View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2696_low_53 (Length: 304)
Name: NF2696_low_53
Description: NF2696
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2696_low_53 |
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Alignment Details
Target: chr2 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 7 - 286
Target Start/End: Original strand, 37558577 - 37558856
Alignment:
| Q |
7 |
aaaaatatataatcaaaccttccgaagccatgtcaaatttaaggcctgtaaaataatcttactatagcaataataagaacatgtaagttttaaaattgga |
106 |
Q |
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| T |
37558577 |
aaaaatatataatcaaaccttccgaagccatgtcaaatttaaggcctgtaaaataatcttactatagcaataataagaacatgtaagttttaaaattgga |
37558676 |
T |
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| Q |
107 |
cccaataagaataatgctattgccaataaccatttgcgaattatcatctcacaaaatcaaaatctcttgtatcagccaacaatagaaaatctgcatacaa |
206 |
Q |
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| T |
37558677 |
cccgataagaataatgctattgccaataaccatttgcgaattatcatctcacaaaatcaaaatctcttgtatcagccaacaatagaaaatctgcatacaa |
37558776 |
T |
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| Q |
207 |
tctaatgaaaatttaaatcagttgtagaaagttctaccagaatatcactcgaccctatgatcatttgtgaacaatgtaca |
286 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37558777 |
tctactgaaaatttaaatcagttgtagaaagttctaccagaatatcactcgaccctatgatcatttgtgaacaatgtaca |
37558856 |
T |
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