View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2697_high_55 (Length: 229)
Name: NF2697_high_55
Description: NF2697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2697_high_55 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 14 - 229
Target Start/End: Original strand, 33987015 - 33987230
Alignment:
| Q |
14 |
aatacttatccctaatccctatgatttggtttatattttcccacgttactttccctgcttattggacattaatcttacatactaatgaaaccaagataat |
113 |
Q |
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| T |
33987015 |
aatacttatccctaatccctatgatacggtttatattttcccacgttactttccctgcttattggacattaatcttacatactaatgaaaccaagataat |
33987114 |
T |
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| Q |
114 |
aataaataaatgaaactatagtcaaaactcttgatgcaaattagtattttaatcatagacagttgaataagtaatccagagaagcgacagctgcacagaa |
213 |
Q |
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| T |
33987115 |
actaaataaatgaaactatagtcaaaactcttgatgcaaattagtattttaatcatagacagttgaataagtaatccagagaagcgacagctgcacagaa |
33987214 |
T |
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| Q |
214 |
tgttaatacacatata |
229 |
Q |
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|||||||||||||||| |
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| T |
33987215 |
tgttaatacacatata |
33987230 |
T |
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