View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2696_low_65 (Length: 268)
Name: NF2696_low_65
Description: NF2696
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2696_low_65 |
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Alignment Details
Target: chr6 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 17 - 235
Target Start/End: Original strand, 776447 - 776665
Alignment:
| Q |
17 |
acaaatatgtataagccacaaatatttgcaacaacaatttgaaattacaggtagcctagtttacttgtcatggtcccatggtaatatcagcatcaaaatt |
116 |
Q |
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| T |
776447 |
acaaatatgtataagccacaaatatttgcaacaacaatttgaaattacaggtagcctagtttacttgtcatggtcccatggtaatatcagcatcaaaatt |
776546 |
T |
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| Q |
117 |
aaagcatgcttctaaattcagacatcgtggtccattttataatactatttaataattcaattcaatttttgttgtctattatattattttagcatcaaaa |
216 |
Q |
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|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
776547 |
aaagcatgcttctaaattcagacaacgtggtccattttataatactatttaataattcaattcaatttttgttgtctattatattatgttagcatcaaaa |
776646 |
T |
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| Q |
217 |
ttaaaacatgtttctttga |
235 |
Q |
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| T |
776647 |
ttaaaacatgtttctttga |
776665 |
T |
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