View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2697_high_24 (Length: 359)
Name: NF2697_high_24
Description: NF2697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2697_high_24 |
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Alignment Details
Target: chr4 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 16 - 343
Target Start/End: Original strand, 7710970 - 7711292
Alignment:
| Q |
16 |
attctccataaacatagcataaggtgaatcaagttaatataatctcattaaacaacttaatataagatgaacaaatatattacaaaccctnnnnnnnntg |
115 |
Q |
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| T |
7710970 |
attctccataaacatagcataaggtgaatcaagttaatataatctcattaaacaacttaatataagatgaacaaatatattacaaaccctaaaaaaa-tg |
7711068 |
T |
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| Q |
116 |
ttataataaattaagtttcttcaaaaaatattataaggtaaggaaacatacaaagccttaggaagagtttcctgagattgttgagcaaacaacaagcgat |
215 |
Q |
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| T |
7711069 |
ttataa---attaagtttcttcaaaa-atattataaggtaaggaaacatacaaagccttaggaagagtttcctgagattgttgagcaagcaacaagcgat |
7711164 |
T |
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| Q |
216 |
gagatccatttggaagggtttgtttccacttgaagaagcaagctaatccatagcctaaggtacctaaaccccacacaaagaagactaaattgatcacctt |
315 |
Q |
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| T |
7711165 |
gagatccatttggaagggtttgtttccacttgaagaagcaagctaatccatagcctaaggtacctaaaccccacacaaagaagactaaattgatcacctt |
7711264 |
T |
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| Q |
316 |
caaaatgaactcaaaaaagggtttcttg |
343 |
Q |
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| T |
7711265 |
caaaatgaactcaaaaaagggtctcttg |
7711292 |
T |
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