View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2696_low_8 (Length: 585)
Name: NF2696_low_8
Description: NF2696
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2696_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 482; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 482; E-Value: 0
Query Start/End: Original strand, 7 - 565
Target Start/End: Original strand, 3689045 - 3689615
Alignment:
| Q |
7 |
atatatatatttaattagatcaggtaatcaaaatgataataaggatgatggtatagttcataacttcatatcagatttcataaaaaagaattatcaatgg |
106 |
Q |
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| T |
3689045 |
atatatatatttaatttgatcaggtaatcaaaatgataataaggatgatggtatagttcataacttcatatcagatttcataaaaaagaattatcaatgg |
3689144 |
T |
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| Q |
107 |
ccagatataattaatgtgcctagctttcannnnnnnngtgttcgtcttgttatatacatatcttgatttgaaacaaaaattgaactcacttgatacaagt |
206 |
Q |
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| T |
3689145 |
ccagatataattaatgtgcctagctttcattttttttgtgttcgtcttgttatatacatatcttgatttgaaacaaaaattgaactcactagatacaagt |
3689244 |
T |
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| Q |
207 |
tgatgaaattatttattttggacatgaataccaatatga------------aattatctatcaatgtcaattttttctcagatggagggagcaccgaaag |
294 |
Q |
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| T |
3689245 |
tgatgaaattatttattttggacatgaataccaatatgaataaatgaatgaaattatctatcaatgtcaattttttctcagatggagggagcaccgaaag |
3689344 |
T |
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| Q |
295 |
ccgcagccgcagccattcagctaattcatttgcagaaccaactcatttgaaggaaacaatccaaactcaaccaaatggcataaaacttaatgaacaatct |
394 |
Q |
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| T |
3689345 |
ccgcagccgcagccattcagctaattcatttgcagaaccaactcatttgaaggaaacaatccaaactcaaccaaatggcataaaacttaatgaacaatct |
3689444 |
T |
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| Q |
395 |
gctgtagcggcaacaaaaaccgatcaaattccaattccaattaagaagtgtttgcctcaaatgccatatgtatcaacaaaagggaatggaccaaatggga |
494 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||| |
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| T |
3689445 |
gctgcagcggcaacaaaaaccgatcaaattccaattccaattaagaagtctttgcctcaaatgccatatgtatccacaaaagggaatggatcaaatggga |
3689544 |
T |
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| Q |
495 |
aagtagtgaatggatttttatacagatattcaaaatgtgatgaagttagcattgtttgtgtctgtcatgga |
565 |
Q |
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| T |
3689545 |
aagtagtgaatggatttttatacagatattcaaaatgtgatgaagttagcattgtttgtgtctgtcatgga |
3689615 |
T |
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