chr8 (5-386)||(17880391-17880774)
chr8 (1-386)||(33465808-33466195)
chr8 (1-157)||(22876365-22876524)
chr8 (1-162)||(23250077-23250240)
chr8 (124-382)||(1684103-1684367)
chr8 (339-386)||(12240366-12240413)
chr8 (338-381)||(13660359-13660402)
chr8 (338-381)||(13719002-13719045)
chr8 (339-382)||(23249863-23249906)
chr8 (339-382)||(23864455-23864498)
chr8 (339-381)||(11221260-11221302)
chr8 (339-386)||(1562355-1562402)
chr8 (339-378)||(24092089-24092128)
chr8 (339-381)||(20254863-20254905)
chr8 (339-381)||(22476360-22476402)
chr8 (339-381)||(22485263-22485305)
chr8 (339-381)||(27925434-27925476)
chr8 (342-380)||(33961871-33961909)
chr8 (339-381)||(45136244-45136286)
chr8 (339-380)||(33977188-33977229)
[»] chr7 (50 HSPs)
chr7 (1-386)||(48797268-48797653)
chr7 (1-386)||(7620204-7620590)
chr7 (1-386)||(14975556-14975941)
chr7 (1-386)||(15405032-15405417)
chr7 (1-386)||(14984795-14985179)
chr7 (1-386)||(15414406-15414790)
chr7 (1-386)||(11628764-11629148)
chr7 (1-325)||(30226253-30226578)
chr7 (1-282)||(12560862-12561144)
chr7 (29-382)||(24049578-24049932)
chr7 (1-160)||(3285951-3286110)
chr7 (228-386)||(3290559-3290718)
chr7 (77-382)||(11560228-11560536)
chr7 (309-386)||(42782880-42782957)
chr7 (137-382)||(9564383-9564634)
chr7 (104-378)||(9567036-9567317)
chr7 (156-233)||(3288349-3288425)
chr7 (124-367)||(4794353-4794602)
chr7 (309-381)||(24902234-24902306)
chr7 (340-386)||(30226210-30226256)
chr7 (339-385)||(31269044-31269090)
chr7 (339-382)||(7508562-7508605)
chr7 (339-382)||(9894054-9894097)
chr7 (339-382)||(23296631-23296674)
chr7 (342-381)||(23957006-23957045)
chr7 (339-378)||(26132903-26132942)
chr7 (339-378)||(42636379-42636418)
chr7 (339-381)||(4458869-4458911)
chr7 (339-381)||(13455099-13455141)
chr7 (339-381)||(14165295-14165337)
chr7 (339-385)||(14687492-14687538)
chr7 (104-170)||(4547558-4547626)
chr7 (339-380)||(20588695-20588736)
chr7 (341-381)||(11999009-11999049)
chr7 (339-378)||(645266-645305)
chr7 (339-378)||(10660995-10661034)
chr7 (339-382)||(15708299-15708342)
chr7 (339-386)||(20596812-20596859)
chr7 (339-386)||(23057330-23057377)
chr7 (339-381)||(7586517-7586559)
chr7 (339-381)||(10038715-10038757)
chr7 (340-382)||(11406938-11406980)
chr7 (339-381)||(11588594-11588636)
chr7 (339-381)||(20991671-20991713)
chr7 (339-373)||(29546125-29546159)
chr7 (339-380)||(6045448-6045489)
chr7 (341-378)||(10279946-10279983)
chr7 (341-382)||(23174870-23174911)
chr7 (339-380)||(24814055-24814096)
chr7 (317-381)||(23082740-23082804)
[»] chr3 (29 HSPs)
chr3 (1-382)||(9036835-9037214)
chr3 (1-386)||(8749163-8749547)
chr3 (73-270)||(9031127-9031324)
chr3 (291-386)||(9031321-9031416)
chr3 (94-198)||(11564326-11564429)
chr3 (23-99)||(11561164-11561240)
chr3 (124-380)||(13913920-13914182)
chr3 (266-378)||(286807-286918)
chr3 (335-383)||(13917969-13918017)
chr3 (339-378)||(18064193-18064232)
chr3 (339-378)||(28051268-28051307)
chr3 (339-381)||(13790809-13790851)
chr3 (339-381)||(20748151-20748193)
chr3 (339-381)||(21718913-21718955)
chr3 (339-381)||(24195653-24195695)
chr3 (336-384)||(11558308-11558356)
chr3 (336-384)||(11567577-11567625)
chr3 (341-381)||(44452610-44452650)
chr3 (339-382)||(215333-215376)
chr3 (339-378)||(6580854-6580893)
chr3 (339-386)||(14406616-14406663)
chr3 (339-378)||(18034883-18034922)
chr3 (344-382)||(7495921-7495959)
chr3 (339-381)||(13515583-13515625)
chr3 (339-381)||(15686146-15686188)
chr3 (339-381)||(17702536-17702578)
chr3 (340-381)||(980355-980395)
chr3 (339-380)||(21094689-21094730)
chr3 (339-380)||(23954544-23954585)
[»] chr5 (23 HSPs)
chr5 (1-386)||(7897564-7897950)
chr5 (4-386)||(20497804-20498188)
chr5 (1-386)||(17920435-17920819)
chr5 (23-386)||(26182905-26183269)
chr5 (23-247)||(20286822-20287049)
chr5 (236-382)||(20740821-20740968)
chr5 (170-381)||(22130665-22130879)
chr5 (264-380)||(13941912-13942026)
chr5 (268-382)||(9522662-9522773)
chr5 (339-382)||(22979874-22979917)
chr5 (339-381)||(13734961-13735003)
chr5 (339-381)||(20845782-20845824)
chr5 (339-381)||(22404749-22404791)
chr5 (339-388)||(18221232-18221281)
chr5 (102-229)||(11205008-11205135)
chr5 (339-374)||(13338727-13338762)
chr5 (339-382)||(17661399-17661442)
chr5 (339-378)||(20714724-20714763)
chr5 (339-378)||(22184586-22184625)
chr5 (339-378)||(26329202-26329241)
chr5 (339-378)||(30605679-30605718)
chr5 (339-381)||(24189992-24190034)
chr5 (339-380)||(9422505-9422546)
[»] chr4 (26 HSPs)
chr4 (1-386)||(23541367-23541752)
chr4 (23-386)||(25354307-25354671)
chr4 (1-386)||(19894463-19894839)
chr4 (5-367)||(46738918-46739275)
chr4 (1-386)||(11324794-11325180)
chr4 (1-386)||(22555095-22555482)
chr4 (1-386)||(24143258-24143643)
chr4 (1-382)||(11905221-11905605)
chr4 (1-179)||(15687349-15687528)
chr4 (339-382)||(10198239-10198282)
chr4 (339-381)||(10722112-10722154)
chr4 (339-381)||(10935881-10935923)
chr4 (342-386)||(2679969-2680013)
chr4 (339-381)||(8163914-8163956)
chr4 (339-381)||(10724388-10724430)
chr4 (339-381)||(10938157-10938199)
chr4 (339-381)||(19659568-19659610)
chr4 (339-381)||(21478237-21478279)
chr4 (339-381)||(25116955-25116997)
chr4 (266-378)||(19183593-19183708)
chr4 (339-378)||(9069077-9069116)
chr4 (339-378)||(16655327-16655366)
chr4 (339-378)||(33746095-33746134)
chr4 (339-381)||(10191016-10191058)
chr4 (339-381)||(23400182-23400224)
chr4 (339-381)||(33898976-33899018)
[»] chr6 (31 HSPs)
chr6 (1-386)||(16137230-16137617)
chr6 (1-386)||(19216077-19216463)
chr6 (73-386)||(12444443-12444757)
chr6 (1-386)||(9384738-9385125)
chr6 (23-367)||(32452131-32452475)
chr6 (1-386)||(15002809-15003197)
chr6 (155-386)||(15038471-15038701)
chr6 (57-265)||(20003347-20003556)
chr6 (33-301)||(15003975-15004245)
chr6 (297-386)||(20003261-20003350)
chr6 (259-382)||(21323181-21323305)
chr6 (267-382)||(16309270-16309389)
chr6 (339-384)||(18152694-18152739)
chr6 (339-381)||(17855324-17855366)
chr6 (339-381)||(20470191-20470233)
chr6 (303-381)||(26965522-26965600)
chr6 (339-381)||(13195453-13195495)
chr6 (339-381)||(17864413-17864455)
chr6 (339-381)||(33665923-33665965)
chr6 (318-378)||(28623660-28623720)
chr6 (339-382)||(20764982-20765025)
chr6 (339-378)||(21723396-21723435)
chr6 (339-378)||(25805585-25805624)
chr6 (339-381)||(9281696-9281738)
chr6 (339-381)||(11960612-11960654)
chr6 (343-381)||(17234721-17234759)
chr6 (339-381)||(20558431-20558473)
chr6 (339-381)||(20989753-20989795)
chr6 (339-381)||(25964824-25964866)
chr6 (339-381)||(25969471-25969513)
chr6 (339-381)||(25973911-25973953)
[»] scaffold0328 (1 HSPs)
scaffold0328 (29-386)||(16648-17007)
[»] scaffold0022 (1 HSPs)
scaffold0022 (23-386)||(3244-3607)
[»] chr2 (19 HSPs)
chr2 (1-386)||(18765800-18766189)
chr2 (1-386)||(29566135-29566523)
chr2 (1-386)||(13314613-13315001)
chr2 (1-134)||(18606246-18606379)
chr2 (339-386)||(27111203-27111250)
chr2 (268-381)||(21250116-21250228)
chr2 (339-378)||(26860284-26860323)
chr2 (339-386)||(27107634-27107681)
chr2 (339-381)||(12910619-12910661)
chr2 (339-381)||(22611022-22611064)
chr2 (339-381)||(23758755-23758797)
chr2 (339-381)||(36398782-36398824)
chr2 (341-386)||(20649547-20649592)
chr2 (339-383)||(19198267-19198311)
chr2 (339-386)||(12952596-12952643)
chr2 (339-382)||(20475264-20475307)
chr2 (339-382)||(20476565-20476608)
chr2 (339-382)||(31587603-31587646)
chr2 (339-381)||(24790146-24790188)
[»] scaffold0143 (1 HSPs)
scaffold0143 (1-386)||(36421-36808)
[»] scaffold0032 (1 HSPs)
scaffold0032 (29-386)||(103229-103588)
[»] scaffold0645 (1 HSPs)
scaffold0645 (23-99)||(1455-1531)
[»] scaffold0064 (3 HSPs)
scaffold0064 (104-378)||(52675-52954)
scaffold0064 (264-382)||(45778-45897)
scaffold0064 (1-65)||(52570-52635)
[»] scaffold0480 (1 HSPs)
scaffold0480 (4-382)||(11316-11699)
[»] scaffold0338 (1 HSPs)
scaffold0338 (339-381)||(16201-16243)
[»] scaffold0505 (1 HSPs)
scaffold0505 (339-382)||(10024-10067)
[»] scaffold0259 (1 HSPs)
scaffold0259 (339-381)||(17266-17308)
[»] scaffold0226 (3 HSPs)
scaffold0226 (339-381)||(7528-7570)
scaffold0226 (339-381)||(18115-18157)
scaffold0226 (339-381)||(27509-27551)
[»] scaffold0102 (1 HSPs)
scaffold0102 (339-381)||(37135-37177)
[»] scaffold0059 (2 HSPs)
scaffold0059 (339-381)||(61461-61503)
scaffold0059 (339-380)||(48332-48373)
[»] scaffold0020 (1 HSPs)
scaffold0020 (339-381)||(12498-12540)
[»] scaffold0520 (1 HSPs)
scaffold0520 (339-380)||(5548-5589)
[»] scaffold0423 (1 HSPs)
scaffold0423 (339-382)||(13735-13778)
[»] scaffold0008 (1 HSPs)
scaffold0008 (339-378)||(40467-40506)
[»] scaffold0103 (1 HSPs)
scaffold0103 (339-381)||(25661-25703)
[»] scaffold0037 (1 HSPs)
scaffold0037 (339-381)||(110244-110286)
[»] scaffold0015 (1 HSPs)
scaffold0015 (339-381)||(202523-202565)
[»] scaffold0006 (1 HSPs)
scaffold0006 (339-381)||(87865-87907)
[»] scaffold0185 (1 HSPs)
scaffold0185 (344-381)||(2351-2388)


Alignment Details
Target: chr1 (Bit Score: 318; Significance: 1e-179; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 318; E-Value: 1e-179
Query Start/End: Original strand, 1 - 386
Target Start/End: Original strand, 40312873 - 40313258
Alignment:
Q  1 ttctgaagcccaacaagatttatgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcatttgaagaatagatc 100  Q
    |||| |||||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  40312873 ttctaaagcccaacaagatttatgacccgtattgcttcagtatttaaacaagactggaagacctagagaagtattcaagccgtcatttgaagaatagatc 40312972  T
Q  101 atctagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaaac 200  Q
    ||||| | ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  40312973 atctatgattttgagtctgtttatgtgagcctttcgtgtatcatcttgatgcatgtttaggactgtgttttgagttgtattttgtgcactactctgaaac 40313072  T
Q  201 ttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgtttgaaggtaacttcatttcattgtgtttgt 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||| ||||||||||||||||    
T  40313073 ttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacagtttttagttattttgtttgaaggtaactttatttcattgtgtttgt 40313172  T
Q  301 agtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||    
T  40313173 agtttgagaatcacaggggttgtgatcagttgtaagggagtgagatgagatctcagatatatgagttcctaggttgaagtcagtac 40313258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 1 - 386
Target Start/End: Original strand, 45598980 - 45599364
Alignment:
Q  1 ttctgaagcccaacaagatttatgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcatttgaagaatagatc 100  Q
    |||||||||||||||||||| |||||  |||||||||  |||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||    
T  45598980 ttctgaagcccaacaagattaatgacacgtattgctttagtatttaaacaagactggaagacctagagaagtattcaagctgtcatttgaagaatagatc 45599079  T
Q  101 atctagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaaac 200  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||| ||||||||  |||||||||||||||||||    
T  45599080 atctagggttttgagtctgtttatgtgagcctttcgtgtatcattttgatgcatgtttaggactgtgttt-gagttgtaaattgtgcactactctgaaac 45599178  T
Q  201 ttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgtttgaaggtaacttcatttcattgtgtttgt 300  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||||   ||||||||||||||||||||| ||||||||||||||||||||||||    
T  45599179 ttttaagcaaagaggtaggtagtttgtaaactgcacctaagctgtgaagtatggtgtttagttgttttgtttgaaagtaacttcatttcattgtgtttgt 45599278  T
Q  301 agtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  45599279 aatttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttcctaggttgaagtcagtac 45599364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 1 - 385
Target Start/End: Complemental strand, 33062895 - 33062511
Alignment:
Q  1 ttctgaagcccaacaagatttatgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcattt-gaagaatagat 99  Q
    ||||||||||||||||| ||  ||||| |||||||||| |||||||||||||||| ||||| ||||||||  |||||||||||||||| |||||||||||    
T  33062895 ttctgaagcccaacaagtttactgacccgtattgcttcagtatttaaacaagactggaagatctagagaatcattcaagccgtcattttgaagaatagat 33062796  T
Q  100 catctagggttttgagtctgtt-tatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaa 198  Q
    ||||||||| ||||||| |||| | |||||||||||||||||||| ||||||| |||||||||| ||||||| ||||| ||   ||||||||||||||||    
T  33062795 catctaggggtttgagtttgttatttgtgagcctttcgtgtatcaccttgatgcatgtttaggactgtgttt-gagttataagctgtgcactactctgaa 33062697  T
Q  199 acttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttg-ttttgtttgaaggtaacttcatttcattgtgtt 297  Q
     |||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||| |||||||||||||||||||||||| ||||| ||    
T  33062696 gcttttaagcaaagagttaggtagtttgtaaactgcaccaaagctatgaagtacggtgtttagttgtttttgtttgaaggtaacttcatttgattgtatt 33062597  T
Q  298 tgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagta 385  Q
    |||| ||||||||||||| ||||||||||||   ||| |||| ||||||| | ||||||||||||||||| |||||||||||||||||    
T  33062596 tgtattttgagaatcacaggggttgtgatca--agtacgggaatgagatggggtctcagatctaggagttcctaggttgaagtcagta 33062511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 386
Target Start/End: Complemental strand, 17012511 - 17012127
Alignment:
Q  1 ttctgaagcccaacaagatttatgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcattt-gaagaatagat 99  Q
    |||| ||||| |||||| ||  |||||| ||||||||| |||||||||||||||| ||||||||||||| | ||||||||  |||||| |||||||||||    
T  17012511 ttctcaagcctaacaagtttactgacctttattgcttcagtatttaaacaagactggaagacctagagatggattcaagctatcattttgaagaatagat 17012412  T
Q  100 catctagggttttgagtctgtt-tatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaa 198  Q
    ||||||| | ||||||| |||| | |||||| ||||||||||||||||||||| |||||||||| ||||||| ||||||||  |||||||||||||| ||    
T  17012411 catctagtggtttgagtatgttatttgtgagtctttcgtgtatcatcttgatgcatgtttaggactgtgttt-gagttgtaaattgtgcactactctaaa 17012313  T
Q  199 acttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgtttgaaggtaacttcatt-tcattgtgtt 297  Q
     ||||||||||||||||||| |||| |||||||||||   ||||||||||||||  ||||||||||||||||||||||||||||||||| | ||||| ||    
T  17012312 gcttttaagcaaagagttagatagtgtgtaaactgca---aagctgtgaagtacggtgtttagttgttttgtttgaaggtaacttcattctgattgtatt 17012216  T
Q  298 tgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    |||| ||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||||||||||||    
T  17012215 tgtaatttgagaatcacaggggttgtgatcagttgtaagggaatgagatgagatctcagatccaggagttcctaggttgaagtcagtac 17012127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 1 - 386
Target Start/End: Original strand, 52436466 - 52436854
Alignment:
Q  1 ttctgaagcccaacaagattta-tgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcattt-gaagaataga 98  Q
    ||||||||||||||||  |||| ||||| |||||||||| |||||||||||||||| ||||| ||||||||  |||||||||||||||| |||||||| |    
T  52436466 ttctgaagcccaacaaagtttactgacccgtattgcttcagtatttaaacaagactggaagaactagagaatcattcaagccgtcattttgaagaatata 52436565  T
Q  99 tcatctagggttttgagtctgtt-tatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctga 197  Q
    |  | || ||||||||||||||| | |||||| ||||||||||||||||||||| |||||||| | ||||||| |||||  | ||| |||||||||||||    
T  52436566 ttgtttaaggttttgagtctgttatttgtgagtctttcgtgtatcatcttgatgcatgtttagaactgtgttt-gagttaaaatttatgcactactctga 52436664  T
Q  198 aacttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgttt-gaaggtaacttcatttcattgtgt 296  Q
    | |||||||||||||||||||||||||||||||||||||||||||| ||||| ||  |||||||||||||||||| ||||| |||||||||| |||||||    
T  52436665 agcttttaagcaaagagttaggtagtttgtaaactgcaccaaagctatgaagcacggtgtttagttgttttgttttgaaggcaacttcatttgattgtgt 52436764  T
Q  297 ttgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    |||||  |||||||||||| ||| |||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||    
T  52436765 ttgtatattgagaatcacaggggctgtgatcatttgtaagggagtgggatgagatctcagatctaggagttcctaggttgaagtcagtac 52436854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 11085309 - 11085439
Alignment:
Q  1 ttctgaagcccaacaagatttatgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcatttgaagaatagatc 100  Q
    |||||||||||||||||||| |||||| |||||||||| ||||||||||||| || ||||||||||||||  ||||||||||||||||||||||||||||    
T  11085309 ttctgaagcccaacaagattaatgacccgtattgcttcagtatttaaacaagtctggaagacctagagaaatattcaagccgtcatttgaagaatagatc 11085408  T
Q  101 atctagggttttgagtctgtttatgtgagcc 131  Q
    ||||||| |||||||||||||||||||||||    
T  11085409 atctaggattttgagtctgtttatgtgagcc 11085439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 171 - 382
Target Start/End: Complemental strand, 17038588 - 17038374
Alignment:
Q  171 tgagttgtattttgtgcactactctgaaacttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgt 270  Q
    ||||||||| ||||| ||||||||  || || | |||||  ||| ||||||||||||  ||| |||||||||||||||| ||  |||| || |  |||||    
T  17038588 tgagttgtaatttgttcactactccaaagctgtgaagcacggagataggtagtttgtgtactacaccaaagctgtgaagcacggtgtt-aggtaatttgt 17038490  T
Q  271 ttgaaggtaacttcatttcatt-----gtgtttgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggag 365  Q
    |||||||||||||||| | |||     |||||||||   ||| ||||||  ||| ||||||  |||||| ||||| |||||| |||||||||||||||||    
T  17038489 ttgaaggtaacttcatatgatttgtttgtgtttgtaacctgataatcactggggctgtgattggttgta-gggagagagatgggatctcagatctaggag 17038391  T
Q  366 ttactaggttgaagtca 382  Q
    || ||||||||||||||    
T  17038390 ttcctaggttgaagtca 17038374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 23 - 87
Target Start/End: Complemental strand, 17038716 - 17038652
Alignment:
Q  23 tgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcatt 87  Q
    |||||||||||||||| |||||||||||||||  ||||||||||||| ||| | |||||||||||    
T  17038716 tgacctgtattgcttcagtatttaaacaagacaggaagacctagagaggaactgaagccgtcatt 17038652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 378
Target Start/End: Original strand, 10340145 - 10340184
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaa 378  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  10340145 agtgagatgagatctcagatctaggagttcctaggttgaa 10340184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 382
Target Start/End: Original strand, 17379610 - 17379653
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtca 382  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||    
T  17379610 agtgagatgggatctcagatctaggagtttctaggttgaagtca 17379653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 386
Target Start/End: Original strand, 20841252 - 20841299
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    ||||||||| ||||||||||||||||||| ||||||||||||| ||||    
T  20841252 agtgagatgggatctcagatctaggagttcctaggttgaagtctgtac 20841299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 378
Target Start/End: Original strand, 47941327 - 47941366
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaa 378  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  47941327 agtgagatgagatctcagatttaggagttactaggttgaa 47941366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 170
Target Start/End: Complemental strand, 8902400 - 8902354
Alignment:
Q  124 tgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttt 170  Q
    |||||||||||| ||||||||||||||| | ||||||||||||||||    
T  8902400 tgtgagcctttcttgtatcatcttgatgcaagtttaggattgtgttt 8902354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 378
Target Start/End: Complemental strand, 1973484 - 1973445
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaa 378  Q
    ||||||||| ||||||||||||||||||| ||||||||||    
T  1973484 agtgagatgggatctcagatctaggagttcctaggttgaa 1973445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 382
Target Start/End: Original strand, 17355818 - 17355861
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtca 382  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||||    
T  17355818 agtgagatgggatctcagatctatgagttcctaggttgaagtca 17355861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 378
Target Start/End: Original strand, 17851360 - 17851399
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaa 378  Q
    ||||||||| ||||||||||||||||||| ||||||||||    
T  17851360 agtgagatgggatctcagatctaggagttcctaggttgaa 17851399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 382
Target Start/End: Original strand, 18390092 - 18390135
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtca 382  Q
    ||||||||| ||||||||||||||||||| ||| ||||||||||    
T  18390092 agtgagatgggatctcagatctaggagtttctacgttgaagtca 18390135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 378
Target Start/End: Original strand, 26972386 - 26972425
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaa 378  Q
    ||||||||| ||||||||||||||||||| ||||||||||    
T  26972386 agtgagatgggatctcagatctaggagttcctaggttgaa 26972425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 4246207 - 4246165
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||  ||||||||||||||||||| |||||||||||||    
T  4246207 agtgagataggatctcagatctaggagttcctaggttgaagtc 4246165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Original strand, 11667850 - 11667892
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    |||||||||  |||||||||||||||||| |||||||||||||    
T  11667850 agtgagatggaatctcagatctaggagttcctaggttgaagtc 11667892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Original strand, 14745770 - 14745812
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||||||||||| ||||| |||||||||||||    
T  14745770 agtgagatgtgatctcagatctaagagttcctaggttgaagtc 14745812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 24986171 - 24986129
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    |||||||||||||||||||||||  |||| |||||||||||||    
T  24986171 agtgagatgagatctcagatctataagttcctaggttgaagtc 24986129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 380
Target Start/End: Complemental strand, 8282091 - 8282050
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagt 380  Q
    ||||||||| |||||||||||||||| || ||||||||||||    
T  8282091 agtgagatgggatctcagatctaggaattcctaggttgaagt 8282050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Original strand, 23477924 - 23477961
Alignment:
Q  341 tgagatgagatctcagatctaggagttactaggttgaa 378  Q
    ||||||| ||||||||||||||||||| ||||||||||    
T  23477924 tgagatgggatctcagatctaggagttcctaggttgaa 23477961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 274; Significance: 1e-153; HSPs: 24)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 382
Target Start/End: Complemental strand, 8727352 - 8726972
Alignment:
Q  1 ttctgaagcccaacaagatttatgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcatttgaagaatagatc 100  Q
    ||||||||||||||||| ||  ||||| |||||||||| |||||||||||||| | ||||||||||||||| ||||||||||||||||||||||||||||    
T  8727352 ttctgaagcccaacaagtttactgacccgtattgcttcagtatttaaacaagattggaagacctagagaagtattcaagccgtcatttgaagaatagatc 8727253  T
Q  101 atctagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaaac 200  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||||||| ||||||| ||||||||  ||||||| ||||||||| |    
T  8727252 atctagggttttgagtttgtttatgtgagcctttcgtgtatcattttgatgcatgtttaggactgtgttt-gagttgtaaattgtgcattactctgaagc 8727154  T
Q  201 ttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgtttgaaggtaacttcatttcattgtgtttgt 300  Q
    ||||||| |||||| |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  8727153 ttttaagtaaagaggtaggtagtttgtaaactgcacctaagctgtgaagtacagtgtttagttgttttgtttgaaggtaacttcatttcattgtgtttgt 8727054  T
Q  301 agtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtca 382  Q
    |  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  8727053 aacttgagaatcacacgggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttcataggttgaagtca 8726972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 385
Target Start/End: Complemental strand, 17280397 - 17280013
Alignment:
Q  1 ttctgaagcccaacaagatttatgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcatttgaagaatagatc 100  Q
    ||||| ||||||||||| ||  ||||  |||||||||| |||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||    
T  17280397 ttctgtagcccaacaagtttactgactcgtattgcttcagtatttaaacaagactggaagacctagagaatgattcaagccgtcatttgaagaatagatc 17280298  T
Q  101 atctagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaaac 200  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||  ||||||||||||||||| |    
T  17280297 atctagggttttgagtctgtctatgtgagcctttcgtgtatcatcttgatgcatgtttaggactgtg-tttgagttgtaaattgtgcactactctgaagc 17280199  T
Q  201 ttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgtttgaaggtaacttcat-ttcattgtgtttg 299  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||| || ||||| ||||    
T  17280198 ttttaagcaaagagttaggtagtttgtaaactgcacctaagctgtgaagtacggtgtttagttgttttgtttgaaggtaacttcatattgattgtatttg 17280099  T
Q  300 tagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagta 385  Q
    |  |||||| |||| | ||| ||||||||||||||||||| ||||||| |||||||||||||| |||| |||||||||||||||||    
T  17280098 ttatttgagtatcaaaggggctgtgatcagttgtaagggactgagatgggatctcagatctagaagttcctaggttgaagtcagta 17280013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 386
Target Start/End: Complemental strand, 39081474 - 39081089
Alignment:
Q  1 ttctgaagcccaacaagattta-tgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcatttgaagaatagat 99  Q
    ||||||||||||||||| |||| | |||  ||||||||| ||||||||||||||||  ||||| |||||||| |||||| | ||||| ||||||||||||    
T  39081474 ttctgaagcccaacaagttttactaacccctattgcttcagtatttaaacaagactgaaagacttagagaagtattcaatctgtcatctgaagaatagat 39081375  T
Q  100 catctagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaaa 199  Q
    || ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||||| ||||||||  ||||||| |||||||||     
T  39081374 caactagggttttgagtctgtttatgtgagcctttcatgtatcatcttgatgcatgtttaggactgtgttt-gagttgtaaattgtgcaatactctgaag 39081276  T
Q  200 cttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgtttgaaggtaacttcatttcattgtgtttg 299  Q
    |||||||||||||||||||||||||| |||| |||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||    
T  39081275 cttttaagcaaagagttaggtagtttataaattgcacctaagctgtgaagtacggtgtttagttgttttgtttgaaggtaacttcatttcattgtatttg 39081176  T
Q  300 tagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    || ||||||||||| | ||| ||||||||||||||||| ||||||||| |||||||||||||| |||| ||||||||||||||||||    
T  39081175 taatttgagaatcataggggctgtgatcagttgtaaggtagtgagatgggatctcagatctagtagttcctaggttgaagtcagtac 39081089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 1 - 386
Target Start/End: Original strand, 37155173 - 37155560
Alignment:
Q  1 ttctgaagcccaacaagattta-tgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcattt-gaagaataga 98  Q
    ||||||||||||||||| |||| ||||| ||||||||||  ||||||||||||||| ||||||||| ||||| |||||||||||||||| ||||||||||    
T  37155173 ttctgaagcccaacaagttttactgacccgtattgcttcaatatttaaacaagactggaagacctaaagaagtattcaagccgtcattttgaagaataga 37155272  T
Q  99 tcatctagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaa 198  Q
    ||||||||| |||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||| |||| |||||||||||||    
T  37155273 tcatctaggattttgagtctatttatgttagcctttcgtgtatcatcttgatgcatgtttaggattgtgttt-gagttgtaatttgggcactactctgaa 37155371  T
Q  199 acttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgtttgaaggtaacttca-tttcattgtgtt 297  Q
     |||||||||||||||||||||||||||||||||||||| ||| |||||||||   ||||||||||||||||||||||||||||| | ||| ||||| ||    
T  37155372 gcttttaagcaaagagttaggtagtttgtaaactgcacctaagttgtgaagtattgtgtttagttgttttgtttgaaggtaactttattttgattgtatt 37155471  T
Q  298 tgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    ||   |||||| |||||| | ||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||||||    
T  37155472 tgctatttgagtatcacaggcgttgtgatcagttgtaagggagtgagatgggatctcagatcttggagttcctaggttgaagtcagtac 37155560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 5 - 386
Target Start/End: Original strand, 17880391 - 17880774
Alignment:
Q  5 gaagcccaacaagatttatgacctgtattgcttcggtatttaaacaagactagaagacctagagaag-aattcaagccgtcatttgaagaatagatcatc 103  Q
    ||||||||||||  ||  ||||| |||||||||| ||||||||| |||||| ||||||||||||||  |||||||||||||||||||||||||||||||     
T  17880391 gaagcccaacaattttactgacccgtattgcttcagtatttaaataagactggaagacctagagaattaattcaagccgtcatttgaagaatagatcatg 17880490  T
Q  104 tagggttttgagtctgtt-tatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaaactt 202  Q
    |||| ||||||||||||| | |||||||||||||||||||||||| ||| |||||||||| ||||||| ||||||||  |||||||||||||  || |||    
T  17880491 taggattttgagtctgttatttgtgagcctttcgtgtatcatcttaatgcatgtttaggactgtgttt-gagttgtaaattgtgcactactccaaagctt 17880589  T
Q  203 ttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgttt-gaaggtaacttcatttcattgtgtttgta 301  Q
    ||||  ||||||||||||||||||| ||||||||||||||||||||||||  ||||||||| |||||||| |||||||| ||||||| ||||| ||||||    
T  17880590 ttaattaaagagttaggtagtttgtgaactgcaccaaagctgtgaagtacggtgtttagttattttgttttgaaggtaaattcatttgattgtatttgta 17880689  T
Q  302 gtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
     ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17880690 atttgagaatcacaggggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttcctaggttgaagtcagtac 17880774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 386
Target Start/End: Original strand, 33465808 - 33466195
Alignment:
Q  1 ttctgaagcccaacaagattta-tgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcattt-gaagaataga 98  Q
    ||||||||||||||||  | || ||||| |||||||||| |||||||||||||||| ||||||||| ||||  |||||| ||||||||| ||||||||||    
T  33465808 ttctgaagcccaacaaagtgtactgacccgtattgcttcagtatttaaacaagactggaagacctaaagaattattcaaaccgtcattttgaagaataga 33465907  T
Q  99 tcatctagggttttgagtctgtt-tatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctga 197  Q
    |  | ||||||||||||| |||| | |||||||||||||| ||||||||||||| |||||||||| ||||||| |||||||| |||||||||||||| ||    
T  33465908 ttgtttagggttttgagtttgttatttgtgagcctttcgtatatcatcttgatgcatgtttaggactgtgttt-gagttgtaatttgtgcactactccga 33466006  T
Q  198 aacttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgtt-tgaaggtaacttcatttcattgtgt 296  Q
    | ||||||||||||||||||||||||||||||||| |||||||||||||||| ||  || |||||||||||||| ||||||||||||||||| |||||||    
T  33466007 agcttttaagcaaagagttaggtagtttgtaaactacaccaaagctgtgaagcacggtgattagttgttttgttctgaaggtaacttcatttgattgtgt 33466106  T
Q  297 ttgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
     | || | ||||||||||| ||| |||||| | |||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||    
T  33466107 ctataatctgagaatcacaggggctgtgattatttgtaagggagtgagatg-ggtctcagatctaggagttcctaggttgaagtcagtac 33466195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 22876524 - 22876365
Alignment:
Q  1 ttctgaagcccaacaagatt-ta-tgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtca-tttgaagaatag 97  Q
    |||||||||||||||||| | || ||||| ||||||||||||||||||||||||||| ||||||||||||||  ||||||||||||| ||||| ||||||    
T  22876524 ttctgaagcccaacaagagtgtactgacc-gtattgcttcggtatttaaacaagactggaagacctagagaatcattcaagccgtcattttgaggaatag 22876426  T
Q  98 atcatctagggttttgagtctgtt-tatgtgagcctttcgtgtatcatcttgatgtatgtt 157  Q
    ||  | ||||||||||||| |||| | |||||||||||| |||||| |||||||| |||||    
T  22876425 attgtttagggttttgagtatgttatttgtgagcctttcttgtatcctcttgatgcatgtt 22876365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 23250240 - 23250077
Alignment:
Q  1 ttctgaagcccaacaagat-ttatgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcatttgaagaatagat 99  Q
    |||||||||||||||| |  |||| ||| ||||| ||||  ||| |||||||||||| |||||||| |  ||||||||| ||||| |||||||  |||||    
T  23250240 ttctgaagcccaacaacaagttataacccgtatttcttcaatatgtaaacaagactacaagacctaaatcagaattcaatccgtc-tttgaagtttagat 23250142  T
Q  100 catctagggttttgagtctgt-tta--tgtgagcctttcgtgtatcatcttgatgtatgtttagga 162  Q
    | | ||||||||||||||| | |||  |||||||||||||||||||| ||||||| ||||| ||||    
T  23250141 ctt-tagggttttgagtctctgttaattgtgagcctttcgtgtatcaccttgatgcatgttaagga 23250077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 124 - 382
Target Start/End: Complemental strand, 1684367 - 1684103
Alignment:
Q  124 tgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttt---tgagttgtattttgtgcactactctgaaacttttaagcaaagagttaggt 220  Q
    |||||||||||| ||||||| ||||||  ||||| |||| ||||||    ||||||||| ||||| ||||||||  || || | |||||   || |||||    
T  1684367 tgtgagcctttcttgtatcaccttgatacatgttaaggactgtgttacactgagttgtaatttgttcactactccaaagctgtgaagcacgtagataggt 1684268  T
Q  221 agtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgtttgaaggtaacttcatttcatt-----gtgtttgtagtttgagaatcaca 315  Q
    |||||||  ||| ||||||| |||||||| ||  |||| || |  ||||||||||||||| ||||| | |||     |||||||||   ||| ||| |||    
T  1684267 agtttgtgtactacaccaaaactgtgaagcacggtgtt-aggtaatttgtttgaaggtaatttcatctgatttatttgtgtttgtaacctgataattaca 1684169  T
Q  316 agggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtca 382  Q
     ||| ||||||  |||||| |||||||||||| ||||||||| |||||||||  |||||||||||||    
T  1684168 ggggatgtgattggttgta-gggagtgagatgggatctcagaactaggagttcttaggttgaagtca 1684103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 386
Target Start/End: Complemental strand, 12240413 - 12240366
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    |||||||||||||||||| |||||||||| ||||| ||||||||||||    
T  12240413 agtgagatgagatctcaggtctaggagttcctaggctgaagtcagtac 12240366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 381
Target Start/End: Original strand, 13660359 - 13660402
Alignment:
Q  338 gagtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    |||||||||| ||||||||||||||||||| |||||||||||||    
T  13660359 gagtgagatgggatctcagatctaggagttcctaggttgaagtc 13660402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 338 - 381
Target Start/End: Original strand, 13719002 - 13719045
Alignment:
Q  338 gagtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    |||||||||| ||||||||||||||||||| |||||||||||||    
T  13719002 gagtgagatgggatctcagatctaggagttcctaggttgaagtc 13719045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 382
Target Start/End: Complemental strand, 23249906 - 23249863
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtca 382  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||    
T  23249906 agtgagatgggatctcagatctaggagttcctaggttgaagtca 23249863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 382
Target Start/End: Original strand, 23864455 - 23864498
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtca 382  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||    
T  23864455 agtgagatgggatctcagatctaggagttcctaggttgaagtca 23864498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 381
Target Start/End: Original strand, 11221260 - 11221302
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  11221260 agtgagatgggatctcagatctaggagttcctaggttgaagtc 11221302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 386
Target Start/End: Original strand, 1562355 - 1562402
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    ||||||||| |||||||||| ||||||||  |||||||||||||||||    
T  1562355 agtgagatgggatctcagatgtaggagtttttaggttgaagtcagtac 1562402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 378
Target Start/End: Complemental strand, 24092128 - 24092089
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaa 378  Q
    ||||||||| ||||||||||||||||||| ||||||||||    
T  24092128 agtgagatgggatctcagatctaggagttcctaggttgaa 24092089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Original strand, 20254863 - 20254905
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||| ||||||||||||||| |||||||||||||    
T  20254863 agtgagatgggatgtcagatctaggagttcctaggttgaagtc 20254905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 22476402 - 22476360
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||||| ||||||||||| |||||||||||||    
T  22476402 agtgagatgggatctcaaatctaggagttcctaggttgaagtc 22476360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 22485305 - 22485263
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| |||||||||||||||||||  ||||||||||||    
T  22485305 agtgagatgggatctcagatctaggagttcttaggttgaagtc 22485263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Original strand, 27925434 - 27925476
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||||||||||||||||| ||||| |||||||    
T  27925434 agtgagatgggatctcagatctaggagttcctaggatgaagtc 27925476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 342 - 380
Target Start/End: Complemental strand, 33961909 - 33961871
Alignment:
Q  342 gagatgagatctcagatctaggagttactaggttgaagt 380  Q
    |||||| ||||||||||||||||||| ||||||||||||    
T  33961909 gagatgggatctcagatctaggagttcctaggttgaagt 33961871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 45136286 - 45136244
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||||| ||||||||||| |||||||||||||    
T  45136286 agtgagatgggatctcatatctaggagttcctaggttgaagtc 45136244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 380
Target Start/End: Complemental strand, 33977229 - 33977188
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagt 380  Q
    |||||||||| |||||||||||||||||| |||| |||||||    
T  33977229 agtgagatgatatctcagatctaggagttcctagattgaagt 33977188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 264; Significance: 1e-147; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 386
Target Start/End: Original strand, 48797268 - 48797653
Alignment:
Q  1 ttctgaagcccaacaagatttatgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcattt-gaagaatagat 99  Q
    |||||||| |||||||| ||  ||||| |||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||| |||||||||||    
T  48797268 ttctgaagtccaacaagtttactgacccgtattgcttcagtatttaaacaagactggaagacctagagaagcattcaagccgtcattttgaagaatagat 48797367  T
Q  100 catctagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaaa 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||  |||||||||||||||||     
T  48797368 catctagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatgcatgtttaggactgtgttt-gagttgtaaattgtgcactactctgaag 48797466  T
Q  200 cttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgtttgaaggtaacttca-tttcattgtgttt 298  Q
    |||||||||||||| |||| ||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||| ||| ||||| |||    
T  48797467 cttttaagcaaagatttagctagtttgtaaactgcgccaaagctgtgaagtacggtgtttagttgttttgtttgaaggtaacttcattttgattgtattt 48797566  T
Q  299 gtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    ||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  48797567 gtaatttgagaatcacaggggttgtgatcagttgtaagggagtga-atgagatctcagatctaggagttcctaggttgaagtcagtac 48797653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 1 - 386
Target Start/End: Complemental strand, 7620590 - 7620204
Alignment:
Q  1 ttctgaagcccaacaagatttatgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcatttgaagaatagatc 100  Q
    |||||||||||||||||||| |||||  |||||||||  |||||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||    
T  7620590 ttctgaagcccaacaagattaatgactcgtattgctttagtatttaaacaagactggaagacctagagaagtattcaagtcgtcatttgaagaatagatc 7620491  T
Q  101 atctagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaaac 200  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| || | |||||||||||  |||||||||||||||||      
T  7620490 atctagggttttgagtctgtttatgtgaccctttcgtgtatcatcttgatgcatgtttaggactgag-tttgagttgtaaattgtgcactactctgaagt 7620392  T
Q  201 ttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttt--tgtttgaaggtaacttcatttcattgtgttt 298  Q
    |||||||||||||||||||||||||  |||||||||||||| ||||||||||  |||||||||||||  ||||||||||||||||||||| |||||||||    
T  7620391 ttttaagcaaagagttaggtagtttaaaaactgcaccaaagttgtgaagtacggtgtttagttgttttgtgtttgaaggtaacttcattttattgtgttt 7620292  T
Q  299 gtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    ||| ||| ||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||    
T  7620291 gtaatttaagaatcataggggttgtgatcagttgtaagggagtgagatgggatctcagatctaggagttcctaggttgaagttagtac 7620204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 386
Target Start/End: Complemental strand, 14975941 - 14975556
Alignment:
Q  1 ttctgaagcccaacaagattta-tgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcatttgaagaatagat 99  Q
    ||||||||||||||||| |||| ||||| ||||||||||  ||||||||||||||| ||||||||||||||  |||||||||||||| ||||||||||||    
T  14975941 ttctgaagcccaacaagttttactgacccgtattgcttcaatatttaaacaagactggaagacctagagaatgattcaagccgtcatctgaagaatagat 14975842  T
Q  100 catctagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaaa 199  Q
    |||||||||||||||||  ||||||||||| ||||||||||||||||| ||| |||||||||| || |||| ||||||||  |||||||||||||||||     
T  14975841 catctagggttttgagt--gtttatgtgagtctttcgtgtatcatcttaatgcatgtttaggactgagttt-gagttgtaaattgtgcactactctgaag 14975745  T
Q  200 cttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgt--ttgaaggtaacttcatttcattgtgtt 297  Q
    |||||||| |||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||||  |||||||||||||||||| ||||||||    
T  14975744 cttttaagaaaagagttaggttgtttgtaaactgcaccaaagctgtgaagtacggtgtttagttgttttgtgtttgaaggtaacttcattttattgtgtt 14975645  T
Q  298 tgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    |||| ||||||||||||  |||  ||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  14975644 tgtaatttgagaatcactggggcagtgatcatttgtaagggagtgagatgggatctcagatctaggagttcctaggttgaagtcagtac 14975556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 1 - 386
Target Start/End: Complemental strand, 15405417 - 15405032
Alignment:
Q  1 ttctgaagcccaacaagattta-tgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcatttgaagaatagat 99  Q
    ||||||||||||||||| |||| ||||| ||||||||||  ||||||||||||||| ||||||||||||||  |||||||||||||| ||||||||||||    
T  15405417 ttctgaagcccaacaagttttactgacccgtattgcttcaatatttaaacaagactggaagacctagagaatgattcaagccgtcatctgaagaatagat 15405318  T
Q  100 catctagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaaa 199  Q
    |||||||||||||||||  ||||||||||| ||||||||||||||||| ||| |||||||||| || |||| ||||||||  |||||||||||||||||     
T  15405317 catctagggttttgagt--gtttatgtgagtctttcgtgtatcatcttaatgcatgtttaggactgagttt-gagttgtaaattgtgcactactctgaag 15405221  T
Q  200 cttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgt--ttgaaggtaacttcatttcattgtgtt 297  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||  |||||||||||||||||| ||||||||    
T  15405220 cttttaagaaaagagttagatagtttgtaaactgcaccaaagctgtgaagtacggtgtttagttgttttgtgtttgaaggtaacttcattttattgtgtt 15405121  T
Q  298 tgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    |||| ||||||||||||  |||  ||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  15405120 tgtaatttgagaatcactggggcagtgatcatttgtaagggagtgagatgggatctcagatctaggagttcctaggttgaagtcagtac 15405032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 386
Target Start/End: Complemental strand, 14985179 - 14984795
Alignment:
Q  1 ttctgaagcccaacaagattta-tgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcatttgaagaatagat 99  Q
    ||||||||||||||||| |||| ||||| |||||||||| |||||||||||||| | ||||||||||||||  |||||||| ||||| ||||||||| ||    
T  14985179 ttctgaagcccaacaagttttactgacccgtattgcttcagtatttaaacaaga-tggaagacctagagaatgattcaagctgtcatctgaagaatatat 14985081  T
Q  100 catctagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaaa 199  Q
     ||||||||||||||||  ||||||||||||||||||||||||||||| ||| |||||||||| || |||| ||||||||  |||||||||||||||||     
T  14985080 tatctagggttttgagt--gtttatgtgagcctttcgtgtatcatcttaatgcatgtttaggactgagttt-gagttgtaaattgtgcactactctgaag 14984984  T
Q  200 cttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgt--ttgaaggtaacttcatttcattgtgtt 297  Q
    |||||| |||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||  |||||||||||||||||| ||||||||    
T  14984983 cttttacgcaaagagttagttagtttgtaaactgcaccaaagttgtgaagtacgatgtttagttgttttgtgtttgaaggtaacttcattttattgtgtt 14984884  T
Q  298 tgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    |||| ||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||| || ||||||||||||||||||    
T  14984883 tgtaatttgagaatcacaggggttgtgatcagttgtaagggcgtgagatgggatctcagatctaggaattcctaggttgaagtcagtac 14984795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 386
Target Start/End: Complemental strand, 15414790 - 15414406
Alignment:
Q  1 ttctgaagcccaacaagattta-tgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcatttgaagaatagat 99  Q
    ||||||||||||||||| |||| ||||| |||||||||| |||||||||||||| | ||||||||||||||  |||||||| ||||| ||||||||| ||    
T  15414790 ttctgaagcccaacaagttttactgacccgtattgcttcagtatttaaacaaga-tggaagacctagagaatgattcaagctgtcatctgaagaatatat 15414692  T
Q  100 catctagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaaa 199  Q
     ||||||||||||||||  ||||||||||||||||||||||||||||| ||| |||||||||| || |||| ||||||||  |||||||||||||||||     
T  15414691 tatctagggttttgagt--gtttatgtgagcctttcgtgtatcatcttaatgcatgtttaggactgagttt-gagttgtaaattgtgcactactctgaag 15414595  T
Q  200 cttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgt--ttgaaggtaacttcatttcattgtgtt 297  Q
    |||||| |||||||||||| |||||||||||||||||||||| |||||||||| |||||||||||||||||  |||||||||||||||||| ||||||||    
T  15414594 cttttacgcaaagagttagttagtttgtaaactgcaccaaagttgtgaagtacgatgtttagttgttttgtgtttgaaggtaacttcattttattgtgtt 15414495  T
Q  298 tgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    |||| ||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||| || ||||||||||||||||||    
T  15414494 tgtaatttgagaatcacaggggttgtgatcagttgtaagggcgtgagatgggatctcagatctaggaattcctaggttgaagtcagtac 15414406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 1 - 386
Target Start/End: Complemental strand, 11629148 - 11628764
Alignment:
Q  1 ttctgaagcccaacaagatttatgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcattt-gaagaatagat 99  Q
    |||| |||||||||||| ||  ||||| |||||||||| |||||||||||| ||| ||||||||| ||||  |||||||||||||||| |||||||||||    
T  11629148 ttctaaagcccaacaagtttactgacccgtattgcttcagtatttaaacaaaactggaagacctaaagaattattcaagccgtcattttgaagaatagat 11629049  T
Q  100 catctagggttttgagtctgtt-tatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaa 198  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||| | |||||||||| ||||||| ||||||||  |||||||||||||||||    
T  11629048 catctagggttttgagtctgttatttgtgagcctttcgtgtatcatcttgaagcatgtttaggactgtgttt-gagttgtaaattgtgcactactctgaa 11628950  T
Q  199 acttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgtttgaaggtaacttcatttcattgtgttt 298  Q
     ||||||||||||||||||||||||||||||| |||||||||||||||||||||  || ||||||  ||||||||||||||||||||||| ||||| |||    
T  11628949 gcttttaagcaaagagttaggtagtttgtaaagtgcaccaaagctgtgaagtacggtgattagtt--tttgtttgaaggtaacttcatttgattgttttt 11628852  T
Q  299 gtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    ||| ||||||||||||| |||||||||||||||||||||||||||| || |||||  |||||||||||| ||||| ||||||||||||    
T  11628851 gtattttgagaatcacaggggttgtgatcagttgtaagggagtgaggtgggatcttcgatctaggagttcctaggctgaagtcagtac 11628764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 1 - 325
Target Start/End: Complemental strand, 30226578 - 30226253
Alignment:
Q  1 ttctgaagcccaacaagatttatgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcattt-gaagaatagat 99  Q
    ||||||||| |||||||  |  ||||||||||||| || ||||||||||||||||  || || | |||||  |||||||| ||||||| |||||||||||    
T  30226578 ttctgaagctcaacaagtctactgacctgtattgcctcagtatttaaacaagactgtaacacttggagaattattcaagctgtcattttgaagaatagat 30226479  T
Q  100 catctagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaaa 199  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||| |||||||| ||||||||||||||||||     
T  30226478 catcaagggttttgagtctgtttatgtgagcctttcgtgtatcaccttgatgcatgtttaggactgtgttt-gagttgtaatttgtgcactactctgaag 30226380  T
Q  200 cttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgtttgaaggtaacttca-tttcattgtgttt 298  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||| || ||||||||| ||| ||||| |||    
T  30226379 cttttaagtaaagagttaggtagtttgtaaactgcaccaaagctgtgaagcacgatgttcagttgttttgtttaaatgtaacttcattttgattgtattt 30226280  T
Q  299 gtagtttgagaatcacaagggttgtga 325  Q
    ||  |||||| |||||| |||||||||    
T  30226279 gttatttgagtatcacatgggttgtga 30226253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 1 - 282
Target Start/End: Original strand, 12560862 - 12561144
Alignment:
Q  1 ttctgaagcccaacaagatttatgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtca--tttgaagaataga 98  Q
    ||||||||||||||||| ||  ||||| ||||| |||| |||| ||||||||| | ||||||||||||||| |||||||||||||  |||||||||||||    
T  12560862 ttctgaagcccaacaagtttactgacccgtattacttcagtatataaacaagattggaagacctagagaagtattcaagccgtcaaatttgaagaataga 12560961  T
Q  99 tcatctagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaa 198  Q
    ||||||||| |||||||||| |||||||||||||||||||||||||||| ||| |||||||||| | ||||| ||||||||  |||||||||||||||||    
T  12560962 tcatctaggattttgagtctatttatgtgagcctttcgtgtatcatctttatgcatgtttaggactatgttt-gagttgtaaattgtgcactactctgaa 12561060  T
Q  199 acttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgtttgaaggtaact 282  Q
    | |||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||||||| ||| |||||||||    
T  12561061 aattttaagcaaagagttaggtagtttgtaaactacaccaaagttgtgaagtacgatgtttagttgttttatttaaaggtaact 12561144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 29 - 382
Target Start/End: Complemental strand, 24049932 - 24049578
Alignment:
Q  29 gtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcatttgaagaatagatcatctagggttttgagtctgtt-tatgtg 127  Q
    |||||||||| ||||||||||||||||  ||||||||    |  |||||||||||||||||||  ||||||||| || ||||||||||||||| | ||||    
T  24049932 gtattgcttcagtatttaaacaagactgcaagacctaattcattattcaagccgtcatttgaaatatagatcatttaaggttttgagtctgttctttgtg 24049833  T
Q  128 agcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaaacttttaagcaaagagttaggtagtttgt 227  Q
    ||||||||||||||||| |||||| ||| |||||| ||||||| |||||||||||||| |||| ||||||| || | ||||||| |||||||||||||||    
T  24049832 agcctttcgtgtatcattttgatgcatgcttaggactgtgttt-gagttgtattttgttcacttctctgaagctgtgaagcaaaaagttaggtagtttgt 24049734  T
Q  228 aaactgcaccaaagctgtgaagtacaatgtttag-ttgttttgtttgaaggtaacttca--tttcattgtgtttgtagtttgagaatcacaagggttgtg 324  Q
      ||| |||||||||| ||||| ||  | | ||| ||||||  ||||||||||||||||  ||| ||||||| ||||   ||||||||||| ||| ||||    
T  24049733 gtactacaccaaagctatgaagcacggt-tgtagattgtttgttttgaaggtaacttcaactttgattgtgtctgtaaactgagaatcacaggggctgtg 24049635  T
Q  325 atcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtca 382  Q
    || | |||| ||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  24049634 attatttgt-agggagtgagatgtgatctcagatctaggagttcctaggttgaagtca 24049578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 3285951 - 3286110
Alignment:
Q  1 ttctgaagcccaacaagatttatgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcatttgaagaatagatc 100  Q
    ||||||||||||||||| ||  |||| ||||||| ||| |||||||||||||||| ||||||||||||| ||||| ||||||| |||| |||||||||||    
T  3285951 ttctgaagcccaacaagtttactgacttgtattgtttcagtatttaaacaagactggaagacctagagaggaattgaagccgtaatttcaagaatagatc 3286050  T
Q  101 atctagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatgtatgtttag 160  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  3286051 atctagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatgcatgtttag 3286110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 228 - 386
Target Start/End: Original strand, 3290559 - 3290718
Alignment:
Q  228 aaactgcaccaaagctgtgaagtacaatgtttagttgttttgtttgaaggtaacttcatttc-attgtgtttgtagtttgagaatcacaagggttgtgat 326  Q
    |||||||||| ||||||||||||||  | ||||||||||||||||||||||||||||||||  ||||| ||||   |||||| |||||| ||| ||||||    
T  3290559 aaactgcacctaagctgtgaagtacggtatttagttgttttgtttgaaggtaacttcattttgattgtatttgctatttgagtatcacaggggctgtgat 3290658  T
Q  327 cagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  3290659 cagttgtaagggagtgaaatgagatctcagatctaggagttcctaggttgaagtcagtac 3290718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 77 - 382
Target Start/End: Original strand, 11560228 - 11560536
Alignment:
Q  77 aagccgtcatttgaagaatagatcatctagggttttgagtctgtt-tatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagt 175  Q
    |||||||||||||||||||||||||| |||| |||| |||||||  | ||| |||||||||||||||||||||||| |||||||||| |||| |||||||    
T  11560228 aagccgtcatttgaagaatagatcatttaggtttttcagtctgtaatttgttagcctttcgtgtatcatcttgatgaatgtttaggactgtg-tttgagt 11560326  T
Q  176 tgtattttgtgcactactctgaaactt-ttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttg-tttg 273  Q
    |||| ||| ||||||||| | ||| || | ||||||||||||||| ||||||   ||  ||| |||| ||||||| |   ||||  |  | |||| |||     
T  11560327 tgtaatttatgcactact-taaaagttgtgaagcaaagagttaggcagtttgagtaccacacaaaaggtgtgaagcatggtgttaggaagatttgttttt 11560425  T
Q  274 aaggtaacttcat--ttcattgtgtttgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttacta 371  Q
    |||||||||||||  ||  |||| | ||| ||||||||||||||  || |||||| | ||| |||||||||||||||||| ||||||| ||||||| |||    
T  11560426 aaggtaacttcatcgttatttgtatctgttgtttgagaatcacagaggctgtgattatttgcaagggagtgagatgagatatcagatccaggagttccta 11560525  T
Q  372 ggttgaagtca 382  Q
    |||||||||||    
T  11560526 ggttgaagtca 11560536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 309 - 386
Target Start/End: Complemental strand, 42782957 - 42782880
Alignment:
Q  309 aatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    ||||||| ||| ||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42782957 aatcacaggggctgtgattggttgtaagggagtgagatgagatctcagatctaggagttcctaggttgaagtcagtac 42782880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 137 - 382
Target Start/End: Complemental strand, 9564634 - 9564383
Alignment:
Q  137 tgtatcatcttgatgtatgtttaggattgtgtt---ttgagttgtattttgtgcactactctgaaacttttaagcaaagagttaggtagtttgtaaactg 233  Q
    ||||||| ||||||  ||||| |||||||||||   || ||||||| ||||| ||||||||  ||  | | |||||  ||| ||||||||||||  |||     
T  9564634 tgtatcaccttgatacatgttaaggattgtgttacattaagttgtaatttgttcactactcctaagttgtgaagcacggagataggtagtttgtgtacta 9564535  T
Q  234 caccaaagctgtgaagtacaatgtttagttgttttgtttgaaggtaacttcatttcatt-----gtgtttgtagtttgagaatcacaagggttgtgatca 328  Q
    |||||||||||||||| || |||||  || |||| |||||||||||||||||| | |||     |||||||||   ||| ||||||  ||| ||||||      
T  9564534 caccaaagctgtgaagcacgatgttaggtagttt-gtttgaaggtaacttcatctgatttgtttgtgtttgtaacctgataatcaccggggatgtgattg 9564436  T
Q  329 gttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtca 382  Q
    |||||| |||||||||||| ||||||||||||||||||| ||||||||||||||    
T  9564435 gttgta-gggagtgagatgggatctcagatctaggagttcctaggttgaagtca 9564383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 104 - 378
Target Start/End: Complemental strand, 9567317 - 9567036
Alignment:
Q  104 tagggttttgagtc--tgtttatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgtt---ttgagttgtattttgtgcactactctgaa 198  Q
    ||||||||||||||  |||| || |||| ||||| ||||||| ||||||  ||||| |||||| ||||   || ||||||| ||||| ||||||||  ||    
T  9567317 tagggttttgagtcattgttaat-tgagtctttcttgtatcaccttgatacatgttaaggattatgttacattaagttgtaatttgttcactactccaaa 9567219  T
Q  199 acttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgtttgaaggtaacttcatttcatt-----g 293  Q
     || | |||||  ||| ||||||||||||  ||| |||||||||||||||| ||  ||||  || |||| |||||||| ||||||||| | |||     |    
T  9567218 gctgtgaagcatggagataggtagtttgtgtactacaccaaagctgtgaagcacggtgttaggtagttt-gtttgaagttaacttcatctgatttgtttg 9567120  T
Q  294 tgtttgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaa 378  Q
    ||||||||   ||| ||||||| ||||||||||  |||||| |||||||||||| ||||||||||||| ||||| ||||||||||    
T  9567119 tgtttgtaacctgataatcacaggggttgtgattggttgta-gggagtgagatgggatctcagatctatgagttcctaggttgaa 9567036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 156 - 233
Target Start/End: Original strand, 3288349 - 3288425
Alignment:
Q  156 tttaggattgtgttttgagttgtattttgtgcactactctgaaacttttaagcaaagagttaggtagtttgtaaactg 233  Q
    ||||||| ||||||| |||||||| ||||||||||||| |||| |||||||| |||||| ||||||||||||||||||    
T  3288349 tttaggactgtgttt-gagttgtaatttgtgcactactatgaagcttttaagtaaagaggtaggtagtttgtaaactg 3288425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 124 - 367
Target Start/End: Original strand, 4794353 - 4794602
Alignment:
Q  124 tgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgtt---ttgagttgtattttgtgcactactctgaaacttttaagcaaagagttaggt 220  Q
    |||||||||||| ||||||| |||||   |||||  ||| ||||||   |||||||||| ||||| ||||||||  || || | || ||  ||| |||||    
T  4794353 tgtgagcctttcttgtatcaccttgagacatgttacggactgtgttacattgagttgtaatttgttcactactccaaagctgtgaaacacggagataggt 4794452  T
Q  221 agtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgtttgaaggtaacttcatttcatt-----gtgtttgtagtttgagaatcaca 315  Q
    |||||||  ||| |||||||||||||||| || | |||  || |||| ||||||||||||||| || | |||     |||||||||   ||| |||||||    
T  4794453 agtttgtgtactacaccaaagctgtgaagcacgacgttaggtagttt-gtttgaaggtaacttaatctgatttgtttgtgtttgtaacctgataatcaca 4794551  T
Q  316 agggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagtt 367  Q
     ||| ||||||  |||||| |||||||||||| |||||||||||||||||||    
T  4794552 ggggctgtgattggttgta-gggagtgagatgcgatctcagatctaggagtt 4794602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 381
Target Start/End: Complemental strand, 24902306 - 24902234
Alignment:
Q  309 aatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||||||||||||   ||||| |  ||||||||| ||||||||||||||||||| |||||||||||||    
T  24902306 aatcacaagggttgtgattgattgtaggatagtgagatgggatctcagatctaggagttcctaggttgaagtc 24902234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 340 - 386
Target Start/End: Complemental strand, 30226256 - 30226210
Alignment:
Q  340 gtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||    
T  30226256 gtgagatgggatctcagatctaggagttcctaggttgaagtcagtac 30226210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 339 - 385
Target Start/End: Original strand, 31269044 - 31269090
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtcagta 385  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||    
T  31269044 agtgagatgagatctcagatctaggagttcctaggttgaaatcagta 31269090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 382
Target Start/End: Complemental strand, 7508605 - 7508562
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtca 382  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||    
T  7508605 agtgagatgggatctcagatctaggagttcctaggttgaagtca 7508562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 382
Target Start/End: Original strand, 9894054 - 9894097
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtca 382  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||    
T  9894054 agtgagatgggatctcagatctaggagttcctaggttgaagtca 9894097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 382
Target Start/End: Complemental strand, 23296674 - 23296631
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtca 382  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||    
T  23296674 agtgagatgggatctcagatctaggagttcctaggttgaagtca 23296631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 342 - 381
Target Start/End: Complemental strand, 23957045 - 23957006
Alignment:
Q  342 gagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  23957045 gagatgagatctcagatctaggagttcctaggttgaagtc 23957006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 378
Target Start/End: Original strand, 26132903 - 26132942
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaa 378  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  26132903 agtgagatgagatctcagatctaggagttcctaggttgaa 26132942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 378
Target Start/End: Complemental strand, 42636418 - 42636379
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaa 378  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  42636418 agtgagatgagatctcagatctaggagttcctaggttgaa 42636379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 4458911 - 4458869
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  4458911 agtgagatgggatctcagatctaggagttcctaggttgaagtc 4458869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 381
Target Start/End: Original strand, 13455099 - 13455141
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  13455099 agtgagatgggatctcagatctaggagttcctaggttgaagtc 13455141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 14165337 - 14165295
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  14165337 agtgagatgtgatctcagatctaggagttcctaggttgaagtc 14165295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 385
Target Start/End: Complemental strand, 14687538 - 14687492
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtcagta 385  Q
    |||||||||  |||||||||||||||||| |||||||||||||||||    
T  14687538 agtgagatggaatctcagatctaggagttcctaggttgaagtcagta 14687492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 4547558 - 4547626
Alignment:
Q  104 tagggttttgagtctgttta--tgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttt 170  Q
    |||||||||||||||||||   |||||| ||||||||||||| ||||||| ||||| ||||||| ||||    
T  4547558 tagggttttgagtctgtttcattgtgagtctttcgtgtatcaccttgatgcatgttaaggattgagttt 4547626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 339 - 380
Target Start/End: Original strand, 20588695 - 20588736
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagt 380  Q
    |||||||||||||||||||||||||||||  |||||||||||    
T  20588695 agtgagatgagatctcagatctaggagttcttaggttgaagt 20588736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 341 - 381
Target Start/End: Complemental strand, 11999049 - 11999009
Alignment:
Q  341 tgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||| ||||||||||||||||||| |||||||||||||    
T  11999049 tgagatgggatctcagatctaggagttcctaggttgaagtc 11999009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 378
Target Start/End: Complemental strand, 645305 - 645266
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaa 378  Q
    ||||||||| ||||||||||||||||||| ||||||||||    
T  645305 agtgagatgggatctcagatctaggagttcctaggttgaa 645266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 378
Target Start/End: Complemental strand, 10661034 - 10660995
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaa 378  Q
    ||||||||| ||||||||||||||||||| ||||||||||    
T  10661034 agtgagatgggatctcagatctaggagttcctaggttgaa 10660995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 382
Target Start/End: Complemental strand, 15708342 - 15708299
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtca 382  Q
    ||||||||| ||||||||||||||||||| ||||||| ||||||    
T  15708342 agtgagatgggatctcagatctaggagttcctaggttcaagtca 15708299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 386
Target Start/End: Original strand, 20596812 - 20596859
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    ||||| ||| ||||||||||||||||||| |||||||||||| |||||    
T  20596812 agtgatatgggatctcagatctaggagttcctaggttgaagttagtac 20596859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 386
Target Start/End: Complemental strand, 23057377 - 23057330
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    ||||||||||||||||| ||||||||||| || || ||||||||||||    
T  23057377 agtgagatgagatctcaaatctaggagttcctcggctgaagtcagtac 23057330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Original strand, 7586517 - 7586559
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||| ||||||||||||| |||||||||||||    
T  7586517 agtgagatgggatcttagatctaggagtttctaggttgaagtc 7586559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Original strand, 10038715 - 10038757
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| |||||||||||||||||||  ||||||||||||    
T  10038715 agtgagatgggatctcagatctaggagttcttaggttgaagtc 10038757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 382
Target Start/End: Original strand, 11406938 - 11406980
Alignment:
Q  340 gtgagatgagatctcagatctaggagttactaggttgaagtca 382  Q
    ||||||||  |||||||||||||||||| ||||||||||||||    
T  11406938 gtgagatggaatctcagatctaggagttcctaggttgaagtca 11406980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 11588636 - 11588594
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| |||||||||| |||||||| |||||||||||||    
T  11588636 agtgagatgggatctcagatataggagttcctaggttgaagtc 11588594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 20991713 - 20991671
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||  ||||||||||||||||||| |||||||||||||    
T  20991713 agtgagataggatctcagatctaggagttcctaggttgaagtc 20991671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 373
Target Start/End: Original strand, 29546125 - 29546159
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactagg 373  Q
    ||||||||||||||||||||||||||||| |||||    
T  29546125 agtgagatgagatctcagatctaggagttcctagg 29546159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 380
Target Start/End: Complemental strand, 6045489 - 6045448
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagt 380  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||    
T  6045489 agtgagatgagatcttagatctacgagtttctaggttgaagt 6045448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 378
Target Start/End: Complemental strand, 10279983 - 10279946
Alignment:
Q  341 tgagatgagatctcagatctaggagttactaggttgaa 378  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  10279983 tgagatgagatctcagatctacgagttcctaggttgaa 10279946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 382
Target Start/End: Original strand, 23174870 - 23174911
Alignment:
Q  341 tgagatgagatctcagatctaggagttactaggttgaagtca 382  Q
    ||||||| ||||||||||||||||||| ||| ||||||||||    
T  23174870 tgagatgggatctcagatctaggagttcctatgttgaagtca 23174911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 380
Target Start/End: Complemental strand, 24814096 - 24814055
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagt 380  Q
    ||||||||  ||||||||||||||||||| ||||||||||||    
T  24814096 agtgagataggatctcagatctaggagttcctaggttgaagt 24814055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 381
Target Start/End: Original strand, 23082740 - 23082804
Alignment:
Q  317 gggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||||  |||||| |  ||||| ||| ||||||||||||| ||||| |||||||||||||    
T  23082740 gggttgtgattggttgtaggacagtgacatgggatctcagatctatgagttcctaggttgaagtc 23082804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 258; Significance: 1e-143; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 258; E-Value: 1e-143
Query Start/End: Original strand, 1 - 382
Target Start/End: Complemental strand, 9037214 - 9036835
Alignment:
Q  1 ttctgaagcccaacaagatttatgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcatttgaagaatagatc 100  Q
    |||| |||||||||||| ||  ||||| |||||||||| |||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||||    
T  9037214 ttctaaagcccaacaagtttactgacccgtattgcttcagtatttaaacaagactggaagacctagagaatgattcaagccgtcatttgaagaatagatc 9037115  T
Q  101 atctagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaaac 200  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||| ||||||| ||||| ||  ||||||||||||||||| |    
T  9037114 atctagggttttgagtctgtttatgtgaacctttcgtgtatcatcttgatgcatgtttaggactgtgttt-gagttttaaattgtgcactactctgaagc 9037016  T
Q  201 ttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgtttgaaggtaacttcatttcattgtgtttgt 300  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||||||  |||||||||||||||||||| ||||||||||||||||||  |||||    
T  9037015 ttttaagcaaa-agttaggtagtttgtaaactgcacctaagctgtgaagtacggtgtttagttgttttgtttgatggtaacttcatttcattgaatttgt 9036917  T
Q  301 agtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtca 382  Q
    | ||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  9036916 aatttgagaatcacaggggttgtgatcaattgtaagggagtgagatgggatctcagatctaggagttcctaggttgaagtca 9036835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 1 - 386
Target Start/End: Complemental strand, 8749547 - 8749163
Alignment:
Q  1 ttctgaagcccaacaagatttatgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcatttgaagaatagatc 100  Q
    ||||||||||||||||| ||  | ||| |||||| |||  ||||||||||||||| ||||||||||||||  ||||||||| |||||||||||||| |||    
T  8749547 ttctgaagcccaacaagtttactaacccgtattgtttcaatatttaaacaagactggaagacctagagaatcattcaagccatcatttgaagaatatatc 8749448  T
Q  101 atctagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaaac 200  Q
    |||||||||||||||||||||| | ||| |||||||||||||||||||||| |||||||||| ||||||| ||||||||  |||||||||||||||||      
T  8749447 atctagggttttgagtctgtttttatgaacctttcgtgtatcatcttgatgcatgtttaggactgtgttt-gagttgtaaattgtgcactactctgaagt 8749349  T
Q  201 ttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgtttgaaggtaacttcatttcattgtgtttgt 300  Q
    |||||||||||||| ||||||||||||||| |||||| |||||||||| |||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  8749348 ttttaagcaaagaggtaggtagtttgtaaattgcacctaagctgtgaattacggtgtttagttgttttgtttgaaggtaacttcatttcattgtgtttgt 8749249  T
Q  301 agtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  8749248 aatttgagaatcacaggggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttcctaggttgaagttagtac 8749163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 73 - 270
Target Start/End: Original strand, 9031127 - 9031324
Alignment:
Q  73 attcaagccgtcattt-gaagaatagatcatctagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgtttt 171  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||| ||| |||||||||| |||||||     
T  9031127 attcaagccgtcattttgaagaatagatcatctaggattttgagtctgtttgtgtgagcttttcgtgtatcatcttaatgcatgtttaggactgtgttt- 9031225  T
Q  172 gagttgtattttgtgcactactctgaaacttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgt 270  Q
    ||||||||  ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| ||| |||||| |||  ||||||||| ||||||    
T  9031226 gagttgtaaattgtgcactactctgaagcttttaagaaaagagttaggtagtttgtaaactgcacctaagttgtgaaatacggtgtttagtttttttgt 9031324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 291 - 386
Target Start/End: Original strand, 9031321 - 9031416
Alignment:
Q  291 ttgtgtttgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    ||||||||||| ||||||||||||| ||| |||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  9031321 ttgtgtttgtaatttgagaatcacaggggatgtgatcaattgtaagggagtgagatgggatctcagatctaggagttcctaggttgaagtcagtac 9031416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 94 - 198
Target Start/End: Original strand, 11564326 - 11564429
Alignment:
Q  94 atagatcatctagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactact 193  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||  |||||| ||||||||||||||| |||||||||||  |||| |||||||    
T  11564326 atagatcatctagggttttgagtctatttatgtgagcctttcgtgtatcactttgatgcatgtttaggattgtgctttgagttgta-attgttcactact 11564424  T
Q  194 ctgaa 198  Q
    |||||    
T  11564425 ctgaa 11564429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 23 - 99
Target Start/End: Original strand, 11561164 - 11561240
Alignment:
Q  23 tgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcatttgaagaatagat 99  Q
    |||||||||||||||| || ||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||    
T  11561164 tgacctgtattgcttcagtgtttaaacaagactggaagacctagagaatcattcaagccgtcatttgaagaatagat 11561240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 124 - 380
Target Start/End: Complemental strand, 13914182 - 13913920
Alignment:
Q  124 tgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgtt---ttgagttgtattttgtgcactactctgaaacttttaagcaaagagttaggt 220  Q
    |||||||||||| ||||||| ||||||  ||||| |||| ||||||   || ||||||| |||   ||||||||  || || | |||||  ||| |||||    
T  13914182 tgtgagcctttcttgtatcaccttgatacatgttaaggactgtgttacattcagttgtaattttctcactactccaaagctgtgaagcacggagataggt 13914083  T
Q  221 agtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgtttgaaggtaacttcatttcatt-----gtgtttgtagtttgagaatcaca 315  Q
    |||||||  ||| |||||||||||||||| ||  ||||  || |||| |||||||||||||||||| | |||     |||||||||   |||  ||||||    
T  13914082 agtttgtgtactacaccaaagctgtgaagcacggtgttaggtagttt-gtttgaaggtaacttcatctgatttgtttgtgtttgtaacctgatgatcaca 13913984  T
Q  316 agggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagt 380  Q
     ||| ||||||  ||| || ||||||||||||| |||||||||||||||||| ||||||||||||    
T  13913983 ggggctgtgattggttcta-gggagtgagatgaaatctcagatctaggagttcctaggttgaagt 13913920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 266 - 378
Target Start/End: Original strand, 286807 - 286918
Alignment:
Q  266 tttgtttgaaggtaacttcatttcattgtgtttgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggag 365  Q
    ||||||||||||||||||||| |  ||||||||  | | ||| ||||||| ||||||||||  ||  || |  ||||||||| |||||||||||||||||    
T  286807 tttgtttgaaggtaacttcatctt-ttgtgttttgaatctgataatcacaggggttgtgattggtgttaggatagtgagatgggatctcagatctaggag 286905  T
Q  366 ttactaggttgaa 378  Q
    || ||||||||||    
T  286906 ttcctaggttgaa 286918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 335 - 383
Target Start/End: Complemental strand, 13918017 - 13917969
Alignment:
Q  335 agggagtgagatgagatctcagatctaggagttactaggttgaagtcag 383  Q
    |||||||||||||| |||||| ||||||||||| |||||||||||||||    
T  13918017 agggagtgagatgaaatctcatatctaggagttcctaggttgaagtcag 13917969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 378
Target Start/End: Original strand, 18064193 - 18064232
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaa 378  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  18064193 agtgagatgagatctcagatctaggagttcctaggttgaa 18064232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 378
Target Start/End: Complemental strand, 28051307 - 28051268
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaa 378  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  28051307 agtgagatgagatctcagatctaggagttcctaggttgaa 28051268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 13790851 - 13790809
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  13790851 agtgagatgggatctcagatctaggagttcctaggttgaagtc 13790809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 381
Target Start/End: Original strand, 20748151 - 20748193
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    |||||| |||||||||||||||||||||| |||||||||||||    
T  20748151 agtgagttgagatctcagatctaggagtttctaggttgaagtc 20748193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 381
Target Start/End: Original strand, 21718913 - 21718955
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||||||||||||||||||||||| ||||||| |||||    
T  21718913 agtgagatgagatctcagatctaggagttcctaggttaaagtc 21718955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 24195695 - 24195653
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  24195695 agtgagatgggatctcagatctaggagttcctaggttgaagtc 24195653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 384
Target Start/End: Original strand, 11558308 - 11558356
Alignment:
Q  336 gggagtgagatgagatctcagatctaggagttactaggttgaagtcagt 384  Q
    |||||||||||| ||||||| ||||||||||| |||||||||| |||||    
T  11558308 gggagtgagatgggatctcaaatctaggagttcctaggttgaaatcagt 11558356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 336 - 384
Target Start/End: Original strand, 11567577 - 11567625
Alignment:
Q  336 gggagtgagatgagatctcagatctaggagttactaggttgaagtcagt 384  Q
    |||||||||||| ||||||| ||||||||||| |||||||||| |||||    
T  11567577 gggagtgagatgggatctcaaatctaggagttcctaggttgaaatcagt 11567625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 341 - 381
Target Start/End: Complemental strand, 44452650 - 44452610
Alignment:
Q  341 tgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||| ||||||||||||||||||| |||||||||||||    
T  44452650 tgagatgggatctcagatctaggagttcctaggttgaagtc 44452610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 382
Target Start/End: Original strand, 215333 - 215376
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtca 382  Q
    ||||||||||||||||| |||||| |||| ||||||||||||||    
T  215333 agtgagatgagatctcatatctagaagttcctaggttgaagtca 215376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 378
Target Start/End: Original strand, 6580854 - 6580893
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaa 378  Q
    ||||||||| ||||||||||||||||||| ||||||||||    
T  6580854 agtgagatgggatctcagatctaggagttcctaggttgaa 6580893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 386
Target Start/End: Original strand, 14406616 - 14406663
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    ||||||||| |||||||||||||||||||  |||||||| ||||||||    
T  14406616 agtgagatgggatctcagatctaggagttcttaggttgaggtcagtac 14406663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 378
Target Start/End: Original strand, 18034883 - 18034922
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaa 378  Q
    ||||||||| ||||||||||||||||||| ||||||||||    
T  18034883 agtgagatgggatctcagatctaggagttcctaggttgaa 18034922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 382
Target Start/End: Original strand, 7495921 - 7495959
Alignment:
Q  344 gatgagatctcagatctaggagttactaggttgaagtca 382  Q
    |||| ||||||||||||||||||| ||||||||||||||    
T  7495921 gatgggatctcagatctaggagttcctaggttgaagtca 7495959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Original strand, 13515583 - 13515625
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||||||||||||||||| ||||||| |||||    
T  13515583 agtgagatgggatctcagatctaggagttcctaggttaaagtc 13515625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Original strand, 15686146 - 15686188
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||||||||||||||||| || ||||||||||    
T  15686146 agtgagatgggatctcagatctaggagttcctgggttgaagtc 15686188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 17702578 - 17702536
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||||||||||||||||| ||||||| |||||    
T  17702578 agtgagatgggatctcagatctaggagttcctaggtttaagtc 17702536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 381
Target Start/End: Original strand, 980355 - 980395
Alignment:
Q  340 gtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    |||||||||||||| ||||||||||||| |||||||||||||    
T  980355 gtgagatgagatcttagatctaggagtt-ctaggttgaagtc 980395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 380
Target Start/End: Original strand, 21094689 - 21094730
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagt 380  Q
    ||||||| | ||||||||||||||||||| ||||||||||||    
T  21094689 agtgagacgggatctcagatctaggagttcctaggttgaagt 21094730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 380
Target Start/End: Original strand, 23954544 - 23954585
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagt 380  Q
    ||||||||| ||||||| ||||||||||| ||||||||||||    
T  23954544 agtgagatgggatctcaaatctaggagttcctaggttgaagt 23954585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 252; Significance: 1e-140; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 252; E-Value: 1e-140
Query Start/End: Original strand, 1 - 386
Target Start/End: Original strand, 7897564 - 7897950
Alignment:
Q  1 ttctgaagcccaacaagatttatgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcattt-gaagaatagat 99  Q
    ||||||||||||||||| ||  ||||| |||||||||| |||||||||||||||| ||||||||||||| | |||||||||||||||| |||||||||||    
T  7897564 ttctgaagcccaacaagtttactgacccgtattgcttcagtatttaaacaagactggaagacctagagaggtattcaagccgtcattttgaagaatagat 7897663  T
Q  100 catctagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaaa 199  Q
    |||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||| ||||||| |||||||| ||||||||||||||||||     
T  7897664 catctagggttttgagtctgtttatgtgagcctttcgtgtataattttgatgcatgtttaggactgtgttt-gagttgtaatttgtgcactactctgaag 7897762  T
Q  200 cttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgtttgaaggtaacttca-tttcattgtgttt 298  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||  |||| |||||| ||||||||||||||||||| ||| ||||| |||    
T  7897763 cttttaagcaaaaagttaggtagtttgtaaactgcaccaaagctgtgaagtacggtgttcagttgtgttgtttgaaggtaacttcattttgattgtattt 7897862  T
Q  299 gtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    ||| |||||| |||||| ||| ||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||    
T  7897863 gtaatttgagtatcacaggggctgtgatcagttgtaagggagtgagatgggatctcagatctaagagttcctaggttgaagtcagtac 7897950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 4 - 386
Target Start/End: Original strand, 20497804 - 20498188
Alignment:
Q  4 tgaagcccaacaagatttatgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcattt-gaagaatagatcat 102  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||  |||||||||||| |  |||||||||||||||| ||||||||||||||    
T  20497804 tgaagcccaacaagattaatgacccgtattgcttcggtatttaaacaagacaggaagacctagagcatcattcaagccgtcattttgaagaatagatcat 20497903  T
Q  103 ctagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaaactt 202  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||| |||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  20497904 ctagggttttgagtctgtttatgtgagcctttcgtgtatcatcctaatgcatgtttaggactgtgttt-gagttgtattttgtgcactactctgaaactt 20498002  T
Q  203 ttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgtttt-gtttgaaggtaacttcatttc-attgtgtttgt 300  Q
    |||||||||  ||||||||||||||||| ||||||||||||| |||||||  |||  ||||||||| ||||||||||||||||||||  ||||| |||||    
T  20498003 ttaagcaaaacgttaggtagtttgtaaattgcaccaaagctgcgaagtacggtgtccagttgtttttgtttgaaggtaacttcattttgattgtatttgt 20498102  T
Q  301 agtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
      |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20498103 tatttgagtatcacaagggctgtgatcagttgtaagggagtgagatgagatctcagatctaggagttcctaggttgaagtcagtac 20498188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 243; E-Value: 1e-134
Query Start/End: Original strand, 1 - 386
Target Start/End: Original strand, 17920435 - 17920819
Alignment:
Q  1 ttctgaagcccaacaagatttatgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcatttgaagaatagatc 100  Q
    |||||||||||||||||  || | ||| |||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||| ||||| |||    
T  17920435 ttctgaagcccaacaagtcttctaacccgtattgcttcagtatttaaacaagactggaagacctagagaagtattcaagccgtcatttgaggaataaatc 17920534  T
Q  101 atctagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaaac 200  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| || | ||||||||||| |||||||||||||||||| |    
T  17920535 atctagggttttgagtctgtttatgtgagcctttcgtgtatcctcttgatgcatgtttaggactgag-tttgagttgtaatttgtgcactactctgaagc 17920633  T
Q  201 ttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgtttgaaggtaacttca-tttcattgtgtttg 299  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||||| ||||||||||||||||||| ||| ||||| ||||    
T  17920634 ttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacggtgttcagttgtgttgtttgaaggtaacttcattttgattgtatttg 17920733  T
Q  300 tagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    ||  ||||| |||||| ||| ||||||||||||||| ||||| ||||| ||||||||||||||||||| ||||||||||||||||||    
T  17920734 ta-cttgagtatcacaggggctgtgatcagttgtaaaggagtaagatgggatctcagatctaggagttcctaggttgaagtcagtac 17920819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 23 - 386
Target Start/End: Original strand, 26182905 - 26183269
Alignment:
Q  23 tgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcattt-gaagaatagatcatctagggttttgagtctgtt 121  Q
    ||||| |||||||||| |||||||||||||||| || |||||||||||  |||||| ||||||||| |||||||||||||||||||||||||||| ||||    
T  26182905 tgacccgtattgcttcagtatttaaacaagactggatgacctagagaattattcaacccgtcattttgaagaatagatcatctagggttttgagtatgtt 26183004  T
Q  122 tatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaaacttttaagcaaagagttaggta 221  Q
    |||||||| ||||||||||||||||||||| |||||||||| | ||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||    
T  26183005 tatgtgagactttcgtgtatcatcttgatgcatgtttaggactctgttt-gagttgtaatttgtgcactactctgaagcttttaagcaaagagttaggta 26183103  T
Q  222 gtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgtttgaaggtaacttca-tttcattgtgtttgtagtttgagaatcacaagggt 320  Q
    ||||||||||||||| ||||||||||| ||| ||||| | ||||||||||| |||||||||||| ||| |||||  ||||  |||||| |||||| |||     
T  26183104 gtttgtaaactgcacgaaagctgtgaaatacgatgttcaattgttttgtttaaaggtaacttcattttgattgtaattgttatttgagtatcacaggggc 26183203  T
Q  321 tgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    ||||||||||| ||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  26183204 tgtgatcagttttaaaggagtgagatgggatctcagatctaggagttcctaggttgaagtcagtac 26183269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 136; E-Value: 8e-71
Query Start/End: Original strand, 23 - 247
Target Start/End: Complemental strand, 20287049 - 20286822
Alignment:
Q  23 tgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcattt-gaagaatagatcatctagggttttgagtctgtt 121  Q
    ||||| ||||| |||| || ||||||||||||| |||||| |||||||  |||||||||||||||| |||||||||||||||||||||||||||||| ||    
T  20287049 tgacccgtatttcttcagtttttaaacaagactggaagacttagagaattattcaagccgtcattttgaagaatagatcatctagggttttgagtctatt 20286950  T
Q  122 -tatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaaacttttaagcaaagagttaggt 220  Q
     | ||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||  ||||||||||||||||| |||||||||||||| ||||||    
T  20286949 atttgtgagcctttcgtgtatcattttgatgcatgtttaggactgtgttttgagttgtaagttgtgcactactctgaagcttttaagcaaagatttaggt 20286850  T
Q  221 agtttg-taaactgcaccaaagctgtga 247  Q
    |||||| |||||||||||||||||||||    
T  20286849 agtttgttaaactgcaccaaagctgtga 20286822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 236 - 382
Target Start/End: Original strand, 20740821 - 20740968
Alignment:
Q  236 ccaaagctgtgaagtacaatgtttagttgttttgtttgaaggtaacttcat--ttcattgtgtttgtagtttgagaatcacaagggttgtgatcagttgt 333  Q
    |||||||||||||| || | |||  || ||||||||||||||| |||||||  ||  |||||||  ||  |||| ||||||||| | ||||||  |||||    
T  20740821 ccaaagctgtgaagcacgaagttaggtagttttgtttgaaggttacttcatcttttgttgtgttgataacttgataatcacaagagctgtgattggttgt 20740920  T
Q  334 aagggagtgagatgagatctcagatctaggagttactaggttgaagtca 382  Q
    | |||||||||||||||||||||||||||||||| ||||||||||||||    
T  20740921 a-gggagtgagatgagatctcagatctaggagttcctaggttgaagtca 20740968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 170 - 381
Target Start/End: Original strand, 22130665 - 22130879
Alignment:
Q  170 ttgagttgtattttgtgcactactctgaaacttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttg 269  Q
    |||||||||| ||| | ||||||||  || || | |||||  ||| ||||||||||||| ||| |||||||||||||||| ||  ||||  || ||||      
T  22130665 ttgagttgtagtttattcactactccaaagctgtgaagcacggagataggtagtttgtatactacaccaaagctgtgaagcacggtgttaggtagttta- 22130763  T
Q  270 tttgaaggtaacttcatttcatt-----gtgtttgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctagga 364  Q
    ||||||||||||||||| | |||     |||||||||   ||| ||||||| ||| ||||||  |||||| |||||||||||| ||||||||||||||||    
T  22130764 tttgaaggtaacttcatctgatttgtttgtgtttgtaacctgataatcacaggggctgtgattggttgta-gggagtgagatgggatctcagatctagga 22130862  T
Q  365 gttactaggttgaagtc 381  Q
    ||| |||||||||||||    
T  22130863 gtttctaggttgaagtc 22130879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 264 - 380
Target Start/End: Original strand, 13941912 - 13942026
Alignment:
Q  264 gttttgtttgaaggtaacttcatttcattgtgtttgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctagg 363  Q
    |||||||||||||||||||||||  |||| ||| | || | ||||||||||| ||||||||||   ||||| |  | ||||||| |||||||||||||||    
T  13941912 gttttgtttgaaggtaacttcat--cattttgtgtttaatctgagaatcacaggggttgtgattgattgtaggataatgagatgggatctcagatctagg 13942009  T
Q  364 agttactaggttgaagt 380  Q
    |||| ||||||||||||    
T  13942010 agttcctaggttgaagt 13942026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 268 - 382
Target Start/End: Complemental strand, 9522773 - 9522662
Alignment:
Q  268 tgtttgaaggtaacttcatttcattgtgtttgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagtt 367  Q
    |||||||||||||||||||  |||| ||| | || | ||| ||||||| ||||||||||   ||| | || ||||||||| |||||||||||||||||||    
T  9522773 tgtttgaaggtaacttcat--cattttgtgtttaatctgataatcacaggggttgtgattgattg-agggaagtgagatgggatctcagatctaggagtt 9522677  T
Q  368 actaggttgaagtca 382  Q
     ||||||||||||||    
T  9522676 cctaggttgaagtca 9522662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 382
Target Start/End: Complemental strand, 22979917 - 22979874
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtca 382  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||    
T  22979917 agtgagatgagatctcagatctaagagttcctaggttgaagtca 22979874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 381
Target Start/End: Original strand, 13734961 - 13735003
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  13734961 agtgagatgggatctcagatctaggagttcctaggttgaagtc 13735003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 381
Target Start/End: Original strand, 20845782 - 20845824
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    |||||||| |||||||||||||||||||| |||||||||||||    
T  20845782 agtgagataagatctcagatctaggagttcctaggttgaagtc 20845824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 381
Target Start/End: Original strand, 22404749 - 22404791
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  22404749 agtgagatgggatctcagatctaggagttcctaggttgaagtc 22404791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 339 - 388
Target Start/End: Complemental strand, 18221281 - 18221232
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtcagtactg 388  Q
    ||||||||| ||||||||||||||||||| |||||||||| ||| |||||    
T  18221281 agtgagatgggatctcagatctaggagttcctaggttgaactcaatactg 18221232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 229
Target Start/End: Complemental strand, 11205135 - 11205008
Alignment:
Q  102 tctagggttttgagtc-tgtttatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaaac 200  Q
    |||||| ||||||||| | ||| |||||||||||||||| |||| |||||  ||||| |||| |||   ||||||||||  |||||||||||||   | |    
T  11205135 tctaggattttgagtcatttttttgtgagcctttcgtgtgtcat-ttgatacatgttaaggactgtcacttgagttgtaagttgtgcactactccagagc 11205037  T
Q  201 ttttaagcaaagagttaggtagtttgtaa 229  Q
    |||||||||| ||| ||||||| ||||||    
T  11205036 ttttaagcaaggagataggtagattgtaa 11205008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 374
Target Start/End: Complemental strand, 13338762 - 13338727
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggt 374  Q
    ||||||||||||||||||||||||||||| ||||||    
T  13338762 agtgagatgagatctcagatctaggagttcctaggt 13338727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 382
Target Start/End: Original strand, 17661399 - 17661442
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtca 382  Q
    |||||||||  |||||||||||||||||| ||||||||||||||    
T  17661399 agtgagatggaatctcagatctaggagttcctaggttgaagtca 17661442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 378
Target Start/End: Original strand, 20714724 - 20714763
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaa 378  Q
    |||||||||| |||||||||||||||||| ||||||||||    
T  20714724 agtgagatgaaatctcagatctaggagttcctaggttgaa 20714763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 378
Target Start/End: Original strand, 22184586 - 22184625
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaa 378  Q
    ||||||||| ||||||||||||||||||| ||||||||||    
T  22184586 agtgagatgggatctcagatctaggagttcctaggttgaa 22184625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 378
Target Start/End: Original strand, 26329202 - 26329241
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaa 378  Q
    ||||||||| ||||||||||||||||||| ||||||||||    
T  26329202 agtgagatgggatctcagatctaggagttcctaggttgaa 26329241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 378
Target Start/End: Original strand, 30605679 - 30605718
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaa 378  Q
    ||||||||||||||||||||||||||||| |||| |||||    
T  30605679 agtgagatgagatctcagatctaggagttcctagattgaa 30605718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 24190034 - 24189992
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||||||||||| ||||| |||||||||||||    
T  24190034 agtgagatgggatctcagatctatgagttcctaggttgaagtc 24189992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 339 - 380
Target Start/End: Original strand, 9422505 - 9422546
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagt 380  Q
    ||||||||| |||||||||||||||||||  |||||||||||    
T  9422505 agtgagatgggatctcagatctaggagttcataggttgaagt 9422546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 247; Significance: 1e-137; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 386
Target Start/End: Complemental strand, 23541752 - 23541367
Alignment:
Q  1 ttctgaagcccaacaagatttatgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcatttgaagaatagatc 100  Q
    |||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||||  |||||||| |||||||||||||||||||    
T  23541752 ttctgaagcccaacaagattaatgatctgtattgcttcagtatttaaacaagactagaagacctagagaatgattcaagctgtcatttgaagaatagatc 23541653  T
Q  101 atctagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaaac 200  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||  ||||||||||||||||| |    
T  23541652 atctagggttttgagtctgtttttgtgagcctttcgtgtatcatcttgatgcatgtttaggattgtg-tttgagttgtaaattgtgcactactctgaagc 23541554  T
Q  201 ttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgtttgaaggtaacttc-atttcattgtgtttg 299  Q
    |||||||||||||||||||||||||||| ||| |||| ||| ||||||||||  ||||||||||||||||||||||||||||||  ||| ||||| ||||    
T  23541553 ttttaagcaaagagttaggtagtttgtagactacacctaagttgtgaagtacggtgtttagttgttttgtttgaaggtaacttcgttttgattgtatttg 23541454  T
Q  300 tagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    |  |||||| |||||| ||| | ||||||||||||||||||||||||||||||||||||||||  ||| |  |||||||||||||||    
T  23541453 ttatttgagtatcacaggggctatgatcagttgtaagggagtgagatgagatctcagatctagttgttcccgggttgaagtcagtac 23541367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 23 - 386
Target Start/End: Original strand, 25354307 - 25354671
Alignment:
Q  23 tgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcatttgaagaatagatcatctagggttttgagtctgttt 122  Q
    ||||| |||||||||| |||||||||||||||| |||| |||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25354307 tgacccgtattgcttcagtatttaaacaagactggaaggcctagagaattattcaagccgtcatttgaagaatagattatctagggttttgagtctgttt 25354406  T
Q  123 atgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgt-attttgtgcactactctgaaacttttaagcaaagagttaggta 221  Q
    ||||||||||||||||| ||||||||||| |||||||||| |||| |||||||||| | |||||||||||||||||| ||||||||||||||||||||||    
T  25354407 atgtgagcctttcgtgtgtcatcttgatgcatgtttaggactgtg-tttgagttgtaaatttgtgcactactctgaagcttttaagcaaagagttaggta 25354505  T
Q  222 gtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgtttgaaggtaacttca-tttcattgtgtttgtagtttgagaatcacaagggt 320  Q
    ||||||||||||||||||||||||||||||| ||||| |||||| ||||||||||||||||||| ||| ||||| |||||  |||||| |||||| |||     
T  25354506 gtttgtaaactgcaccaaagctgtgaagtacgatgttcagttgtattgtttgaaggtaacttcattttgattgtatttgttatttgagtatcacaggggc 25354605  T
Q  321 tgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||||    
T  25354606 tgtgatcagttgtaagggagtgagatgtgatctcaaatctaggagttcctaggttgaagtcagtac 25354671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 1 - 386
Target Start/End: Original strand, 19894463 - 19894839
Alignment:
Q  1 ttctgaagcccaacaagatttatgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcatttgaagaatagatc 100  Q
    ||||||||||||||||| ||  |||||  ||||||||| |||||||||||||| | |||||| |||||||  |||||||| |||||||||||||||||||    
T  19894463 ttctgaagcccaacaagtttactgacccttattgcttcagtatttaaacaagattggaagacatagagaatcattcaagctgtcatttgaagaatagatc 19894562  T
Q  101 atctagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaaac 200  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||  ||||||||||||||||| |    
T  19894563 atctagggttt-gagtctgtttatgtgagcctttcgtgtatcatcttgatgcatgtttaggaatgtgttt-gagttgtaaattgtgcactactctgaagc 19894660  T
Q  201 ttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgtttgaaggtaacttcatttcattgtgtttgt 300  Q
    |||||||||||||| ||||||||||||||| |||||| ||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||||    
T  19894661 ttttaagcaaagaggtaggtagtttgtaaattgcacctaagctgtgaagtacggcgtttagttgttttgtttgaaggtaacttcatttcattgtgtttgt 19894760  T
Q  301 agtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    | ||||||||||||| |||||||||       ||||||||||||||| |||||||||| |||||||| ||||||||||||||||||    
T  19894761 aatttgagaatcacaggggttgtga-------taagggagtgagatgggatctcagatttaggagtttctaggttgaagtcagtac 19894839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 5 - 367
Target Start/End: Original strand, 46738918 - 46739275
Alignment:
Q  5 gaagcccaacaagattta-tgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcatttgaagaatagatcatc 103  Q
    ||||||||||||| |||| ||||| |||||||||| |||||| ||||||||| ||||||||||||||| |||||||||||||| | ||||||||||||||    
T  46738918 gaagcccaacaagttttactgacccgtattgcttcagtatttcaacaagactggaagacctagagaagtattcaagccgtcatctaaagaatagatcatc 46739017  T
Q  104 tagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaaacttt 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||  ||||||||||||||||| ||||    
T  46739018 tagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatgcatgtttaggactgtg-tttgagttgtaaattgtgcactactctgaagcttt 46739116  T
Q  204 taagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgtttgaaggtaacttcatttcattgtgtttgtagt 303  Q
    ||||||||||||||| ||||||| |||||||||| ||| |||||||||   |||||||||||||||||||||||||||||||||| ||||| |||||| |    
T  46739117 taagcaaagagttagatagtttgaaaactgcacctaagttgtgaagtatggtgtttagttgttttgtttgaaggtaacttcattttattgtatttgtaat 46739216  T
Q  304 ttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagtt 367  Q
    |||||||||||      ||||||||||| |||||||||||||||||||||||||||||||||||    
T  46739217 ttgagaatcac-----ctgtgatcagttttaagggagtgagatgagatctcagatctaggagtt 46739275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 386
Target Start/End: Original strand, 11324794 - 11325180
Alignment:
Q  1 ttctgaagcccaacaagatttatgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcattt-gaagaatagat 99  Q
    |||||||||||||||||||| |||||| |||||||||| |||||||||||||||| |||||| ||||| |  |||||| ||||||||| |||||||||||    
T  11324794 ttctgaagcccaacaagattaatgacccgtattgcttcagtatttaaacaagactggaagacgtagagcattattcaaaccgtcattttgaagaatagat 11324893  T
Q  100 catctagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaaa 199  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||   ||||||||||||||||||||||||||||||     
T  11324894 catctagggttttgagtctgtttatgtgagcctttagtgtatcatcttgatgcatgtttaggactg-catttgagttgtattttgtgcactactctgaag 11324992  T
Q  200 cttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttg-ttttgtttgaaggtaacttca-tttcattgtgtt 297  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||||  |||  ||||| ||||||||||||||||||||| ||| ||||| ||    
T  11324993 cttttaagcaaagagttaggtagtttgtgaactgcacc-aagctgtgaagtacggtgtccagttgtttttgtttgaaggtaacttcattttgattgtatt 11325091  T
Q  298 tgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    |||  |||||| |||||| ||| |||||||||||||||||||||||||||  |||| ||||||| ||||| |||||||||||| |||||    
T  11325092 tgttatttgagtatcacaggggctgtgatcagttgtaagggagtgagatggaatcttagatctacgagttcctaggttgaagttagtac 11325180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 386
Target Start/End: Complemental strand, 22555482 - 22555095
Alignment:
Q  1 ttctgaagcccaacaagatttatgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcattt-gaagaatagat 99  Q
    |||||||||||||||||||| || ||| |||||| ||| |||||||||| ||||| ||| |||||||| |  |||||||||||||||| |||||||||||    
T  22555482 ttctgaagcccaacaagattaataacccgtattgtttcagtatttaaacgagactggaaaacctagagcattattcaagccgtcattttgaagaatagat 22555383  T
Q  100 catctagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaaa 199  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||| |||||||||||||||||||| ||||||     
T  22555382 catctaggattttgagtctgtttatgtgagccttttgtgtatcatcttgatgcatgtttaggactgtgttt-gagttgtattttgtgcactattctgaag 22555284  T
Q  200 cttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttg-ttttgtttgaaggtaacttca-tttcattgtgtt 297  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||  |||  ||||| |||||||||||| |||||||| ||| ||||| ||    
T  22555283 cttttaagcaaagagttaggtagtttgtaaactacaccaaagctgtgaagtacggtgtccagttgtttttgtttgaagataacttcattttgattgtatt 22555184  T
Q  298 tgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    |||  |||||| |||||| ||| | |||||||||| |||||||||||||| ||||||||||||| ||||| ||||||||||||||||||    
T  22555183 tgttatttgagtatcacaggggctatgatcagttgcaagggagtgagatgggatctcagatctacgagttcctaggttgaagtcagtac 22555095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 1 - 386
Target Start/End: Complemental strand, 24143643 - 24143258
Alignment:
Q  1 ttctgaagcccaacaagatttatgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcatttgaagaatagatc 100  Q
    ||||||||||||||||| ||  ||||| ||||| ||||  ||||||||||||||| ||||||||||||||  ||||||| ||   ||||||||||| |||    
T  24143643 ttctgaagcccaacaagtttactgacccgtattacttcaatatttaaacaagactggaagacctagagaatcattcaagtcgctgtttgaagaatatatc 24143544  T
Q  101 atctagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaaac 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||| |||| ||||||||||| |||||||||||||||||| |    
T  24143543 atctagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatacatgcttaggactgtg-tttgagttgtaatttgtgcactactctgaagc 24143445  T
Q  201 ttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgtttgaaggtaacttca-tttcattgtgtttg 299  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||||  |||| |||||| ||||||||||||| ||||| ||| ||||| ||||    
T  24143444 ttttaagcaaagagttaggtagtttgtaaactgtatcaaagctgtgaagtacggtgttcagttgtgttgtttgaaggtagcttcattttgattgtatttg 24143345  T
Q  300 tagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    |  |||||| || ||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||  |||||| ||||||||||    
T  24143344 ttatttgagtattacaggggctgtgatcagttgtaagggagtgagatgggatctcagatctaggagttcataggttaaagtcagtac 24143258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 1 - 382
Target Start/End: Complemental strand, 11905605 - 11905221
Alignment:
Q  1 ttctgaagcccaacaagat-ttatgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcatttgaagaatagat 99  Q
    ||||||||||||||||| | || ||||| |||||||||| |||||||| |||||||  ||||||||  |||  ||| |||||||||||||||||| | ||    
T  11905605 ttctgaagcccaacaagttgttctgacccgtattgcttcagtatttaatcaagactgcaagacctaatgaattattgaagccgtcatttgaagaacaaat 11905506  T
Q  100 catctagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaaa 199  Q
    | | |||| |||||||| ||| | ||||||||||||||||||||||||| || ||||||| || | || ||||||||||| ||||| ||||||||||||     
T  11905505 cttttaggtttttgagtttgtatttgtgagcctttcgtgtatcatcttgttgcatgtttatgactatg-tttgagttgtaatttgttcactactctgaag 11905407  T
Q  200 cttttaagcaaagagttaggtagtttgta-aactgcaccaaagctgtgaagtacaatgtttagttgttttg-tttgaaggtaacttcat--ttcattgtg 295  Q
    || | ||||||| |||||||||||||| |  ||| |||||||| ||| ||| ||  |  | ||  |||||| ||||| |||||||| ||  ||  ||||     
T  11905406 ctgtgaagcaaatagttaggtagtttgaagtactacaccaaagttgttaagcacggttgtaagaagttttgttttgagggtaacttaatcattgtttgta 11905307  T
Q  296 tttgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtca 382  Q
    | |||  ||||||||||||| ||| |||||| | |||| ||||||| ||||| ||||| ||||||||||||| ||||||||||||||    
T  11905306 tctgttctttgagaatcacatgggctgtgattatttgt-agggagttagatgggatctaagatctaggagttcctaggttgaagtca 11905221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 179
Target Start/End: Original strand, 15687349 - 15687528
Alignment:
Q  1 ttctgaagcccaacaagat-ttatgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcatttgaagaatagat 99  Q
    ||||||||||||||||| | || |||||  ||||||||| |||| |||||||||||  ||||||||    |  |||||||||||||||||||||||||||    
T  15687349 ttctgaagcccaacaagttgttctgacccatattgcttcagtatctaaacaagactgcaagacctaattcatcattcaagccgtcatttgaagaatagat 15687448  T
Q  100 catctagggttttgagtctgtt-tatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgta 179  Q
    ||| |||||||||||||||||| | |||||| ||||||||||||||||||||| ||| |||||| |||| |||||||||||    
T  15687449 catttagggttttgagtctgttatttgtgagtctttcgtgtatcatcttgatgcatgcttaggactgtg-tttgagttgta 15687528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 382
Target Start/End: Original strand, 10198239 - 10198282
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtca 382  Q
    ||||||||||||||||||||||||||||| ||||||||||||||    
T  10198239 agtgagatgagatctcagatctaggagttcctaggttgaagtca 10198282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 10722154 - 10722112
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  10722154 agtgagatgagatctcagatctaggagttcctaggttgaagtc 10722112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 10935923 - 10935881
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  10935923 agtgagatgagatctcagatctaggagttcctaggttgaagtc 10935881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 342 - 386
Target Start/End: Complemental strand, 2680013 - 2679969
Alignment:
Q  342 gagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    |||||||||||||||||||||||| | ||||||||||||||||||    
T  2680013 gagatgagatctcagatctaggagctcctaggttgaagtcagtac 2679969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 8163956 - 8163914
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  8163956 agtgagatgggatctcagatctaggagttcctaggttgaagtc 8163914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 10724430 - 10724388
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  10724430 agtgagatgggatctcagatctaggagttcctaggttgaagtc 10724388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 10938199 - 10938157
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  10938199 agtgagatgggatctcagatctaggagttcctaggttgaagtc 10938157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 19659610 - 19659568
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  19659610 agtgagatgggatctcagatctaggagttcctaggttgaagtc 19659568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 21478279 - 21478237
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  21478279 agtgagatgggatctcagatctaggagttcctaggttgaagtc 21478237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 25116997 - 25116955
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  25116997 agtgagatgggatctcagatctaggagttcctaggttgaagtc 25116955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 266 - 378
Target Start/End: Original strand, 19183593 - 19183708
Alignment:
Q  266 tttgtttgaaggtaacttca---tttcattgtgtttgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctag 362  Q
    ||||||||||||||||||||   |||  |||||||| |||| ||| ||||||||||| |||| |     ||| |  ||||||||| ||||||||||||||    
T  19183593 tttgtttgaaggtaacttcaccatttgtttgtgtttttagtctgataatcacaagggctgtggttgaccgtaggatagtgagatgggatctcagatctag 19183692  T
Q  363 gagttactaggttgaa 378  Q
    ||||| ||||||||||    
T  19183693 gagttcctaggttgaa 19183708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 378
Target Start/End: Complemental strand, 9069116 - 9069077
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaa 378  Q
    ||||||||||||||||||||||||||||| |||| |||||    
T  9069116 agtgagatgagatctcagatctaggagttcctagattgaa 9069077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 378
Target Start/End: Original strand, 16655327 - 16655366
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaa 378  Q
    ||||||||| ||||||||||||||||||| ||||||||||    
T  16655327 agtgagatgggatctcagatctaggagttcctaggttgaa 16655366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 378
Target Start/End: Complemental strand, 33746134 - 33746095
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaa 378  Q
    |||||||||||||||||||||||| |||| ||||||||||    
T  33746134 agtgagatgagatctcagatctagaagttcctaggttgaa 33746095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 10191058 - 10191016
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    |||||||||  |||||||||||||||||| |||||||||||||    
T  10191058 agtgagatggaatctcagatctaggagtttctaggttgaagtc 10191016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Original strand, 23400182 - 23400224
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||| ||||||||||||||| |||||||||||||    
T  23400182 agtgagatgggatatcagatctaggagttcctaggttgaagtc 23400224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Original strand, 33898976 - 33899018
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||||||||||| | ||||||||| |||||||||||||    
T  33898976 agtgagatgagatctcaaacctaggagttcctaggttgaagtc 33899018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 246; Significance: 1e-136; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 386
Target Start/End: Original strand, 16137230 - 16137617
Alignment:
Q  1 ttctgaagcccaacaagatttatgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcattt-gaagaatagat 99  Q
    ||||||||||||||||| ||  | ||| |||||||||| ||||||| |||||||| | |||||||||||||||||||||||||||||| |||||||||||    
T  16137230 ttctgaagcccaacaagtttactaacccgtattgcttcagtatttatacaagactgggagacctagagaagaattcaagccgtcattttgaagaatagat 16137329  T
Q  100 catctagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaaa 199  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||| ||||||||  |||||||||||||||||     
T  16137330 catctagggttttgagtctgtttatgcgagcctttcgtgtatcatcttgatgcatgtttaggactgtgttt-gagttgtaaattgtgcactactctgaag 16137428  T
Q  200 cttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgt--ttgaaggtaacttcatttcattgtgtt 297  Q
    ||||||||||||| |||||||||||||||||||||||| ||||||| ||||||  ||||||||||||||||  |||||||||||||||||| ||||||||    
T  16137429 cttttaagcaaagtgttaggtagtttgtaaactgcacctaagctgtaaagtacggtgtttagttgttttgtgtttgaaggtaacttcattttattgtgtt 16137528  T
Q  298 tgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    |||| ||||||||||| | |||||||||| |||||||||||||||||||| |||||||||| || ||||| ||||||||||||||||||    
T  16137529 tgtaatttgagaatcataggggttgtgataagttgtaagggagtgagatgtgatctcagatttatgagttcctaggttgaagtcagtac 16137617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 386
Target Start/End: Complemental strand, 19216463 - 19216077
Alignment:
Q  1 ttctgaagcccaacaagatttatgacctgtattgcttcggtatttaaa-caagactagaagacctagagaagaattcaagccgtcatttgaagaatagat 99  Q
    |||||||||||||||||  || ||||| |||||||||| ||||||||| |||| |  |||||| |||||||  |||||||||||||||||||||||| ||    
T  19216463 ttctgaagcccaacaagtcttctgacccgtattgcttcagtatttaaaacaagtcaggaagacttagagaattattcaagccgtcatttgaagaataaat 19216364  T
Q  100 catctagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaaa 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| |||||||| ||||||||||||||||||     
T  19216363 catctagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatgcatgtttaagactgtgttt-gagttgtaatttgtgcactactctgaag 19216265  T
Q  200 cttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgtttgaaggtaacttcatttc-attgtgttt 298  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||||||   ||||||||||||||||||||||||||||||||||  ||||| |||    
T  19216264 cttttaagcaaagagttagttagtttgtaaactgcacctaagctgtgaagtatggtgtttagttgttttgtttgaaggtaacttcattttgattgtattt 19216165  T
Q  299 gtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
        |||||| |||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||||| ||| |||||||| |||||    
T  19216164 tctatttgagtatcacaagggctgtgatcagttgtaagggagtgagatgggatctcaaatctaggagttcctaagttgaagttagtac 19216077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 73 - 386
Target Start/End: Original strand, 12444443 - 12444757
Alignment:
Q  73 attcaagccgtcattt-gaagaatagatcatctagggttttgagtctgtttatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgtttt 171  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||     
T  12444443 attcaagtcgtcattttgaagaatagatcatctagggttttgagtctgtttatgtgagcctttcgtgtatcattttgatgcatgtttaggactgtgttt- 12444541  T
Q  172 gagttgtattttgtgcactactctgaaacttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgtt 271  Q
    |||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||  |||||||||||||||||||  |||| |||||| |||||    
T  12444542 gagttgtaatttgtgcactactctgaagcttttatgcaaagagttaggtagtttgtaaacaacaccaaagctgtgaagtacggtgttcagttgtgttgtt 12444641  T
Q  272 tgaaggtaacttca-tttcattgtgtttgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttact 370  Q
    ||||||||| |||| ||| ||||| |||||  |||||| |||||| |||||||||||||||||||||||||||| || ||||||| ||||||||||| ||    
T  12444642 tgaaggtaaattcattttgattgtatttgttatttgagtatcacaggggttgtgatcagttgtaagggagtgaggtgggatctcaaatctaggagttcct 12444741  T
Q  371 aggttgaagtcagtac 386  Q
    ||||||||||||||||    
T  12444742 aggttgaagtcagtac 12444757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 1 - 386
Target Start/End: Complemental strand, 9385125 - 9384738
Alignment:
Q  1 ttctgaagcccaacaagattta-tgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcattt-gaagaataga 98  Q
    |||| |||||||||||  |||| ||||| |||||||||| |||||||||||||| | |||||||||||| |  ||| |||||||||||| ||||| ||||    
T  9385125 ttctaaagcccaacaaagtttactgacccgtattgcttcagtatttaaacaagagtggaagacctagagtatcatttaagccgtcattttgaagattaga 9385026  T
Q  99 tcatctagggttttgagtctgtt-tatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctga 197  Q
    |  | |||||||||||||||||| | |||||||||||||||||||||||||||| ||||||| || ||||||| ||||| || |||||||||||||||||    
T  9385025 ttgtttagggttttgagtctgttatttgtgagcctttcgtgtatcatcttgatgcatgtttacgactgtgttt-gagttttaatttgtgcactactctga 9384927  T
Q  198 aacttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttg-ttttgtttgaaggtaacttcatttcattgtgt 296  Q
    | |||||||||||||||||||||||  ||||||||||||||| | ||||||| ||  |||||||||| |||| ||| ||||||||||||||| |||||||    
T  9384926 agcttttaagcaaagagttaggtagaatgtaaactgcaccaatgttgtgaagcacggtgtttagttgttttttttttaaggtaacttcatttgattgtgt 9384827  T
Q  297 ttgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    |||||  |||||||||||| |||||||||||| |||| ||||||||||||| ||||||||||| | ||||| ||||||||||||||||||    
T  9384826 ttgtatattgagaatcacaggggttgtgatcatttgttagggagtgagatgggatctcagatc-aagagttcctaggttgaagtcagtac 9384738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 23 - 367
Target Start/End: Complemental strand, 32452475 - 32452131
Alignment:
Q  23 tgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcattt-gaagaatagatcatctagggttttgagtctgtt 121  Q
    ||||| |||||||||| |||||||||||||| |  |||||||||||||  |||||||||||||||| |||||||| ||  | || |||||||||||||||    
T  32452475 tgacccgtattgcttcagtatttaaacaagagtgaaagacctagagaattattcaagccgtcattttgaagaatatattgtttaaggttttgagtctgtt 32452376  T
Q  122 -tatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaaacttttaagcaaagagttaggt 220  Q
     | |||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||||||||||||| |||| |||||||||||||||||||||    
T  32452375 atttgtgagcctttcgtgtatcatcttgatgcatgtttaggattgtgttt-gagttgtaatttgtgcactactttgaagcttttaagcaaagagttaggt 32452277  T
Q  221 agtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttg-tttgaaggtaacttcatttcattgtgtttgtagtttgagaatcacaaggg 319  Q
    |||||||||||| |||||||| ||||||||||  ||  ||||||||||| ||| ||||||||||||||| ||||||| |||| | ||||||||| |  ||    
T  32452276 agtttgtaaactacaccaaagttgtgaagtacggtgaatagttgttttgttttaaaggtaacttcatttgattgtgtctgtaatctgagaatcata--gg 32452179  T
Q  320 ttgtgatcagttgtaagggagtgagatgagatctcagatctaggagtt 367  Q
     |||||||| |||||||||||||||||| |||||||||||||||||||    
T  32452178 gtgtgatcatttgtaagggagtgagatgggatctcagatctaggagtt 32452131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 1 - 386
Target Start/End: Original strand, 15002809 - 15003197
Alignment:
Q  1 ttctgaagcccaacaagattta-tgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcattt-gaagaataga 98  Q
    |||||||||||||||| || || ||||| |||||||||| |||||||||||||||| ||||||||| || |  |||| ||||| ||||| ||| ||||||    
T  15002809 ttctgaagcccaacaaaatgtactgacccgtattgcttcagtatttaaacaagactggaagacctaaaggattattccagccgacattttgaataataga 15002908  T
Q  99 tcatctagggttttgagtctgtttat-gtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctga 197  Q
    |  | |||| |||||||||||||  | |||||||||| |||||||||||||||| ||||||||||||||| || |||||||| |||||||||||||||      
T  15002909 ttgtttaggattttgagtctgttagttgtgagccttttgtgtatcatcttgatgcatgtttaggattgtgctt-gagttgtaatttgtgcactactctag 15003007  T
Q  198 aacttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttt-tgtttgaaggtaacttcatttcattgtgt 296  Q
    | |||||||||||| ||||||||| ||||| |||| ||||||| |||||||| ||  || |||||||||| |||||||||||||||| |||| |||||||    
T  15003008 agcttttaagcaaaaagttaggtattttgtgaactacaccaaatctgtgaagcacggtgattagttgtttgtgtttgaaggtaactttatttgattgtgt 15003107  T
Q  297 ttgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
     ||||  || ||||||| |  ||  ||||||| |||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||    
T  15003108 ctgtaaattcagaatcatagaggcagtgatcatttgtaagggagtgagatgagatctcaaatctaggagttcctatgttgaagtcagtac 15003197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 155 - 386
Target Start/End: Complemental strand, 15038701 - 15038471
Alignment:
Q  155 gtttaggattgtgttttgagttgtattttgtgcactactctgaaacttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaa 254  Q
    |||||||| ||||||| |||||||| |||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||      
T  15038701 gtttaggactgtgttt-gagttgtaatttgtgcactactctgaagcttttaagcaaagatttaggtagtttgtaaactgcaccaaagctgtgaagtacgg 15038603  T
Q  255 tgtttagttgttttgtttgaaggtaacttca-tttcattgtgtttgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatct 353  Q
    | || |||||| ||||||||||||||||||| ||| ||||| |||||| |||||| |||| | ||| | ||||||||||||| ||||||||||| |||||    
T  15038602 tattcagttgtattgtttgaaggtaacttcattttgattgtatttgta-tttgagtatcataggggctatgatcagttgtaatggagtgagatgggatct 15038504  T
Q  354 cagatctaggagttactaggttgaagtcagtac 386  Q
    |||||||||||||||||||||||||||||||||    
T  15038503 cagatctaggagttactaggttgaagtcagtac 15038471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 57 - 265
Target Start/End: Complemental strand, 20003556 - 20003347
Alignment:
Q  57 gaagacctagagaagaattcaagccgtcattt-gaagaatagatcatctagggttttgagtctgtt-tatgtgagcctttcgtgtatcatcttgatgtat 154  Q
    ||||||||||||||  |||||||||||||||| |||||| ||||||| |  ||||||||||||||| | ||||||||||||||||||||| |||||| ||    
T  20003556 gaagacctagagaattattcaagccgtcattttgaagaagagatcatatgaggttttgagtctgttatttgtgagcctttcgtgtatcattttgatgcat 20003457  T
Q  155 gtttaggattgtgttttgagttgtattttgtgcactactctgaaacttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaa 254  Q
    |||||||| ||||||| ||||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20003456 gtttaggactgtgttt-gagttgtaaattgtgcactactctgaagcttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaa 20003358  T
Q  255 tgtttagttgt 265  Q
    |||||||||||    
T  20003357 tgtttagttgt 20003347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 116; E-Value: 7e-59
Query Start/End: Original strand, 33 - 301
Target Start/End: Original strand, 15003975 - 15004245
Alignment:
Q  33 tgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcattt-gaagaatagatcatctagggttttgagtctgtt-tatgtgagc 130  Q
    |||||| |||||||||||||||| ||||||||| || |  |||||| | | ||||| |||||||||||  | |||| ||||||||||||| | |||||||    
T  15003975 tgcttcagtatttaaacaagactggaagacctaaaggattattcaaactgacattttgaagaatagattgtttaggattttgagtctgttatttgtgagc 15004074  T
Q  131 ctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaaacttttaagcaaagagttaggtagtttgtaaa 230  Q
    ||||||| ||||||||||||| |||||||||| |||| || |||||||| ||||||||||||||||||  ||||||||||||||||||||||||| | ||    
T  15004075 ctttcgtatatcatcttgatgcatgtttaggactgtgctt-gagttgtaatttgtgcactactctgaagtttttaagcaaagagttaggtagtttttgaa 15004173  T
Q  231 ctgcaccaaagctgtgaagtacaatgtttagttgttt-tgtttgaaggtaacttcatttcattgtgtttgta 301  Q
    || |||||||||||||||| ||  || |||||||||| ||||||||||||| ||||||| ||||||| ||||    
T  15004174 ctacaccaaagctgtgaagcacggtgattagttgtttgtgtttgaaggtaaattcatttgattgtgtctgta 15004245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 297 - 386
Target Start/End: Complemental strand, 20003350 - 20003261
Alignment:
Q  297 ttgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    ||||| |||||||||||||  || ||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||| |||||    
T  20003350 ttgtaatttgagaatcacagaggatgtgatcagttgtaagggagtgagatgggatctcaaatctaggagttcctaggttgaagtaagtac 20003261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 259 - 382
Target Start/End: Original strand, 21323181 - 21323305
Alignment:
Q  259 tagttgttttgtttgaaggtaacttcat--ttcattgtgtttgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcag 356  Q
    ||||||||||||||||||||||||||||  ||  ||||||||||| | ||| ||||||| |||||||| |   ||| | || ||||||||||||||||||    
T  21323181 tagttgttttgtttgaaggtaacttcatcttttgttgtgtttgtaatctgataatcacatgggttgtggttcattg-agggaagtgagatgagatctcag 21323279  T
Q  357 atctaggagttactaggttgaagtca 382  Q
    ||||||||||| ||||||||||||||    
T  21323280 atctaggagttcctaggttgaagtca 21323305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 267 - 382
Target Start/End: Original strand, 16309270 - 16309389
Alignment:
Q  267 ttgtttgaaggtaacttcatttcatt-----gtgtttgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatcta 361  Q
    |||||||||||||||||||| | |||     |||||||||   ||| ||||||||||||| ||||  || ||| ||||||||||||||||||||||||||    
T  16309270 ttgtttgaaggtaacttcatctgatttgtttgtgtttgtaacctgataatcacaagggttatgattggtcgta-gggagtgagatgagatctcagatcta 16309368  T
Q  362 ggagttactaggttgaagtca 382  Q
     ||||| ||||||||||||||    
T  16309369 cgagttcctaggttgaagtca 16309389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 339 - 384
Target Start/End: Original strand, 18152694 - 18152739
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtcagt 384  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||    
T  18152694 agtgagatgagatctcagatctaggagttcctaggttgaagtcagt 18152739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 17855366 - 17855324
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  17855366 agtgagatgagatctcagatctaggagttcctaggttgaagtc 17855324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 339 - 381
Target Start/End: Original strand, 20470191 - 20470233
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  20470191 agtgagatgagatctcagatctaggagttcctaggttgaagtc 20470233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 303 - 381
Target Start/End: Original strand, 26965522 - 26965600
Alignment:
Q  303 tttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||| ||||||| ||||||||||   ||||| |  ||||||||| ||||||||||||||||||| |||||||||||||    
T  26965522 tttgataatcacaggggttgtgattgattgtaggatagtgagatgggatctcagatctaggagttcctaggttgaagtc 26965600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 13195495 - 13195453
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  13195495 agtgagatgggatctcagatctaggagttcctaggttgaagtc 13195453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 381
Target Start/End: Original strand, 17864413 - 17864455
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  17864413 agtgagatgggatctcagatctaggagttcctaggttgaagtc 17864455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 33665965 - 33665923
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||||||||||||||||||||||| || ||||||||||    
T  33665965 agtgagatgagatctcagatctaggagttccttggttgaagtc 33665923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 378
Target Start/End: Complemental strand, 28623720 - 28623660
Alignment:
Q  318 ggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaa 378  Q
    |||||||||  |||||| |  ||||||||||||||||| ||||||||||| ||||||||||    
T  28623720 ggttgtgattggttgtaggatagtgagatgagatctcaaatctaggagttcctaggttgaa 28623660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 382
Target Start/End: Original strand, 20764982 - 20765025
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtca 382  Q
    ||||||||||||||||||||||| |||||  |||||||||||||    
T  20764982 agtgagatgagatctcagatctaagagttcttaggttgaagtca 20765025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 378
Target Start/End: Original strand, 21723396 - 21723435
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaa 378  Q
    ||||||||| ||||||||||||||||||| ||||||||||    
T  21723396 agtgagatgggatctcagatctaggagttcctaggttgaa 21723435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 378
Target Start/End: Complemental strand, 25805624 - 25805585
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaa 378  Q
    ||||||||| ||||||||||||||||||| ||||||||||    
T  25805624 agtgagatgggatctcagatctaggagttcctaggttgaa 25805585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Original strand, 9281696 - 9281738
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||||| ||||||||||| |||||||||||||    
T  9281696 agtgagatgggatctcaaatctaggagttcctaggttgaagtc 9281738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 11960654 - 11960612
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||||||| |||||| |||||||| |||||||||||||    
T  11960654 agtgagatgagatatcagatgtaggagttcctaggttgaagtc 11960612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 343 - 381
Target Start/End: Complemental strand, 17234759 - 17234721
Alignment:
Q  343 agatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||||||||||||| |||||||||||||    
T  17234759 agatgagatatcagatctaggagttcctaggttgaagtc 17234721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 20558473 - 20558431
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||||||||||| |||||||||||  ||||||||||||    
T  20558473 agtgagatgagatctcatatctaggagttcttaggttgaagtc 20558431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Original strand, 20989753 - 20989795
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    |||||||||||||||| |||||||||||| ||||||| |||||    
T  20989753 agtgagatgagatctcggatctaggagtttctaggttcaagtc 20989795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 25964866 - 25964824
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||| ||| ||||||||||||||||||| |||||||||||||    
T  25964866 agtgatatgggatctcagatctaggagttcctaggttgaagtc 25964824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 25969513 - 25969471
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||| ||| ||||||||||||||||||| |||||||||||||    
T  25969513 agtgatatgggatctcagatctaggagttcctaggttgaagtc 25969471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 25973953 - 25973911
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||| ||| ||||||||||||||||||| |||||||||||||    
T  25973953 agtgatatgggatctcagatctaggagttcctaggttgaagtc 25973911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 29 - 386
Target Start/End: Original strand, 16648 - 17007
Alignment:
Q  29 gtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcattt-gaagaatagatcatctagggttttgagtctgtt-tatgt 126  Q
    |||||||||| |||||||||||||||||||||||||||||||  |||||||| ||||||| ||||||||||||||||||||||||||||||||| | |||    
T  16648 gtattgcttcagtatttaaacaagactagaagacctagagaattattcaagctgtcattttgaagaatagatcatctagggttttgagtctgttatttgt 16747  T
Q  127 gagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaaacttttaagcaaagagttaggtagtttg 226  Q
    ||||||| |||||||||||||||||  ||||||||| || |||| ||||||||  |||||||||||||| ||  ||||||||||||||||||||||||||    
T  16748 gagccttgcgtgtatcatcttgatgcttgtttaggactgcgttt-gagttgtaagttgtgcactactctaaaggttttaagcaaagagttaggtagtttg 16846  T
Q  227 taaactgcaccaaagctgtgaagtacaatgtttagttgttttgttt-gaaggtaacttcatttcattgtgtttgtagtttgagaatcacaagggttgtga 325  Q
    ||||||||| ||||||||| ||||||  |||||| ||||||||||| |||||||||||||||| ||||| || ||| ||||||||||||| ||| |||||    
T  16847 taaactgcagcaaagctgtaaagtacggtgtttaattgttttgttttgaaggtaacttcatttgattgtattcgtaatttgagaatcacaggggctgtga 16946  T
Q  326 tcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    | |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  16947 ttagttgtaagggagtgagatgggatctcagatctaggagttcctaggttgaagtcagtac 17007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 23 - 386
Target Start/End: Complemental strand, 3607 - 3244
Alignment:
Q  23 tgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcatttgaagaatagatcatctagggttttgagtctgttt 122  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  3607 tgacctgtattgcttcagtatttaaacaagattagaagacctagagaattattcaagctgtcatttgaagaatagatcatctagggttttgagtcggttt 3508  T
Q  123 atgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaaacttttaagcaaagagttaggtag 222  Q
     ||||| ||||||| |||||||||||||| ||||||| || |||| ||||||||||| ||| |||||||||||||| ||||||||||||| |||||||||    
T  3507 gtgtgaacctttcgggtatcatcttgatgcatgtttaagactgtg-tttgagttgtaatttttgcactactctgaagcttttaagcaaagtgttaggtag 3409  T
Q  223 tttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgtttgaaggtaacttca-tttcattgtgtttgtagtttgagaatcacaagggtt 321  Q
    |||||||||| | |||||||||||||||||  ||||  ||||| ||||||||||||||||||| ||| ||||| |||||  |||||| |||||||||| |    
T  3408 tttgtaaacttccccaaagctgtgaagtacggtgttcggttgtgttgtttgaaggtaacttcattttgattgtatttgttatttgagtatcacaagggat 3309  T
Q  322 gtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    ||||||||||||||| |||||||||| ||||||| ||||||||||| |||||||||| |||||||    
T  3308 gtgatcagttgtaagagagtgagatgggatctcaaatctaggagttcctaggttgaaatcagtac 3244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 207; Significance: 1e-113; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 1 - 386
Target Start/End: Complemental strand, 18766189 - 18765800
Alignment:
Q  1 ttctgaagcccaacaagattta-tgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcattt-gaagaataga 98  Q
    ||||||||||||||||  |||| ||||| |||||||||| |||||||||||||||| ||||||||||||||  |||||||||||||||| ||||||||||    
T  18766189 ttctgaagcccaacaaagtttagtgacccgtattgcttcagtatttaaacaagactggaagacctagagaattattcaagccgtcattttgaagaataga 18766090  T
Q  99 tcatctagggttttgagtctgtt-tatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctga 197  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||| ||||||| ||||||||  ||||||||||||||||    
T  18766089 tcatctagggttttgagtctgttatttgtgagcctttcgtgtatcatcttgatgcatgtttaggactgtgttt-gagttgtaagttgtgcactactctga 18765991  T
Q  198 aacttttaagcaaagagttaggtagttt-gtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgttt-gaaggtaacttcatttcattgtg 295  Q
    | ||||||||||||||||||  |||||| | ||||||||||||||||| |||||||  ||||||||||||| |||| |||||||||||||||| ||| |     
T  18765990 agcttttaagcaaagagttatatagttttgcaaactgcaccaaagctgagaagtacggtgtttagttgtttagttttgaaggtaacttcatttaattatt 18765891  T
Q  296 tttgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    |||||| ||||| ||||||| ||| |||||| |||||||| ||| ||||||| ||||||||||||| ||||| |||||||||||| |||||    
T  18765890 tttgtaatttgaaaatcacatgggctgtgattagttgtaatggaatgagatgggatctcagatctacgagttcctaggttgaagttagtac 18765800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 1 - 386
Target Start/End: Complemental strand, 29566523 - 29566135
Alignment:
Q  1 ttctgaagcccaacaagattta-tgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcattt-gaagaataga 98  Q
    ||||||||||||||||  | || || || ||||||||||  ||||||||||||||| ||||||||| ||||  ||||| |||||||||| ||||||||||    
T  29566523 ttctgaagcccaacaaagtgtactggcccgtattgcttcattatttaaacaagactggaagacctaaagaattattcatgccgtcattttgaagaataga 29566424  T
Q  99 tcatctagggttttgagtctgtt-tatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctga 197  Q
    |  | |||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||| ||||||| |||||||| ||||||||||||| |||    
T  29566423 ttgtttagggttttgagtctgttatttgtgagcctttcgtgtatcatcttgatgcatgtttaggactgtgttt-gagttgtaatttgtgcactactatga 29566325  T
Q  198 aacttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgttt-gaaggtaacttcatttcattgtgt 296  Q
    | ||||||||||||||||||||||||||||||||| |||||||||||||||| ||  |  ||||||||||||||| |||||||||||||||| |||||||    
T  29566324 agcttttaagcaaagagttaggtagtttgtaaactacaccaaagctgtgaagcacggttgttagttgttttgttttgaaggtaacttcatttgattgtgt 29566225  T
Q  297 ttgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
     ||||  |||| ||||||| ||| |||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  29566224 ctgtaaattgaaaatcacaggggctgtgatcatttgtaagggagtgagatgggatctcagatctaggagtttctaggttgaagtcagtac 29566135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 1 - 386
Target Start/End: Original strand, 13314613 - 13315001
Alignment:
Q  1 ttctgaagcccaacaagattta-tgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcattt-gaagaataga 98  Q
    ||||||||||||||||  | || |||||  ||||||||| |||||||||||||||| ||||||||| ||||  |||||||||||||||| ||||||||||    
T  13314613 ttctgaagcccaacaaagtgtactgacccatattgcttcagtatttaaacaagactggaagacctaaagaattattcaagccgtcattttgaagaataga 13314712  T
Q  99 tcatctagggttttgagtctgtt-tatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctga 197  Q
    |  | |||||||||||||||||| | |||||||||||||| ||||||||||||| |||||||||| ||||||| || |||||  ||||||||||||||||    
T  13314713 ttgtttagggttttgagtctgttatttgtgagcctttcgtttatcatcttgatgcatgtttaggactgtgttt-gaattgtaacttgtgcactactctga 13314811  T
Q  198 aacttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgttt-gaaggtaacttcatttcattgtgt 296  Q
    | ||||||||||||||||| ||||  ||||||||| |||||||||||||||| ||| |  ||||||||||||||| |||||||||||||||| |||||||    
T  13314812 agcttttaagcaaagagttgggtaaattgtaaactacaccaaagctgtgaagaacagttgttagttgttttgttttgaaggtaacttcatttgattgtgt 13314911  T
Q  297 ttgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
     ||||   ||||||||||| ||| |||||||| ||| |||||||||||||| ||||||||||||||||||| || | |||||||||||||    
T  13314912 ctgtaaactgagaatcacatgggctgtgatcatttggaagggagtgagatgggatctcagatctaggagttccttgattgaagtcagtac 13315001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 18606246 - 18606379
Alignment:
Q  1 ttctgaagcccaacaagatttatgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcatttgaagaatagatc 100  Q
    |||||||||||||||||||| |||||| ||||||||||  ||||||||||||||| ||||||||||||||| |||||  ||||||||| ||||||| |||    
T  18606246 ttctgaagcccaacaagattaatgacccgtattgcttcaatatttaaacaagactggaagacctagagaagtattcagaccgtcatttaaagaataaatc 18606345  T
Q  101 atctagggttttgagtctgtttatgtgagccttt 134  Q
    |||||| |||||||||||||||||||||||||||    
T  18606346 atctagagttttgagtctgtttatgtgagccttt 18606379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 339 - 386
Target Start/End: Complemental strand, 27111250 - 27111203
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||    
T  27111250 agtgagatgagatctcagatctaggagttcctaggttgaagtaagtac 27111203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 381
Target Start/End: Original strand, 21250116 - 21250228
Alignment:
Q  268 tgtttgaaggtaacttcatttcattgtgtttgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagtt 367  Q
    ||||||||||||||||||||   ||||||||  | | ||| ||||||| ||| ||||||   ||||| |  ||||||||||||||||||||||||||| |    
T  21250116 tgtttgaaggtaacttcattattttgtgtttaaa-tatgataatcacaggggctgtgattgattgtaggatagtgagatgagatctcagatctaggagat 21250214  T
Q  368 actaggttgaagtc 381  Q
     |||||||||||||    
T  21250215 cctaggttgaagtc 21250228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 378
Target Start/End: Original strand, 26860284 - 26860323
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaa 378  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  26860284 agtgagatgagatctcagatctaggagttcctaggttgaa 26860323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 386
Target Start/End: Complemental strand, 27107681 - 27107634
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    ||||||| ||||||||| ||||||||||| ||||||||||||||||||    
T  27107681 agtgagacgagatctcaaatctaggagttcctaggttgaagtcagtac 27107634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 12910661 - 12910619
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  12910661 agtgagatgggatctcagatctaggagttcctaggttgaagtc 12910619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 22611064 - 22611022
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  22611064 agtgagatgggatctcagatctaggagttcctaggttgaagtc 22611022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 23758797 - 23758755
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  23758797 agtgagatgggatctcagatctaggagttcctaggttgaagtc 23758755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 381
Target Start/End: Original strand, 36398782 - 36398824
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  36398782 agtgagatgggatctcagatctaggagttcctaggttgaagtc 36398824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 386
Target Start/End: Original strand, 20649547 - 20649592
Alignment:
Q  341 tgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    ||||||||||||||| ||||||||||| ||||||||||| ||||||    
T  20649547 tgagatgagatctcaaatctaggagttcctaggttgaagccagtac 20649592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 339 - 383
Target Start/End: Original strand, 19198267 - 19198311
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtcag 383  Q
    ||||||||| ||||||||||||||| ||| |||||||||||||||    
T  19198267 agtgagatgggatctcagatctaggcgttcctaggttgaagtcag 19198311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 386
Target Start/End: Complemental strand, 12952643 - 12952596
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    ||||||||| |||||||| |||||||| | ||||||||||||||||||    
T  12952643 agtgagatgggatctcaggtctaggagctcctaggttgaagtcagtac 12952596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 382
Target Start/End: Original strand, 20475264 - 20475307
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtca 382  Q
    ||||||||| ||||||||||||||||| | ||||||||||||||    
T  20475264 agtgagatgggatctcagatctaggagctcctaggttgaagtca 20475307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 382
Target Start/End: Original strand, 20476565 - 20476608
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtca 382  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||||    
T  20476565 agtgagatgggatctcagatctaagagtttctaggttgaagtca 20476608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 382
Target Start/End: Complemental strand, 31587646 - 31587603
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtca 382  Q
    |||| |||||||||| ||||||||||||| ||||||||||||||    
T  31587646 agtgggatgagatctaagatctaggagttcctaggttgaagtca 31587603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Original strand, 24790146 - 24790188
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||| ||| ||||||||||||||||||| |||||||||||||    
T  24790146 agtgatatgggatctcagatctaggagttcctaggttgaagtc 24790188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 386
Target Start/End: Complemental strand, 36808 - 36421
Alignment:
Q  1 ttctgaagcccaacaagattta-tgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcattt-gaagaataga 98  Q
    ||||||||||||||||  | || ||||| |||||||||| |||||||||||||||| ||||||||| ||||  |||||| ||||||||| ||||||||||    
T  36808 ttctgaagcccaacaaagtgtactgacccgtattgcttcagtatttaaacaagactggaagacctaaagaattattcaaaccgtcattttgaagaataga 36709  T
Q  99 tcatctagggttttgagtctgtt-tatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctga 197  Q
    |  | ||||||||||||| |||| | |||||||||||||| ||||||||||||| |||||||||| ||||||| |||||||| |||||||||||||| ||    
T  36708 ttgtttagggttttgagtttgttatttgtgagcctttcgtatatcatcttgatgcatgtttaggactgtgttt-gagttgtaatttgtgcactactccga 36610  T
Q  198 aacttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgtt-tgaaggtaacttcatttcattgtgt 296  Q
    | ||||||||||||||||||||||||||||||||| |||||||||||||||| ||  || |||||||||||||| ||||||||||||||||| |||||||    
T  36609 agcttttaagcaaagagttaggtagtttgtaaactacaccaaagctgtgaagcacggtgattagttgttttgttctgaaggtaacttcatttgattgtgt 36510  T
Q  297 ttgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
     | || | ||||||||||| ||| |||||| | |||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||    
T  36509 ctataatctgagaatcacaggggctgtgattatttgtaagggagtgagatg-ggtctcagatctaggagttcctaggttgaagtcagtac 36421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 157; Significance: 2e-83; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 29 - 386
Target Start/End: Complemental strand, 103588 - 103229
Alignment:
Q  29 gtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcattt-gaagaatagatcatctagggttttgagtctgtt-tatgt 126  Q
    |||||||||| |||||||||||||| ||||||| ||| ||||  ||||||||| |||||| ||||||||||| || ||||||||||||| |||| | |||    
T  103588 gtattgcttcagtatttaaacaagattagaagatctaaagaactattcaagccatcattttgaagaatagattatttagggttttgagtatgttatttgt 103489  T
Q  127 gagcctttcgtgtatcatcttgatgtatgtttaggattgtgttttgagttgtattttgtgcactactctgaaacttttaagcaaagagttaggtagtttg 226  Q
    ||||  ||||| || |||||||||| || |||| || ||||||| ||||| || ||||| |||||||||||| ||||||||||||||||||||||| |||    
T  103488 gagctgttcgtttaacatcttgatgcatatttaagactgtgttt-gagttataatttgttcactactctgaagcttttaagcaaagagttaggtagattg 103390  T
Q  227 taaactgcaccaaagctgtgaagtacaatgtttagttgttttgttt-gaaggtaacttcatttcattgtgtttgtagtttgagaatcacaagggttgtga 325  Q
    |||||| |||||||||||| ||| ||  |  ||||||||||||||| ||| |||||||||||| ||||||| ||||   ||||||| ||| |||||||||    
T  103389 taaactacaccaaagctgttaagcacggttgttagttgttttgttttgaatgtaacttcatttgattgtgtctgtaaactgagaattacaggggttgtga 103290  T
Q  326 tcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtcagtac 386  Q
    ||| |||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||    
T  103289 tcatttgtaagggagtgagaagggatctcagatctaggagttcctaggttgaagtcagtac 103229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0645 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0645
Description:

Target: scaffold0645; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 23 - 99
Target Start/End: Complemental strand, 1531 - 1455
Alignment:
Q  23 tgacctgtattgcttcggtatttaaacaagactagaagacctagagaagaattcaagccgtcatttgaagaatagat 99  Q
    |||||||||||||||| || ||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||    
T  1531 tgacctgtattgcttcagtgtttaaacaagactggaagacctagagaatcattcaagccgtcatttgaagaatagat 1455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 44; Significance: 6e-16; HSPs: 3)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 104 - 378
Target Start/End: Original strand, 52675 - 52954
Alignment:
Q  104 tagggttttgagtc--tgtttatgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttt--tgagttgtattttgtgcactactctgaaa 199  Q
    ||||||||||||||  ||||| |||||||||||| |||||||  |||||  ||||| |||| | | |||  |||||||||  ||||  |||||||  ||     
T  52675 tagggttttgagtcattgtttttgtgagcctttcatgtatcacattgatacatgttaaggactttttttattgagttgtaagttgtatactactccaaag 52774  T
Q  200 cttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgtttgaaggtaacttcat--ttcattgtgtt 297  Q
    || | ||||| |||| ||||||||||||  ||| | ||||| |||||||| ||   |||  || |||||||||||||||||||||||  ||  ||||| |    
T  52775 ctgtgaagcacagaggtaggtagtttgttcactactccaaaactgtgaagcacggagttaggtagttttgtttgaaggtaacttcatcttttgttgtggt 52874  T
Q  298 tgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaa 378  Q
      ||   ||| ||||||| |||  |||||  |||||| |||||||||||| ||||||||||||||||||| ||||||||||    
T  52875 gataacctgataatcacaggggcagtgattggttgta-gggagtgagatgggatctcagatctaggagttcctaggttgaa 52954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 382
Target Start/End: Original strand, 45778 - 45897
Alignment:
Q  264 gttttgtttgaaggtaacttcat--ttcattgtgtttgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatcta 361  Q
    ||||||||| |||||||||||||  ||  |||||||  || | ||| ||| ||||||| ||| || ||||||| |||||| ||||| ||||||||||| |    
T  45778 gttttgttttaaggtaacttcatcttttgttgtgttgataatgtgataatgacaagggctgtaattagttgta-gggagtaagatgggatctcagatcaa 45876  T
Q  362 ggagttactaggttgaagtca 382  Q
    ||||||  |||||||||||||    
T  45877 ggagttcttaggttgaagtca 45897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 65
Target Start/End: Original strand, 52570 - 52635
Alignment:
Q  1 ttctgaagcccaacaagat-ttatgacctgtattgcttcggtatttaaacaagactagaagaccta 65  Q
    ||||||||||||||||||| |||| ||| |||||||||| ||||  | ||||||||| ||||||||    
T  52570 ttctgaagcccaacaagatgttataacccgtattgcttcagtataaatacaagactacaagaccta 52635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 4 - 382
Target Start/End: Complemental strand, 11699 - 11316
Alignment:
Q  4 tgaagcccaacaagat-ttatgacctgtattgcttcggtatttaaacaagactagaagacc-tagagaagaattcaagccgtcatttgaagaatagatca 101  Q
    |||| ||||||||||  |||| ||| |||||||||| |||| |||||||||||| |||||| ||   | || |||| ||||||||| ||||  ||||||     
T  11699 tgaatcccaacaagaagttataacccgtattgcttcagtatataaacaagactacaagaccatattcacga-ttcaggccgtcatt-gaagtttagatct 11602  T
Q  102 tctagggttttgagtctgt-tta--tgtgagcctttcgtgtatcatcttgatgtatgtttaggattgtgttt--tgagttgtattttgtgcactactctg 196  Q
    | ||||||||||||||| | |||  |||||||||||||||||||| ||||||| ||||| | ||||| ||||  || ||||||    || |||||||| |    
T  11601 t-tagggttttgagtctatgttaattgtgagcctttcgtgtatcaccttgatgcatgttaaagattgagtttattgtgttgtaaag-gttcactactccg 11504  T
Q  197 aaacttttaagcaaagagttaggtagtttgtaaactgcaccaaagctgtgaagtacaatgtttagttgttttgtttgaaggtaacttcat----ttcatt 292  Q
    ||  | | |||||| ||| ||||||| ||||  ||| |||||||||||||||| |  |||||  || |||| ||||||||||||||||||    ||  ||    
T  11503 aagttgtgaagcaaggagctaggtagattgtgtactacaccaaagctgtgaagcaagatgttaggtagttt-gtttgaaggtaacttcatccttttgttt 11405  T
Q  293 gtgtttgtagtttgagaatcacaagggttgtgatcagttgtaagggagtgagatgagatctcagatctaggagttactaggttgaagtca 382  Q
    | ||||||| | ||| ||||||| ||| ||||||   ||||  || ||||||||| ||||||||||||||||||  ||||||||||||||    
T  11404 gagtttgtaatctgataatcacaggggctgtgattgattgtg-ggaagtgagatgggatctcagatctaggagtacctaggttgaagtca 11316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 339 - 381
Target Start/End: Original strand, 16201 - 16243
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||||||||||||||||||||||| |||||||||||||    
T  16201 agtgagatgagatctcagatctaggagttcctaggttgaagtc 16243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0505 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 382
Target Start/End: Original strand, 10024 - 10067
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtca 382  Q
    ||||||||||||||||||||||||||||| || |||||||||||    
T  10024 agtgagatgagatctcagatctaggagttcctcggttgaagtca 10067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 381
Target Start/End: Original strand, 17266 - 17308
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||||||||||||||||| ||||| |||||||||||||    
T  17266 agtgagatgagatctcagatctaagagtttctaggttgaagtc 17308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 35; Significance: 0.0000000001; HSPs: 3)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 381
Target Start/End: Original strand, 7528 - 7570
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  7528 agtgagatgggatctcagatctaggagttcctaggttgaagtc 7570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Original strand, 18115 - 18157
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    |||| |||| ||||||||||||||||||| |||||||||||||    
T  18115 agtgtgatgggatctcagatctaggagttcctaggttgaagtc 18157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Original strand, 27509 - 27551
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    |||| |||| ||||||||||||||||||| |||||||||||||    
T  27509 agtgtgatgggatctcagatctaggagttcctaggttgaagtc 27551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 37177 - 37135
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  37177 agtgagatgggatctcagatctaggagttcctaggttgaagtc 37135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 381
Target Start/End: Original strand, 61461 - 61503
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  61461 agtgagatgggatctcagatctaggagttcctaggttgaagtc 61503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 339 - 380
Target Start/End: Original strand, 48332 - 48373
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagt 380  Q
    ||||||||||||||| ||||||||||||| ||||||||||||    
T  48332 agtgagatgagatcttagatctaggagttcctaggttgaagt 48373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 339 - 381
Target Start/End: Original strand, 12498 - 12540
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||||||||||||||||| |||||||||||||    
T  12498 agtgagatgggatctcagatctaggagtttctaggttgaagtc 12540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 339 - 380
Target Start/End: Complemental strand, 5589 - 5548
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagt 380  Q
    ||||||||| ||||||||||||||||||| ||||||||||||    
T  5589 agtgagatgggatctcagatctaggagttcctaggttgaagt 5548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0423 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 382
Target Start/End: Complemental strand, 13778 - 13735
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtca 382  Q
    |||||||||||||||||| |||| ||||| ||||||||||||||    
T  13778 agtgagatgagatctcaggtctatgagttcctaggttgaagtca 13735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 339 - 378
Target Start/End: Complemental strand, 40506 - 40467
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaa 378  Q
    ||||||||| ||||||||||||||||||| ||||||||||    
T  40506 agtgagatgggatctcagatctaggagttcctaggttgaa 40467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Original strand, 25661 - 25703
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| |||||||||||||||||||  ||||||||||||    
T  25661 agtgagatgggatctcagatctaggagttcgtaggttgaagtc 25703  T

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Target: scaffold0037 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Original strand, 110244 - 110286
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||||| ||||||||||| |||||||||||||    
T  110244 agtgagatgggatctcaaatctaggagttcctaggttgaagtc 110286  T

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Target: scaffold0015 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 202565 - 202523
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| |||||||||||||| |||| |||||||||||||    
T  202565 agtgagatgggatctcagatctagaagttcctaggttgaagtc 202523  T

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Target: scaffold0006 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 381
Target Start/End: Complemental strand, 87907 - 87865
Alignment:
Q  339 agtgagatgagatctcagatctaggagttactaggttgaagtc 381  Q
    ||||||||| ||||||||||||||||||| || ||||||||||    
T  87907 agtgagatgggatctcagatctaggagttcctgggttgaagtc 87865  T

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Target: scaffold0185 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 344 - 381
Target Start/End: Original strand, 2351 - 2388
Alignment:
Q  344 gatgagatctcagatctaggagttactaggttgaagtc 381  Q
    |||| ||||||||||||||||||| |||||||||||||    
T  2351 gatgggatctcagatctaggagttcctaggttgaagtc 2388  T

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