View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2696_low_35 (Length: 384)
Name: NF2696_low_35
Description: NF2696
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2696_low_35 |
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Alignment Details
Target: chr8 (Bit Score: 303; Significance: 1e-170; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 303; E-Value: 1e-170
Query Start/End: Original strand, 44 - 366
Target Start/End: Original strand, 34134020 - 34134342
Alignment:
| Q |
44 |
tagagttgatcccggtgtcgggcctaacaatattttctttcaattgcagtaagtgaatgatctgagaagtcgtcaactgatctaaagttggcggctgctg |
143 |
Q |
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| T |
34134020 |
tagagttgatcccggtgtcggacctaacaatattttctttcaattgcagtaagtgaatgatctgagaagtcgtcaactgatctaaagttggcggctgctg |
34134119 |
T |
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| Q |
144 |
agaaacaagatttccttgtggattttgattagggcttggtgcaaagccgaaacgatcaggattggacagaacctcttgaatgatttcaggatcaaggtat |
243 |
Q |
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||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34134120 |
agaaacaagatgtccttgtggattttgattagggcttggtgcaaagccgaaacgatcaggattggacagaacctcttgaatgatttcaggatcaaggtat |
34134219 |
T |
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| Q |
244 |
ttaatcagttcattcttcaccttcttgagttcatcttgaacatccttcaaagtcttttcaagaaaggatgcaggaccaacaacgccataaacgttgtccc |
343 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
34134220 |
ttaatcagttcattcttcaccttcttgagttcatcttgaacatccttcaacgtcttttcaagaaaggatgcaggaccaacaacgccataaacattgtccc |
34134319 |
T |
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| Q |
344 |
ttaaacgcgcctcagcctgatac |
366 |
Q |
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| ||||||||||||||||||||| |
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| T |
34134320 |
tcaaacgcgcctcagcctgatac |
34134342 |
T |
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