View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2697_high_36 (Length: 283)
Name: NF2697_high_36
Description: NF2697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2697_high_36 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 11 - 283
Target Start/End: Complemental strand, 13137863 - 13137591
Alignment:
| Q |
11 |
caaaggggttgggagtgattatcttcatggagggatagagggtattgcaaattcgggggtatacaaatcttgtataagtgttaaacaagattacattata |
110 |
Q |
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| T |
13137863 |
caaaagggttgggagtgattatcttcatggagggatagagggtattgcaaattcgggggtatacaaatcttgtataagtgttaaacaagattacattata |
13137764 |
T |
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| Q |
111 |
gagaccactattgtttcatatgataattcatacactgacaannnnnnngttctacaaatgaagaaaaagaaaaaccatgccaatgcttacatggtgacta |
210 |
Q |
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| T |
13137763 |
gagaccactattgtttcatatgataattcatacactgacaatttttttgttctacaaatgaagaaaaagaaaaaccatgccaatgcttacatggtgacta |
13137664 |
T |
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| Q |
211 |
tggcacactattatgttaccaactttgctggtctttcttctgcagcaaaaatataccgtagtagaggaaaagg |
283 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13137663 |
tggcacactattatgttaccaactttgctggtctttcttctgcagcaaaaatataccgtagtagaggaaaagg |
13137591 |
T |
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