View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2696_low_37 (Length: 372)
Name: NF2696_low_37
Description: NF2696
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2696_low_37 |
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Alignment Details
Target: chr8 (Bit Score: 324; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 1 - 357
Target Start/End: Complemental strand, 42142019 - 42141663
Alignment:
| Q |
1 |
gcccaaaaaatatgttcaaagggggnnnnnnngtaaagaattttggcgccatttttcctatatactgagcccccatttctccattggagcttctcacaca |
100 |
Q |
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| T |
42142019 |
gcccaaaaaatatgttcaaagggggaaaaaaagtaaagaattttggcgccatttttcctatacactgagcccccatttctccattggagcttctcacaca |
42141920 |
T |
|
| Q |
101 |
ttcctccgtcaaaccctagctcgcagctccacgcaaatccaaatctcgttccaatggcttcaactcccaagaagcttcttcaatctccctcctcaaaatc |
200 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42141919 |
ttcctccatcaaaccctagctcgcagctccacgcaaatccaaatcccgttccaatggcttcaactcccaagaagcttcttcaatctccctcctcaaaatc |
42141820 |
T |
|
| Q |
201 |
caacatccgttcacaattctcacctctcactcctcattccttacctacacgcagatccacgcgcttgaactccgattctcccataacccccaatgtcatc |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42141819 |
caacatccgttcacaattctcacctctcactcctcattccttacctacacgcagatccacgcgcttgaactccgattctcccataacccccaatgtcatc |
42141720 |
T |
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| Q |
301 |
gccgaatctcaaattcaacaatcaactccgagaagagggagaagaatcggggagaat |
357 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42141719 |
gccgaatctcaaattcaacaatcaactccgagaagagggagaagaatcggggagaat |
42141663 |
T |
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