View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2697_low_37 (Length: 292)

Name: NF2697_low_37
Description: NF2697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2697_low_37
NF2697_low_37
[»] chr8 (7 HSPs)
chr8 (1-292)||(43907881-43908172)
chr8 (191-283)||(34563137-34563229)
chr8 (187-289)||(4558681-4558783)
chr8 (186-280)||(44865659-44865753)
chr8 (186-292)||(29699136-29699242)
chr8 (187-239)||(773169-773221)
chr8 (228-292)||(40280287-40280351)
[»] chr2 (7 HSPs)
chr2 (191-289)||(31461325-31461423)
chr2 (187-292)||(33197321-33197426)
chr2 (187-262)||(11393478-11393553)
chr2 (187-262)||(11410139-11410214)
chr2 (255-292)||(42457899-42457936)
chr2 (187-283)||(3102576-3102672)
chr2 (219-283)||(28803597-28803661)
[»] chr7 (4 HSPs)
chr7 (188-279)||(6552365-6552456)
chr7 (234-292)||(21853198-21853256)
chr7 (187-240)||(5630049-5630102)
chr7 (187-235)||(8680878-8680926)
[»] chr6 (3 HSPs)
chr6 (187-283)||(5328857-5328953)
chr6 (251-292)||(10728579-10728620)
chr6 (212-289)||(10749313-10749389)
[»] chr3 (4 HSPs)
chr3 (187-283)||(54775011-54775107)
chr3 (187-241)||(20874433-20874487)
chr3 (251-292)||(849609-849650)
chr3 (213-281)||(16790181-16790249)
[»] chr1 (7 HSPs)
chr1 (187-231)||(21516256-21516300)
chr1 (186-292)||(17269133-17269238)
chr1 (191-241)||(24153164-24153214)
chr1 (219-289)||(45234112-45234182)
chr1 (191-235)||(37236-37280)
chr1 (256-292)||(15477530-15477566)
chr1 (201-241)||(36602687-36602727)
[»] scaffold0590 (1 HSPs)
scaffold0590 (189-283)||(1165-1259)
[»] scaffold0275 (1 HSPs)
scaffold0275 (189-283)||(2716-2810)
[»] chr5 (2 HSPs)
chr5 (187-292)||(9202830-9202935)
chr5 (187-281)||(26516181-26516275)
[»] scaffold0024 (1 HSPs)
scaffold0024 (187-292)||(27459-27564)
[»] chr4 (1 HSPs)
chr4 (187-240)||(4684243-4684296)


Alignment Details
Target: chr8 (Bit Score: 288; Significance: 1e-161; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 1 - 292
Target Start/End: Complemental strand, 43908172 - 43907881
Alignment:
Q  1 ccataatgagtgaaattaaaaatcttcaattagtatttttggatcaatcaatttagtcttgaagtcctaaagtacaaatgtgattgaggatcattttaga 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43908172 ccataatgagtgaaattaaaaatcttcaattagtatttttggatcaatcaatttagtcttgaagtcctaaagtacaaatgtgattgaggatcattttaga 43908073  T
Q  101 atttcgttaatttcaagactaaactctctaatcattacaatttcatgactaaatcagtgtttcactatagtaccatatagagatcatttggataaacatc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43908072 atttcgttaatttcaagactaaactctctaatcattacaatttcatgactaaatcagtgtttcactatagtaccatatagagatcatttggataaacatc 43907973  T
Q  201 ttaattaaacccttatatcataaatgtttatcatataagtggttacatacaagttatttctagcgtaaaagataaaataaagttaaattgtt 292  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  43907972 ttaattaaacccttatatcataaatgtttatcatataagtggttacatacaagttatttctagcgtaaaagataaaataaagtcaaattgtt 43907881  T

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Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 191 - 283
Target Start/End: Original strand, 34563137 - 34563229
Alignment:
Q  191 gataaacatcttaattaaacccttatatcataaatgtttatcatataagtggttacatacaagttatttctagcgtaaaagataaaataaagt 283  Q
    |||||||| ||||||||||| |||||| ||||||  ||||||||||||||| ||| ||| ||||||||||||    ||| |||||||||||||    
T  34563137 gataaacaacttaattaaacgcttatagcataaacatttatcatataagtgcttatatataagttatttctatgacaaaggataaaataaagt 34563229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 187 - 289
Target Start/End: Original strand, 4558681 - 4558783
Alignment:
Q  187 tttggataaacatcttaattaaacccttatatcataaatgtttatcatataagtggttacatacaagttatttctagcgtaaaagataaaataaagttaa 286  Q
    |||||||||||| ||||||||  | |||||| |||||| |||||| || |||||| |||  || ||| ||||||||   |||||||||||||||||||||    
T  4558681 tttggataaacaacttaattacgcgcttatagcataaacgtttattatgtaagtgtttatgtataagctatttctataataaaagataaaataaagttaa 4558780  T
Q  287 att 289  Q
    |||    
T  4558781 att 4558783  T

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Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 186 - 280
Target Start/End: Complemental strand, 44865753 - 44865659
Alignment:
Q  186 atttggataaacatcttaattaaacccttatatcataaatgtttatcatataagtggttacatacaagttatttctagcgtaaaagataaaataa 280  Q
    ||||||||||||| ||||||||||  |||||| ||| || ||||||| |||||||| |||| || ||| |||||||| || ||||||| ||||||    
T  44865753 atttggataaacaacttaattaaatgcttatagcattaaagtttatcttataagtgcttacttataagctatttctatcgcaaaagattaaataa 44865659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 186 - 292
Target Start/End: Original strand, 29699136 - 29699242
Alignment:
Q  186 atttggataaacatcttaattaaacccttatatcataaatgtttatcatataagtggttacatacaagttatttctagcgtaaaagataaaataaagtta 285  Q
    ||||||||||||  |||| ||||   |||||| ||||||| |||||||||||| || |||  |||||||||||||||    ||||||||||||||||| |    
T  29699136 atttggataaacgacttagttaagtgcttatagcataaatatttatcatataaatgcttatgtacaagttatttctataacaaaagataaaataaagtca 29699235  T
Q  286 aattgtt 292  Q
    || ||||    
T  29699236 aaatgtt 29699242  T

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Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 239
Target Start/End: Original strand, 773169 - 773221
Alignment:
Q  187 tttggataaacatcttaattaaacccttatatcataaatgtttatcatataag 239  Q
    |||||||||||| ||| ||| ||| |||||| |||||||||||||||| ||||    
T  773169 tttggataaacaactttattcaacacttatagcataaatgtttatcatctaag 773221  T

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Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 292
Target Start/End: Complemental strand, 40280351 - 40280287
Alignment:
Q  228 ttatcatataagtggttacatacaagttatttctagcgtaaaagataaaataaagttaaattgtt 292  Q
    ||||||||||||||  || ||| ||||||||||||    ||||||||||||||||| ||||||||    
T  40280351 ttatcatataagtgcctatatataagttatttctacaacaaaagataaaataaagtaaaattgtt 40280287  T

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Target: chr2 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 191 - 289
Target Start/End: Original strand, 31461325 - 31461423
Alignment:
Q  191 gataaacatcttaattaaacccttatatcataaatgtttatcatataagtggttacatacaagttatttctagcgtaaaagataaaataaagttaaatt 289  Q
    |||||||| ||||||||| | ||| || |||||| || ||||||||||||||||| ||| ||| ||||||||    ||||||||||||||||| |||||    
T  31461325 gataaacaacttaattaagcacttctagcataaacgtatatcatataagtggttatatataagctatttctataacaaaagataaaataaagtcaaatt 31461423  T

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Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 187 - 292
Target Start/End: Complemental strand, 33197426 - 33197321
Alignment:
Q  187 tttggataaacatcttaattaaacccttatatcataaatgtttatcatataagtggttacatacaagttatttctagcgtaaaagataaaataaagttaa 286  Q
    |||||||||||| || |||||||| |||||| |||||| | |||||||||||||| |||  || ||| ||||||||    |||||||| |||||||| ||    
T  33197426 tttggataaacaactaaattaaacacttataacataaacgcttatcatataagtgcttatctataagctatttctataacaaaagatagaataaagtcaa 33197327  T
Q  287 attgtt 292  Q
     |||||    
T  33197326 gttgtt 33197321  T

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Target: chr2; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 262
Target Start/End: Complemental strand, 11393553 - 11393478
Alignment:
Q  187 tttggataaacatcttaattaaacccttatatcataaatgtttatcatataagtggttacatacaagttatttcta 262  Q
    |||||||||||| ||||||||| | |||||| || || ||||||||||||||||| |||  || ||| ||||||||    
T  11393553 tttggataaacagcttaattaagcacttatagcacaagtgtttatcatataagtgcttatctataagctatttcta 11393478  T

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Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 187 - 262
Target Start/End: Complemental strand, 11410214 - 11410139
Alignment:
Q  187 tttggataaacatcttaattaaacccttatatcataaatgtttatcatataagtggttacatacaagttatttcta 262  Q
    |||||||||||| ||||||||| | |||||| || || ||||||||||||||||| |||  || ||| ||||||||    
T  11410214 tttggataaacagcttaattaagcacttatagcacaagtgtttatcatataagtgcttatctataagctatttcta 11410139  T

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Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 292
Target Start/End: Original strand, 42457899 - 42457936
Alignment:
Q  255 tatttctagcgtaaaagataaaataaagttaaattgtt 292  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  42457899 tatttctatagtaaaagataaaataaagttaaattgtt 42457936  T

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Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 283
Target Start/End: Original strand, 3102576 - 3102672
Alignment:
Q  187 tttggataaacatcttaattaaacccttatatcataaatgtttatcatataagtggttacatacaagttatttctagcgtaaaagataaaataaagt 283  Q
    |||||||||||| ||| ||||| | |||| | |||||||||||||||||||| || |||  || ||| ||||| ||  | |||| ||||||||||||    
T  3102576 tttggataaacagctttattaagcgcttaaaacataaatgtttatcatataactgcttatgtataagctatttttatagcaaaatataaaataaagt 3102672  T

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Target: chr2; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 283
Target Start/End: Complemental strand, 28803661 - 28803597
Alignment:
Q  219 cataaatgtttatcatataagtggttacatacaagttatttctagcgtaaaagataaaataaagt 283  Q
    |||||||| |||||||||||||| ||| ||| |||||||||| |    |||||||||||||||||    
T  28803661 cataaatgcttatcatataagtgcttatatataagttatttcgataacaaaagataaaataaagt 28803597  T

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Target: chr7 (Bit Score: 36; Significance: 0.00000000003; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 279
Target Start/End: Complemental strand, 6552456 - 6552365
Alignment:
Q  188 ttggataaacatcttaattaaacccttatatcataaatgtttatcatataagtggttacatacaagttatttctagcgtaaaagataaaata 279  Q
    |||||||| || ||||||||||| |||| ||||||| |  |||||||||||||| |||  |||||||||||||||    |||||||||||||    
T  6552456 ttggataagcaacttaattaaacacttaaatcataagtacttatcatataagtgcttatgtacaagttatttctacaacaaaagataaaata 6552365  T

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Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 292
Target Start/End: Complemental strand, 21853256 - 21853198
Alignment:
Q  234 tataagtggttacatacaagttatttctagcgtaaaagataaaataaagttaaattgtt 292  Q
    |||||||| ||| ||| ||||||||||||    ||||||||||||||||||||||||||    
T  21853256 tataagtgattatatataagttatttctattacaaaagataaaataaagttaaattgtt 21853198  T

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Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 5630102 - 5630049
Alignment:
Q  187 tttggataaacatcttaattaaacccttatatcataaatgtttatcatataagt 240  Q
    |||||||||||| |||||||||  |||||||  |||| ||||||||||||||||    
T  5630102 tttggataaacaacttaattaagtccttatagaataagtgtttatcatataagt 5630049  T

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Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 8680878 - 8680926
Alignment:
Q  187 tttggataaacatcttaattaaacccttatatcataaatgtttatcata 235  Q
    |||||||||||| || |||||||| |||||| |||| ||||||||||||    
T  8680878 tttggataaacagctcaattaaacacttatagcatagatgtttatcata 8680926  T

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Target: chr6 (Bit Score: 33; Significance: 0.000000002; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 283
Target Start/End: Original strand, 5328857 - 5328953
Alignment:
Q  187 tttggataaacatcttaattaaacccttatatcataaatgtttatcatataagtggttacatacaagttatttctagcgtaaaagataaaataaagt 283  Q
    |||| ||||||| ||||||||| | | |||| |||||||| |||||||| ||||| |||| |  ||||||||||||    |||||||||||||||||    
T  5328857 tttgaataaacagcttaattaaccacatatagcataaatgattatcataaaagtgcttacgtttaagttatttctataacaaaagataaaataaagt 5328953  T

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Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 292
Target Start/End: Original strand, 10728579 - 10728620
Alignment:
Q  251 aagttatttctagcgtaaaagataaaataaagttaaattgtt 292  Q
    ||||||||||||  | ||||||||||||||||||||||||||    
T  10728579 aagttatttctaaagcaaaagataaaataaagttaaattgtt 10728620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 289
Target Start/End: Complemental strand, 10749389 - 10749313
Alignment:
Q  212 cttatatcataaatgtttatcatataagtggttacatacaagttatttctagcgtaaaagataaaataaagttaaatt 289  Q
    ||||||||||||  ||||||||||||||  ||||  || |||| |||||||   ||||||||||||||||||||||||    
T  10749389 cttatatcataagcgtttatcatataagatgttatgtataagt-atttctataataaaagataaaataaagttaaatt 10749313  T

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Target: chr3 (Bit Score: 33; Significance: 0.000000002; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 283
Target Start/End: Original strand, 54775011 - 54775107
Alignment:
Q  187 tttggataaacatcttaattaaacccttatatcataaatgtttatcatataagtggttacatacaagttatttctagcgtaaaagataaaataaagt 283  Q
    |||| ||||||| ||||||||| | | |||| |||||||| |||||||| ||||| |||| |  ||||||||||||    |||||||||||||||||    
T  54775011 tttgaataaacagcttaattaaccacatatagcataaatgattatcataaaagtgcttacgtttaagttatttctataacaaaagataaaataaagt 54775107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 241
Target Start/End: Complemental strand, 20874487 - 20874433
Alignment:
Q  187 tttggataaacatcttaattaaacccttatatcataaatgtttatcatataagtg 241  Q
    |||||||||||| ||||||||| | |||||| ||||||||  |||||||||||||    
T  20874487 tttggataaacaacttaattaagcacttatagcataaatgcatatcatataagtg 20874433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 292
Target Start/End: Original strand, 849609 - 849650
Alignment:
Q  251 aagttatttctagcgtaaaagataaaataaagttaaattgtt 292  Q
    |||| ||||||| || ||||||||||||||||||||||||||    
T  849609 aagtcatttctatcggaaaagataaaataaagttaaattgtt 849650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 213 - 281
Target Start/End: Complemental strand, 16790249 - 16790181
Alignment:
Q  213 ttatatcataaatgtttatcatataagtggttacatacaagttatttctagcgtaaaagataaaataaa 281  Q
    ||||| |||||  |||||||||||||||| ||| ||| ||||||||||||    |||||||||||||||    
T  16790249 ttatagcataagcgtttatcatataagtgcttatatataagttatttctataacaaaagataaaataaa 16790181  T

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Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 231
Target Start/End: Original strand, 21516256 - 21516300
Alignment:
Q  187 tttggataaacatcttaattaaacccttatatcataaatgtttat 231  Q
    |||||||||||| ||||||||||| |||||| |||||||||||||    
T  21516256 tttggataaacaacttaattaaacgcttataacataaatgtttat 21516300  T

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Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 186 - 292
Target Start/End: Original strand, 17269133 - 17269238
Alignment:
Q  186 atttggataaacatcttaattaaacccttatatcataaatgtttatcatataagtggttacatacaagttatttctagcgtaaaagataaaataaagtta 285  Q
    |||||||||| || ||| ||||||  || |||||||||| |||| ||||||||||| |||  || |||||||||||||   |||||  |||||||||| |    
T  17269133 atttggataagcaacttgattaaatactgatatcataaacgttt-tcatataagtgcttatgtataagttatttctagaacaaaagtgaaaataaagtca 17269231  T
Q  286 aattgtt 292  Q
    |||||||    
T  17269232 aattgtt 17269238  T

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Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 24153164 - 24153214
Alignment:
Q  191 gataaacatcttaattaaacccttatatcataaatgtttatcatataagtg 241  Q
    |||||||| ||||||||||| |||||| |||| ||||||||||||| ||||    
T  24153164 gataaacaacttaattaaacacttataacatatatgtttatcatatgagtg 24153214  T

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Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 219 - 289
Target Start/End: Original strand, 45234112 - 45234182
Alignment:
Q  219 cataaatgtttatcatataagtggttacatacaagttatttctagcgtaaaagataaaataaagttaaatt 289  Q
    |||||||||||||||||| |||| ||   |||| ||||||||||   |||||||||||||||||| |||||    
T  45234112 cataaatgtttatcatatgagtgcttttgtacatgttatttctataataaaagataaaataaagtcaaatt 45234182  T

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Target: chr1; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 235
Target Start/End: Original strand, 37236 - 37280
Alignment:
Q  191 gataaacatcttaattaaacccttatatcataaatgtttatcata 235  Q
    |||||||| ||||||||||  |||||| |||||||||||||||||    
T  37236 gataaacagcttaattaaatgcttataacataaatgtttatcata 37280  T

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Target: chr1; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 292
Target Start/End: Original strand, 15477530 - 15477566
Alignment:
Q  256 atttctagcgtaaaagataaaataaagttaaattgtt 292  Q
    |||||||  ||||||||||||||||||||||||||||    
T  15477530 atttctatagtaaaagataaaataaagttaaattgtt 15477566  T

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Target: chr1; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 241
Target Start/End: Original strand, 36602687 - 36602727
Alignment:
Q  201 ttaattaaacccttatatcataaatgtttatcatataagtg 241  Q
    |||||||| | |||||||||||||| |||||||||||||||    
T  36602687 ttaattaagcacttatatcataaatttttatcatataagtg 36602727  T

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Target: scaffold0590 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0590
Description:

Target: scaffold0590; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 283
Target Start/End: Complemental strand, 1259 - 1165
Alignment:
Q  189 tggataaacatcttaattaaacccttatatcataaatgtttatcatataagtggttacatacaagttatttctagcgtaaaagataaaataaagt 283  Q
    |||||||||| |||||||||   |||||| |||||| || ||||||||||||| |||  || ||| ||||||||    |||||||||||||||||    
T  1259 tggataaacaacttaattaagtacttatagcataaacgtctatcatataagtgcttatgtataagctatttctataacaaaagataaaataaagt 1165  T

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Target: scaffold0275 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0275
Description:

Target: scaffold0275; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 283
Target Start/End: Original strand, 2716 - 2810
Alignment:
Q  189 tggataaacatcttaattaaacccttatatcataaatgtttatcatataagtggttacatacaagttatttctagcgtaaaagataaaataaagt 283  Q
    |||||||||| |||||||||   |||||| |||||| || ||||||||||||| |||  || ||| ||||||||    |||||||||||||||||    
T  2716 tggataaacaacttaattaagtacttatagcataaacgtctatcatataagtgcttatgtataagctatttctataacaaaagataaaataaagt 2810  T

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Target: chr5 (Bit Score: 31; Significance: 0.00000003; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 292
Target Start/End: Complemental strand, 9202935 - 9202830
Alignment:
Q  187 tttggataaacatcttaattaaacccttatatcataaatgtttatcat-ataagtggttacatacaagttatttctagcgtaaaagataaaataaagtta 285  Q
    ||||||||||||||||| ||  |  |||||| || || |||||||||| ||||||| ||| ||| ||| |||||||   | |||||||||||||||||||    
T  9202935 tttggataaacatcttatttgca-gcttatagcacaagtgtttatcatgataagtgcttatatataagctatttctgtagcaaaagataaaataaagtta 9202837  T
Q  286 aattgtt 292  Q
    |||||||    
T  9202836 aattgtt 9202830  T

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Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 281
Target Start/End: Original strand, 26516181 - 26516275
Alignment:
Q  187 tttggataaacatcttaattaaacccttatatcataaatgtttatcatataagtggttacatacaagttatttctagcgtaaaagataaaataaa 281  Q
    |||||||||||| ||||||||| | |||||| |||||  | |||||||||||||| |||  || ||| ||||||||    |||||||||||||||    
T  26516181 tttggataaacaacttaattaagcgcttatagcataagcgcttatcatataagtgcttatgtataagctatttctaaaacaaaagataaaataaa 26516275  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 292
Target Start/End: Original strand, 27459 - 27564
Alignment:
Q  187 tttggataaacatcttaattaaacccttatatcataaatgtttatcatataagtggttacatacaagttatttctagcgtaaaagataaaataaagttaa 286  Q
    |||||||||||| ||||| ||||| |||||| |||||    ||||||| |||||| |||  || ||||||||||||    | ||||||||||||||| ||    
T  27459 tttggataaacaacttaaataaacgcttatagcataagctcttatcatgtaagtgcttatgtataagttatttctataacagaagataaaataaagtcaa 27558  T
Q  287 attgtt 292  Q
    ||||||    
T  27559 attgtt 27564  T

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Target: chr4 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 4684296 - 4684243
Alignment:
Q  187 tttggataaacatcttaattaaacccttatatcataaatgtttatcatataagt 240  Q
    |||||||||| | ||||||||| | ||| |||||||| ||||||||||||||||    
T  4684296 tttggataaatagcttaattaagcacttctatcataagtgtttatcatataagt 4684243  T

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